Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0000197

Physical Location & Seq

Genomic Coordinates Reverse (-)

23841435 .. 23844940

Gene Structure 3506 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1163400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGGCTTCCAATGGAATCCCCTTCACCAGAGCAACCGCAAGAGGCATATTACTGCCAGTGGGATTCCGATTCCACCCCACAGAAGAAGAGCTGATCGGCCATTACTTGCAGTTGAAGCTCCGGGGAGAGGATTCCCTCGTCAGCGACGTCATCCGTGAAATCAATATCTGCAAACACGAGCCCTGGGACTTGCCTGCTAAGTCATTGATAAAGTCGGATGATGAGGAATGGTACTTCTACAACCGACCAATTTACAAAAATAACAGCAGACACGACATCGAAAGGGCGACAAGCACAGGCTTCTGGAAGATCACTGGCCGGGATAAAATAGTCACGGCTCGAGACAACAAAACTATCGGTAAAAAGAGGATTCTGACATTTTACCGAGGTCGCCCTCGTCAAGCCCAAATTACCCCCTGGGTCATGCATGAGTTTTACATCCCTCAAAGGGATTTCGTTCTCTGTCACGTAAAGAAGAAATCAGGTAAGAATACGGATGTTTCAACCTGTGATGAAGGTGAATCTAGTAATTACAACAATGCACATGACTTTGAAAATCAACTGCAACCAGCACATAATATGCATGTTGAAGAGGAACGTACTCAGCCACCACCAAATCCGGACATTTTTCAGAGGCATATGGGCAGTATGCTTGCAAATGCGCATGATAATAATGATTACCATGGAACGCAATCTGCACCTGGAGCTAATGAATCGGATGGAGATTCAGAAGAGTTCGTAAATACAGTTATTGTTGACCCGTATGAGGCTTTCAGTGAACAAATAACTCACGCTAACGTCTTAAATAACTCCACTCTGCCACAGTCACCTAGGAAGGTGTATTTAAAGGATTGTGGAGTAAGCAGTGGCTCAGCCACAGAAGTACAACATGCAGTTGAACTTGAAGAGGGCCAGTCCCGGGGCGGGAAAGGTGTTACGCTTCGTAACCGGATCTTAATACAGGCTGCTTCCTCTACCAATGTATTACCTAAACCTCAGACTGATCGTCTTCAATCAGTCAGTGATGAAGATTCTGGTGCATCAAGACCCATTAAAAAGAGTGCTTCCTCTGTGGATGTAGATGCAGATAGCCTTCAGATTAACTCTATTCAGTTAGCCTCCGACGAATACTATAACAATGAGAGAAGAACATATTCAACAAGTGCCCTCTTAGCACCAGGCAAACCTAATGAATTAGAACAGCAGCAAAGCAAGGCCAAAGTAGCTGCAGAGCGTCGAGCTGCTGTTGATTTTCCCCCGAAGAGGAACTTTATAACAGAATCTAACAAAGACGCAGAGGCGGTTCAAGGCAATAATACAGAAAAGGGTTTGAAGCAGACACACAATGCAACCACCGCCGGCAATTGGATGAGCTGTTCTTTCATTTCCTGGGAAACTTTCCCCCCATTAACAAGTCCCCCATCAGTATACCTTTTCAACACGGTTCTAGGTGCGATATTGTTCTTTGTTTTTGCTTGGGAAGTAGTTTTATATGGGCAGTGGTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016020 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071944 GO:0080090 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

503

Amino Acids

56.41

Weight (kDa)

5.96

Isoelectric Point (pI)

51.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	19 - 146	5.8e-36	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000197)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g18010 FvH4_7g18010 FvH4_7g18021 FvH4_7g18070 FvH4_7g18070 FvH4_7g18200 FvH4_7g18250
malus_domestica	MD01G1092200.v1.1 MD01G1092500.v1.1 MD01G1092600.v1.1 MD01G1092900.v1.1 MD01G1093000.v1.1 MD01G1093200.v1.1 MD01G1093500.v1.1 MD01G1093700.v1.1 MD01G1093800.v1.1 MD01G1093900.v1.1 MD01G1094000.v1.1 MD01G1094200.v1.1 MD01G1094400.v1.1 MD01G1094500.v1.1 MD01G1094700.v1.1 MD01G1094800.v1.1 MD01G1095100.v1.1 MD07G1162700.v1.1 MD07G1163200.v1.1 MD07G1163400.v1.1 MD07G1163700.v1.1 MD07G1164000.v1.1 MD10G1186100.v1.1
prunus_persica	Prupe.2G201200_v2.0.a1 Prupe.2G201200_v2.0.a1 Prupe.2G201300_v2.0.a1 Prupe.2G201800_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202800_v2.0.a1 Prupe.2G202900_v2.0.a1 Prupe.2G203000_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204900_v2.0.a1
pyrus_communis	pycom01g11610 pycom01g11650 pycom01g11670 pycom01g11680 pycom01g11700 pycom01g11710 pycom01g11720 pycom01g11730 pycom07g15770 pycom07g15860 pycom07g15870 pycom07g15890 pycom07g15900 pycom07g15920
rosa_chinensis	RchiOBHm_Chr1g0333731 RchiOBHm_Chr1g0361411 RchiOBHm_Chr1g0361501 RchiOBHm_Chr1g0361551 RchiOBHm_Chr1g0361631 RchiOBHm_Chr1g0361691 RchiOBHm_Chr1g0361701
rosa_laevigata	RLG00000011640 RLG00000014882 RLG00000027709 RLG00000027713 RLG00000027717 RLG00000027719 RLG00000029532 RLG00000030171 RLG00000030174 RLG00000030177 RLG00000030181 RLG00000030186
rosa_multiflora	Rmu_co8135790.1_g000001 Rmu_co8371689.1_g000001 Rmu_co8391943.1_g000001 Rmu_co8469521.1_g000001 Rmu_co8502503.1_g000002 Rmu_sc0001034.1_g000001 Rmu_sc0002119.1_g000002 Rmu_sc0002119.1_g000009 Rmu_sc0002119.1_g000019 Rmu_sc0003426.1_g000005 Rmu_sc0003693.1_g000010 Rmu_sc0003704.1_g000007 Rmu_sc0006101.1_g000005 Rmu_sc0006417.1_g000006 Rmu_sc0007217.1_g000012 Rmu_sc0010384.1_g000001 Rmu_sc0011258.1_g000003 Rmu_sc0017253.1_g000002 Rmu_ssc0000062.1_g000022
rosa_roxburghii	Rroxscaffold_159G00432930 Rroxscaffold_159G00433040 Rroxscaffold_159G00433060 Rroxscaffold_4G00294780 Rroxscaffold_4G00294810 Rroxscaffold_4G00294870 Rroxscaffold_4G00294930 Rroxscaffold_4G00294950 Rroxscaffold_4G00317240 Rroxscaffold_4G00325190 Rroxscaffold_4G00325210
rosa_rugosa	Rorug01G0047400 Rorug01G0047800 Rorug01G0048100 Rorug01G0048100 Rorug01G0111500 Rorug01G0111500 Rorug01G0289800 Rorug01G0290300 Rorug01G0290700 Rorug01G0290900
rosa_samantha	Rh1AG063000 Rh1AG064000 Rh1AG064400 Rh1AG133700 Rh1AG300300 Rh1AG300900 Rh1AG301000 Rh1AG301100 Rh1BG263800 Rh1BG264000 Rh1BG264100 Rh1CG281800 Rh1CG282100 Rh1CG282200 Rh1DG294000 Rh1DG294100 Rh5BG200600
rosa_wichuraiana	Rw1G005400 Rw1G011170 Rw1G026570 Rw1G026580 Rw1G026610 Rw1G026640 Rw1G026670 Rw1G026700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1274
AatII	GACGTC	1 cut(s)	150
Acc16I	TGCGCA	1 cut(s)	663
AccI	GTMKAC	1 cut(s)	1428
AccIII	TCCGGA	1 cut(s)	619
AciI	CCGC	4 cut(s)	36, 924, 1301, 1356
AclWI	GGATC	1 cut(s)	959
AcoI	YGGCCR	2 cut(s)	97, 316
AcuI	CTGAAG	1 cut(s)	1079
AcyI	GRCGYC	1 cut(s)	147
AfaI	GTAC	3 cut(s)	233, 601, 885
AfiI	CCNNNNNNNGG	7 cut(s)	127, 448, 766, 919, 924, 1263, 1365
AhdI	GACNNNNNGTC	1 cut(s)	1005
AjnI	CCWGG	5 cut(s)	182, 416, 700, 1177, 1388
AloI	GAACNNNNNNTCC	2 cut(s)	1360, 1392
AluBI	AGCT	6 cut(s)	91, 118, 707, 1226, 1241, 1374
AluI	AGCT	6 cut(s)	91, 118, 707, 1226, 1241, 1374
Alw26I	GTCTC	1 cut(s)	336
AlwI	GGATC	1 cut(s)	959
Ama87I	CYCGRG	2 cut(s)	339, 918
Aor13HI	TCCGGA	1 cut(s)	619
AoxI	GGCC	4 cut(s)	97, 316, 910, 1215
ApeKI	GCWGC	4 cut(s)	965, 1204, 1226, 1241
Asp700I	GAANNNNTTC	1 cut(s)	1153
AspA2I	CCTAGG	1 cut(s)	830
AspLEI	GCGC	1 cut(s)	664
AspS9I	GGNCC	1 cut(s)	910
AsuC2I	CCSGG	4 cut(s)	122, 320, 919, 920
AsuHPI	GGTGA	3 cut(s)	16, 530, 819
AvaI	CYCGRG	2 cut(s)	339, 918
AvrII	CCTAGG	1 cut(s)	830
BaeGI	GKGCMC	1 cut(s)	1168
BanII	GRGCYC	1 cut(s)	183
BauI	CACGAG	1 cut(s)	176
BbsI	GAAGAC	1 cut(s)	1001
BbvI	GCAGC	4 cut(s)	952, 1213, 1216, 1228
BccI	CCATC	2 cut(s)	713, 1429
BceAI	ACGGC	1 cut(s)	351
BciT130I	CCWGG	5 cut(s)	184, 418, 702, 1179, 1390
BcnI	CCSGG	4 cut(s)	122, 320, 919, 920
BcoDI	GTCTC	1 cut(s)	336
BfaI	CTAG	4 cut(s)	525, 831, 1448, 1507
BfmI	CTRYAG	1 cut(s)	1227
BisI	GCNGC	4 cut(s)	966, 1205, 1227, 1242
BlnI	CCTAGG	1 cut(s)	830
BlpI	GCTNAGC	1 cut(s)	871
BlsI	GCNGC	4 cut(s)	967, 1206, 1228, 1243
Bme1390I	CCNGG	9 cut(s)	122, 184, 320, 418, 702, 919, 920, 1179, 1390
BmeRI	GACNNNNNGTC	1 cut(s)	1005
BmeT110I	CYCGRG	2 cut(s)	339, 918
BmgT120I	GGNCC	1 cut(s)	910
BmrFI	CCNGG	9 cut(s)	122, 184, 320, 418, 702, 919, 920, 1179, 1390
BmsI	GCATC	2 cut(s)	1049, 1072
BpiI	GAAGAC	1 cut(s)	1001
BpmI	CTGGAG	1 cut(s)	723
Bpu1102I	GCTNAGC	1 cut(s)	871
BpuMI	CCSGG	4 cut(s)	122, 320, 919, 920
BsaAI	YACGTR	1 cut(s)	469
BsaHI	GRCGYC	1 cut(s)	147
BsaWI	WCCGGW	2 cut(s)	619, 948
Bsc4I	CCNNNNNNNGG	7 cut(s)	127, 448, 766, 919, 924, 1263, 1365
Bse118I	RCCGGY	1 cut(s)	1358
Bse1I	ACTGG	3 cut(s)	56, 319, 913
BseAI	TCCGGA	1 cut(s)	619
BseBI	CCWGG	5 cut(s)	184, 418, 702, 1179, 1390
BseGI	GGATG	7 cut(s)	150, 223, 438, 502, 724, 1081, 1374
BseLI	CCNNNNNNNGG	7 cut(s)	127, 448, 766, 919, 924, 1263, 1365
BseMII	CTCAG	3 cut(s)	617, 885, 1010
BseNI	ACTGG	3 cut(s)	56, 319, 913
BseSI	GKGCMC	1 cut(s)	1168
BseXI	GCAGC	4 cut(s)	952, 1213, 1216, 1228
BsgI	GTGCAG	1 cut(s)	681
BshFI	GGCC	4 cut(s)	99, 318, 912, 1217
BsiHKCI	CYCGRG	2 cut(s)	339, 918
BsiSI	CCGG	6 cut(s)	121, 319, 620, 919, 949, 1359
BslFI	GGGAC	3 cut(s)	200, 901, 1401
BslI	CCNNNNNNNGG	7 cut(s)	127, 448, 766, 919, 924, 1263, 1365
BsmAI	GTCTC	1 cut(s)	336
BsmFI	GGGAC	3 cut(s)	200, 901, 1401
BsnI	GGCC	4 cut(s)	99, 318, 912, 1217
BsoBI	CYCGRG	2 cut(s)	339, 918
Bsp1286I	GDGCHC	2 cut(s)	183, 1168
Bsp13I	TCCGGA	1 cut(s)	619
Bsp143I	GATC	4 cut(s)	93, 309, 951, 1003
Bsp1720I	GCTNAGC	1 cut(s)	871
Bsp19I	CCATGG	1 cut(s)	682
BspACI	CCGC	4 cut(s)	36, 924, 1301, 1356
BspANI	GGCC	4 cut(s)	99, 318, 912, 1217
BspCNI	CTCAG	3 cut(s)	616, 884, 1009
BspEI	TCCGGA	1 cut(s)	619
BspMAI	CTGCAG	1 cut(s)	1231
BspPI	GGATC	1 cut(s)	959
BspQI	GCTCTTC	1 cut(s)	81
BsrFI	RCCGGY	1 cut(s)	1358
BsrI	ACTGG	3 cut(s)	56, 319, 913
BssAI	RCCGGY	1 cut(s)	1358
BssMI	GATC	4 cut(s)	93, 309, 951, 1003
BssNAI	GTATAC	1 cut(s)	1429
BssNI	GRCGYC	1 cut(s)	147
BssSI	CACGAG	1 cut(s)	176
BssT1I	CCWWGG	2 cut(s)	682, 830
Bst1107I	GTATAC	1 cut(s)	1429
Bst2BI	CACGAG	1 cut(s)	176
Bst2UI	CCWGG	5 cut(s)	184, 418, 702, 1179, 1390
Bst4CI	ACNGT	3 cut(s)	748, 825, 1444
Bst6I	CTCTTC	5 cut(s)	81, 585, 726, 900, 1256
BstACI	GRCGYC	1 cut(s)	147
BstBAI	YACGTR	1 cut(s)	469
BstC8I	GCNNGC	3 cut(s)	195, 654, 1360
BstDEI	CTNAG	5 cut(s)	198, 603, 871, 996, 1171
BstDSI	CCRYGG	1 cut(s)	682
BstF5I	GGATG	7 cut(s)	150, 223, 438, 502, 724, 1081, 1374
BstHHI	GCGC	1 cut(s)	664
BstKTI	GATC	4 cut(s)	96, 312, 954, 1006
BstMAI	GTCTC	1 cut(s)	336
BstMBI	GATC	4 cut(s)	93, 309, 951, 1003
BstMWI	GCNNNNNNNGC	5 cut(s)	115, 704, 1172, 1223, 1355
BstNI	CCWGG	5 cut(s)	184, 418, 702, 1179, 1390
BstNSI	RCATGY	2 cut(s)	587, 893
BstSCI	CCNGG	9 cut(s)	120, 182, 318, 416, 700, 917, 918, 1177, 1388
BstSFI	CTRYAG	1 cut(s)	1227
BstSLI	GKGCMC	1 cut(s)	1168
BstV1I	GCAGC	4 cut(s)	952, 1213, 1216, 1228
BstV2I	GAAGAC	1 cut(s)	1001
BstX2I	RGATCY	1 cut(s)	951
BstYI	RGATCY	1 cut(s)	951
BstZ17I	GTATAC	1 cut(s)	1429
BsuRI	GGCC	4 cut(s)	99, 318, 912, 1217
BtgI	CCRYGG	1 cut(s)	682
BtsCI	GGATG	7 cut(s)	150, 223, 438, 502, 724, 1081, 1374
BtsI	GCAGTG	2 cut(s)	871, 1505
BtsIMutI	CAGTG	6 cut(s)	63, 312, 781, 871, 1027, 1505
Cac8I	GCNNGC	3 cut(s)	195, 654, 1360
CfoI	GCGC	1 cut(s)	664
Cfr10I	RCCGGY	1 cut(s)	1358
Cfr13I	GGNCC	1 cut(s)	910
Cfr9I	CCCGGG	1 cut(s)	918
CseI	GACGC	2 cut(s)	1223, 1301
Csp6I	GTAC	3 cut(s)	232, 600, 884
CviAII	CATG	7 cut(s)	424, 428, 545, 584, 665, 683, 890
CviQI	GTAC	3 cut(s)	232, 600, 884
DdeI	CTNAG	5 cut(s)	198, 603, 871, 996, 1171
DpnI	GATC	4 cut(s)	95, 311, 953, 1005
DpnII	GATC	4 cut(s)	93, 309, 951, 1003
DraI	TTTAAA	1 cut(s)	846
DriI	GACNNNNNGTC	1 cut(s)	1005
EaeI	YGGCCR	2 cut(s)	97, 316
Eam1104I	CTCTTC	5 cut(s)	81, 585, 726, 900, 1256
Eam1105I	GACNNNNNGTC	1 cut(s)	1005
EarI	CTCTTC	5 cut(s)	81, 585, 726, 900, 1256
Eco130I	CCWWGG	2 cut(s)	682, 830
Eco24I	GRGCYC	1 cut(s)	183
Eco57I	CTGAAG	1 cut(s)	1079
Eco88I	CYCGRG	2 cut(s)	339, 918
EcoRII	CCWGG	5 cut(s)	182, 416, 700, 1177, 1388
EcoT14I	CCWWGG	2 cut(s)	682, 830
EcoT22I	ATGCAT	2 cut(s)	429, 585
EcoT38I	GRGCYC	1 cut(s)	183
ErhI	CCWWGG	2 cut(s)	682, 830
FaeI	CATG	7 cut(s)	427, 431, 548, 587, 668, 686, 893
FalI	AAGNNNNNCTT	2 cut(s)	1253, 1285
FaqI	GGGAC	3 cut(s)	200, 901, 1401
FatI	CATG	7 cut(s)	423, 427, 544, 583, 664, 682, 889
FauI	CCCGC	1 cut(s)	917
FauNDI	CATATG	1 cut(s)	639
FblI	GTMKAC	1 cut(s)	1428
Fnu4HI	GCNGC	4 cut(s)	966, 1205, 1227, 1242
FokI	GGATG	7 cut(s)	137, 230, 425, 509, 731, 1088, 1381
FriOI	GRGCYC	1 cut(s)	183
Fsp4HI	GCNGC	4 cut(s)	966, 1205, 1227, 1242
FspAI	RTGCGCAY	1 cut(s)	663
FspBI	CTAG	4 cut(s)	525, 831, 1448, 1507
FspI	TGCGCA	1 cut(s)	663
GlaI	GCGC	1 cut(s)	663
GluI	GCNGC	4 cut(s)	966, 1205, 1227, 1242
GsuI	CTGGAG	1 cut(s)	723
HaeIII	GGCC	4 cut(s)	99, 318, 912, 1217
HapII	CCGG	6 cut(s)	121, 319, 620, 919, 949, 1359
HgaI	GACGC	2 cut(s)	1223, 1301
HhaI	GCGC	1 cut(s)	664
Hin1I	GRCGYC	1 cut(s)	147
Hin1II	CATG	7 cut(s)	427, 431, 548, 587, 668, 686, 893
Hin6I	GCGC	1 cut(s)	662
HinP1I	GCGC	1 cut(s)	662
HincII	GTYRAC	1 cut(s)	757
HindII	GTYRAC	1 cut(s)	757
HpaII	CCGG	6 cut(s)	121, 319, 620, 919, 949, 1359
HphI	GGTGA	3 cut(s)	16, 530, 819
Hpy166II	GTNNAC	3 cut(s)	757, 779, 1429
Hpy188I	TCNGA	9 cut(s)	68, 217, 375, 633, 718, 730, 999, 1098, 1123
Hpy188III	TCNNGA	4 cut(s)	304, 341, 620, 1044
Hpy8I	GTNNAC	3 cut(s)	757, 779, 1429
Hpy99I	CGWCG	3 cut(s)	149, 1127, 1239
HpyAV	CCTTC	4 cut(s)	31, 509, 829, 1103
HpyCH4III	ACNGT	3 cut(s)	748, 825, 1444
HpyCH4IV	ACGT	4 cut(s)	147, 468, 598, 798
HpyF10VI	GCNNNNNNNGC	5 cut(s)	115, 704, 1172, 1223, 1355
HpyF3I	CTNAG	5 cut(s)	198, 603, 871, 996, 1171
HpySE526I	ACGT	4 cut(s)	147, 468, 598, 798
Hsp92I	GRCGYC	1 cut(s)	147
Hsp92II	CATG	7 cut(s)	427, 431, 548, 587, 668, 686, 893
HspAI	GCGC	1 cut(s)	662
Kpn2I	TCCGGA	1 cut(s)	619
KroI	GCCGGC	1 cut(s)	1358
KroNI	GCCGGC	1 cut(s)	1360
Kzo9I	GATC	4 cut(s)	93, 309, 951, 1003
LguI	GCTCTTC	1 cut(s)	81
LmnI	GCTCC	2 cut(s)	123, 704
Lsp1109I	GCAGC	4 cut(s)	952, 1213, 1216, 1228
LweI	GCATC	2 cut(s)	1049, 1072
MaeI	CTAG	4 cut(s)	525, 831, 1448, 1507
MaeII	ACGT	4 cut(s)	147, 468, 598, 798
MaeIII	GTNAC	5 cut(s)	331, 464, 825, 934, 944
MalI	GATC	4 cut(s)	95, 311, 953, 1005
MboI	GATC	4 cut(s)	93, 309, 951, 1003
MfeI	CAATTG	1 cut(s)	1363
MflI	RGATCY	1 cut(s)	951
MhlI	GDGCHC	2 cut(s)	183, 1168
MluCI	AATT	5 cut(s)	249, 408, 529, 1193, 1363
MmeI	TCCRAC	2 cut(s)	195, 1146
Mph1103I	ATGCAT	2 cut(s)	429, 585
MroI	TCCGGA	1 cut(s)	619
MroNI	GCCGGC	1 cut(s)	1358
MroXI	GAANNNNTTC	1 cut(s)	1153
MseI	TTAA	6 cut(s)	803, 845, 956, 1053, 1101, 1409
MspI	CCGG	6 cut(s)	121, 319, 620, 919, 949, 1359
MspR9I	CCNGG	9 cut(s)	122, 184, 320, 418, 702, 919, 920, 1179, 1390
MunI	CAATTG	1 cut(s)	1363
MvaI	CCWGG	5 cut(s)	184, 418, 702, 1179, 1390
MwoI	GCNNNNNNNGC	5 cut(s)	115, 704, 1172, 1223, 1355
NaeI	GCCGGC	1 cut(s)	1360
NciI	CCSGG	4 cut(s)	122, 320, 919, 920
NcoI	CCATGG	1 cut(s)	682
NdeI	CATATG	1 cut(s)	639
NdeII	GATC	4 cut(s)	93, 309, 951, 1003
NgoMIV	GCCGGC	1 cut(s)	1358
NlaIII	CATG	7 cut(s)	427, 431, 548, 587, 668, 686, 893
NmuCI	GTSAC	3 cut(s)	331, 464, 825
NsbI	TGCGCA	1 cut(s)	663
NsiI	ATGCAT	2 cut(s)	429, 585
NspI	RCATGY	2 cut(s)	587, 893
PaeR7I	CTCGAG	1 cut(s)	339
PasI	CCCWGGG	2 cut(s)	183, 417
PciSI	GCTCTTC	1 cut(s)	81
PcsI	WCGNNNNNNNCGW	1 cut(s)	144
PdiI	GCCGGC	1 cut(s)	1360
PdmI	GAANNNNTTC	1 cut(s)	1153
PkrI	GCNGC	4 cut(s)	967, 1206, 1228, 1243
Ppu21I	YACGTR	1 cut(s)	469
PsiI	TTATAA	1 cut(s)	1274
Psp6I	CCWGG	5 cut(s)	182, 416, 700, 1177, 1388
PspGI	CCWGG	5 cut(s)	182, 416, 700, 1177, 1388
PspPI	GGNCC	1 cut(s)	910
PstI	CTGCAG	1 cut(s)	1231
PsuI	RGATCY	1 cut(s)	951
RsaI	GTAC	3 cut(s)	233, 601, 885
RsaNI	GTAC	3 cut(s)	232, 600, 884
SapI	GCTCTTC	1 cut(s)	81
SaqAI	TTAA	6 cut(s)	803, 845, 956, 1053, 1101, 1409
SatI	GCNGC	4 cut(s)	966, 1205, 1227, 1242
Sau3AI	GATC	4 cut(s)	93, 309, 951, 1003
Sau96I	GGNCC	1 cut(s)	910
ScrFI	CCNGG	9 cut(s)	122, 184, 320, 418, 702, 919, 920, 1179, 1390
SduI	GDGCHC	2 cut(s)	183, 1168
SfaNI	GCATC	2 cut(s)	1049, 1072
SfcI	CTRYAG	1 cut(s)	1227
Sfr274I	CTCGAG	1 cut(s)	339
SlaI	CTCGAG	1 cut(s)	339
SmaI	CCCGGG	1 cut(s)	920
SmlI	CTYRAG	1 cut(s)	339
SmoI	CTYRAG	1 cut(s)	339
Sse9I	AATT	5 cut(s)	249, 408, 529, 1193, 1363
SsiI	CCGC	4 cut(s)	36, 924, 1301, 1356
SspMI	CTAG	4 cut(s)	525, 831, 1448, 1507
StyD4I	CCNGG	9 cut(s)	120, 182, 318, 416, 700, 917, 918, 1177, 1388
StyI	CCWWGG	2 cut(s)	682, 830
TaaI	ACNGT	3 cut(s)	748, 825, 1444
TaiI	ACGT	4 cut(s)	150, 471, 601, 801
TaqI	TCGA	3 cut(s)	279, 340, 1237
TasI	AATT	5 cut(s)	249, 408, 529, 1193, 1363
TatI	WGTACW	1 cut(s)	883
Tru1I	TTAA	6 cut(s)	803, 845, 956, 1053, 1101, 1409
Tru9I	TTAA	6 cut(s)	803, 845, 956, 1053, 1101, 1409
TscAI	CASTG	6 cut(s)	63, 319, 781, 871, 1027, 1505
TseFI	GTSAC	3 cut(s)	331, 464, 825
TseI	GCWGC	4 cut(s)	965, 1204, 1226, 1241
Tsp45I	GTSAC	3 cut(s)	331, 464, 825
TspDTI	ATGAA	5 cut(s)	528, 726, 1041, 1206, 1372
TspGWI	ACGGA	2 cut(s)	143, 509
TspMI	CCCGGG	1 cut(s)	918
TspRI	CASTG	6 cut(s)	63, 319, 781, 871, 1027, 1505
XceI	RCATGY	2 cut(s)	587, 893
XhoI	CTCGAG	1 cut(s)	339
XmaI	CCCGGG	1 cut(s)	918
XmaJI	CCTAGG	1 cut(s)	830
XmiI	GTMKAC	1 cut(s)	1428
XmnI	GAANNNNTTC	1 cut(s)	1153
XspI	CTAG	4 cut(s)	525, 831, 1448, 1507
ZraI	GACGTC	1 cut(s)	148
Zsp2I	ATGCAT	2 cut(s)	429, 585

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.