Prupe.2G204900_v2.0.a1
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000197
Physical Location & Seq
Forward (+)
23987662 .. 23989315
1654 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G204900.1

Sequence Viewer

Length: 552 bp
ATGAACAGCTACTTCGGATTGGATCCCACTGAAGAACAATTGGTGAGCTTCTTGAGGGAGAAGAAACAGATTGACCACATCATCCCTGAGATTTATATCGGCAACTACGTGCCTTGGGATGTACCTGGGCTGTATGCAGGGCTGTTCGCAGAGCCAGACTCGCCACATCAGCCTATGTTCTTCTTCAGCCCAAGGGATTACAGGTACATCGACAACAACTATGCTCGCACTAACAGCGCCACTGCGCGAGGCTTCTGGAAAACCACAGGCAAAGAACGTGTGATCAAGGCTCGAGGGTCCATTTTGAGAGAGAGGACCTTGATCTTCTATGAAGGTCGTGTGCCTCCATTTAACCAGACCAACTGGATCATGCATGAATATAGTCTCATTGAAGATGAAGCCAACCCTACTCCTGAGCTGGCCCAGCAGAGGGGTTTTGTTCTGTGTTGCTTGAAGAAAATACAAGAAAAGAAGGATAGTTCAATCTTTGCTCAACCTGATGAATGGCCCTTGATTTCAGAGGAGTATCCTCAGCCAGAAGAACCGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

184

Amino Acids

21.47

Weight (kDa)

5.01

Isoelectric Point (pI)

52.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000197)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18010 FvH4_7g18010 FvH4_7g18021 FvH4_7g18070 FvH4_7g18070 FvH4_7g18200 FvH4_7g18250
malus_domestica MD01G1092200.v1.1 MD01G1092500.v1.1 MD01G1092600.v1.1 MD01G1092900.v1.1 MD01G1093000.v1.1 MD01G1093200.v1.1 MD01G1093500.v1.1 MD01G1093700.v1.1 MD01G1093800.v1.1 MD01G1093900.v1.1 MD01G1094000.v1.1 MD01G1094200.v1.1 MD01G1094400.v1.1 MD01G1094500.v1.1 MD01G1094700.v1.1 MD01G1094800.v1.1 MD01G1095100.v1.1 MD07G1162700.v1.1 MD07G1163200.v1.1 MD07G1163400.v1.1 MD07G1163700.v1.1 MD07G1164000.v1.1 MD10G1186100.v1.1
prunus_persica Prupe.2G201200_v2.0.a1 Prupe.2G201200_v2.0.a1 Prupe.2G201300_v2.0.a1 Prupe.2G201800_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202800_v2.0.a1 Prupe.2G202900_v2.0.a1 Prupe.2G203000_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204900_v2.0.a1
pyrus_communis pycom01g11610 pycom01g11650 pycom01g11670 pycom01g11680 pycom01g11700 pycom01g11710 pycom01g11720 pycom01g11730 pycom07g15770 pycom07g15860 pycom07g15870 pycom07g15890 pycom07g15900 pycom07g15920
rosa_chinensis RchiOBHm_Chr1g0333731 RchiOBHm_Chr1g0361411 RchiOBHm_Chr1g0361501 RchiOBHm_Chr1g0361551 RchiOBHm_Chr1g0361631 RchiOBHm_Chr1g0361691 RchiOBHm_Chr1g0361701
rosa_laevigata RLG00000011640 RLG00000014882 RLG00000027709 RLG00000027713 RLG00000027717 RLG00000027719 RLG00000029532 RLG00000030171 RLG00000030174 RLG00000030177 RLG00000030181 RLG00000030186
rosa_multiflora Rmu_co8135790.1_g000001 Rmu_co8371689.1_g000001 Rmu_co8391943.1_g000001 Rmu_co8469521.1_g000001 Rmu_co8502503.1_g000002 Rmu_sc0001034.1_g000001 Rmu_sc0002119.1_g000002 Rmu_sc0002119.1_g000009 Rmu_sc0002119.1_g000019 Rmu_sc0003426.1_g000005 Rmu_sc0003693.1_g000010 Rmu_sc0003704.1_g000007 Rmu_sc0006101.1_g000005 Rmu_sc0006417.1_g000006 Rmu_sc0007217.1_g000012 Rmu_sc0010384.1_g000001 Rmu_sc0011258.1_g000003 Rmu_sc0017253.1_g000002 Rmu_ssc0000062.1_g000022
rosa_roxburghii Rroxscaffold_159G00432930 Rroxscaffold_159G00433040 Rroxscaffold_159G00433060 Rroxscaffold_4G00294780 Rroxscaffold_4G00294810 Rroxscaffold_4G00294870 Rroxscaffold_4G00294930 Rroxscaffold_4G00294950 Rroxscaffold_4G00317240 Rroxscaffold_4G00325190 Rroxscaffold_4G00325210
rosa_rugosa Rorug01G0047400 Rorug01G0047800 Rorug01G0048100 Rorug01G0048100 Rorug01G0111500 Rorug01G0111500 Rorug01G0289800 Rorug01G0290300 Rorug01G0290700 Rorug01G0290900
rosa_samantha Rh1AG063000 Rh1AG064000 Rh1AG064400 Rh1AG133700 Rh1AG300300 Rh1AG300900 Rh1AG301000 Rh1AG301100 Rh1BG263800 Rh1BG264000 Rh1BG264100 Rh1CG281800 Rh1CG282100 Rh1CG282200 Rh1DG294000 Rh1DG294100 Rh5BG200600
rosa_wichuraiana Rw1G005400 Rw1G011170 Rw1G026570 Rw1G026580 Rw1G026610 Rw1G026640 Rw1G026670 Rw1G026700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 247
AclWI GGATC 3 cut(s) 17, 30, 374
AcuI CTGAAG 2 cut(s) 51, 169
AfaI GTAC 2 cut(s) 123, 206
AfiI CCNNNNNNNGG 2 cut(s) 429, 430
AflIII ACRYGT 1 cut(s) 277
AgsI TTSAA 3 cut(s) 392, 454, 483
AjnI CCWGG 1 cut(s) 124
AluBI AGCT 3 cut(s) 9, 48, 418
AluI AGCT 3 cut(s) 9, 48, 418
Alw26I GTCTC 1 cut(s) 389
AlwI GGATC 3 cut(s) 17, 30, 374
Ama87I CYCGRG 1 cut(s) 291
AoxI GGCC 2 cut(s) 420, 506
AspLEI GCGC 2 cut(s) 239, 247
AspS9I GGNCC 4 cut(s) 297, 315, 421, 507
AsuHPI GGTGA 1 cut(s) 55
AvaI CYCGRG 1 cut(s) 291
AvaII GGWCC 2 cut(s) 297, 315
BamHI GGATCC 1 cut(s) 22
BbvCI CCTCAGC 1 cut(s) 531
BciT130I CCWGG 1 cut(s) 126
BciVI GTATCC 1 cut(s) 537
BclI TGATCA 1 cut(s) 282
BcoDI GTCTC 1 cut(s) 389
BfoI RGCGCY 1 cut(s) 240
BfuI GTATCC 1 cut(s) 537
Bme1390I CCNGG 1 cut(s) 126
Bme18I GGWCC 2 cut(s) 297, 315
BmeT110I CYCGRG 1 cut(s) 291
BmgT120I GGNCC 4 cut(s) 297, 315, 421, 507
BmiI GGNNCC 2 cut(s) 24, 298
BmrFI CCNGG 1 cut(s) 126
BplI GAGNNNNNCTC 2 cut(s) 143, 175
Bpu10I CCTNAGC 2 cut(s) 414, 531
BpuEI CTTGAG 1 cut(s) 73
BsaAI YACGTR 1 cut(s) 109
BsaBI GATNNNNATC 1 cut(s) 95
BsaJI CCNNGG 3 cut(s) 113, 125, 191
BsaWI WCCGGW 1 cut(s) 544
Bsc4I CCNNNNNNNGG 2 cut(s) 429, 430
Bse1I ACTGG 1 cut(s) 368
Bse8I GATNNNNATC 1 cut(s) 95
BseBI CCWGG 1 cut(s) 126
BseDI CCNNGG 3 cut(s) 113, 125, 191
BseGI GGATG 2 cut(s) 81, 124
BseJI GATNNNNATC 1 cut(s) 95
BseLI CCNNNNNNNGG 2 cut(s) 429, 430
BseMII CTCAG 3 cut(s) 78, 405, 545
BseNI ACTGG 1 cut(s) 368
BseRI GAGGAG 1 cut(s) 536
BseYI CCCAGC 1 cut(s) 423
Bsh1236I CGCG 1 cut(s) 247
BshFI GGCC 2 cut(s) 422, 508
BsiHKCI CYCGRG 1 cut(s) 291
BsiSI CCGG 1 cut(s) 545
BslI CCNNNNNNNGG 2 cut(s) 429, 430
BsmAI GTCTC 1 cut(s) 389
BsnI GGCC 2 cut(s) 422, 508
BsoBI CYCGRG 1 cut(s) 291
Bsp143I GATC 4 cut(s) 22, 282, 321, 366
BspANI GGCC 2 cut(s) 422, 508
BspCNI CTCAG 3 cut(s) 79, 406, 544
BspFNI CGCG 1 cut(s) 247
BspLI GGNNCC 2 cut(s) 24, 298
BspPI GGATC 3 cut(s) 17, 30, 374
BsrI ACTGG 1 cut(s) 368
BssECI CCNNGG 3 cut(s) 113, 125, 191
BssMI GATC 4 cut(s) 22, 282, 321, 366
BssT1I CCWWGG 2 cut(s) 113, 191
Bst2UI CCWGG 1 cut(s) 126
BstBAI YACGTR 1 cut(s) 109
BstC8I GCNNGC 2 cut(s) 226, 420
BstDEI CTNAG 3 cut(s) 87, 414, 531
BstF5I GGATG 2 cut(s) 81, 124
BstFNI CGCG 1 cut(s) 247
BstH2I RGCGCY 1 cut(s) 240
BstHHI GCGC 2 cut(s) 239, 247
BstKTI GATC 4 cut(s) 25, 285, 324, 369
BstMAI GTCTC 1 cut(s) 389
BstMBI GATC 4 cut(s) 22, 282, 321, 366
BstMWI GCNNNNNNNGC 4 cut(s) 160, 169, 234, 424
BstNI CCWGG 1 cut(s) 126
BstSCI CCNGG 1 cut(s) 124
BstUI CGCG 1 cut(s) 247
BstX2I RGATCY 1 cut(s) 22
BstYI RGATCY 1 cut(s) 22
BsuI GTATCC 1 cut(s) 537
BsuRI GGCC 2 cut(s) 422, 508
BtsCI GGATG 2 cut(s) 81, 124
BtsI GCAGTG 1 cut(s) 240
BtsIMutI CAGTG 2 cut(s) 27, 240
Cac8I GCNNGC 2 cut(s) 226, 420
CfoI GCGC 2 cut(s) 239, 247
Cfr13I GGNCC 4 cut(s) 297, 315, 421, 507
Csp6I GTAC 2 cut(s) 122, 205
CviAII CATG 2 cut(s) 370, 374
CviQI GTAC 2 cut(s) 122, 205
DdeI CTNAG 3 cut(s) 87, 414, 531
DpnI GATC 4 cut(s) 24, 284, 323, 368
DpnII GATC 4 cut(s) 22, 282, 321, 366
Eco130I CCWWGG 2 cut(s) 113, 191
Eco47I GGWCC 2 cut(s) 297, 315
Eco57I CTGAAG 2 cut(s) 51, 169
Eco88I CYCGRG 1 cut(s) 291
EcoO109I RGGNCCY 1 cut(s) 315
EcoRII CCWGG 1 cut(s) 124
EcoT14I CCWWGG 2 cut(s) 113, 191
EcoT22I ATGCAT 1 cut(s) 375
ErhI CCWWGG 2 cut(s) 113, 191
FaeI CATG 2 cut(s) 373, 377
FaiI YATR 8 cut(s) 96, 135, 176, 222, 330, 371, 375, 381
FatI CATG 2 cut(s) 369, 373
FbaI TGATCA 1 cut(s) 282
FokI GGATG 2 cut(s) 68, 131
GlaI GCGC 2 cut(s) 238, 246
GsaI CCCAGC 1 cut(s) 427
HaeII RGCGCY 1 cut(s) 240
HaeIII GGCC 2 cut(s) 422, 508
HapII CCGG 1 cut(s) 545
HhaI GCGC 2 cut(s) 239, 247
Hin1II CATG 2 cut(s) 373, 377
Hin6I GCGC 2 cut(s) 237, 245
HinP1I GCGC 2 cut(s) 237, 245
HinfI GANTC 1 cut(s) 158
HpaII CCGG 1 cut(s) 545
HphI GGTGA 1 cut(s) 55
Hpy188I TCNGA 2 cut(s) 17, 520
Hpy188III TCNNGA 3 cut(s) 52, 256, 413
HpyAV CCTTC 2 cut(s) 326, 466
HpyCH4IV ACGT 2 cut(s) 108, 277
HpyCH4V TGCA 2 cut(s) 137, 373
HpyF10VI GCNNNNNNNGC 4 cut(s) 160, 169, 234, 424
HpyF3I CTNAG 3 cut(s) 87, 414, 531
HpySE526I ACGT 2 cut(s) 108, 277
Hsp92II CATG 2 cut(s) 373, 377
HspAI GCGC 2 cut(s) 237, 245
Ksp22I TGATCA 1 cut(s) 282
Kzo9I GATC 4 cut(s) 22, 282, 321, 366
MaeII ACGT 2 cut(s) 108, 277
MalI GATC 4 cut(s) 24, 284, 323, 368
MboI GATC 4 cut(s) 22, 282, 321, 366
MboII GAAGA 8 cut(s) 44, 73, 172, 175, 316, 404, 466, 551
MfeI CAATTG 1 cut(s) 38
MflI RGATCY 1 cut(s) 22
MluCI AATT 1 cut(s) 38
MlyI GAGTC 1 cut(s) 152
MnlI CCTC 8 cut(s) 48, 242, 287, 306, 354, 423, 514, 540
Mph1103I ATGCAT 1 cut(s) 375
MseI TTAA 1 cut(s) 351
MspI CCGG 1 cut(s) 545
MspR9I CCNGG 1 cut(s) 126
MunI CAATTG 1 cut(s) 38
MvaI CCWGG 1 cut(s) 126
MvnI CGCG 1 cut(s) 247
MwoI GCNNNNNNNGC 4 cut(s) 160, 169, 234, 424
NdeII GATC 4 cut(s) 22, 282, 321, 366
NlaIII CATG 2 cut(s) 373, 377
NlaIV GGNNCC 2 cut(s) 24, 298
NsiI ATGCAT 1 cut(s) 375
PaeR7I CTCGAG 1 cut(s) 291
PcsI WCGNNNNNNNCGW 1 cut(s) 105
PleI GAGTC 1 cut(s) 152
PpsI GAGTC 1 cut(s) 152
Ppu21I YACGTR 1 cut(s) 109
PpuMI RGGWCCY 1 cut(s) 315
Psp5II RGGWCCY 1 cut(s) 315
Psp6I CCWGG 1 cut(s) 124
PspFI CCCAGC 1 cut(s) 423
PspGI CCWGG 1 cut(s) 124
PspN4I GGNNCC 2 cut(s) 24, 298
PspPI GGNCC 4 cut(s) 297, 315, 421, 507
PspPPI RGGWCCY 1 cut(s) 315
PspXI VCTCGAGB 1 cut(s) 291
PsuI RGATCY 1 cut(s) 22
RsaI GTAC 2 cut(s) 123, 206
RsaNI GTAC 2 cut(s) 122, 205
SaqAI TTAA 1 cut(s) 351
Sau3AI GATC 4 cut(s) 22, 282, 321, 366
Sau96I GGNCC 4 cut(s) 297, 315, 421, 507
SchI GAGTC 1 cut(s) 152
ScrFI CCNGG 1 cut(s) 126
Sfr274I CTCGAG 1 cut(s) 291
SinI GGWCC 2 cut(s) 297, 315
SlaI CTCGAG 1 cut(s) 291
SmlI CTYRAG 2 cut(s) 52, 291
SmoI CTYRAG 2 cut(s) 52, 291
Sse9I AATT 1 cut(s) 38
StyD4I CCNGG 1 cut(s) 124
StyI CCWWGG 2 cut(s) 113, 191
TaiI ACGT 2 cut(s) 111, 280
TaqI TCGA 2 cut(s) 210, 292
TasI AATT 1 cut(s) 38
Tru1I TTAA 1 cut(s) 351
Tru9I TTAA 1 cut(s) 351
TscAI CASTG 2 cut(s) 34, 247
TspDTI ATGAA 5 cut(s) 17, 345, 390, 411, 516
TspRI CASTG 2 cut(s) 34, 247
VpaK11BI GGWCC 2 cut(s) 297, 315
XhoI CTCGAG 1 cut(s) 291
Zsp2I ATGCAT 1 cut(s) 375
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.