Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000197

Physical Location & Seq

Genomic Coordinates Reverse (-)

53558669 .. 53561560

Gene Structure 2892 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ58656

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1404 bp

ATGGCTGCGTCATCCTCAAGACATCGGGTGGGTTACCGATTCGACCCCAGAGAGCTTCCGGTGGGTTACCGATTCCACCCAACAGAGGAGGAGCTGGTCGATCACTTCCTCAAGAACAAGATGCAAGGCTGCGCCTTCGACGAGGTTCCGGAAGTAGACATCTGCAAGCACGAGCCTTGGGATTTGCCTGCGTTTTCACCGTTAAGGTCGGATGATGAGGAGTGGTTCTACTTCAGTAGACCGGATTACAAGGCCGGCAAGAAACAGGGCCAGGCCAACCGGGCCACCGAGGGAGGGTTTTGGAAGATCACTGCGAAAGAGGGTACTATCAGAGCTCGGAGGTCCAAGGCTGTGATTGGGAAGAAGAGAATTTTGACCTTCTATACTGGGAAAGTTCGGAGTGGGCAGAAGACCAGTTGGGGGATTCATGAGTATTACATACCTGAAAATCTGCTTCCTAATGCTGCTAGGCAGAGGGACTTTGTTCTCTGTCGCTTGAAGAAAAAAGATGAGAGTACTAATATTGGAGCCTGTGATGAAGGTGAACCTAGCACTAACAACGCATCTGATTTTCAGAATCTCATGGAAGTTTTTGGTAGGCAAAGTATTCCAGAGGATTTGCAGATCACATTGCAGGAAAATACTCGGCGGCCTGAAGAAATTTTTGATACACTCTTTCCCTCTCCTGAGTCACCTCAATTACATAATTTCTCCTCCATGTTGGGAGACAATTTTCTGCATGCAAATGCCGTTAGTGATGTTCACCTTGAGTTGCAATATGGATTTCAACCTGATGATTCGGAAGATGAGGAATTCAACGTGAACTCTTATTTGGTTGACGATGGTGATTACTCCTTGGAAGAAACATCACGCACTACTCGGCTCAACCACTCAAGCGAGCCAAAGTCGGTGGTTAAGGTGTATGATGAGGGTATACATCAACAGAGCATGAGTTCACCTGTTGCTTCAAGCCTGCCCATACGAGATGCAAATGTTATGCTTCTTAAGTTCTCGCAGAAGAATGCTTCCCCTGTCAACGTTGCTGCTAACTTACCTCGGAAAGAGCTGCAGGCTGACTTTGGCAGTCATATGCTTTCTCACCTTGGTCCACAGGAAGTCAAGTACACAAGCAAGTTGTCCGAGATGCCTAAGCCTAAGCCGGAGCCTCCAACGCCTAAGCCTAAGCCTGTGGAGCCTCCAAGCAATGATGAAGGAAAGGGTATGAAGCAGAAACAAACTGGAACAACCATCAGCGATTGGAAGAGTTCATTCATTGTCTGGAAGGAATCCCCATTAATCCTTAGATCATATCCTCCAGCAGTATACACTTGTTACATGATAGGAGGCTTGGTTTTGTTCATATTTTTTGTTGAGGAACTAATTTCATATGGGAAGTGGTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016020 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071944 GO:0080090 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

467

Amino Acids

53.17

Weight (kDa)

5.83

Isoelectric Point (pI)

60.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	20 - 146	3.1e-34	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

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Publication-ready

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Orthologous Genes (Group: OG0000197)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g18010 FvH4_7g18010 FvH4_7g18021 FvH4_7g18070 FvH4_7g18070 FvH4_7g18200 FvH4_7g18250
malus_domestica	MD01G1092200.v1.1 MD01G1092500.v1.1 MD01G1092600.v1.1 MD01G1092900.v1.1 MD01G1093000.v1.1 MD01G1093200.v1.1 MD01G1093500.v1.1 MD01G1093700.v1.1 MD01G1093800.v1.1 MD01G1093900.v1.1 MD01G1094000.v1.1 MD01G1094200.v1.1 MD01G1094400.v1.1 MD01G1094500.v1.1 MD01G1094700.v1.1 MD01G1094800.v1.1 MD01G1095100.v1.1 MD07G1162700.v1.1 MD07G1163200.v1.1 MD07G1163400.v1.1 MD07G1163700.v1.1 MD07G1164000.v1.1 MD10G1186100.v1.1
prunus_persica	Prupe.2G201200_v2.0.a1 Prupe.2G201200_v2.0.a1 Prupe.2G201300_v2.0.a1 Prupe.2G201800_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202800_v2.0.a1 Prupe.2G202900_v2.0.a1 Prupe.2G203000_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204900_v2.0.a1
pyrus_communis	pycom01g11610 pycom01g11650 pycom01g11670 pycom01g11680 pycom01g11700 pycom01g11710 pycom01g11720 pycom01g11730 pycom07g15770 pycom07g15860 pycom07g15870 pycom07g15890 pycom07g15900 pycom07g15920
rosa_chinensis	RchiOBHm_Chr1g0333731 RchiOBHm_Chr1g0361411 RchiOBHm_Chr1g0361501 RchiOBHm_Chr1g0361551 RchiOBHm_Chr1g0361631 RchiOBHm_Chr1g0361691 RchiOBHm_Chr1g0361701
rosa_laevigata	RLG00000011640 RLG00000014882 RLG00000027709 RLG00000027713 RLG00000027717 RLG00000027719 RLG00000029532 RLG00000030171 RLG00000030174 RLG00000030177 RLG00000030181 RLG00000030186
rosa_multiflora	Rmu_co8135790.1_g000001 Rmu_co8371689.1_g000001 Rmu_co8391943.1_g000001 Rmu_co8469521.1_g000001 Rmu_co8502503.1_g000002 Rmu_sc0001034.1_g000001 Rmu_sc0002119.1_g000002 Rmu_sc0002119.1_g000009 Rmu_sc0002119.1_g000019 Rmu_sc0003426.1_g000005 Rmu_sc0003693.1_g000010 Rmu_sc0003704.1_g000007 Rmu_sc0006101.1_g000005 Rmu_sc0006417.1_g000006 Rmu_sc0007217.1_g000012 Rmu_sc0010384.1_g000001 Rmu_sc0011258.1_g000003 Rmu_sc0017253.1_g000002 Rmu_ssc0000062.1_g000022
rosa_roxburghii	Rroxscaffold_159G00432930 Rroxscaffold_159G00433040 Rroxscaffold_159G00433060 Rroxscaffold_4G00294780 Rroxscaffold_4G00294810 Rroxscaffold_4G00294870 Rroxscaffold_4G00294930 Rroxscaffold_4G00294950 Rroxscaffold_4G00317240 Rroxscaffold_4G00325190 Rroxscaffold_4G00325210
rosa_rugosa	Rorug01G0047400 Rorug01G0047800 Rorug01G0048100 Rorug01G0048100 Rorug01G0111500 Rorug01G0111500 Rorug01G0289800 Rorug01G0290300 Rorug01G0290700 Rorug01G0290900
rosa_samantha	Rh1AG063000 Rh1AG064000 Rh1AG064400 Rh1AG133700 Rh1AG300300 Rh1AG300900 Rh1AG301000 Rh1AG301100 Rh1BG263800 Rh1BG264000 Rh1BG264100 Rh1CG281800 Rh1CG282100 Rh1CG282200 Rh1DG294000 Rh1DG294100 Rh5BG200600
rosa_wichuraiana	Rw1G005400 Rw1G011170 Rw1G026570 Rw1G026580 Rw1G026610 Rw1G026640 Rw1G026670 Rw1G026700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	4 cut(s)	156, 238, 934, 1323
AccIII	TCCGGA	1 cut(s)	148
AciI	CCGC	1 cut(s)	649
AclI	AACGTT	1 cut(s)	1038
AcsI	RAATTY	3 cut(s)	369, 660, 812
AcuI	CTGAAG	2 cut(s)	217, 675
AfaI	GTAC	4 cut(s)	325, 517, 1124, 1400
AfiI	CCNNNNNNNGG	3 cut(s)	85, 294, 420
AflII	CTTAAG	1 cut(s)	1004
AgsI	TTSAA	4 cut(s)	499, 788, 817, 969
AjnI	CCWGG	1 cut(s)	270
AjuI	GAANNNNNNNTTGG	2 cut(s)	815, 847
AluBI	AGCT	4 cut(s)	55, 94, 335, 1066
AluI	AGCT	4 cut(s)	55, 94, 335, 1066
Alw21I	GWGCWC	1 cut(s)	337
Alw26I	GTCTC	1 cut(s)	720
Aor13HI	TCCGGA	1 cut(s)	148
AoxI	GGCC	5 cut(s)	252, 268, 273, 282, 650
ApeKI	GCWGC	5 cut(s)	5, 129, 464, 1043, 1066
ApoI	RAATTY	3 cut(s)	369, 660, 812
AseI	ATTAAT	1 cut(s)	1295
AspLEI	GCGC	1 cut(s)	134
AspS9I	GGNCC	4 cut(s)	268, 282, 342, 1106
AsuC2I	CCSGG	1 cut(s)	281
AsuHPI	GGTGA	7 cut(s)	189, 554, 684, 755, 857, 948, 1091
AvaII	GGWCC	2 cut(s)	342, 1106
BanII	GRGCYC	1 cut(s)	337
BauI	CACGAG	1 cut(s)	170
BbsI	GAAGAC	1 cut(s)	416
Bbv12I	GWGCWC	1 cut(s)	337
BbvI	GCAGC	4 cut(s)	116, 451, 1030, 1053
BccI	CCATC	2 cut(s)	836, 1256
BceAI	ACGGC	1 cut(s)	734
BciT130I	CCWGG	1 cut(s)	272
BcnI	CCSGG	1 cut(s)	281
BcoDI	GTCTC	1 cut(s)	720
BfaI	CTAG	3 cut(s)	468, 549, 1402
BfmI	CTRYAG	1 cut(s)	1067
BfrI	CTTAAG	1 cut(s)	1004
BglI	GCCNNNNNGGC	1 cut(s)	281
BisI	GCNGC	6 cut(s)	6, 130, 465, 650, 1044, 1067
BlsI	GCNGC	6 cut(s)	7, 131, 466, 651, 1045, 1068
BmcAI	AGTACT	1 cut(s)	517
Bme1390I	CCNGG	2 cut(s)	272, 281
Bme18I	GGWCC	2 cut(s)	342, 1106
BmgT120I	GGNCC	4 cut(s)	268, 282, 342, 1106
BmiI	GGNNCC	4 cut(s)	147, 529, 1164, 1194
BmrFI	CCNGG	2 cut(s)	272, 281
BmrI	ACTGGG	1 cut(s)	396
BmsI	GCATC	4 cut(s)	111, 572, 976, 1134
BmuI	ACTGGG	1 cut(s)	396
BpiI	GAAGAC	1 cut(s)	416
BpmI	CTGGAG	1 cut(s)	1299
Bpu10I	CCTNAGC	4 cut(s)	1149, 1155, 1176, 1182
BpuEI	CTTGAG	3 cut(s)	95, 788, 877
BpuMI	CCSGG	1 cut(s)	281
BsaJI	CCNNGG	6 cut(s)	176, 288, 345, 855, 1055, 1102
BsaWI	WCCGGW	3 cut(s)	58, 148, 241
BsaXI	ACNNNNNCTCC	2 cut(s)	1335, 1365
Bsc4I	CCNNNNNNNGG	3 cut(s)	85, 294, 420
Bse118I	RCCGGY	1 cut(s)	254
Bse1I	ACTGG	3 cut(s)	391, 414, 1243
Bse3DI	GCAATG	2 cut(s)	629, 1210
BseAI	TCCGGA	1 cut(s)	148
BseBI	CCWGG	1 cut(s)	272
BseDI	CCNNGG	6 cut(s)	176, 288, 345, 855, 1055, 1102
BseGI	GGATG	2 cut(s)	11, 217
BseLI	CCNNNNNNNGG	3 cut(s)	85, 294, 420
BseMI	GCAATG	2 cut(s)	629, 1210
BseMII	CTCAG	1 cut(s)	678
BseNI	ACTGG	3 cut(s)	391, 414, 1243
BseRI	GAGGAG	4 cut(s)	101, 104, 233, 703
BseXI	GCAGC	4 cut(s)	116, 451, 1030, 1053
BshFI	GGCC	5 cut(s)	254, 270, 275, 284, 652
BsiHKAI	GWGCWC	1 cut(s)	337
BsiSI	CCGG	6 cut(s)	59, 149, 242, 255, 280, 1160
BslFI	GGGAC	1 cut(s)	491
BslI	CCNNNNNNNGG	3 cut(s)	85, 294, 420
BsmAI	GTCTC	1 cut(s)	720
BsmFI	GGGAC	1 cut(s)	491
BsmI	GAATGC	1 cut(s)	1027
BsnI	GGCC	5 cut(s)	254, 270, 275, 284, 652
Bsp1286I	GDGCHC	1 cut(s)	337
Bsp13I	TCCGGA	1 cut(s)	148
Bsp143I	GATC	4 cut(s)	100, 306, 624, 1304
BspACI	CCGC	1 cut(s)	649
BspANI	GGCC	5 cut(s)	254, 270, 275, 284, 652
BspCNI	CTCAG	1 cut(s)	679
BspEI	TCCGGA	1 cut(s)	148
BspHI	TCATGA	1 cut(s)	427
BspLI	GGNNCC	4 cut(s)	147, 529, 1164, 1194
BspMAI	CTGCAG	1 cut(s)	1071
BspTI	CTTAAG	1 cut(s)	1004
BsrDI	GCAATG	2 cut(s)	629, 1210
BsrFI	RCCGGY	1 cut(s)	254
BsrI	ACTGG	3 cut(s)	391, 414, 1243
BssAI	RCCGGY	1 cut(s)	254
BssECI	CCNNGG	6 cut(s)	176, 288, 345, 855, 1055, 1102
BssMI	GATC	4 cut(s)	100, 306, 624, 1304
BssNAI	GTATAC	2 cut(s)	935, 1324
BssSI	CACGAG	1 cut(s)	170
BssT1I	CCWWGG	4 cut(s)	176, 345, 855, 1102
Bst1107I	GTATAC	2 cut(s)	935, 1324
Bst2BI	CACGAG	1 cut(s)	170
Bst2UI	CCWGG	1 cut(s)	272
Bst4CI	ACNGT	1 cut(s)	201
Bst6I	CTCTTC	2 cut(s)	359, 1256
BstAFI	CTTAAG	1 cut(s)	1004
BstC8I	GCNNGC	7 cut(s)	167, 189, 256, 741, 899, 974, 1071
BstDEI	CTNAG	6 cut(s)	687, 1149, 1155, 1176, 1182, 1301
BstEII	GGTNACC	2 cut(s)	32, 65
BstF5I	GGATG	2 cut(s)	11, 217
BstHHI	GCGC	1 cut(s)	134
BstKTI	GATC	4 cut(s)	103, 309, 627, 1307
BstMAI	GTCTC	1 cut(s)	720
BstMBI	GATC	4 cut(s)	100, 306, 624, 1304
BstMWI	GCNNNNNNNGC	3 cut(s)	281, 1171, 1192
BstNI	CCWGG	1 cut(s)	272
BstNSI	RCATGY	1 cut(s)	743
BstPI	GGTNACC	2 cut(s)	32, 65
BstSCI	CCNGG	2 cut(s)	270, 279
BstSFI	CTRYAG	1 cut(s)	1067
BstV1I	GCAGC	4 cut(s)	116, 451, 1030, 1053
BstV2I	GAAGAC	1 cut(s)	416
BstZ17I	GTATAC	2 cut(s)	935, 1324
BsuRI	GGCC	5 cut(s)	254, 270, 275, 284, 652
BtsCI	GGATG	2 cut(s)	11, 217
BtsI	GCAGTG	1 cut(s)	309
BtsIMutI	CAGTG	1 cut(s)	309
Cac8I	GCNNGC	7 cut(s)	167, 189, 256, 741, 899, 974, 1071
CciI	TCATGA	1 cut(s)	427
CfoI	GCGC	1 cut(s)	134
Cfr10I	RCCGGY	1 cut(s)	254
Cfr13I	GGNCC	4 cut(s)	268, 282, 342, 1106
Csp6I	GTAC	4 cut(s)	324, 516, 1123, 1399
CspCI	CAANNNNNGTGG	2 cut(s)	891, 926
CviAII	CATG	6 cut(s)	428, 583, 718, 740, 949, 1336
CviQI	GTAC	4 cut(s)	324, 516, 1123, 1399
DdeI	CTNAG	6 cut(s)	687, 1149, 1155, 1176, 1182, 1301
DpnI	GATC	4 cut(s)	102, 308, 626, 1306
DpnII	GATC	4 cut(s)	100, 306, 624, 1304
Eam1104I	CTCTTC	2 cut(s)	359, 1256
EarI	CTCTTC	2 cut(s)	359, 1256
Ecl136II	GAGCTC	1 cut(s)	335
Eco130I	CCWWGG	4 cut(s)	176, 345, 855, 1102
Eco24I	GRGCYC	1 cut(s)	337
Eco47I	GGWCC	2 cut(s)	342, 1106
Eco53kI	GAGCTC	1 cut(s)	335
Eco57I	CTGAAG	2 cut(s)	217, 675
Eco91I	GGTNACC	2 cut(s)	32, 65
EcoICRI	GAGCTC	1 cut(s)	335
EcoO65I	GGTNACC	2 cut(s)	32, 65
EcoRI	GAATTC	1 cut(s)	812
EcoRII	CCWGG	1 cut(s)	270
EcoT14I	CCWWGG	4 cut(s)	176, 345, 855, 1102
EcoT38I	GRGCYC	1 cut(s)	337
ErhI	CCWWGG	4 cut(s)	176, 345, 855, 1102
FaeI	CATG	6 cut(s)	431, 586, 721, 743, 952, 1339
FaqI	GGGAC	1 cut(s)	491
FatI	CATG	6 cut(s)	427, 582, 717, 739, 948, 1335
FauNDI	CATATG	2 cut(s)	1089, 1387
FblI	GTMKAC	4 cut(s)	156, 238, 934, 1323
Fnu4HI	GCNGC	6 cut(s)	6, 130, 465, 650, 1044, 1067
FokI	GGATG	1 cut(s)	224
FriOI	GRGCYC	1 cut(s)	337
Fsp4HI	GCNGC	6 cut(s)	6, 130, 465, 650, 1044, 1067
FspBI	CTAG	3 cut(s)	468, 549, 1402
GlaI	GCGC	1 cut(s)	133
GluI	GCNGC	6 cut(s)	6, 130, 465, 650, 1044, 1067
GsuI	CTGGAG	1 cut(s)	1299
HaeIII	GGCC	5 cut(s)	254, 270, 275, 284, 652
HapII	CCGG	6 cut(s)	59, 149, 242, 255, 280, 1160
HhaI	GCGC	1 cut(s)	134
Hin1II	CATG	6 cut(s)	431, 586, 721, 743, 952, 1339
Hin6I	GCGC	1 cut(s)	132
HinP1I	GCGC	1 cut(s)	132
HincII	GTYRAC	2 cut(s)	838, 1036
HindII	GTYRAC	2 cut(s)	838, 1036
HinfI	GANTC	7 cut(s)	39, 72, 424, 577, 689, 797, 1286
HpaII	CCGG	6 cut(s)	59, 149, 242, 255, 280, 1160
HphI	GGTGA	7 cut(s)	189, 554, 684, 755, 857, 948, 1091
Hpy188I	TCNGA	9 cut(s)	211, 332, 339, 399, 568, 576, 802, 1059, 1141
Hpy188III	TCNNGA	7 cut(s)	18, 112, 149, 428, 611, 686, 1279
Hpy99I	CGWCG	1 cut(s)	143
HpyAV	CCTTC	5 cut(s)	145, 388, 533, 1205, 1276
HpyCH4III	ACNGT	1 cut(s)	201
HpyCH4IV	ACGT	2 cut(s)	819, 1038
HpyCH4V	TGCA	9 cut(s)	124, 165, 622, 634, 739, 743, 775, 989, 1069
HpyF10VI	GCNNNNNNNGC	3 cut(s)	281, 1171, 1192
HpyF3I	CTNAG	6 cut(s)	687, 1149, 1155, 1176, 1182, 1301
HpySE526I	ACGT	2 cut(s)	819, 1038
Hsp92II	CATG	6 cut(s)	431, 586, 721, 743, 952, 1339
HspAI	GCGC	1 cut(s)	132
Kpn2I	TCCGGA	1 cut(s)	148
KroI	GCCGGC	1 cut(s)	254
KroNI	GCCGGC	1 cut(s)	256
Kzo9I	GATC	4 cut(s)	100, 306, 624, 1304
LmnI	GCTCC	4 cut(s)	91, 527, 1162, 1192
Lsp1109I	GCAGC	4 cut(s)	116, 451, 1030, 1053
LweI	GCATC	4 cut(s)	111, 572, 976, 1134
MaeI	CTAG	3 cut(s)	468, 549, 1402
MaeII	ACGT	2 cut(s)	819, 1038
MaeIII	GTNAC	4 cut(s)	32, 65, 690, 1331
MalI	GATC	4 cut(s)	102, 308, 626, 1306
MboI	GATC	4 cut(s)	100, 306, 624, 1304
MhlI	GDGCHC	1 cut(s)	337
MluCI	AATT	7 cut(s)	369, 660, 698, 706, 730, 812, 1380
MlyI	GAGTC	1 cut(s)	698
MmeI	TCCRAC	2 cut(s)	189, 1193
MroI	TCCGGA	1 cut(s)	148
MroNI	GCCGGC	1 cut(s)	254
MseI	TTAA	4 cut(s)	203, 915, 1005, 1295
MslI	CAYNNNNRTG	1 cut(s)	744
MspCI	CTTAAG	1 cut(s)	1004
MspI	CCGG	6 cut(s)	59, 149, 242, 255, 280, 1160
MspR9I	CCNGG	2 cut(s)	272, 281
Mva1269I	GAATGC	1 cut(s)	1027
MvaI	CCWGG	1 cut(s)	272
MwoI	GCNNNNNNNGC	3 cut(s)	281, 1171, 1192
NaeI	GCCGGC	1 cut(s)	256
NciI	CCSGG	1 cut(s)	281
NdeI	CATATG	2 cut(s)	1089, 1387
NdeII	GATC	4 cut(s)	100, 306, 624, 1304
NgoMIV	GCCGGC	1 cut(s)	254
NlaIII	CATG	6 cut(s)	431, 586, 721, 743, 952, 1339
NlaIV	GGNNCC	4 cut(s)	147, 529, 1164, 1194
NmeAIII	GCCGAG	2 cut(s)	625, 859
NmuCI	GTSAC	1 cut(s)	690
NspI	RCATGY	1 cut(s)	743
PaeI	GCATGC	1 cut(s)	743
PagI	TCATGA	1 cut(s)	427
PctI	GAATGC	1 cut(s)	1027
PdiI	GCCGGC	1 cut(s)	256
PfeI	GAWTC	6 cut(s)	39, 72, 424, 577, 797, 1286
PkrI	GCNGC	6 cut(s)	7, 131, 466, 651, 1045, 1068
PleI	GAGTC	1 cut(s)	697
PpsI	GAGTC	1 cut(s)	697
PshBI	ATTAAT	1 cut(s)	1295
Psp124BI	GAGCTC	1 cut(s)	337
Psp1406I	AACGTT	1 cut(s)	1038
Psp6I	CCWGG	1 cut(s)	270
PspEI	GGTNACC	2 cut(s)	32, 65
PspGI	CCWGG	1 cut(s)	270
PspN4I	GGNNCC	4 cut(s)	147, 529, 1164, 1194
PspPI	GGNCC	4 cut(s)	268, 282, 342, 1106
PstI	CTGCAG	1 cut(s)	1071
RsaI	GTAC	4 cut(s)	325, 517, 1124, 1400
RsaNI	GTAC	4 cut(s)	324, 516, 1123, 1399
RseI	CAYNNNNRTG	1 cut(s)	744
SacI	GAGCTC	1 cut(s)	337
SaqAI	TTAA	4 cut(s)	203, 915, 1005, 1295
SatI	GCNGC	6 cut(s)	6, 130, 465, 650, 1044, 1067
Sau3AI	GATC	4 cut(s)	100, 306, 624, 1304
Sau96I	GGNCC	4 cut(s)	268, 282, 342, 1106
ScaI	AGTACT	1 cut(s)	517
SchI	GAGTC	1 cut(s)	698
ScrFI	CCNGG	2 cut(s)	272, 281
SduI	GDGCHC	1 cut(s)	337
SfaNI	GCATC	4 cut(s)	111, 572, 976, 1134
SfcI	CTRYAG	1 cut(s)	1067
SfiI	GGCCNNNNNGGCC	1 cut(s)	281
SinI	GGWCC	2 cut(s)	342, 1106
SmiMI	CAYNNNNRTG	1 cut(s)	744
SmlI	CTYRAG	5 cut(s)	16, 110, 767, 892, 1004
SmoI	CTYRAG	5 cut(s)	16, 110, 767, 892, 1004
SphI	GCATGC	1 cut(s)	743
Sse9I	AATT	7 cut(s)	369, 660, 698, 706, 730, 812, 1380
SsiI	CCGC	1 cut(s)	649
SspI	AATATT	1 cut(s)	523
SspMI	CTAG	3 cut(s)	468, 549, 1402
SstI	GAGCTC	1 cut(s)	337
StyD4I	CCNGG	2 cut(s)	270, 279
StyI	CCWWGG	4 cut(s)	176, 345, 855, 1102
TaaI	ACNGT	1 cut(s)	201
TaiI	ACGT	2 cut(s)	822, 1041
TaqI	TCGA	3 cut(s)	42, 99, 138
TasI	AATT	7 cut(s)	369, 660, 698, 706, 730, 812, 1380
TatI	WGTACW	2 cut(s)	515, 1122
TauI	GCSGC	1 cut(s)	652
TfiI	GAWTC	6 cut(s)	39, 72, 424, 577, 797, 1286
Tru1I	TTAA	4 cut(s)	203, 915, 1005, 1295
Tru9I	TTAA	4 cut(s)	203, 915, 1005, 1295
TscAI	CASTG	1 cut(s)	316
TseFI	GTSAC	1 cut(s)	690
TseI	GCWGC	5 cut(s)	5, 129, 464, 1043, 1066
Tsp45I	GTSAC	1 cut(s)	690
TspDTI	ATGAA	8 cut(s)	416, 552, 1224, 1238, 1257, 1261, 1348, 1374
TspRI	CASTG	1 cut(s)	316
Vha464I	CTTAAG	1 cut(s)	1004
VpaK11BI	GGWCC	2 cut(s)	342, 1106
VspI	ATTAAT	1 cut(s)	1295
XapI	RAATTY	3 cut(s)	369, 660, 812
XceI	RCATGY	1 cut(s)	743
XmiI	GTMKAC	4 cut(s)	156, 238, 934, 1323
XspI	CTAG	3 cut(s)	468, 549, 1402
ZrmI	AGTACT	1 cut(s)	517

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.