Rh1CG282100

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0000197
Physical Location & Seq
Reverse (-)
55392358 .. 55396692
4335 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG282100.1

Sequence Viewer

Length: 1701 bp
ATGCAGGAAAATACTCGACCTAAAGAAATTTTGGGTTCACTCTTTTCCTCACGGGCATCACCTGAGTTGCCTCAATCAGATGATTATTTCTCCTCCATGCTGAGAGGCAATTTTCAGCATGCAAATGCTGGTAGTACTATCCATATCGAGACGGAAGATGAAACAGAGTTCTTGAAGTCAATTTTCATTGATCAGGATGATTACTCCTTCGAAGAGGAAACACACACTACTCTCAACCATTCCAGTGTGGATAAAAGAATTCTAGAAACTGCACAGATATCAGTTCATCACAGAGTTCTCCCTCTAGTTTTCAAAAAATTGCTGCGAGGGAGTCCAAACCCAGACTGCAAATCTGACTTGTTGAAGGACATTACTTTACCTGTTGCTTCAAGCCTGTCCGAACGAGATAAAGATGTTCTGCTTCTTAACCAGATATTCGGGAAGGATGATGCCTCTGTTAATGTTGCAGTCAATAAACATCGGGATATTGACCGTGTTCAATCAGGGAAGACTGAAACTGCGCAATCATTTGATTATGGGGAAGTGCTACAAGCACATGAAAAACGTTATGTTGAGGATCAAGATATAGAAGGAGCTGGACAGGCCTTCAGTTTACCTGTTGCTTCAAGCCTATCCGAACGAGACAAAGATGTTGTGCTTCTTGACCGGTTATTCGGGAAGGATGATGCCTCTGTTAATGTTGCAGTCAATAAACCTTGGGATATTGACCGTGTTCAATCAGAGACTGACGAAATCGAGCATGAACCAAGTCCCATTTTGTTACAGGAGCCACAGGGTGATGGACCTAGGATTAATTGTATCACCTTAGTCACTGATGAAAGTTCTATAAACAAAGGCAGGCGCAGGCAGACATCTATAATCAGACAAACTGCACAATCATCCTTCTCATGGCACAAGGGGAAGACTGAAACTGGGAAATCATTTGGTTATAAGGAAGCGCTACAAGCACTTGTGACTGATGAAAAACATTATGTTGAGGGTCAAGATATGGAAGCAGCTGGACAGGCCTTCAGTTTACCTGTTGCTTCAAGCCTATCTGGGAAGAGTGCCTTCTTGGTAAACACAGCAGCAAGTAGACCCCGATCAATGGGATCAAGGATACTTCCAACAAGTTTTCAATCAGTCTCTGAGGAAACCAAGTATCAACCATGTCCTAGTTTCCCAGTGGAGCCACAGGGTTCTAATATGCCCTCGAGGACCTTAGCAACTGACGAAAGTTCTCTATATGAAAGCAGTCACTTTGGTTTCATTCCAGAGTCCACAACTCTTCATGCCACTGGTTCTATGTTCGGGACTCATATGACGTTGCAATGCAGTTATGAAGAAACACATAGTGGATCAAAGAGTTCGTTCATTGTGTGGAAGACATCCCCAATAATCCATAGATCATTTCCCCCAATAGTGTACTTTTTTAACCTGATCAGCGGCGCATATTGGCTCCATATTGGCTGGGGAATTTGTTTCAAATGGGAGGAAAAGTATGAGTCTCAAACCTTTACTTATCTTTCTCAAAGAGGTCGTAATCCCAGTCTCAGTGGGAATTTCTTGTCGCGAAAGGAAGCATGGGTTTCTTTTTTCTCTTTTCTTTTGTTTCTGTTCTTATTTTCTGGCCCAGCAAATATGTTTTTAAGTTGGCTAGTCCTTGCGGAAGCAGAACAATGTTTAGAGTTGGTGTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

566

Amino Acids

63.54

Weight (kDa)

5.26

Isoelectric Point (pI)

53.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000197)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18010 FvH4_7g18010 FvH4_7g18021 FvH4_7g18070 FvH4_7g18070 FvH4_7g18200 FvH4_7g18250
malus_domestica MD01G1092200.v1.1 MD01G1092500.v1.1 MD01G1092600.v1.1 MD01G1092900.v1.1 MD01G1093000.v1.1 MD01G1093200.v1.1 MD01G1093500.v1.1 MD01G1093700.v1.1 MD01G1093800.v1.1 MD01G1093900.v1.1 MD01G1094000.v1.1 MD01G1094200.v1.1 MD01G1094400.v1.1 MD01G1094500.v1.1 MD01G1094700.v1.1 MD01G1094800.v1.1 MD01G1095100.v1.1 MD07G1162700.v1.1 MD07G1163200.v1.1 MD07G1163400.v1.1 MD07G1163700.v1.1 MD07G1164000.v1.1 MD10G1186100.v1.1
prunus_persica Prupe.2G201200_v2.0.a1 Prupe.2G201200_v2.0.a1 Prupe.2G201300_v2.0.a1 Prupe.2G201800_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202800_v2.0.a1 Prupe.2G202900_v2.0.a1 Prupe.2G203000_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204900_v2.0.a1
pyrus_communis pycom01g11610 pycom01g11650 pycom01g11670 pycom01g11680 pycom01g11700 pycom01g11710 pycom01g11720 pycom01g11730 pycom07g15770 pycom07g15860 pycom07g15870 pycom07g15890 pycom07g15900 pycom07g15920
rosa_chinensis RchiOBHm_Chr1g0333731 RchiOBHm_Chr1g0361411 RchiOBHm_Chr1g0361501 RchiOBHm_Chr1g0361551 RchiOBHm_Chr1g0361631 RchiOBHm_Chr1g0361691 RchiOBHm_Chr1g0361701
rosa_laevigata RLG00000011640 RLG00000014882 RLG00000027709 RLG00000027713 RLG00000027717 RLG00000027719 RLG00000029532 RLG00000030171 RLG00000030174 RLG00000030177 RLG00000030181 RLG00000030186
rosa_multiflora Rmu_co8135790.1_g000001 Rmu_co8371689.1_g000001 Rmu_co8391943.1_g000001 Rmu_co8469521.1_g000001 Rmu_co8502503.1_g000002 Rmu_sc0001034.1_g000001 Rmu_sc0002119.1_g000002 Rmu_sc0002119.1_g000009 Rmu_sc0002119.1_g000019 Rmu_sc0003426.1_g000005 Rmu_sc0003693.1_g000010 Rmu_sc0003704.1_g000007 Rmu_sc0006101.1_g000005 Rmu_sc0006417.1_g000006 Rmu_sc0007217.1_g000012 Rmu_sc0010384.1_g000001 Rmu_sc0011258.1_g000003 Rmu_sc0017253.1_g000002 Rmu_ssc0000062.1_g000022
rosa_roxburghii Rroxscaffold_159G00432930 Rroxscaffold_159G00433040 Rroxscaffold_159G00433060 Rroxscaffold_4G00294780 Rroxscaffold_4G00294810 Rroxscaffold_4G00294870 Rroxscaffold_4G00294930 Rroxscaffold_4G00294950 Rroxscaffold_4G00317240 Rroxscaffold_4G00325190 Rroxscaffold_4G00325210
rosa_rugosa Rorug01G0047400 Rorug01G0047800 Rorug01G0048100 Rorug01G0048100 Rorug01G0111500 Rorug01G0111500 Rorug01G0289800 Rorug01G0290300 Rorug01G0290700 Rorug01G0290900
rosa_samantha Rh1AG063000 Rh1AG064000 Rh1AG064400 Rh1AG133700 Rh1AG300300 Rh1AG300900 Rh1AG301000 Rh1AG301100 Rh1BG263800 Rh1BG264000 Rh1BG264100 Rh1CG281800 Rh1CG282100 Rh1CG282200 Rh1DG294000 Rh1DG294100 Rh5BG200600
rosa_wichuraiana Rw1G005400 Rw1G011170 Rw1G026570 Rw1G026580 Rw1G026610 Rw1G026640 Rw1G026670 Rw1G026700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 951
AbsI CCTCGAGG 1 cut(s) 1213
Acc16I TGCGCA 1 cut(s) 522
AccI GTMKAC 1 cut(s) 1096
AccII CGCG 1 cut(s) 1573
AciI CCGC 2 cut(s) 1446, 1667
AclI AACGTT 1 cut(s) 565
AclWI GGATC 3 cut(s) 585, 1120, 1366
AcsI RAATTY 4 cut(s) 27, 258, 1476, 1561
AcuI CTGAAG 2 cut(s) 592, 1015
AdeI CACNNNGTG 2 cut(s) 797, 1355
AfaI GTAC 3 cut(s) 136, 1427, 1697
AfeI AGCGCT 1 cut(s) 960
AfiI CCNNNNNNNGG 2 cut(s) 909, 1108
AgeI ACCGGT 1 cut(s) 666
AluBI AGCT 2 cut(s) 596, 1019
AluI AGCT 2 cut(s) 596, 1019
Alw26I GTCTC 6 cut(s) 143, 636, 737, 1150, 1512, 1556
AlwI GGATC 3 cut(s) 585, 1120, 1366
AlwNI CAGNNNCTG 2 cut(s) 746, 1148
Ama87I CYCGRG 1 cut(s) 1213
Aor51HI AGCGCT 1 cut(s) 960
AoxI GGCC 3 cut(s) 603, 1026, 1630
ApeKI GCWGC 3 cut(s) 322, 1016, 1088
ApoI RAATTY 4 cut(s) 27, 258, 1476, 1561
ArsI GACNNNNNNTTYG 2 cut(s) 656, 688
AseI ATTAAT 1 cut(s) 813
AsiGI ACCGGT 1 cut(s) 666
AspA2I CCTAGG 1 cut(s) 806
AspLEI GCGC 4 cut(s) 523, 864, 961, 1451
AspS9I GGNCC 3 cut(s) 803, 1218, 1631
AsuHPI GGTGA 3 cut(s) 51, 809, 814
AsuII TTCGAA 1 cut(s) 210
AvaI CYCGRG 1 cut(s) 1213
AvaII GGWCC 2 cut(s) 803, 1218
AvrII CCTAGG 1 cut(s) 806
BbsI GAAGAC 3 cut(s) 515, 929, 1391
BbvI GCAGC 3 cut(s) 309, 1028, 1100
BccI CCATC 1 cut(s) 794
BciVI GTATCC 1 cut(s) 1113
BclI TGATCA 2 cut(s) 190, 1440
BcoDI GTCTC 6 cut(s) 143, 636, 737, 1150, 1512, 1556
BfaI CTAG 6 cut(s) 263, 305, 807, 1176, 1658, 1699
BfoI RGCGCY 1 cut(s) 962
BfuI GTATCC 1 cut(s) 1113
BisI GCNGC 4 cut(s) 323, 1017, 1089, 1447
BlnI CCTAGG 1 cut(s) 806
BlsI GCNGC 4 cut(s) 324, 1018, 1090, 1448
BmcAI AGTACT 1 cut(s) 136
Bme18I GGWCC 2 cut(s) 803, 1218
BmeT110I CYCGRG 1 cut(s) 1213
BmgT120I GGNCC 3 cut(s) 803, 1218, 1631
BmiI GGNNCC 3 cut(s) 789, 1191, 1460
BmrI ACTGGG 3 cut(s) 942, 1178, 1542
BmsI GCATC 3 cut(s) 65, 439, 676
BmuI ACTGGG 3 cut(s) 942, 1178, 1542
BpiI GAAGAC 3 cut(s) 515, 929, 1391
Bpu10I CCTNAGC 1 cut(s) 1222
Bpu14I TTCGAA 1 cut(s) 210
BsaJI CCNNGG 2 cut(s) 716, 806
BsaWI WCCGGW 1 cut(s) 666
BsaXI ACNNNNNCTCC 2 cut(s) 1484, 1514
Bsc4I CCNNNNNNNGG 2 cut(s) 909, 1108
Bse118I RCCGGY 1 cut(s) 666
Bse1I ACTGG 5 cut(s) 243, 937, 1184, 1303, 1548
Bse3DI GCAATG 1 cut(s) 1337
BseDI CCNNGG 2 cut(s) 716, 806
BseGI GGATG 5 cut(s) 202, 451, 688, 899, 1388
BseLI CCNNNNNNNGG 2 cut(s) 909, 1108
BseMI GCAATG 1 cut(s) 1337
BseMII CTCAG 4 cut(s) 54, 92, 1140, 1567
BseNI ACTGG 5 cut(s) 243, 937, 1184, 1303, 1548
BseRI GAGGAG 1 cut(s) 82
BseXI GCAGC 3 cut(s) 309, 1028, 1100
BseYI CCCAGC 2 cut(s) 1470, 1633
BsgI GTGCAG 2 cut(s) 255, 876
Bsh1236I CGCG 1 cut(s) 1573
BshFI GGCC 3 cut(s) 605, 1028, 1632
BshTI ACCGGT 1 cut(s) 666
BsiHKCI CYCGRG 1 cut(s) 1213
BsiSI CCGG 1 cut(s) 667
BslFI GGGAC 2 cut(s) 756, 1327
BslI CCNNNNNNNGG 2 cut(s) 909, 1108
BsmAI GTCTC 6 cut(s) 143, 636, 737, 1150, 1512, 1556
BsmBI CGTCTC 1 cut(s) 143
BsmFI GGGAC 2 cut(s) 756, 1327
BsnI GGCC 3 cut(s) 605, 1028, 1632
BsoBI CYCGRG 1 cut(s) 1213
Bsp119I TTCGAA 1 cut(s) 210
Bsp143I GATC 7 cut(s) 190, 577, 1103, 1112, 1358, 1406, 1440
Bsp68I TCGCGA 1 cut(s) 1573
BspACI CCGC 2 cut(s) 1446, 1667
BspANI GGCC 3 cut(s) 605, 1028, 1632
BspCNI CTCAG 4 cut(s) 55, 93, 1141, 1566
BspFNI CGCG 1 cut(s) 1573
BspLI GGNNCC 3 cut(s) 789, 1191, 1460
BspPI GGATC 3 cut(s) 585, 1120, 1366
BspT104I TTCGAA 1 cut(s) 210
BsrDI GCAATG 1 cut(s) 1337
BsrFI RCCGGY 1 cut(s) 666
BsrI ACTGG 5 cut(s) 243, 937, 1184, 1303, 1548
BssAI RCCGGY 1 cut(s) 666
BssECI CCNNGG 2 cut(s) 716, 806
BssMI GATC 7 cut(s) 190, 577, 1103, 1112, 1358, 1406, 1440
BssT1I CCWWGG 2 cut(s) 716, 806
Bst4CI ACNGT 2 cut(s) 494, 731
Bst6I CTCTTC 3 cut(s) 207, 1058, 1293
BstBI TTCGAA 1 cut(s) 210
BstC8I GCNNGC 3 cut(s) 120, 860, 866
BstDEI CTNAG 6 cut(s) 63, 101, 826, 1149, 1222, 1553
BstF5I GGATG 5 cut(s) 202, 451, 688, 899, 1388
BstFNI CGCG 1 cut(s) 1573
BstH2I RGCGCY 1 cut(s) 962
BstHHI GCGC 4 cut(s) 523, 864, 961, 1451
BstKTI GATC 7 cut(s) 193, 580, 1106, 1115, 1361, 1409, 1443
BstMAI GTCTC 6 cut(s) 143, 636, 737, 1150, 1512, 1556
BstMBI GATC 7 cut(s) 190, 577, 1103, 1112, 1358, 1406, 1440
BstMWI GCNNNNNNNGC 3 cut(s) 602, 965, 1025
BstNSI RCATGY 1 cut(s) 122
BstUI CGCG 1 cut(s) 1573
BstV1I GCAGC 3 cut(s) 309, 1028, 1100
BstV2I GAAGAC 3 cut(s) 515, 929, 1391
BsuI GTATCC 1 cut(s) 1113
BsuRI GGCC 3 cut(s) 605, 1028, 1632
BtsCI GGATG 5 cut(s) 202, 451, 688, 899, 1388
BtsIMutI CAGTG 5 cut(s) 250, 831, 1191, 1296, 1561
BtuMI TCGCGA 1 cut(s) 1573
Cac8I GCNNGC 3 cut(s) 120, 860, 866
CaiI CAGNNNCTG 2 cut(s) 746, 1148
CfoI GCGC 4 cut(s) 523, 864, 961, 1451
Cfr10I RCCGGY 1 cut(s) 666
Cfr13I GGNCC 3 cut(s) 803, 1218, 1631
Csp6I GTAC 3 cut(s) 135, 1426, 1696
CspAI ACCGGT 1 cut(s) 666
CviAII CATG 8 cut(s) 97, 119, 557, 761, 909, 1170, 1292, 1584
CviQI GTAC 3 cut(s) 135, 1426, 1696
DdeI CTNAG 6 cut(s) 63, 101, 826, 1149, 1222, 1553
DpnI GATC 7 cut(s) 192, 579, 1105, 1114, 1360, 1408, 1442
DpnII GATC 7 cut(s) 190, 577, 1103, 1112, 1358, 1406, 1440
DraIII CACNNNGTG 2 cut(s) 797, 1355
Eam1104I CTCTTC 3 cut(s) 207, 1058, 1293
EarI CTCTTC 3 cut(s) 207, 1058, 1293
Eco130I CCWWGG 2 cut(s) 716, 806
Eco147I AGGCCT 2 cut(s) 605, 1028
Eco32I GATATC 1 cut(s) 279
Eco47I GGWCC 2 cut(s) 803, 1218
Eco47III AGCGCT 1 cut(s) 960
Eco57I CTGAAG 2 cut(s) 592, 1015
Eco88I CYCGRG 1 cut(s) 1213
EcoO109I RGGNCCY 1 cut(s) 1218
EcoRI GAATTC 1 cut(s) 258
EcoRV GATATC 1 cut(s) 279
EcoT14I CCWWGG 2 cut(s) 716, 806
ErhI CCWWGG 2 cut(s) 716, 806
Esp3I CGTCTC 1 cut(s) 143
FaeI CATG 8 cut(s) 100, 122, 560, 764, 912, 1173, 1295, 1587
FalI AAGNNNNNCTT 2 cut(s) 1055, 1087
FaqI GGGAC 2 cut(s) 756, 1327
FatI CATG 8 cut(s) 96, 118, 556, 760, 908, 1169, 1291, 1583
FauNDI CATATG 1 cut(s) 1320
FbaI TGATCA 2 cut(s) 190, 1440
FblI GTMKAC 1 cut(s) 1096
Fnu4HI GCNGC 4 cut(s) 323, 1017, 1089, 1447
FokI GGATG 5 cut(s) 209, 458, 695, 886, 1375
Fsp4HI GCNGC 4 cut(s) 323, 1017, 1089, 1447
FspBI CTAG 6 cut(s) 263, 305, 807, 1176, 1658, 1699
FspI TGCGCA 1 cut(s) 522
GlaI GCGC 4 cut(s) 522, 863, 960, 1450
GluI GCNGC 4 cut(s) 323, 1017, 1089, 1447
GsaI CCCAGC 2 cut(s) 1474, 1637
HaeII RGCGCY 1 cut(s) 962
HaeIII GGCC 3 cut(s) 605, 1028, 1632
HapII CCGG 1 cut(s) 667
HhaI GCGC 4 cut(s) 523, 864, 961, 1451
Hin1II CATG 8 cut(s) 100, 122, 560, 764, 912, 1173, 1295, 1587
Hin6I GCGC 4 cut(s) 521, 862, 959, 1449
HinP1I GCGC 4 cut(s) 521, 862, 959, 1449
HinfI GANTC 4 cut(s) 331, 1277, 1315, 1505
HpaII CCGG 1 cut(s) 667
HphI GGTGA 3 cut(s) 51, 809, 814
Hpy166II GTNNAC 8 cut(s) 38, 614, 1037, 1081, 1097, 1281, 1426, 1696
Hpy188I TCNGA 7 cut(s) 79, 355, 400, 637, 742, 884, 1150
Hpy8I GTNNAC 8 cut(s) 38, 614, 1037, 1081, 1097, 1281, 1426, 1696
HpyAV CCTTC 9 cut(s) 217, 358, 436, 584, 616, 673, 913, 1039, 1081
HpyCH4III ACNGT 2 cut(s) 494, 731
HpyCH4IV ACGT 2 cut(s) 565, 1325
HpyCH4V TGCA 9 cut(s) 4, 122, 272, 348, 467, 704, 893, 1330, 1335
HpyF10VI GCNNNNNNNGC 3 cut(s) 602, 965, 1025
HpyF3I CTNAG 6 cut(s) 63, 101, 826, 1149, 1222, 1553
HpySE526I ACGT 2 cut(s) 565, 1325
Hsp92II CATG 8 cut(s) 100, 122, 560, 764, 912, 1173, 1295, 1587
HspAI GCGC 4 cut(s) 521, 862, 959, 1449
Ksp22I TGATCA 2 cut(s) 190, 1440
Kzo9I GATC 7 cut(s) 190, 577, 1103, 1112, 1358, 1406, 1440
LmnI GCTCC 4 cut(s) 593, 787, 1189, 1464
Lsp1109I GCAGC 3 cut(s) 309, 1028, 1100
LweI GCATC 3 cut(s) 65, 439, 676
MaeI CTAG 6 cut(s) 263, 305, 807, 1176, 1658, 1699
MaeII ACGT 2 cut(s) 565, 1325
MaeIII GTNAC 4 cut(s) 780, 829, 973, 1256
MalI GATC 7 cut(s) 192, 579, 1105, 1114, 1360, 1408, 1442
MboI GATC 7 cut(s) 190, 577, 1103, 1112, 1358, 1406, 1440
MboII GAAGA 8 cut(s) 167, 224, 520, 934, 1075, 1280, 1355, 1396
MluCI AATT 8 cut(s) 27, 109, 180, 258, 317, 814, 1476, 1561
MlyI GAGTC 4 cut(s) 340, 1286, 1309, 1514
MmeI TCCRAC 1 cut(s) 1151
MseI TTAA 6 cut(s) 426, 459, 696, 813, 1434, 1649
MslI CAYNNNNRTG 2 cut(s) 123, 243
MspA1I CMGCKG 2 cut(s) 1019, 1446
MspI CCGG 1 cut(s) 667
MvnI CGCG 1 cut(s) 1573
MwoI GCNNNNNNNGC 3 cut(s) 602, 965, 1025
NdeI CATATG 1 cut(s) 1320
NdeII GATC 7 cut(s) 190, 577, 1103, 1112, 1358, 1406, 1440
NlaIII CATG 8 cut(s) 100, 122, 560, 764, 912, 1173, 1295, 1587
NlaIV GGNNCC 3 cut(s) 789, 1191, 1460
NmuCI GTSAC 3 cut(s) 829, 973, 1256
NruI TCGCGA 1 cut(s) 1573
NsbI TGCGCA 1 cut(s) 522
NspI RCATGY 1 cut(s) 122
NspV TTCGAA 1 cut(s) 210
PaeI GCATGC 1 cut(s) 122
PaeR7I CTCGAG 1 cut(s) 1213
PceI AGGCCT 2 cut(s) 605, 1028
PinAI ACCGGT 1 cut(s) 666
PkrI GCNGC 4 cut(s) 324, 1018, 1090, 1448
PleI GAGTC 4 cut(s) 339, 1285, 1309, 1513
PpsI GAGTC 4 cut(s) 339, 1285, 1309, 1513
PpuMI RGGWCCY 1 cut(s) 1218
PshBI ATTAAT 1 cut(s) 813
PsiI TTATAA 1 cut(s) 951
Psp1406I AACGTT 1 cut(s) 565
Psp5II RGGWCCY 1 cut(s) 1218
PspFI CCCAGC 2 cut(s) 1470, 1633
PspN4I GGNNCC 3 cut(s) 789, 1191, 1460
PspPI GGNCC 3 cut(s) 803, 1218, 1631
PspPPI RGGWCCY 1 cut(s) 1218
PspXI VCTCGAGB 1 cut(s) 1213
PstNI CAGNNNCTG 2 cut(s) 746, 1148
PvuII CAGCTG 1 cut(s) 1019
RruI TCGCGA 1 cut(s) 1573
RsaI GTAC 3 cut(s) 136, 1427, 1697
RsaNI GTAC 3 cut(s) 135, 1426, 1696
RseI CAYNNNNRTG 2 cut(s) 123, 243
SaqAI TTAA 6 cut(s) 426, 459, 696, 813, 1434, 1649
SatI GCNGC 4 cut(s) 323, 1017, 1089, 1447
Sau3AI GATC 7 cut(s) 190, 577, 1103, 1112, 1358, 1406, 1440
Sau96I GGNCC 3 cut(s) 803, 1218, 1631
ScaI AGTACT 1 cut(s) 136
SchI GAGTC 4 cut(s) 340, 1286, 1309, 1514
SfaNI GCATC 3 cut(s) 65, 439, 676
Sfr274I CTCGAG 1 cut(s) 1213
SfuI TTCGAA 1 cut(s) 210
SinI GGWCC 2 cut(s) 803, 1218
SlaI CTCGAG 1 cut(s) 1213
SmiMI CAYNNNNRTG 2 cut(s) 123, 243
SmlI CTYRAG 1 cut(s) 1213
SmoI CTYRAG 1 cut(s) 1213
SphI GCATGC 1 cut(s) 122
Sse9I AATT 8 cut(s) 27, 109, 180, 258, 317, 814, 1476, 1561
SseBI AGGCCT 2 cut(s) 605, 1028
SsiI CCGC 2 cut(s) 1446, 1667
SspMI CTAG 6 cut(s) 263, 305, 807, 1176, 1658, 1699
StuI AGGCCT 2 cut(s) 605, 1028
StyI CCWWGG 2 cut(s) 716, 806
TaaI ACNGT 2 cut(s) 494, 731
TaiI ACGT 2 cut(s) 568, 1328
TaqI TCGA 5 cut(s) 16, 147, 210, 756, 1214
TasI AATT 8 cut(s) 27, 109, 180, 258, 317, 814, 1476, 1561
TatI WGTACW 3 cut(s) 134, 1425, 1695
TauI GCSGC 1 cut(s) 1449
Tru1I TTAA 6 cut(s) 426, 459, 696, 813, 1434, 1649
Tru9I TTAA 6 cut(s) 426, 459, 696, 813, 1434, 1649
TscAI CASTG 5 cut(s) 250, 838, 1191, 1303, 1561
TseFI GTSAC 3 cut(s) 829, 973, 1256
TseI GCWGC 3 cut(s) 322, 1016, 1088
Tsp45I GTSAC 3 cut(s) 829, 973, 1256
TspGWI ACGGA 1 cut(s) 167
TspRI CASTG 5 cut(s) 250, 838, 1191, 1303, 1561
VpaK11BI GGWCC 2 cut(s) 803, 1218
VspI ATTAAT 1 cut(s) 813
XapI RAATTY 4 cut(s) 27, 258, 1476, 1561
XbaI TCTAGA 1 cut(s) 262
XceI RCATGY 1 cut(s) 122
XhoI CTCGAG 1 cut(s) 1213
XmaJI CCTAGG 1 cut(s) 806
XmiI GTMKAC 1 cut(s) 1096
XspI CTAG 6 cut(s) 263, 305, 807, 1176, 1658, 1699
ZrmI AGTACT 1 cut(s) 136
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.