Rroxscaffold_4G00294930
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000197
Physical Location & Seq
Forward (+)
14860305 .. 14863473
3169 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00294930.1

Sequence Viewer

Length: 1554 bp
ATGAGCAGAGACAAAACGACGCCGCTTTCAGTGCCGGTAGGCTACAGGTTCCTTCCCACCGAAGAGGAGCTTGTGAACCACTATTTGAAGAAGAAGATTCATGGTGGAAATGATTCCGAAATCAACCAAATCATCCCAGTAATAGACCTCTGCAAATACGAGCCAGCTGAGCTTCCTGCTTTGTTGGGGACTGAGACAGAGGCTCATGACATGGAGTGGTTCTTCTTCACCAGAAAGGCTTATAAGTACAACAAAAGCTCTCGCTCGAATAGGAGCACGAAGAAGGGATACTGGAAGATCTCAGGGAAGGAGCGTGGAATTAAAGCTCGACGATCCAAAGCTGTGATTGGGATGAAGAAGACATTGACTTTTTACCAGGGTCGTGTGCCGAAATCGAAGAAGACCAGCTGGGTCATTCATGAGTACTATCTTCCTGGAAATGGAGTTATTCAGAAGCAGGCCCAGGGCGACTTTGTTATCTGTCGCTTGAAAATTAGATCAGATAAGAAGGATTCTTTGGTCAGTAATGAAGGACAACCCAGTAGCGCGGGTGTGTCTGAAATGAATCAAGAGGGAAATGAGGAGTTGCTATTCCATCAACCTCAGCCTCTGGACTGCTGCTCCTCAGCACTGCGGCCACCGGTGTCCCAAGAGCTGGAAGCTGTTCTGCAAACCAACGGCACTAATGATGATTGTAATGAGTTACAATCACCATTTGGAGATAGTGATTCCTGTCATCAGGACAGGAATGAAGTTTCAACCTGTGATGAATATGAGACTTTGTATGATGTGTTTCCGCAGCTATGTGATCCACCAGAAGAAAATCTGGATTCACTCTTTGGTCCACATCAGCCACAAGATTACTTCCCGTCCATAATGCAGTCACCAATATACACAAAGCTGTGTTACGTACCACATCCACTCCAGCCACAAGATTACTACTCTTCCATACTGCAGTCACCAATATACACAAAGCTGGGAGATGTTCCACATCCACCGCAGCCACAAGATTACGAGCCCTCAAAGTTGCAGTCACCAATATACACAAAGCTTGGAAATGTTCCAGACGCCAATCTCTATTGTGGTGAATGCAATAATTGGCAATCTGCAATTAAGAAAAAAATTTCAACCAATGACGTTGACATACCATTTAGACAGATCATGTCTAATTCTGAAAATCAAGCTACAGATTATAGGATTCTAGAGGTGCATCATCCTCAAACCAAAGAAAATCTAGAATCAGTGGTTTATCCATTCCAGCCACAAGATTCCACATTGCAGCCACTGATGTACACAAAATTTAGAGATGCTCTACATAATATTGAATGCAATGAGTTGCAATCTTCATTTGGGGATACTGACTCTTCTCTCACAAAGTTCTTGAATACAAATTTTGCTTACCAAGATTATTACTCATCTCCTTTCATAGAATCTAACCTGCCAAGCTCACTGGGAATGGTCTACCATGGAGATAGTGGAGTAAGCAATGATACAAACACTGAAGTACAATATTCGTCTGCATTAGCTATTGGAAATACCCTCCAATGTAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

517

Amino Acids

58.63

Weight (kDa)

5.28

Isoelectric Point (pI)

65.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 12 - 143 7.4e-39 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000197)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18010 FvH4_7g18010 FvH4_7g18021 FvH4_7g18070 FvH4_7g18070 FvH4_7g18200 FvH4_7g18250
malus_domestica MD01G1092200.v1.1 MD01G1092500.v1.1 MD01G1092600.v1.1 MD01G1092900.v1.1 MD01G1093000.v1.1 MD01G1093200.v1.1 MD01G1093500.v1.1 MD01G1093700.v1.1 MD01G1093800.v1.1 MD01G1093900.v1.1 MD01G1094000.v1.1 MD01G1094200.v1.1 MD01G1094400.v1.1 MD01G1094500.v1.1 MD01G1094700.v1.1 MD01G1094800.v1.1 MD01G1095100.v1.1 MD07G1162700.v1.1 MD07G1163200.v1.1 MD07G1163400.v1.1 MD07G1163700.v1.1 MD07G1164000.v1.1 MD10G1186100.v1.1
prunus_persica Prupe.2G201200_v2.0.a1 Prupe.2G201200_v2.0.a1 Prupe.2G201300_v2.0.a1 Prupe.2G201800_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202800_v2.0.a1 Prupe.2G202900_v2.0.a1 Prupe.2G203000_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204900_v2.0.a1
pyrus_communis pycom01g11610 pycom01g11650 pycom01g11670 pycom01g11680 pycom01g11700 pycom01g11710 pycom01g11720 pycom01g11730 pycom07g15770 pycom07g15860 pycom07g15870 pycom07g15890 pycom07g15900 pycom07g15920
rosa_chinensis RchiOBHm_Chr1g0333731 RchiOBHm_Chr1g0361411 RchiOBHm_Chr1g0361501 RchiOBHm_Chr1g0361551 RchiOBHm_Chr1g0361631 RchiOBHm_Chr1g0361691 RchiOBHm_Chr1g0361701
rosa_laevigata RLG00000011640 RLG00000014882 RLG00000027709 RLG00000027713 RLG00000027717 RLG00000027719 RLG00000029532 RLG00000030171 RLG00000030174 RLG00000030177 RLG00000030181 RLG00000030186
rosa_multiflora Rmu_co8135790.1_g000001 Rmu_co8371689.1_g000001 Rmu_co8391943.1_g000001 Rmu_co8469521.1_g000001 Rmu_co8502503.1_g000002 Rmu_sc0001034.1_g000001 Rmu_sc0002119.1_g000002 Rmu_sc0002119.1_g000009 Rmu_sc0002119.1_g000019 Rmu_sc0003426.1_g000005 Rmu_sc0003693.1_g000010 Rmu_sc0003704.1_g000007 Rmu_sc0006101.1_g000005 Rmu_sc0006417.1_g000006 Rmu_sc0007217.1_g000012 Rmu_sc0010384.1_g000001 Rmu_sc0011258.1_g000003 Rmu_sc0017253.1_g000002 Rmu_ssc0000062.1_g000022
rosa_roxburghii Rroxscaffold_159G00432930 Rroxscaffold_159G00433040 Rroxscaffold_159G00433060 Rroxscaffold_4G00294780 Rroxscaffold_4G00294810 Rroxscaffold_4G00294870 Rroxscaffold_4G00294930 Rroxscaffold_4G00294950 Rroxscaffold_4G00317240 Rroxscaffold_4G00325190 Rroxscaffold_4G00325210
rosa_rugosa Rorug01G0047400 Rorug01G0047800 Rorug01G0048100 Rorug01G0048100 Rorug01G0111500 Rorug01G0111500 Rorug01G0289800 Rorug01G0290300 Rorug01G0290700 Rorug01G0290900
rosa_samantha Rh1AG063000 Rh1AG064000 Rh1AG064400 Rh1AG133700 Rh1AG300300 Rh1AG300900 Rh1AG301000 Rh1AG301100 Rh1BG263800 Rh1BG264000 Rh1BG264100 Rh1CG281800 Rh1CG282100 Rh1CG282200 Rh1DG294000 Rh1DG294100 Rh5BG200600
rosa_wichuraiana Rw1G005400 Rw1G011170 Rw1G026570 Rw1G026580 Rw1G026610 Rw1G026640 Rw1G026670 Rw1G026700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 243
Acc36I ACCTGC 1 cut(s) 1446
AccB7I CCANNNNNTGG 1 cut(s) 655
AccI GTMKAC 1 cut(s) 1461
AccII CGCG 1 cut(s) 548
AciI CCGC 5 cut(s) 23, 548, 634, 797, 998
AclWI GGATC 2 cut(s) 327, 803
AcoI YGGCCR 1 cut(s) 635
AcsI RAATTY 3 cut(s) 1122, 1298, 1390
AcuI CTGAAG 1 cut(s) 1521
AcyI GRCGYC 2 cut(s) 20, 1068
AfaI GTAC 5 cut(s) 248, 425, 912, 1292, 1506
AfiI CCNNNNNNNGG 2 cut(s) 440, 655
AgeI ACCGGT 1 cut(s) 640
AgsI TTSAA 6 cut(s) 88, 490, 759, 1128, 1325, 1384
AjnI CCWGG 3 cut(s) 375, 433, 462
AjuI GAANNNNNNNTTGG 2 cut(s) 500, 532
Alw21I GWGCWC 1 cut(s) 278
Alw26I GTCTC 3 cut(s) 3, 188, 770
AlwI GGATC 2 cut(s) 327, 803
AlwNI CAGNNNCTG 2 cut(s) 610, 1285
AoxI GGCC 2 cut(s) 459, 635
ApeKI GCWGC 4 cut(s) 618, 799, 1000, 1279
ApoI RAATTY 3 cut(s) 1122, 1298, 1390
ArsI GACNNNNNNTTYG 2 cut(s) 1016, 1048
AsiGI ACCGGT 1 cut(s) 640
Asp700I GAANNNNTTC 2 cut(s) 112, 663
AspLEI GCGC 1 cut(s) 548
AspS9I GGNCC 2 cut(s) 460, 842
AsuHPI GGTGA 6 cut(s) 220, 702, 876, 951, 1026, 1097
AvaII GGWCC 1 cut(s) 842
BanII GRGCYC 1 cut(s) 1020
BarI GAAGNNNNNNTAC 2 cut(s) 272, 304
BbsI GAAGAC 2 cut(s) 365, 407
Bbv12I GWGCWC 1 cut(s) 278
BbvCI CCTCAGC 2 cut(s) 603, 625
BbvI GCAGC 4 cut(s) 605, 811, 1012, 1291
BccI CCATC 1 cut(s) 603
BceAI ACGGC 1 cut(s) 694
BciT130I CCWGG 3 cut(s) 377, 435, 464
BciVI GTATCC 2 cut(s) 281, 1348
BcoDI GTCTC 3 cut(s) 3, 188, 770
BfaI CTAG 2 cut(s) 1202, 1235
BfmI CTRYAG 3 cut(s) 43, 953, 1185
BfuAI ACCTGC 1 cut(s) 1446
BfuI GTATCC 2 cut(s) 281, 1348
BglII AGATCT 1 cut(s) 297
BisI GCNGC 6 cut(s) 23, 619, 635, 800, 1001, 1280
BlpI GCTNAGC 1 cut(s) 168
BlsI GCNGC 6 cut(s) 24, 620, 636, 801, 1002, 1281
BmcAI AGTACT 1 cut(s) 425
Bme1390I CCNGG 3 cut(s) 377, 435, 464
Bme18I GGWCC 1 cut(s) 842
BmgT120I GGNCC 2 cut(s) 460, 842
BmiI GGNNCC 1 cut(s) 50
BmrFI CCNGG 3 cut(s) 377, 435, 464
BmrI ACTGGG 3 cut(s) 131, 534, 1460
BmsI GCATC 2 cut(s) 1219, 1297
BmuI ACTGGG 3 cut(s) 131, 534, 1460
BpiI GAAGAC 2 cut(s) 365, 407
BpmI CTGGAG 1 cut(s) 908
Bpu10I CCTNAGC 2 cut(s) 603, 625
Bpu1102I GCTNAGC 1 cut(s) 168
BsaAI YACGTR 1 cut(s) 910
BsaHI GRCGYC 2 cut(s) 20, 1068
BsaJI CCNNGG 4 cut(s) 376, 462, 463, 1465
BsaWI WCCGGW 1 cut(s) 640
BsaXI ACNNNNNCTCC 4 cut(s) 605, 635, 906, 936
Bsc4I CCNNNNNNNGG 2 cut(s) 440, 655
Bse118I RCCGGY 2 cut(s) 34, 640
Bse1I ACTGG 4 cut(s) 137, 296, 540, 1455
Bse3DI GCAATG 3 cut(s) 1274, 1336, 1492
BseBI CCWGG 3 cut(s) 377, 435, 464
BseDI CCNNGG 4 cut(s) 376, 462, 463, 1465
BseGI GGATG 5 cut(s) 132, 357, 916, 991, 1213
BseLI CCNNNNNNNGG 2 cut(s) 440, 655
BseMI GCAATG 3 cut(s) 1274, 1336, 1492
BseMII CTCAG 5 cut(s) 159, 183, 315, 617, 639
BseNI ACTGG 4 cut(s) 137, 296, 540, 1455
BseRI GAGGAG 3 cut(s) 80, 596, 613
BseXI GCAGC 4 cut(s) 605, 811, 1012, 1291
BseYI CCCAGC 2 cut(s) 408, 976
Bsh1236I CGCG 1 cut(s) 548
BshFI GGCC 2 cut(s) 461, 637
BshTI ACCGGT 1 cut(s) 640
BsiHKAI GWGCWC 1 cut(s) 278
BsiSI CCGG 2 cut(s) 35, 641
BslFI GGGAC 2 cut(s) 202, 631
BslI CCNNNNNNNGG 2 cut(s) 440, 655
BsmAI GTCTC 3 cut(s) 3, 188, 770
BsmFI GGGAC 2 cut(s) 202, 631
BsmI GAATGC 2 cut(s) 1094, 1331
BsnI GGCC 2 cut(s) 461, 637
Bsp1286I GDGCHC 2 cut(s) 278, 1020
Bsp1407I TGTACA 1 cut(s) 1290
Bsp143I GATC 5 cut(s) 297, 332, 497, 808, 1158
Bsp1720I GCTNAGC 1 cut(s) 168
Bsp19I CCATGG 1 cut(s) 1465
BspACI CCGC 5 cut(s) 23, 548, 634, 797, 998
BspANI GGCC 2 cut(s) 461, 637
BspCNI CTCAG 5 cut(s) 160, 184, 314, 616, 638
BspFNI CGCG 1 cut(s) 548
BspHI TCATGA 2 cut(s) 205, 418
BspLI GGNNCC 1 cut(s) 50
BspMAI CTGCAG 1 cut(s) 957
BspMI ACCTGC 1 cut(s) 1446
BspPI GGATC 2 cut(s) 327, 803
BsrDI GCAATG 3 cut(s) 1274, 1336, 1492
BsrFI RCCGGY 2 cut(s) 34, 640
BsrGI TGTACA 1 cut(s) 1290
BsrI ACTGG 4 cut(s) 137, 296, 540, 1455
BssAI RCCGGY 2 cut(s) 34, 640
BssECI CCNNGG 4 cut(s) 376, 462, 463, 1465
BssMI GATC 5 cut(s) 297, 332, 497, 808, 1158
BssNI GRCGYC 2 cut(s) 20, 1068
BssT1I CCWWGG 1 cut(s) 1465
Bst2UI CCWGG 3 cut(s) 377, 435, 464
Bst6I CTCTTC 3 cut(s) 57, 949, 1369
BstACI GRCGYC 2 cut(s) 20, 1068
BstAUI TGTACA 1 cut(s) 1290
BstBAI YACGTR 1 cut(s) 910
BstC8I GCNNGC 2 cut(s) 165, 459
BstDEI CTNAG 5 cut(s) 168, 192, 301, 603, 625
BstDSI CCRYGG 1 cut(s) 1465
BstF5I GGATG 5 cut(s) 132, 357, 916, 991, 1213
BstFNI CGCG 1 cut(s) 548
BstHHI GCGC 1 cut(s) 548
BstKTI GATC 5 cut(s) 300, 335, 500, 811, 1161
BstMAI GTCTC 3 cut(s) 3, 188, 770
BstMBI GATC 5 cut(s) 297, 332, 497, 808, 1158
BstMWI GCNNNNNNNGC 2 cut(s) 31, 169
BstNI CCWGG 3 cut(s) 377, 435, 464
BstSCI CCNGG 3 cut(s) 375, 433, 462
BstSFI CTRYAG 3 cut(s) 43, 953, 1185
BstSNI TACGTA 1 cut(s) 910
BstUI CGCG 1 cut(s) 548
BstV1I GCAGC 4 cut(s) 605, 811, 1012, 1291
BstV2I GAAGAC 2 cut(s) 365, 407
BstX2I RGATCY 1 cut(s) 297
BstYI RGATCY 1 cut(s) 297
BsuI GTATCC 2 cut(s) 281, 1348
BsuRI GGCC 2 cut(s) 461, 637
BtgI CCRYGG 1 cut(s) 1465
BtsCI GGATG 5 cut(s) 132, 357, 916, 991, 1213
BtsI GCAGTG 1 cut(s) 629
BtsIMutI CAGTG 6 cut(s) 36, 629, 1248, 1283, 1448, 1497
BveI ACCTGC 1 cut(s) 1446
Cac8I GCNNGC 2 cut(s) 165, 459
CaiI CAGNNNCTG 2 cut(s) 610, 1285
CciI TCATGA 2 cut(s) 205, 418
CfoI GCGC 1 cut(s) 548
Cfr10I RCCGGY 2 cut(s) 34, 640
Cfr13I GGNCC 2 cut(s) 460, 842
CseI GACGC 2 cut(s) 28, 1076
Csp6I GTAC 5 cut(s) 247, 424, 911, 1291, 1505
CspAI ACCGGT 1 cut(s) 640
CviAII CATG 6 cut(s) 101, 206, 211, 419, 1162, 1466
CviQI GTAC 5 cut(s) 247, 424, 911, 1291, 1505
DdeI CTNAG 5 cut(s) 168, 192, 301, 603, 625
DpnI GATC 5 cut(s) 299, 334, 499, 810, 1160
DpnII GATC 5 cut(s) 297, 332, 497, 808, 1158
EaeI YGGCCR 1 cut(s) 635
Eam1104I CTCTTC 3 cut(s) 57, 949, 1369
EarI CTCTTC 3 cut(s) 57, 949, 1369
Eco105I TACGTA 1 cut(s) 910
Eco130I CCWWGG 1 cut(s) 1465
Eco24I GRGCYC 1 cut(s) 1020
Eco47I GGWCC 1 cut(s) 842
Eco57I CTGAAG 1 cut(s) 1521
EcoRII CCWGG 3 cut(s) 375, 433, 462
EcoT14I CCWWGG 1 cut(s) 1465
EcoT38I GRGCYC 1 cut(s) 1020
ErhI CCWWGG 1 cut(s) 1465
FaeI CATG 6 cut(s) 104, 209, 214, 422, 1165, 1469
FalI AAGNNNNNCTT 2 cut(s) 54, 86
FaqI GGGAC 2 cut(s) 202, 631
FatI CATG 6 cut(s) 100, 205, 210, 418, 1161, 1465
FauI CCCGC 1 cut(s) 541
FblI GTMKAC 1 cut(s) 1461
Fnu4HI GCNGC 6 cut(s) 23, 619, 635, 800, 1001, 1280
FokI GGATG 5 cut(s) 119, 364, 903, 978, 1200
FriOI GRGCYC 1 cut(s) 1020
Fsp4HI GCNGC 6 cut(s) 23, 619, 635, 800, 1001, 1280
FspBI CTAG 2 cut(s) 1202, 1235
GlaI GCGC 1 cut(s) 547
GluI GCNGC 6 cut(s) 23, 619, 635, 800, 1001, 1280
GsaI CCCAGC 2 cut(s) 412, 980
GsuI CTGGAG 1 cut(s) 908
HaeIII GGCC 2 cut(s) 461, 637
HapII CCGG 2 cut(s) 35, 641
HgaI GACGC 2 cut(s) 28, 1076
HhaI GCGC 1 cut(s) 548
Hin1I GRCGYC 2 cut(s) 20, 1068
Hin1II CATG 6 cut(s) 104, 209, 214, 422, 1165, 1469
Hin6I GCGC 1 cut(s) 546
HinP1I GCGC 1 cut(s) 546
HincII GTYRAC 1 cut(s) 1141
HindII GTYRAC 1 cut(s) 1141
HindIII AAGCTT 1 cut(s) 1049
HpaII CCGG 2 cut(s) 35, 641
HphI GGTGA 6 cut(s) 220, 702, 876, 951, 1026, 1097
Hpy166II GTNNAC 5 cut(s) 76, 845, 1141, 1293, 1462
Hpy188I TCNGA 5 cut(s) 118, 453, 502, 559, 1174
Hpy8I GTNNAC 5 cut(s) 76, 845, 1141, 1293, 1462
Hpy99I CGWCG 2 cut(s) 22, 333
HpyAV CCTTC 5 cut(s) 62, 277, 301, 502, 524
HpyCH4IV ACGT 2 cut(s) 909, 1137
HpyF10VI GCNNNNNNNGC 2 cut(s) 31, 169
HpyF3I CTNAG 5 cut(s) 168, 192, 301, 603, 625
HpySE526I ACGT 2 cut(s) 909, 1137
Hsp92I GRCGYC 2 cut(s) 20, 1068
Hsp92II CATG 6 cut(s) 104, 209, 214, 422, 1165, 1469
HspAI GCGC 1 cut(s) 546
Kzo9I GATC 5 cut(s) 297, 332, 497, 808, 1158
LmnI GCTCC 4 cut(s) 67, 273, 310, 626
Lsp1109I GCAGC 4 cut(s) 605, 811, 1012, 1291
LweI GCATC 2 cut(s) 1219, 1297
MaeI CTAG 2 cut(s) 1202, 1235
MaeII ACGT 2 cut(s) 909, 1137
MaeIII GTNAC 5 cut(s) 702, 882, 905, 957, 1032
MalI GATC 5 cut(s) 299, 334, 499, 810, 1160
MboI GATC 5 cut(s) 297, 332, 497, 808, 1158
MflI RGATCY 1 cut(s) 297
MhlI GDGCHC 2 cut(s) 278, 1020
MluCI AATT 8 cut(s) 318, 492, 1096, 1110, 1122, 1168, 1298, 1390
MlyI GAGTC 1 cut(s) 1355
MroXI GAANNNNTTC 2 cut(s) 112, 663
MseI TTAA 2 cut(s) 321, 1113
MspA1I CMGCKG 2 cut(s) 167, 408
MspI CCGG 2 cut(s) 35, 641
MspR9I CCNGG 3 cut(s) 377, 435, 464
Mva1269I GAATGC 2 cut(s) 1094, 1331
MvaI CCWGG 3 cut(s) 377, 435, 464
MvnI CGCG 1 cut(s) 548
MwoI GCNNNNNNNGC 2 cut(s) 31, 169
NcoI CCATGG 1 cut(s) 1465
NdeII GATC 5 cut(s) 297, 332, 497, 808, 1158
NlaIII CATG 6 cut(s) 104, 209, 214, 422, 1165, 1469
NlaIV GGNNCC 1 cut(s) 50
NmuCI GTSAC 3 cut(s) 882, 957, 1032
PagI TCATGA 2 cut(s) 205, 418
PasI CCCWGGG 1 cut(s) 463
PctI GAATGC 2 cut(s) 1094, 1331
PdmI GAANNNNTTC 2 cut(s) 112, 663
PflMI CCANNNNNTGG 1 cut(s) 655
PfoI TCCNGGA 1 cut(s) 433
PinAI ACCGGT 1 cut(s) 640
PkrI GCNGC 6 cut(s) 24, 620, 636, 801, 1002, 1281
PleI GAGTC 1 cut(s) 1355
PpsI GAGTC 1 cut(s) 1355
Ppu21I YACGTR 1 cut(s) 910
PsiI TTATAA 1 cut(s) 243
Psp6I CCWGG 3 cut(s) 375, 433, 462
PspFI CCCAGC 2 cut(s) 408, 976
PspGI CCWGG 3 cut(s) 375, 433, 462
PspN4I GGNNCC 1 cut(s) 50
PspPI GGNCC 2 cut(s) 460, 842
PstI CTGCAG 1 cut(s) 957
PstNI CAGNNNCTG 2 cut(s) 610, 1285
PsuI RGATCY 1 cut(s) 297
PvuII CAGCTG 2 cut(s) 167, 408
RsaI GTAC 5 cut(s) 248, 425, 912, 1292, 1506
RsaNI GTAC 5 cut(s) 247, 424, 911, 1291, 1505
SaqAI TTAA 2 cut(s) 321, 1113
SatI GCNGC 6 cut(s) 23, 619, 635, 800, 1001, 1280
Sau3AI GATC 5 cut(s) 297, 332, 497, 808, 1158
Sau96I GGNCC 2 cut(s) 460, 842
ScaI AGTACT 1 cut(s) 425
SchI GAGTC 1 cut(s) 1355
ScrFI CCNGG 3 cut(s) 377, 435, 464
SduI GDGCHC 2 cut(s) 278, 1020
SfaNI GCATC 2 cut(s) 1219, 1297
SfcI CTRYAG 3 cut(s) 43, 953, 1185
SgrAI CRCCGGYG 1 cut(s) 640
SinI GGWCC 1 cut(s) 842
SnaBI TACGTA 1 cut(s) 910
Sse9I AATT 8 cut(s) 318, 492, 1096, 1110, 1122, 1168, 1298, 1390
SsiI CCGC 5 cut(s) 23, 548, 634, 797, 998
SspI AATATT 2 cut(s) 1321, 1511
SspMI CTAG 2 cut(s) 1202, 1235
StyD4I CCNGG 3 cut(s) 375, 433, 462
StyI CCWWGG 1 cut(s) 1465
TaiI ACGT 2 cut(s) 912, 1140
TaqI TCGA 3 cut(s) 266, 328, 395
TasI AATT 8 cut(s) 318, 492, 1096, 1110, 1122, 1168, 1298, 1390
TatI WGTACW 4 cut(s) 246, 423, 1290, 1504
TauI GCSGC 2 cut(s) 25, 637
Tru1I TTAA 2 cut(s) 321, 1113
Tru9I TTAA 2 cut(s) 321, 1113
TscAI CASTG 6 cut(s) 36, 636, 1248, 1290, 1455, 1504
TseFI GTSAC 3 cut(s) 882, 957, 1032
TseI GCWGC 4 cut(s) 618, 799, 1000, 1279
Tsp45I GTSAC 3 cut(s) 882, 957, 1032
TspDTI ATGAA 9 cut(s) 89, 368, 407, 543, 578, 765, 783, 1335, 1414
TspRI CASTG 6 cut(s) 36, 636, 1248, 1290, 1455, 1504
Van91I CCANNNNNTGG 1 cut(s) 655
VpaK11BI GGWCC 1 cut(s) 842
XapI RAATTY 3 cut(s) 1122, 1298, 1390
XbaI TCTAGA 2 cut(s) 1201, 1234
XcmI CCANNNNNNNNNTGG 1 cut(s) 1472
XmiI GTMKAC 1 cut(s) 1461
XmnI GAANNNNTTC 2 cut(s) 112, 663
XspI CTAG 2 cut(s) 1202, 1235
ZrmI AGTACT 1 cut(s) 425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.