RchiOBHm_Chr1g0333731
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000197
Physical Location & Seq
Reverse (-)
25910844 .. 25913962
3119 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56253

Sequence Viewer

Length: 1500 bp
ATGAGCAGCGAGAGAACGACGCCGCTTTCAGTGCCGGTAGGCTACAGGTTCCATCCCACCGAAGAGGAGCTGGTGAACCATTATTTGAAGAAGAAGGTTCATGGCGGAAATGATTCCGAAATCAACCAGGTCATCCCTGAAATCGACCTCTGCAAATACGAGCCGGCTGAGCTTCCTGCATTGTTGGGGACTGAGACAGAGGCTCATGACATGGAGTGGTTCTTCTTCACCAGAAGGGCTTATAAGTACAACAAAAGCTCTCGCTCGAATCGGAGCACCAAGAAGGGATACTGGAAGATCACAGGGAAGGAGCGTGGAATTAAAGCTCGACGATCCAAAGCTGTGATTGGGATGAAGAAGACATTGACTTTTTACCAGGGTCGTGTGCCGAAATCGAAGAAGACCAGCTGGGTCATTCATGAGTGCTATCTTCCTGGAAATGGAGTTATTAAGCAGACCCAGGGCGACTTTGTTATCTGTCGCTTGAAGATTAGATCAGATAAGAAGGATTCTTCAGTCAGTAATGAAGGAGAACCTGGAAGCGCGAGTGTGTCTGAAATGAATCAAGAGGGAAATGAGGAGTTGCTATTCCATCAACCTCAGCCTCTGGATGACTGCTGCTCCTCAGCACTGCAGTCACCGGTGTCCCAAAAGCTGGAAGCTGTTCTGCAAACCAACGTCACTAATGATGATTGTAATGAGTTACAATCACCATTTGGAGATAGTGATTCTTGTCTATTAGACGGGAATGAAGTTTCAACCTGTGATGAAAATGAGGCTGTGTATGATGTGTTTCCACAGCTACGTGATCTGCCAGATCAAAATCTGGATTCACTCTTTGGTCCACTTCAGCCACAAGAGTGCTGCCACACCGTACTGCAGTCACCAATATACACAAAGCTGAGAGATGTTCCACATCCACTTCAGCCACAAGAGTACTGCCCCTCCATACTGCAGTCACCAATATACACAAAGCTGCAAGATGTTCTACATCCACCTCAGCCACAAGATTACGAGCCCTCAAAGTTTCAATCACCAATATACACAAAGCTGGGAAGTGTTCCACATCCACTTCAGCCACAAGATTACCAGCCCTCAAAGTTGCAGTTACCAATATACACAAAGCTGGGAACTGTTCCAGATGCCAATCTCTATTGTGGTGAATGCAATAATTGGCAATTTGCAGTTAAAAAAAATGTTTCAACCGATGAAGTTGGCATATTAGTTAGACAAATCATGTCTAATTTTGAAAATCAAGCTACAGATTTTAAGATTCCAGAGGTGCATCATCCTCAAACCAAAGGAAATTTGGAATCAGTGGTTTATCCATTCCAGCCACAAAATTTCACGTCGCAGCCACTGATGTACACAGAATTTGGAGATGCTCTACATAATACTGAAAGCAATGAGTTGCAATCTTCATTTGGGGATAATGACTCTTCTCTCACAAAGTTCTTGAATACAAATTTTGCTTACCAGGATTGTTACTCGGTTGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

499

Amino Acids

56.52

Weight (kDa)

5.29

Isoelectric Point (pI)

63.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 12 - 141 9.3e-40 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000197)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18010 FvH4_7g18010 FvH4_7g18021 FvH4_7g18070 FvH4_7g18070 FvH4_7g18200 FvH4_7g18250
malus_domestica MD01G1092200.v1.1 MD01G1092500.v1.1 MD01G1092600.v1.1 MD01G1092900.v1.1 MD01G1093000.v1.1 MD01G1093200.v1.1 MD01G1093500.v1.1 MD01G1093700.v1.1 MD01G1093800.v1.1 MD01G1093900.v1.1 MD01G1094000.v1.1 MD01G1094200.v1.1 MD01G1094400.v1.1 MD01G1094500.v1.1 MD01G1094700.v1.1 MD01G1094800.v1.1 MD01G1095100.v1.1 MD07G1162700.v1.1 MD07G1163200.v1.1 MD07G1163400.v1.1 MD07G1163700.v1.1 MD07G1164000.v1.1 MD10G1186100.v1.1
prunus_persica Prupe.2G201200_v2.0.a1 Prupe.2G201200_v2.0.a1 Prupe.2G201300_v2.0.a1 Prupe.2G201800_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202800_v2.0.a1 Prupe.2G202900_v2.0.a1 Prupe.2G203000_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204900_v2.0.a1
pyrus_communis pycom01g11610 pycom01g11650 pycom01g11670 pycom01g11680 pycom01g11700 pycom01g11710 pycom01g11720 pycom01g11730 pycom07g15770 pycom07g15860 pycom07g15870 pycom07g15890 pycom07g15900 pycom07g15920
rosa_chinensis RchiOBHm_Chr1g0333731 RchiOBHm_Chr1g0361411 RchiOBHm_Chr1g0361501 RchiOBHm_Chr1g0361551 RchiOBHm_Chr1g0361631 RchiOBHm_Chr1g0361691 RchiOBHm_Chr1g0361701
rosa_laevigata RLG00000011640 RLG00000014882 RLG00000027709 RLG00000027713 RLG00000027717 RLG00000027719 RLG00000029532 RLG00000030171 RLG00000030174 RLG00000030177 RLG00000030181 RLG00000030186
rosa_multiflora Rmu_co8135790.1_g000001 Rmu_co8371689.1_g000001 Rmu_co8391943.1_g000001 Rmu_co8469521.1_g000001 Rmu_co8502503.1_g000002 Rmu_sc0001034.1_g000001 Rmu_sc0002119.1_g000002 Rmu_sc0002119.1_g000009 Rmu_sc0002119.1_g000019 Rmu_sc0003426.1_g000005 Rmu_sc0003693.1_g000010 Rmu_sc0003704.1_g000007 Rmu_sc0006101.1_g000005 Rmu_sc0006417.1_g000006 Rmu_sc0007217.1_g000012 Rmu_sc0010384.1_g000001 Rmu_sc0011258.1_g000003 Rmu_sc0017253.1_g000002 Rmu_ssc0000062.1_g000022
rosa_roxburghii Rroxscaffold_159G00432930 Rroxscaffold_159G00433040 Rroxscaffold_159G00433060 Rroxscaffold_4G00294780 Rroxscaffold_4G00294810 Rroxscaffold_4G00294870 Rroxscaffold_4G00294930 Rroxscaffold_4G00294950 Rroxscaffold_4G00317240 Rroxscaffold_4G00325190 Rroxscaffold_4G00325210
rosa_rugosa Rorug01G0047400 Rorug01G0047800 Rorug01G0048100 Rorug01G0048100 Rorug01G0111500 Rorug01G0111500 Rorug01G0289800 Rorug01G0290300 Rorug01G0290700 Rorug01G0290900
rosa_samantha Rh1AG063000 Rh1AG064000 Rh1AG064400 Rh1AG133700 Rh1AG300300 Rh1AG300900 Rh1AG301000 Rh1AG301100 Rh1BG263800 Rh1BG264000 Rh1BG264100 Rh1CG281800 Rh1CG282100 Rh1CG282200 Rh1DG294000 Rh1DG294100 Rh5BG200600
rosa_wichuraiana Rw1G005400 Rw1G011170 Rw1G026570 Rw1G026580 Rw1G026610 Rw1G026640 Rw1G026670 Rw1G026700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 243
AccB7I CCANNNNNTGG 1 cut(s) 655
AccII CGCG 1 cut(s) 545
AciI CCGC 2 cut(s) 23, 105
AclWI GGATC 1 cut(s) 327
AcsI RAATTY 4 cut(s) 1306, 1342, 1373, 1465
AcuI CTGAAG 4 cut(s) 498, 833, 908, 1058
AcyI GRCGYC 1 cut(s) 20
AfaI GTAC 4 cut(s) 248, 876, 938, 1367
AfiI CCNNNNNNNGG 2 cut(s) 440, 655
AgeI ACCGGT 1 cut(s) 640
AgsI TTSAA 7 cut(s) 88, 487, 759, 1031, 1203, 1250, 1459
AjiI CACGTC 1 cut(s) 1350
AjnI CCWGG 6 cut(s) 126, 375, 433, 459, 535, 1476
AleI CACNNNNGTG 1 cut(s) 859
Alw21I GWGCWC 1 cut(s) 278
Alw26I GTCTC 1 cut(s) 188
AlwI GGATC 1 cut(s) 327
AlwNI CAGNNNCTG 2 cut(s) 607, 1360
ApeKI GCWGC 5 cut(s) 6, 618, 864, 976, 1354
ApoI RAATTY 4 cut(s) 1306, 1342, 1373, 1465
AsiGI ACCGGT 1 cut(s) 640
Asp700I GAANNNNTTC 2 cut(s) 112, 663
AspLEI GCGC 1 cut(s) 545
AspS9I GGNCC 1 cut(s) 842
AsuHPI GGTGA 8 cut(s) 85, 220, 630, 702, 876, 951, 1026, 1172
AvaII GGWCC 1 cut(s) 842
BanII GRGCYC 1 cut(s) 1020
BbsI GAAGAC 2 cut(s) 365, 407
Bbv12I GWGCWC 1 cut(s) 278
BbvCI CCTCAGC 3 cut(s) 600, 625, 999
BbvI GCAGC 5 cut(s) 18, 605, 851, 963, 1366
BccI CCATC 2 cut(s) 60, 600
BciT130I CCWGG 6 cut(s) 128, 377, 435, 461, 537, 1478
BciVI GTATCC 1 cut(s) 281
BcoDI GTCTC 1 cut(s) 188
BfmI CTRYAG 5 cut(s) 43, 632, 878, 953, 1260
BfuI GTATCC 1 cut(s) 281
BisI GCNGC 6 cut(s) 7, 23, 619, 865, 977, 1355
BlpI GCTNAGC 1 cut(s) 168
BlsI GCNGC 6 cut(s) 8, 24, 620, 866, 978, 1356
BmcAI AGTACT 1 cut(s) 938
Bme1390I CCNGG 6 cut(s) 128, 377, 435, 461, 537, 1478
Bme18I GGWCC 1 cut(s) 842
BmgBI CACGTC 1 cut(s) 1350
BmgT120I GGNCC 1 cut(s) 842
BmiI GGNNCC 1 cut(s) 50
BmrFI CCNGG 6 cut(s) 128, 377, 435, 461, 537, 1478
BmsI GCATC 3 cut(s) 1132, 1294, 1372
BpiI GAAGAC 2 cut(s) 365, 407
Bpu10I CCTNAGC 3 cut(s) 600, 625, 999
Bpu1102I GCTNAGC 1 cut(s) 168
BsaAI YACGTR 1 cut(s) 806
BsaBI GATNNNNATC 2 cut(s) 822, 1146
BsaHI GRCGYC 1 cut(s) 20
BsaJI CCNNGG 3 cut(s) 376, 459, 460
BsaWI WCCGGW 1 cut(s) 640
BsaXI ACNNNNNCTCC 4 cut(s) 605, 635, 929, 959
Bsc4I CCNNNNNNNGG 2 cut(s) 440, 655
Bse118I RCCGGY 3 cut(s) 34, 163, 640
Bse1I ACTGG 1 cut(s) 296
Bse3DI GCAATG 1 cut(s) 1411
Bse8I GATNNNNATC 2 cut(s) 822, 1146
BseBI CCWGG 6 cut(s) 128, 377, 435, 461, 537, 1478
BseDI CCNNGG 3 cut(s) 376, 459, 460
BseGI GGATG 8 cut(s) 52, 132, 357, 616, 916, 991, 1066, 1288
BseJI GATNNNNATC 2 cut(s) 822, 1146
BseLI CCNNNNNNNGG 2 cut(s) 440, 655
BseMI GCAATG 1 cut(s) 1411
BseMII CTCAG 6 cut(s) 159, 183, 614, 639, 893, 1013
BseNI ACTGG 1 cut(s) 296
BseRI GAGGAG 3 cut(s) 80, 593, 613
BseXI GCAGC 5 cut(s) 18, 605, 851, 963, 1366
BseYI CCCAGC 3 cut(s) 408, 1051, 1126
Bsh1236I CGCG 1 cut(s) 545
BshTI ACCGGT 1 cut(s) 640
BsiHKAI GWGCWC 1 cut(s) 278
BsiSI CCGG 3 cut(s) 35, 164, 641
BslFI GGGAC 2 cut(s) 202, 631
BslI CCNNNNNNNGG 2 cut(s) 440, 655
BsmAI GTCTC 1 cut(s) 188
BsmFI GGGAC 2 cut(s) 202, 631
BsmI GAATGC 1 cut(s) 1169
Bsp1286I GDGCHC 2 cut(s) 278, 1020
Bsp1407I TGTACA 1 cut(s) 1365
Bsp143I GATC 5 cut(s) 297, 332, 494, 808, 817
Bsp1720I GCTNAGC 1 cut(s) 168
BspACI CCGC 2 cut(s) 23, 105
BspCNI CTCAG 6 cut(s) 160, 184, 613, 638, 894, 1012
BspFNI CGCG 1 cut(s) 545
BspHI TCATGA 2 cut(s) 205, 418
BspLI GGNNCC 1 cut(s) 50
BspMAI CTGCAG 3 cut(s) 636, 882, 957
BspPI GGATC 1 cut(s) 327
BsrDI GCAATG 1 cut(s) 1411
BsrFI RCCGGY 3 cut(s) 34, 163, 640
BsrGI TGTACA 1 cut(s) 1365
BsrI ACTGG 1 cut(s) 296
BssAI RCCGGY 3 cut(s) 34, 163, 640
BssECI CCNNGG 3 cut(s) 376, 459, 460
BssMI GATC 5 cut(s) 297, 332, 494, 808, 817
BssNI GRCGYC 1 cut(s) 20
Bst2UI CCWGG 6 cut(s) 128, 377, 435, 461, 537, 1478
Bst4CI ACNGT 2 cut(s) 874, 1135
Bst6I CTCTTC 2 cut(s) 57, 1444
BstACI GRCGYC 1 cut(s) 20
BstAUI TGTACA 1 cut(s) 1365
BstBAI YACGTR 1 cut(s) 806
BstC8I GCNNGC 1 cut(s) 165
BstDEI CTNAG 6 cut(s) 168, 192, 600, 625, 902, 999
BstF5I GGATG 8 cut(s) 52, 132, 357, 616, 916, 991, 1066, 1288
BstFNI CGCG 1 cut(s) 545
BstHHI GCGC 1 cut(s) 545
BstKTI GATC 5 cut(s) 300, 335, 497, 811, 820
BstMAI GTCTC 1 cut(s) 188
BstMBI GATC 5 cut(s) 297, 332, 494, 808, 817
BstMWI GCNNNNNNNGC 2 cut(s) 31, 169
BstNI CCWGG 6 cut(s) 128, 377, 435, 461, 537, 1478
BstSCI CCNGG 6 cut(s) 126, 375, 433, 459, 535, 1476
BstSFI CTRYAG 5 cut(s) 43, 632, 878, 953, 1260
BstUI CGCG 1 cut(s) 545
BstV1I GCAGC 5 cut(s) 18, 605, 851, 963, 1366
BstV2I GAAGAC 2 cut(s) 365, 407
BsuI GTATCC 1 cut(s) 281
BtrI CACGTC 1 cut(s) 1350
BtsCI GGATG 8 cut(s) 52, 132, 357, 616, 916, 991, 1066, 1288
BtsI GCAGTG 1 cut(s) 629
BtsIMutI CAGTG 4 cut(s) 36, 629, 1323, 1358
Cac8I GCNNGC 1 cut(s) 165
CaiI CAGNNNCTG 2 cut(s) 607, 1360
CciI TCATGA 2 cut(s) 205, 418
CfoI GCGC 1 cut(s) 545
Cfr10I RCCGGY 3 cut(s) 34, 163, 640
Cfr13I GGNCC 1 cut(s) 842
CseI GACGC 1 cut(s) 28
CsiI ACCWGGT 1 cut(s) 126
Csp6I GTAC 4 cut(s) 247, 875, 937, 1366
CspAI ACCGGT 1 cut(s) 640
CviAII CATG 5 cut(s) 101, 206, 211, 419, 1237
CviQI GTAC 4 cut(s) 247, 875, 937, 1366
DdeI CTNAG 6 cut(s) 168, 192, 600, 625, 902, 999
DpnI GATC 5 cut(s) 299, 334, 496, 810, 819
DpnII GATC 5 cut(s) 297, 332, 494, 808, 817
Eam1104I CTCTTC 2 cut(s) 57, 1444
EarI CTCTTC 2 cut(s) 57, 1444
EciI GGCGGA 1 cut(s) 120
Eco24I GRGCYC 1 cut(s) 1020
Eco47I GGWCC 1 cut(s) 842
Eco57I CTGAAG 4 cut(s) 498, 833, 908, 1058
EcoRII CCWGG 6 cut(s) 126, 375, 433, 459, 535, 1476
EcoT38I GRGCYC 1 cut(s) 1020
FaeI CATG 5 cut(s) 104, 209, 214, 422, 1240
FaqI GGGAC 2 cut(s) 202, 631
FatI CATG 5 cut(s) 100, 205, 210, 418, 1236
Fnu4HI GCNGC 6 cut(s) 7, 23, 619, 865, 977, 1355
FokI GGATG 8 cut(s) 39, 119, 364, 623, 903, 978, 1053, 1275
FriOI GRGCYC 1 cut(s) 1020
Fsp4HI GCNGC 6 cut(s) 7, 23, 619, 865, 977, 1355
GlaI GCGC 1 cut(s) 544
GluI GCNGC 6 cut(s) 7, 23, 619, 865, 977, 1355
GsaI CCCAGC 3 cut(s) 412, 1055, 1130
HapII CCGG 3 cut(s) 35, 164, 641
HgaI GACGC 1 cut(s) 28
HhaI GCGC 1 cut(s) 545
Hin1I GRCGYC 1 cut(s) 20
Hin1II CATG 5 cut(s) 104, 209, 214, 422, 1240
Hin6I GCGC 1 cut(s) 543
HinP1I GCGC 1 cut(s) 543
HinfI GANTC 9 cut(s) 113, 268, 509, 562, 728, 830, 1273, 1313, 1436
HpaII CCGG 3 cut(s) 35, 164, 641
HphI GGTGA 8 cut(s) 85, 220, 630, 702, 876, 951, 1026, 1172
Hpy166II GTNNAC 3 cut(s) 76, 845, 1368
Hpy188I TCNGA 4 cut(s) 118, 273, 499, 556
Hpy188III TCNNGA 8 cut(s) 206, 419, 566, 608, 827, 1139, 1277, 1456
Hpy8I GTNNAC 3 cut(s) 76, 845, 1368
Hpy99I CGWCG 3 cut(s) 22, 333, 1354
HpyAV CCTTC 6 cut(s) 88, 228, 277, 301, 499, 521
HpyCH4III ACNGT 2 cut(s) 874, 1135
HpyCH4IV ACGT 3 cut(s) 678, 805, 1349
HpyF10VI GCNNNNNNNGC 2 cut(s) 31, 169
HpyF3I CTNAG 6 cut(s) 168, 192, 600, 625, 902, 999
HpySE526I ACGT 3 cut(s) 678, 805, 1349
Hsp92I GRCGYC 1 cut(s) 20
Hsp92II CATG 5 cut(s) 104, 209, 214, 422, 1240
HspAI GCGC 1 cut(s) 543
KroI GCCGGC 1 cut(s) 163
KroNI GCCGGC 1 cut(s) 165
Kzo9I GATC 5 cut(s) 297, 332, 494, 808, 817
LmnI GCTCC 4 cut(s) 67, 273, 310, 626
Lsp1109I GCAGC 5 cut(s) 18, 605, 851, 963, 1366
LweI GCATC 3 cut(s) 1132, 1294, 1372
MabI ACCWGGT 1 cut(s) 126
MaeII ACGT 3 cut(s) 678, 805, 1349
MaeIII GTNAC 7 cut(s) 636, 679, 702, 882, 957, 1107, 1484
MalI GATC 5 cut(s) 299, 334, 496, 810, 819
MboI GATC 5 cut(s) 297, 332, 494, 808, 817
MhlI GDGCHC 2 cut(s) 278, 1020
MluCI AATT 8 cut(s) 318, 1171, 1178, 1243, 1306, 1342, 1373, 1465
MlyI GAGTC 1 cut(s) 1430
MroNI GCCGGC 1 cut(s) 163
MroXI GAANNNNTTC 2 cut(s) 112, 663
MseI TTAA 5 cut(s) 321, 450, 1188, 1269, 1498
MslI CAYNNNNRTG 1 cut(s) 859
MspA1I CMGCKG 1 cut(s) 408
MspI CCGG 3 cut(s) 35, 164, 641
MspR9I CCNGG 6 cut(s) 128, 377, 435, 461, 537, 1478
Mva1269I GAATGC 1 cut(s) 1169
MvaI CCWGG 6 cut(s) 128, 377, 435, 461, 537, 1478
MvnI CGCG 1 cut(s) 545
MwoI GCNNNNNNNGC 2 cut(s) 31, 169
NaeI GCCGGC 1 cut(s) 165
NdeII GATC 5 cut(s) 297, 332, 494, 808, 817
NgoMIV GCCGGC 1 cut(s) 163
NlaIII CATG 5 cut(s) 104, 209, 214, 422, 1240
NlaIV GGNNCC 1 cut(s) 50
NmuCI GTSAC 4 cut(s) 636, 679, 882, 957
OliI CACNNNNGTG 1 cut(s) 859
PagI TCATGA 2 cut(s) 205, 418
PasI CCCWGGG 1 cut(s) 460
PctI GAATGC 1 cut(s) 1169
PdiI GCCGGC 1 cut(s) 165
PdmI GAANNNNTTC 2 cut(s) 112, 663
PfeI GAWTC 8 cut(s) 113, 268, 509, 562, 728, 830, 1273, 1313
PflMI CCANNNNNTGG 1 cut(s) 655
PfoI TCCNGGA 1 cut(s) 433
PinAI ACCGGT 1 cut(s) 640
PkrI GCNGC 6 cut(s) 8, 24, 620, 866, 978, 1356
PleI GAGTC 1 cut(s) 1430
PpsI GAGTC 1 cut(s) 1430
Ppu21I YACGTR 1 cut(s) 806
PsiI TTATAA 1 cut(s) 243
Psp6I CCWGG 6 cut(s) 126, 375, 433, 459, 535, 1476
PspFI CCCAGC 3 cut(s) 408, 1051, 1126
PspGI CCWGG 6 cut(s) 126, 375, 433, 459, 535, 1476
PspN4I GGNNCC 1 cut(s) 50
PspPI GGNCC 1 cut(s) 842
PstI CTGCAG 3 cut(s) 636, 882, 957
PstNI CAGNNNCTG 2 cut(s) 607, 1360
PvuII CAGCTG 1 cut(s) 408
RsaI GTAC 4 cut(s) 248, 876, 938, 1367
RsaNI GTAC 4 cut(s) 247, 875, 937, 1366
RseI CAYNNNNRTG 1 cut(s) 859
SaqAI TTAA 5 cut(s) 321, 450, 1188, 1269, 1498
SatI GCNGC 6 cut(s) 7, 23, 619, 865, 977, 1355
Sau3AI GATC 5 cut(s) 297, 332, 494, 808, 817
Sau96I GGNCC 1 cut(s) 842
ScaI AGTACT 1 cut(s) 938
SchI GAGTC 1 cut(s) 1430
ScrFI CCNGG 6 cut(s) 128, 377, 435, 461, 537, 1478
SduI GDGCHC 2 cut(s) 278, 1020
SexAI ACCWGGT 1 cut(s) 126
SfaNI GCATC 3 cut(s) 1132, 1294, 1372
SfcI CTRYAG 5 cut(s) 43, 632, 878, 953, 1260
SgrAI CRCCGGYG 1 cut(s) 640
SinI GGWCC 1 cut(s) 842
SmiMI CAYNNNNRTG 1 cut(s) 859
Sse9I AATT 8 cut(s) 318, 1171, 1178, 1243, 1306, 1342, 1373, 1465
SsiI CCGC 2 cut(s) 23, 105
StyD4I CCNGG 6 cut(s) 126, 375, 433, 459, 535, 1476
TaaI ACNGT 2 cut(s) 874, 1135
TaiI ACGT 3 cut(s) 681, 808, 1352
TaqI TCGA 4 cut(s) 144, 266, 328, 395
TasI AATT 8 cut(s) 318, 1171, 1178, 1243, 1306, 1342, 1373, 1465
TatI WGTACW 3 cut(s) 246, 936, 1365
TauI GCSGC 1 cut(s) 25
TfiI GAWTC 8 cut(s) 113, 268, 509, 562, 728, 830, 1273, 1313
Tru1I TTAA 5 cut(s) 321, 450, 1188, 1269, 1498
Tru9I TTAA 5 cut(s) 321, 450, 1188, 1269, 1498
TscAI CASTG 4 cut(s) 36, 636, 1323, 1365
TseFI GTSAC 4 cut(s) 636, 679, 882, 957
TseI GCWGC 5 cut(s) 6, 618, 864, 976, 1354
Tsp45I GTSAC 4 cut(s) 636, 679, 882, 957
TspDTI ATGAA 9 cut(s) 89, 368, 407, 540, 575, 765, 783, 1224, 1410
TspRI CASTG 4 cut(s) 36, 636, 1323, 1365
Van91I CCANNNNNTGG 1 cut(s) 655
VpaK11BI GGWCC 1 cut(s) 842
XapI RAATTY 4 cut(s) 1306, 1342, 1373, 1465
XcmI CCANNNNNNNNNTGG 1 cut(s) 1306
XmnI GAANNNNTTC 2 cut(s) 112, 663
ZrmI AGTACT 1 cut(s) 938
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.