Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0000197

Physical Location & Seq

Genomic Coordinates Reverse (-)

20983780 .. 20987146

Gene Structure 3367 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1094700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGGCTGCCAATAGAAACCGCTTCACCAGAGCAGGTGACCTGTCGGTGCCAGTGGGATTCCGGTTCCGCCCCACAGAAGAAGAGCTGATCGACTATTACTTGCAGATGAAGCTCGAGGGTGAGGATTACCTTGTCAGCGAGGTCATCCGTGAAATCAATATCTGCAACCACGAGCCAAGGGACTTGCCTGGGCTTTCACTCTTAAAGTCGGATGATCAAGAATGGTACTTCTTCAGCACTTACAAAAAAAACAGCAAAAACCAGACCGAAAGGGCGACGAAGGAAGGCTTCTGGAAGAGCACTGGTCCCCAAAAACTGGTCAAGACTCAAGACAAAAGAACTATCATCGGTAAAAAAAGGATTCTAACTTTTCAACGAGGTCGTGTTCGTAATTCCAAAAAGACCGACTGGGTTATGCATGAGTATTACATCCCCCAAACCAATCCTAATGCTAATCAGAGGGATTTCGTTCTCTGTTGCATAAAGAAGAAATCAGGTGAGAATGTTTATGCTGCAAACTGTGATGAAGGTGAATCTGGTACTTGCAACAATGAATCTGATTTCGAAAATCAACTGCTACTAGCACCTGGTATGGATATTGAAGAGGAGCGTACTCAGCAACAACAAAGCATGGACTATTTTGAGAGGGAAAAGGTTCGTATGCTTGCAAGTGCCCCTGGTAATAATGATTACCATGGGTTACAATCTGCATTTGGAGCTGATGGACCGGATGATACGTTCGAAGAGTTCTTATGTTCAGTTATTGTTGACGGGAATCAGGATGAAACAACTCATGCTAACATCTTCAACGACTCCACTCCGCCACAGCCAATTATGAGGGTGTATTTTGAGGATGAAGCATTAAGCAGTGACACAGACCCAGAAGTACTACTTGCACAGGAAATAAGTTTACAAATGCTTAGTGAGCCACCAGTTGATTCGAGCCACTCCAGAAGAAAGGAAGGTGTAATGCTTTACCAGACACAGGCTGCTTCCTCTGTCAATGTAGTACCTAAACCTCAGACTGATCGTCTTCAAGTAGTCACTGATGAACATTCTGGTACACATCGTAGTCAATTAGTTAATGACAAGCATTCTGGTACACATCAAAGAACAAGCAGGCCGCAACGTGAATCAAGACACAATAATGCCTTAAACGTAAAGAATGCTTCCCCTGTGGATGTAGATGCAGAATTACGTCAGATTAAATGTATTCGATTAGCCCCTGATGAATACTATAACAATGAAAGAACACGTGGAAGAACATATCCAACAAGTACCCTCGAAGCACTAAGCAAACAGAAAGAATTAAAACAGCAGCAAAGCAAGGCGAAAGAAGTTGCAGAGCGTCGAGCTGCTGTTGATTTTCCCCCGAAGAAGACCTCTGTAACAAAGTCTAACAAAGAAGCAGATGTGGCTCAAGGCAATAATGCAGAAAAGGGTCTGAAGCAGATGCAGAACGCAACAACCGCCGGCAATTGGAAGGACTGTTTCATTTCATGGGAGACATCCCCTCCATTAACAAGTCCCCCATCGGTGTACCTTTTCAACATGGTTGTAGTTGTAGGCTGCGTTTTAGTTTTATACGGGCAGTGGTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016020 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071944 GO:0080090 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

534

Amino Acids

60.64

Weight (kDa)

5.83

Isoelectric Point (pI)

43.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	17 - 143	4.3e-36	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000197)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g18010 FvH4_7g18010 FvH4_7g18021 FvH4_7g18070 FvH4_7g18070 FvH4_7g18200 FvH4_7g18250
malus_domestica	MD01G1092200.v1.1 MD01G1092500.v1.1 MD01G1092600.v1.1 MD01G1092900.v1.1 MD01G1093000.v1.1 MD01G1093200.v1.1 MD01G1093500.v1.1 MD01G1093700.v1.1 MD01G1093800.v1.1 MD01G1093900.v1.1 MD01G1094000.v1.1 MD01G1094200.v1.1 MD01G1094400.v1.1 MD01G1094500.v1.1 MD01G1094700.v1.1 MD01G1094800.v1.1 MD01G1095100.v1.1 MD07G1162700.v1.1 MD07G1163200.v1.1 MD07G1163400.v1.1 MD07G1163700.v1.1 MD07G1164000.v1.1 MD10G1186100.v1.1
prunus_persica	Prupe.2G201200_v2.0.a1 Prupe.2G201200_v2.0.a1 Prupe.2G201300_v2.0.a1 Prupe.2G201800_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202800_v2.0.a1 Prupe.2G202900_v2.0.a1 Prupe.2G203000_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204900_v2.0.a1
pyrus_communis	pycom01g11610 pycom01g11650 pycom01g11670 pycom01g11680 pycom01g11700 pycom01g11710 pycom01g11720 pycom01g11730 pycom07g15770 pycom07g15860 pycom07g15870 pycom07g15890 pycom07g15900 pycom07g15920
rosa_chinensis	RchiOBHm_Chr1g0333731 RchiOBHm_Chr1g0361411 RchiOBHm_Chr1g0361501 RchiOBHm_Chr1g0361551 RchiOBHm_Chr1g0361631 RchiOBHm_Chr1g0361691 RchiOBHm_Chr1g0361701
rosa_laevigata	RLG00000011640 RLG00000014882 RLG00000027709 RLG00000027713 RLG00000027717 RLG00000027719 RLG00000029532 RLG00000030171 RLG00000030174 RLG00000030177 RLG00000030181 RLG00000030186
rosa_multiflora	Rmu_co8135790.1_g000001 Rmu_co8371689.1_g000001 Rmu_co8391943.1_g000001 Rmu_co8469521.1_g000001 Rmu_co8502503.1_g000002 Rmu_sc0001034.1_g000001 Rmu_sc0002119.1_g000002 Rmu_sc0002119.1_g000009 Rmu_sc0002119.1_g000019 Rmu_sc0003426.1_g000005 Rmu_sc0003693.1_g000010 Rmu_sc0003704.1_g000007 Rmu_sc0006101.1_g000005 Rmu_sc0006417.1_g000006 Rmu_sc0007217.1_g000012 Rmu_sc0010384.1_g000001 Rmu_sc0011258.1_g000003 Rmu_sc0017253.1_g000002 Rmu_ssc0000062.1_g000022
rosa_roxburghii	Rroxscaffold_159G00432930 Rroxscaffold_159G00433040 Rroxscaffold_159G00433060 Rroxscaffold_4G00294780 Rroxscaffold_4G00294810 Rroxscaffold_4G00294870 Rroxscaffold_4G00294930 Rroxscaffold_4G00294950 Rroxscaffold_4G00317240 Rroxscaffold_4G00325190 Rroxscaffold_4G00325210
rosa_rugosa	Rorug01G0047400 Rorug01G0047800 Rorug01G0048100 Rorug01G0048100 Rorug01G0111500 Rorug01G0111500 Rorug01G0289800 Rorug01G0290300 Rorug01G0290700 Rorug01G0290900
rosa_samantha	Rh1AG063000 Rh1AG064000 Rh1AG064400 Rh1AG133700 Rh1AG300300 Rh1AG300900 Rh1AG301000 Rh1AG301100 Rh1BG263800 Rh1BG264000 Rh1BG264100 Rh1CG281800 Rh1CG282100 Rh1CG282200 Rh1DG294000 Rh1DG294100 Rh5BG200600
rosa_wichuraiana	Rw1G005400 Rw1G011170 Rw1G026570 Rw1G026580 Rw1G026610 Rw1G026640 Rw1G026670 Rw1G026700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	23
Acc36I	ACCTGC	1 cut(s)	23
AccB1I	GGYRCC	1 cut(s)	46
AccB7I	CCANNNNNTGG	1 cut(s)	316
AciI	CCGC	5 cut(s)	19, 67, 821, 1124, 1470
AcuI	CTGAAG	2 cut(s)	217, 1466
AcvI	CACGTG	1 cut(s)	1256
AfaI	GTAC	9 cut(s)	227, 541, 613, 888, 1011, 1063, 1102, 1279, 1541
AfiI	CCNNNNNNNGG	3 cut(s)	316, 985, 1479
AflIII	ACRYGT	1 cut(s)	1253
AgsI	TTSAA	5 cut(s)	374, 602, 808, 1037, 1549
AhdI	GACNNNNNGTC	1 cut(s)	1029
AjnI	CCWGG	3 cut(s)	187, 586, 676
AloI	GAACNNNNNNTCC	2 cut(s)	722, 754
AluBI	AGCT	4 cut(s)	85, 112, 719, 1355
AluI	AGCT	4 cut(s)	85, 112, 719, 1355
Alw21I	GWGCWC	1 cut(s)	302
Alw26I	GTCTC	1 cut(s)	1499
Ama87I	CYCGRG	1 cut(s)	113
AoxI	GGCC	1 cut(s)	1121
ApeKI	GCWGC	6 cut(s)	5, 512, 989, 1318, 1355, 1569
Asp700I	GAANNNNTTC	1 cut(s)	654
AspS9I	GGNCC	2 cut(s)	305, 725
AsuHPI	GGTGA	5 cut(s)	16, 47, 131, 509, 542
AsuII	TTCGAA	2 cut(s)	564, 741
AvaI	CYCGRG	1 cut(s)	113
AvaII	GGWCC	2 cut(s)	305, 725
BaeGI	GKGCMC	1 cut(s)	676
BanI	GGYRCC	1 cut(s)	46
BauI	CACGAG	1 cut(s)	170
BbrPI	CACGTG	1 cut(s)	1256
BbsI	GAAGAC	2 cut(s)	1025, 1385
Bbv12I	GWGCWC	1 cut(s)	302
BbvI	GCAGC	5 cut(s)	499, 976, 1330, 1342, 1556
BccI	CCATC	2 cut(s)	716, 1540
BciT130I	CCWGG	3 cut(s)	189, 588, 678
BclI	TGATCA	1 cut(s)	214
BcoDI	GTCTC	1 cut(s)	1499
BfaI	CTAG	2 cut(s)	581, 1600
BfuAI	ACCTGC	1 cut(s)	23
BisI	GCNGC	7 cut(s)	6, 513, 990, 1124, 1319, 1356, 1570
BlsI	GCNGC	7 cut(s)	7, 514, 991, 1125, 1320, 1357, 1571
BmcAI	AGTACT	1 cut(s)	888
Bme1390I	CCNGG	3 cut(s)	189, 588, 678
Bme18I	GGWCC	2 cut(s)	305, 725
BmeRI	GACNNNNNGTC	1 cut(s)	1029
BmeT110I	CYCGRG	1 cut(s)	113
BmgT120I	GGNCC	2 cut(s)	305, 725
BmiI	GGNNCC	3 cut(s)	48, 65, 307
BmrFI	CCNGG	3 cut(s)	189, 588, 678
BmrI	ACTGGG	1 cut(s)	418
BmsI	GCATC	2 cut(s)	1177, 1443
BmuI	ACTGGG	1 cut(s)	418
BpiI	GAAGAC	2 cut(s)	1025, 1385
BpmI	CTGGAG	1 cut(s)	934
Bpu14I	TTCGAA	2 cut(s)	564, 741
BpuEI	CTTGAG	2 cut(s)	312, 1404
BsaAI	YACGTR	1 cut(s)	1256
BsaJI	CCNNGG	4 cut(s)	176, 188, 676, 694
BsaWI	WCCGGW	2 cut(s)	60, 727
BsaXI	ACNNNNNCTCC	2 cut(s)	1498, 1528
Bsc4I	CCNNNNNNNGG	3 cut(s)	316, 985, 1479
Bse118I	RCCGGY	1 cut(s)	1472
Bse1I	ACTGG	5 cut(s)	50, 307, 321, 413, 932
BseBI	CCWGG	3 cut(s)	189, 588, 678
BseDI	CCNNGG	4 cut(s)	176, 188, 676, 694
BseGI	GGATG	8 cut(s)	144, 217, 429, 736, 787, 859, 1186, 1508
BseLI	CCNNNNNNNGG	3 cut(s)	316, 985, 1479
BseMII	CTCAG	2 cut(s)	629, 1034
BseNI	ACTGG	5 cut(s)	50, 307, 321, 413, 932
BseRI	GAGGAG	1 cut(s)	620
BseSI	GKGCMC	1 cut(s)	676
BseXI	GCAGC	5 cut(s)	499, 976, 1330, 1342, 1556
BshFI	GGCC	1 cut(s)	1123
BshNI	GGYRCC	1 cut(s)	46
BsiHKAI	GWGCWC	1 cut(s)	302
BsiHKCI	CYCGRG	1 cut(s)	113
BsiSI	CCGG	3 cut(s)	61, 728, 1473
BslFI	GGGAC	3 cut(s)	194, 291, 1512
BslI	CCNNNNNNNGG	3 cut(s)	316, 985, 1479
BsmAI	GTCTC	1 cut(s)	1499
BsmFI	GGGAC	3 cut(s)	194, 291, 1512
BsmI	GAATGC	2 cut(s)	1093, 1171
BsnI	GGCC	1 cut(s)	1123
BsoBI	CYCGRG	1 cut(s)	113
Bsp119I	TTCGAA	2 cut(s)	564, 741
Bsp1286I	GDGCHC	2 cut(s)	302, 676
Bsp143I	GATC	3 cut(s)	87, 214, 1027
Bsp19I	CCATGG	1 cut(s)	694
BspACI	CCGC	5 cut(s)	19, 67, 821, 1124, 1470
BspANI	GGCC	1 cut(s)	1123
BspCNI	CTCAG	2 cut(s)	628, 1033
BspLI	GGNNCC	3 cut(s)	48, 65, 307
BspMI	ACCTGC	1 cut(s)	23
BspQI	GCTCTTC	2 cut(s)	75, 290
BspT104I	TTCGAA	2 cut(s)	564, 741
BspT107I	GGYRCC	1 cut(s)	46
BsrFI	RCCGGY	1 cut(s)	1472
BsrI	ACTGG	5 cut(s)	50, 307, 321, 413, 932
BssAI	RCCGGY	1 cut(s)	1472
BssECI	CCNNGG	4 cut(s)	176, 188, 676, 694
BssMI	GATC	3 cut(s)	87, 214, 1027
BssSI	CACGAG	1 cut(s)	170
BssT1I	CCWWGG	2 cut(s)	176, 694
Bst2BI	CACGAG	1 cut(s)	170
Bst2UI	CCWGG	3 cut(s)	189, 588, 678
Bst4CI	ACNGT	2 cut(s)	521, 1490
Bst6I	CTCTTC	4 cut(s)	75, 290, 597, 738
BstBAI	YACGTR	1 cut(s)	1256
BstBI	TTCGAA	2 cut(s)	564, 741
BstC8I	GCNNGC	3 cut(s)	666, 1121, 1474
BstDEI	CTNAG	4 cut(s)	615, 920, 1020, 1292
BstDSI	CCRYGG	1 cut(s)	694
BstEII	GGTNACC	1 cut(s)	35
BstF5I	GGATG	8 cut(s)	144, 217, 429, 736, 787, 859, 1186, 1508
BstKTI	GATC	3 cut(s)	90, 217, 1030
BstMAI	GTCTC	1 cut(s)	1499
BstMBI	GATC	3 cut(s)	87, 214, 1027
BstMWI	GCNNNNNNNGC	6 cut(s)	109, 616, 716, 925, 1415, 1469
BstNI	CCWGG	3 cut(s)	189, 588, 678
BstPI	GGTNACC	1 cut(s)	35
BstSCI	CCNGG	3 cut(s)	187, 586, 676
BstSLI	GKGCMC	1 cut(s)	676
BstV1I	GCAGC	5 cut(s)	499, 976, 1330, 1342, 1556
BstV2I	GAAGAC	2 cut(s)	1025, 1385
BsuRI	GGCC	1 cut(s)	1123
BtgI	CCRYGG	1 cut(s)	694
BtsCI	GGATG	8 cut(s)	144, 217, 429, 736, 787, 859, 1186, 1508
BtsI	GCAGTG	2 cut(s)	874, 1598
BtsIMutI	CAGTG	5 cut(s)	57, 300, 874, 1044, 1598
BveI	ACCTGC	1 cut(s)	23
Cac8I	GCNNGC	3 cut(s)	666, 1121, 1474
Cfr10I	RCCGGY	1 cut(s)	1472
Cfr13I	GGNCC	2 cut(s)	305, 725
CseI	GACGC	1 cut(s)	1337
CsiI	ACCWGGT	1 cut(s)	586
Csp6I	GTAC	9 cut(s)	226, 540, 612, 887, 1010, 1062, 1101, 1278, 1540
CviAII	CATG	6 cut(s)	419, 631, 695, 794, 1500, 1552
CviQI	GTAC	9 cut(s)	226, 540, 612, 887, 1010, 1062, 1101, 1278, 1540
DdeI	CTNAG	4 cut(s)	615, 920, 1020, 1292
DpnI	GATC	3 cut(s)	89, 216, 1029
DpnII	GATC	3 cut(s)	87, 214, 1027
DriI	GACNNNNNGTC	1 cut(s)	1029
Eam1104I	CTCTTC	4 cut(s)	75, 290, 597, 738
Eam1105I	GACNNNNNGTC	1 cut(s)	1029
EarI	CTCTTC	4 cut(s)	75, 290, 597, 738
EciI	GGCGGA	2 cut(s)	56, 810
Eco130I	CCWWGG	2 cut(s)	176, 694
Eco47I	GGWCC	2 cut(s)	305, 725
Eco57I	CTGAAG	2 cut(s)	217, 1466
Eco72I	CACGTG	1 cut(s)	1256
Eco88I	CYCGRG	1 cut(s)	113
Eco91I	GGTNACC	1 cut(s)	35
EcoO65I	GGTNACC	1 cut(s)	35
EcoRII	CCWGG	3 cut(s)	187, 586, 676
EcoT14I	CCWWGG	2 cut(s)	176, 694
EcoT22I	ATGCAT	1 cut(s)	420
ErhI	CCWWGG	2 cut(s)	176, 694
FaeI	CATG	6 cut(s)	422, 634, 698, 797, 1503, 1555
FalI	AAGNNNNNCTT	4 cut(s)	272, 304, 876, 908
FaqI	GGGAC	3 cut(s)	194, 291, 1512
FatI	CATG	6 cut(s)	418, 630, 694, 793, 1499, 1551
FbaI	TGATCA	1 cut(s)	214
Fnu4HI	GCNGC	7 cut(s)	6, 513, 990, 1124, 1319, 1356, 1570
FokI	GGATG	8 cut(s)	131, 224, 416, 743, 794, 866, 1193, 1495
Fsp4HI	GCNGC	7 cut(s)	6, 513, 990, 1124, 1319, 1356, 1570
FspBI	CTAG	2 cut(s)	581, 1600
GluI	GCNGC	7 cut(s)	6, 513, 990, 1124, 1319, 1356, 1570
GsuI	CTGGAG	1 cut(s)	934
HaeIII	GGCC	1 cut(s)	1123
HapII	CCGG	3 cut(s)	61, 728, 1473
HgaI	GACGC	1 cut(s)	1337
Hin1II	CATG	6 cut(s)	422, 634, 698, 797, 1503, 1555
HincII	GTYRAC	1 cut(s)	769
HindII	GTYRAC	1 cut(s)	769
HinfI	GANTC	9 cut(s)	57, 325, 361, 533, 554, 775, 812, 938, 1133
HpaII	CCGG	3 cut(s)	61, 728, 1473
HphI	GGTGA	5 cut(s)	16, 47, 131, 509, 542
Hpy166II	GTNNAC	5 cut(s)	769, 911, 1064, 1103, 1540
Hpy188I	TCNGA	6 cut(s)	211, 459, 559, 1023, 1203, 1446
Hpy188III	TCNNGA	7 cut(s)	218, 292, 322, 329, 779, 951, 1137
Hpy8I	GTNNAC	5 cut(s)	769, 911, 1064, 1103, 1540
Hpy99I	CGWCG	2 cut(s)	280, 1353
HpyAV	CCTTC	5 cut(s)	274, 278, 521, 956, 1477
HpyCH4III	ACNGT	2 cut(s)	521, 1490
HpyCH4IV	ACGT	5 cut(s)	737, 1129, 1158, 1198, 1255
HpyF10VI	GCNNNNNNNGC	6 cut(s)	109, 616, 716, 925, 1415, 1469
HpyF3I	CTNAG	4 cut(s)	615, 920, 1020, 1292
HpySE526I	ACGT	5 cut(s)	737, 1129, 1158, 1198, 1255
Hsp92II	CATG	6 cut(s)	422, 634, 698, 797, 1503, 1555
KroI	GCCGGC	1 cut(s)	1472
KroNI	GCCGGC	1 cut(s)	1474
Ksp22I	TGATCA	1 cut(s)	214
Kzo9I	GATC	3 cut(s)	87, 214, 1027
LguI	GCTCTTC	2 cut(s)	75, 290
LmnI	GCTCC	2 cut(s)	607, 716
Lsp1109I	GCAGC	5 cut(s)	499, 976, 1330, 1342, 1556
LweI	GCATC	2 cut(s)	1177, 1443
MabI	ACCWGGT	1 cut(s)	586
MaeI	CTAG	2 cut(s)	581, 1600
MaeII	ACGT	5 cut(s)	737, 1129, 1158, 1198, 1255
MaeIII	GTNAC	5 cut(s)	35, 699, 869, 1042, 1387
MalI	GATC	3 cut(s)	89, 216, 1029
MboI	GATC	3 cut(s)	87, 214, 1027
MfeI	CAATTG	1 cut(s)	1477
MhlI	GDGCHC	2 cut(s)	302, 676
MluCI	AATT	6 cut(s)	391, 831, 1076, 1193, 1307, 1477
MlyI	GAGTC	2 cut(s)	319, 806
MmeI	TCCRAC	2 cut(s)	189, 1295
Mph1103I	ATGCAT	1 cut(s)	420
MroNI	GCCGGC	1 cut(s)	1472
MroXI	GAANNNNTTC	1 cut(s)	654
MseI	TTAA	7 cut(s)	203, 863, 1083, 1154, 1206, 1310, 1520
MslI	CAYNNNNRTG	1 cut(s)	1146
MspI	CCGG	3 cut(s)	61, 728, 1473
MspR9I	CCNGG	3 cut(s)	189, 588, 678
MunI	CAATTG	1 cut(s)	1477
Mva1269I	GAATGC	2 cut(s)	1093, 1171
MvaI	CCWGG	3 cut(s)	189, 588, 678
MwoI	GCNNNNNNNGC	6 cut(s)	109, 616, 716, 925, 1415, 1469
NaeI	GCCGGC	1 cut(s)	1474
NcoI	CCATGG	1 cut(s)	694
NdeII	GATC	3 cut(s)	87, 214, 1027
NgoMIV	GCCGGC	1 cut(s)	1472
NlaIII	CATG	6 cut(s)	422, 634, 698, 797, 1503, 1555
NlaIV	GGNNCC	3 cut(s)	48, 65, 307
NmuCI	GTSAC	3 cut(s)	35, 869, 1042
NsiI	ATGCAT	1 cut(s)	420
NspV	TTCGAA	2 cut(s)	564, 741
PaeR7I	CTCGAG	1 cut(s)	113
PaqCI	CACCTGC	1 cut(s)	23
PciSI	GCTCTTC	2 cut(s)	75, 290
PctI	GAATGC	2 cut(s)	1093, 1171
PdiI	GCCGGC	1 cut(s)	1474
PdmI	GAANNNNTTC	1 cut(s)	654
PfeI	GAWTC	7 cut(s)	57, 361, 533, 554, 775, 938, 1133
PflMI	CCANNNNNTGG	1 cut(s)	316
PkrI	GCNGC	7 cut(s)	7, 514, 991, 1125, 1320, 1357, 1571
PleI	GAGTC	2 cut(s)	319, 806
PmaCI	CACGTG	1 cut(s)	1256
PmlI	CACGTG	1 cut(s)	1256
PpsI	GAGTC	2 cut(s)	319, 806
Ppu21I	YACGTR	1 cut(s)	1256
Psp6I	CCWGG	3 cut(s)	187, 586, 676
PspCI	CACGTG	1 cut(s)	1256
PspEI	GGTNACC	1 cut(s)	35
PspGI	CCWGG	3 cut(s)	187, 586, 676
PspN4I	GGNNCC	3 cut(s)	48, 65, 307
PspPI	GGNCC	2 cut(s)	305, 725
PspXI	VCTCGAGB	1 cut(s)	113
RsaI	GTAC	9 cut(s)	227, 541, 613, 888, 1011, 1063, 1102, 1279, 1541
RsaNI	GTAC	9 cut(s)	226, 540, 612, 887, 1010, 1062, 1101, 1278, 1540
RseI	CAYNNNNRTG	1 cut(s)	1146
SapI	GCTCTTC	2 cut(s)	75, 290
SaqAI	TTAA	7 cut(s)	203, 863, 1083, 1154, 1206, 1310, 1520
SatI	GCNGC	7 cut(s)	6, 513, 990, 1124, 1319, 1356, 1570
Sau3AI	GATC	3 cut(s)	87, 214, 1027
Sau96I	GGNCC	2 cut(s)	305, 725
ScaI	AGTACT	1 cut(s)	888
SchI	GAGTC	2 cut(s)	319, 806
ScrFI	CCNGG	3 cut(s)	189, 588, 678
SduI	GDGCHC	2 cut(s)	302, 676
SexAI	ACCWGGT	1 cut(s)	586
SfaNI	GCATC	2 cut(s)	1177, 1443
Sfr274I	CTCGAG	1 cut(s)	113
SfuI	TTCGAA	2 cut(s)	564, 741
SinI	GGWCC	2 cut(s)	305, 725
SlaI	CTCGAG	1 cut(s)	113
SmiMI	CAYNNNNRTG	1 cut(s)	1146
SmlI	CTYRAG	3 cut(s)	113, 327, 1419
SmoI	CTYRAG	3 cut(s)	113, 327, 1419
Sse9I	AATT	6 cut(s)	391, 831, 1076, 1193, 1307, 1477
SsiI	CCGC	5 cut(s)	19, 67, 821, 1124, 1470
SspMI	CTAG	2 cut(s)	581, 1600
StyD4I	CCNGG	3 cut(s)	187, 586, 676
StyI	CCWWGG	2 cut(s)	176, 694
TaaI	ACNGT	2 cut(s)	521, 1490
TaiI	ACGT	5 cut(s)	740, 1132, 1161, 1201, 1258
TaqI	TCGA	8 cut(s)	90, 114, 564, 741, 941, 1216, 1284, 1351
TaqII	GACCGA	2 cut(s)	281, 419
TasI	AATT	6 cut(s)	391, 831, 1076, 1193, 1307, 1477
TatI	WGTACW	1 cut(s)	886
TauI	GCSGC	1 cut(s)	1126
TfiI	GAWTC	7 cut(s)	57, 361, 533, 554, 775, 938, 1133
Tru1I	TTAA	7 cut(s)	203, 863, 1083, 1154, 1206, 1310, 1520
Tru9I	TTAA	7 cut(s)	203, 863, 1083, 1154, 1206, 1310, 1520
TscAI	CASTG	5 cut(s)	57, 307, 874, 1051, 1598
TseFI	GTSAC	3 cut(s)	35, 869, 1042
TseI	GCWGC	6 cut(s)	5, 512, 989, 1318, 1355, 1569
Tsp45I	GTSAC	3 cut(s)	35, 869, 1042
TspGWI	ACGGA	1 cut(s)	137
TspRI	CASTG	5 cut(s)	57, 307, 874, 1051, 1598
Van91I	CCANNNNNTGG	1 cut(s)	316
VpaK11BI	GGWCC	2 cut(s)	305, 725
XhoI	CTCGAG	1 cut(s)	113
XmnI	GAANNNNTTC	1 cut(s)	654
XspI	CTAG	2 cut(s)	581, 1600
ZrmI	AGTACT	1 cut(s)	888
Zsp2I	ATGCAT	1 cut(s)	420

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.