Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0000197

Physical Location & Seq

Genomic Coordinates Reverse (-)

21019852 .. 21023573

Gene Structure 3722 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1095100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1710 bp

ATGGCTGCCAATAGAAACCGCTTCACCAGAGCAGCAGCAGGTGACCTGTCGATGCCAGTGGGATTCCGGTTCCGCCCTACAGAAGAAGAGCTGATCGACCATTACTTGCTGATGAAGCTCGAGGGTAAGGATTACCTTGTCAGCGACGTCATCCGTGAAATCAATATCTGCAACCACGAGCCAAGGGACTTGCCTGGGTTTTCACTCTTAAAGTCGGATGATCAAGAATGGTACTTCTTCAGCACTTACAAAAAAAACAGCAGAAACCAGACCGAAAGGGCAACGAAGGAAGGCTTCTGGAAGATCACTGGTGCCCAAAAACCGGTCAAGACTCAAGACAATAGAACTATCATCGGTAAAAAAAGGATTCTAACTTTTTACCGAGGTACTGTTCGTAATTCCCAAAGGACCAACTGGGGTATGCATGAGTATTACATCCCCCAAACCAATCCTAATGCTAATCAGAGGGATTTCGTTCTCTGTTGCGTAAAGAAGAAATTGGGTGAGAATGTGGATGCTGCAAACTGGGATGTTGAATCTATTACTTACAACAATGAATCTGATTTCGAAAATCAACTGCTACGAGCACTTGGTATGGATATTGAAGAGGAGCATACTCAGCAACAACAAAGCATGGACTATTTTGAGAGGGAAGAGGGTCGTATGCTTGCAAGTGCCCCTGGTAATAATGATTACCATGGGTTGCAATCTGCATTTGGAGCTGATGAACCGGATGATAAGTTCGCAGAGTTCTTAAATTCAATTATTGTTGATGGGGATCAGGATGAAACAACTCATGCTAACATCTTCAATGACTCCACTCATCCTGATACAACTCATGCTAACATCTTCAACGTCTCCACACATCCTGATACAACTCATGCTAACATCTTCAACGACTCCACTCTGCCACAGTCAATTATGAGCGTGTATTTTGAGGATGAAGCATTAAGCAGTGACGCAGACACAGAAGTACTCCTTGCACAGGAAATGAGTTTACAAATGCTTAGTGAGCCACCAGTTGATTCGAGCCACTCCAGAAGACAGGAAGGTGTCATGCTTTACCAGACACAGGCTGCTTCCTCTGTCAATGTAGTACCTAAACCTCAGACTGATCATCTTCAAGTAGTCACTGATGAACATTCTGTTACACATCGTGGTCAATTAGTTAATGACGAGCATTCTGGTACACATCAAAGAACAAGCAGGCCGCAACGTGAATCAAGACACAATAATGCCTTAAACGTAAAGAATGCTTCCTCTGTGGATGTAGATGCAGAATTACGTCAGCTTAAATGTATTCGATTAGCCCCTGACGAATACTATAACAATGAAAGAACACGTGGAAGAACATATCCAACTAGTGCCCTCGAAGCACTAAGCAAACAGAAAGAATTAAAACAGCAGCAAAGCAAGGCAAAAGAAGCTGCAGAGCTTCGAGCTGCTGTTGATTTTCCTCCGAAGTTGACATCTATAACAAAGTCTAACAAAGAAGCAGAGGTGGCTCAAGGTAATAATGCAGAAAAGGGTGTGAAGCAGACACAGAACACAACAACCACTTGCAATTGGAAGGGCTGTTCTTTCATTTCATGGGAGACATCCCCCCCATTAACAAGTCCCCCATCAGAATACTTTTTCAACATGGTTCTAGGCATAATAATGTTCTGCTTTTTTGCTTGGCTAGTAGTTTTATACGGGCAGTGGTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016020 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071944 GO:0080090 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

570

Amino Acids

64.83

Weight (kDa)

5.37

Isoelectric Point (pI)

41.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	19 - 145	5.2e-36	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000197)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g18010 FvH4_7g18010 FvH4_7g18021 FvH4_7g18070 FvH4_7g18070 FvH4_7g18200 FvH4_7g18250
malus_domestica	MD01G1092200.v1.1 MD01G1092500.v1.1 MD01G1092600.v1.1 MD01G1092900.v1.1 MD01G1093000.v1.1 MD01G1093200.v1.1 MD01G1093500.v1.1 MD01G1093700.v1.1 MD01G1093800.v1.1 MD01G1093900.v1.1 MD01G1094000.v1.1 MD01G1094200.v1.1 MD01G1094400.v1.1 MD01G1094500.v1.1 MD01G1094700.v1.1 MD01G1094800.v1.1 MD01G1095100.v1.1 MD07G1162700.v1.1 MD07G1163200.v1.1 MD07G1163400.v1.1 MD07G1163700.v1.1 MD07G1164000.v1.1 MD10G1186100.v1.1
prunus_persica	Prupe.2G201200_v2.0.a1 Prupe.2G201200_v2.0.a1 Prupe.2G201300_v2.0.a1 Prupe.2G201800_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202800_v2.0.a1 Prupe.2G202900_v2.0.a1 Prupe.2G203000_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204900_v2.0.a1
pyrus_communis	pycom01g11610 pycom01g11650 pycom01g11670 pycom01g11680 pycom01g11700 pycom01g11710 pycom01g11720 pycom01g11730 pycom07g15770 pycom07g15860 pycom07g15870 pycom07g15890 pycom07g15900 pycom07g15920
rosa_chinensis	RchiOBHm_Chr1g0333731 RchiOBHm_Chr1g0361411 RchiOBHm_Chr1g0361501 RchiOBHm_Chr1g0361551 RchiOBHm_Chr1g0361631 RchiOBHm_Chr1g0361691 RchiOBHm_Chr1g0361701
rosa_laevigata	RLG00000011640 RLG00000014882 RLG00000027709 RLG00000027713 RLG00000027717 RLG00000027719 RLG00000029532 RLG00000030171 RLG00000030174 RLG00000030177 RLG00000030181 RLG00000030186
rosa_multiflora	Rmu_co8135790.1_g000001 Rmu_co8371689.1_g000001 Rmu_co8391943.1_g000001 Rmu_co8469521.1_g000001 Rmu_co8502503.1_g000002 Rmu_sc0001034.1_g000001 Rmu_sc0002119.1_g000002 Rmu_sc0002119.1_g000009 Rmu_sc0002119.1_g000019 Rmu_sc0003426.1_g000005 Rmu_sc0003693.1_g000010 Rmu_sc0003704.1_g000007 Rmu_sc0006101.1_g000005 Rmu_sc0006417.1_g000006 Rmu_sc0007217.1_g000012 Rmu_sc0010384.1_g000001 Rmu_sc0011258.1_g000003 Rmu_sc0017253.1_g000002 Rmu_ssc0000062.1_g000022
rosa_roxburghii	Rroxscaffold_159G00432930 Rroxscaffold_159G00433040 Rroxscaffold_159G00433060 Rroxscaffold_4G00294780 Rroxscaffold_4G00294810 Rroxscaffold_4G00294870 Rroxscaffold_4G00294930 Rroxscaffold_4G00294950 Rroxscaffold_4G00317240 Rroxscaffold_4G00325190 Rroxscaffold_4G00325210
rosa_rugosa	Rorug01G0047400 Rorug01G0047800 Rorug01G0048100 Rorug01G0048100 Rorug01G0111500 Rorug01G0111500 Rorug01G0289800 Rorug01G0290300 Rorug01G0290700 Rorug01G0290900
rosa_samantha	Rh1AG063000 Rh1AG064000 Rh1AG064400 Rh1AG133700 Rh1AG300300 Rh1AG300900 Rh1AG301000 Rh1AG301100 Rh1BG263800 Rh1BG264000 Rh1BG264100 Rh1CG281800 Rh1CG282100 Rh1CG282200 Rh1DG294000 Rh1DG294100 Rh5BG200600
rosa_wichuraiana	Rw1G005400 Rw1G011170 Rw1G026570 Rw1G026580 Rw1G026610 Rw1G026640 Rw1G026670 Rw1G026700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	29
AatII	GACGTC	1 cut(s)	150
Acc36I	ACCTGC	1 cut(s)	29
AccB1I	GGYRCC	1 cut(s)	311
AciI	CCGC	3 cut(s)	19, 73, 1211
AclWI	GGATC	1 cut(s)	786
AcsI	RAATTY	1 cut(s)	757
AcuI	CTGAAG	1 cut(s)	223
AcvI	CACGTG	1 cut(s)	1343
AcyI	GRCGYC	1 cut(s)	147
AdeI	CACNNNGTG	1 cut(s)	1157
AfaI	GTAC	5 cut(s)	233, 388, 975, 1098, 1189
AfiI	CCNNNNNNNGG	3 cut(s)	322, 985, 1072
AflIII	ACRYGT	1 cut(s)	1340
AgeI	ACCGGT	1 cut(s)	322
AgsI	TTSAA	8 cut(s)	536, 605, 762, 811, 853, 895, 1124, 1639
AhlI	ACTAGT	1 cut(s)	1361
AjnI	CCWGG	2 cut(s)	193, 679
AloI	GAACNNNNNNTCC	4 cut(s)	725, 757, 1561, 1593
AluBI	AGCT	7 cut(s)	91, 118, 722, 1291, 1427, 1435, 1442
AluI	AGCT	7 cut(s)	91, 118, 722, 1291, 1427, 1435, 1442
Alw21I	GWGCWC	1 cut(s)	589
Alw26I	GTCTC	2 cut(s)	862, 1589
AlwI	GGATC	1 cut(s)	786
Ama87I	CYCGRG	1 cut(s)	119
AoxI	GGCC	1 cut(s)	1208
ApeKI	GCWGC	8 cut(s)	5, 32, 35, 518, 1076, 1405, 1427, 1442
ApoI	RAATTY	1 cut(s)	757
AsiGI	ACCGGT	1 cut(s)	322
AspS9I	GGNCC	1 cut(s)	408
AsuHPI	GGTGA	3 cut(s)	16, 53, 515
AsuII	TTCGAA	1 cut(s)	567
AvaI	CYCGRG	1 cut(s)	119
AvaII	GGWCC	1 cut(s)	408
BaeGI	GKGCMC	3 cut(s)	316, 679, 1369
BanI	GGYRCC	1 cut(s)	311
BauI	CACGAG	1 cut(s)	176
BbrPI	CACGTG	1 cut(s)	1343
BbsI	GAAGAC	1 cut(s)	1048
Bbv12I	GWGCWC	1 cut(s)	589
BbvI	GCAGC	7 cut(s)	44, 47, 505, 1063, 1414, 1417, 1429
BccI	CCATC	2 cut(s)	767, 1630
BciT130I	CCWGG	2 cut(s)	195, 681
BclI	TGATCA	2 cut(s)	220, 1114
BcoDI	GTCTC	2 cut(s)	862, 1589
BcuI	ACTAGT	1 cut(s)	1361
BfaI	CTAG	4 cut(s)	1362, 1649, 1682, 1708
BfmI	CTRYAG	2 cut(s)	78, 1428
BfuAI	ACCTGC	1 cut(s)	29
BisI	GCNGC	9 cut(s)	6, 33, 36, 519, 1077, 1211, 1406, 1428, 1443
BlsI	GCNGC	9 cut(s)	7, 34, 37, 520, 1078, 1212, 1407, 1429, 1444
BmcAI	AGTACT	1 cut(s)	975
Bme1390I	CCNGG	2 cut(s)	195, 681
Bme18I	GGWCC	1 cut(s)	408
BmeT110I	CYCGRG	1 cut(s)	119
BmgT120I	GGNCC	1 cut(s)	408
BmiI	GGNNCC	2 cut(s)	71, 313
BmrFI	CCNGG	2 cut(s)	195, 681
BmrI	ACTGGG	2 cut(s)	424, 535
BmsI	GCATC	3 cut(s)	42, 505, 1264
BmuI	ACTGGG	2 cut(s)	424, 535
BpiI	GAAGAC	1 cut(s)	1048
BpmI	CTGGAG	1 cut(s)	1021
Bpu14I	TTCGAA	1 cut(s)	567
BpuEI	CTTGAG	2 cut(s)	318, 1491
BsaAI	YACGTR	1 cut(s)	1343
BsaBI	GATNNNNATC	1 cut(s)	777
BsaHI	GRCGYC	1 cut(s)	147
BsaJI	CCNNGG	5 cut(s)	182, 194, 382, 679, 697
BsaWI	WCCGGW	3 cut(s)	66, 322, 730
Bsc4I	CCNNNNNNNGG	3 cut(s)	322, 985, 1072
Bse118I	RCCGGY	1 cut(s)	322
Bse1I	ACTGG	5 cut(s)	56, 313, 419, 530, 1019
Bse8I	GATNNNNATC	1 cut(s)	777
BseBI	CCWGG	2 cut(s)	195, 681
BseDI	CCNNGG	5 cut(s)	182, 194, 382, 679, 697
BseJI	GATNNNNATC	1 cut(s)	777
BseLI	CCNNNNNNNGG	3 cut(s)	322, 985, 1072
BseMII	CTCAG	2 cut(s)	632, 1121
BseNI	ACTGG	5 cut(s)	56, 313, 419, 530, 1019
BseRI	GAGGAG	1 cut(s)	623
BseSI	GKGCMC	3 cut(s)	316, 679, 1369
BseXI	GCAGC	7 cut(s)	44, 47, 505, 1063, 1414, 1417, 1429
BshFI	GGCC	1 cut(s)	1210
BshNI	GGYRCC	1 cut(s)	311
BshTI	ACCGGT	1 cut(s)	322
BsiHKAI	GWGCWC	1 cut(s)	589
BsiHKCI	CYCGRG	1 cut(s)	119
BsiSI	CCGG	3 cut(s)	67, 323, 731
BslFI	GGGAC	2 cut(s)	200, 1602
BslI	CCNNNNNNNGG	3 cut(s)	322, 985, 1072
BsmAI	GTCTC	2 cut(s)	862, 1589
BsmBI	CGTCTC	1 cut(s)	862
BsmFI	GGGAC	2 cut(s)	200, 1602
BsmI	GAATGC	2 cut(s)	1180, 1258
BsnI	GGCC	1 cut(s)	1210
BsoBI	CYCGRG	1 cut(s)	119
Bsp119I	TTCGAA	1 cut(s)	567
Bsp1286I	GDGCHC	4 cut(s)	316, 589, 679, 1369
Bsp143I	GATC	5 cut(s)	93, 220, 303, 778, 1114
Bsp19I	CCATGG	1 cut(s)	697
BspACI	CCGC	3 cut(s)	19, 73, 1211
BspANI	GGCC	1 cut(s)	1210
BspCNI	CTCAG	2 cut(s)	631, 1120
BspLI	GGNNCC	2 cut(s)	71, 313
BspMAI	CTGCAG	1 cut(s)	1432
BspMI	ACCTGC	1 cut(s)	29
BspPI	GGATC	1 cut(s)	786
BspQI	GCTCTTC	1 cut(s)	81
BspT104I	TTCGAA	1 cut(s)	567
BspT107I	GGYRCC	1 cut(s)	311
BsrFI	RCCGGY	1 cut(s)	322
BsrI	ACTGG	5 cut(s)	56, 313, 419, 530, 1019
BssAI	RCCGGY	1 cut(s)	322
BssECI	CCNNGG	5 cut(s)	182, 194, 382, 679, 697
BssMI	GATC	5 cut(s)	93, 220, 303, 778, 1114
BssNI	GRCGYC	1 cut(s)	147
BssSI	CACGAG	1 cut(s)	176
BssT1I	CCWWGG	2 cut(s)	182, 697
Bst2BI	CACGAG	1 cut(s)	176
Bst2UI	CCWGG	2 cut(s)	195, 681
Bst4CI	ACNGT	2 cut(s)	391, 915
Bst6I	CTCTTC	3 cut(s)	81, 600, 648
BstACI	GRCGYC	1 cut(s)	147
BstBAI	YACGTR	1 cut(s)	1343
BstBI	TTCGAA	1 cut(s)	567
BstC8I	GCNNGC	2 cut(s)	669, 1208
BstDEI	CTNAG	4 cut(s)	618, 1007, 1107, 1379
BstDSI	CCRYGG	1 cut(s)	697
BstEII	GGTNACC	1 cut(s)	41
BstENI	CCTNNNNNAGG	1 cut(s)	983
BstKTI	GATC	5 cut(s)	96, 223, 306, 781, 1117
BstMAI	GTCTC	2 cut(s)	862, 1589
BstMBI	GATC	5 cut(s)	93, 220, 303, 778, 1114
BstMWI	GCNNNNNNNGC	7 cut(s)	115, 619, 719, 1012, 1373, 1424, 1502
BstNI	CCWGG	2 cut(s)	195, 681
BstPI	GGTNACC	1 cut(s)	41
BstSCI	CCNGG	2 cut(s)	193, 679
BstSFI	CTRYAG	2 cut(s)	78, 1428
BstSLI	GKGCMC	3 cut(s)	316, 679, 1369
BstV1I	GCAGC	7 cut(s)	44, 47, 505, 1063, 1414, 1417, 1429
BstV2I	GAAGAC	1 cut(s)	1048
BsuRI	GGCC	1 cut(s)	1210
BtgI	CCRYGG	1 cut(s)	697
BtsI	GCAGTG	2 cut(s)	961, 1706
BtsIMutI	CAGTG	5 cut(s)	63, 306, 961, 1131, 1706
BveI	ACCTGC	1 cut(s)	29
Cac8I	GCNNGC	2 cut(s)	669, 1208
Cfr10I	RCCGGY	1 cut(s)	322
Cfr13I	GGNCC	1 cut(s)	408
CseI	GACGC	1 cut(s)	968
Csp6I	GTAC	5 cut(s)	232, 387, 974, 1097, 1188
CspAI	ACCGGT	1 cut(s)	322
CviAII	CATG	9 cut(s)	425, 634, 698, 797, 839, 881, 1057, 1590, 1642
CviQI	GTAC	5 cut(s)	232, 387, 974, 1097, 1188
DdeI	CTNAG	4 cut(s)	618, 1007, 1107, 1379
DpnI	GATC	5 cut(s)	95, 222, 305, 780, 1116
DpnII	GATC	5 cut(s)	93, 220, 303, 778, 1114
DraIII	CACNNNGTG	1 cut(s)	1157
Eam1104I	CTCTTC	3 cut(s)	81, 600, 648
EarI	CTCTTC	3 cut(s)	81, 600, 648
EciI	GGCGGA	1 cut(s)	62
Eco130I	CCWWGG	2 cut(s)	182, 697
Eco47I	GGWCC	1 cut(s)	408
Eco57I	CTGAAG	1 cut(s)	223
Eco72I	CACGTG	1 cut(s)	1343
Eco88I	CYCGRG	1 cut(s)	119
Eco91I	GGTNACC	1 cut(s)	41
EcoNI	CCTNNNNNAGG	1 cut(s)	983
EcoO65I	GGTNACC	1 cut(s)	41
EcoRII	CCWGG	2 cut(s)	193, 679
EcoT14I	CCWWGG	2 cut(s)	182, 697
EcoT22I	ATGCAT	1 cut(s)	426
ErhI	CCWWGG	2 cut(s)	182, 697
Esp3I	CGTCTC	1 cut(s)	862
FaeI	CATG	9 cut(s)	428, 637, 701, 800, 842, 884, 1060, 1593, 1645
FalI	AAGNNNNNCTT	4 cut(s)	278, 310, 963, 995
FaqI	GGGAC	2 cut(s)	200, 1602
FatI	CATG	9 cut(s)	424, 633, 697, 796, 838, 880, 1056, 1589, 1641
FbaI	TGATCA	2 cut(s)	220, 1114
Fnu4HI	GCNGC	9 cut(s)	6, 33, 36, 519, 1077, 1211, 1406, 1428, 1443
Fsp4HI	GCNGC	9 cut(s)	6, 33, 36, 519, 1077, 1211, 1406, 1428, 1443
FspBI	CTAG	4 cut(s)	1362, 1649, 1682, 1708
GluI	GCNGC	9 cut(s)	6, 33, 36, 519, 1077, 1211, 1406, 1428, 1443
GsuI	CTGGAG	1 cut(s)	1021
HaeIII	GGCC	1 cut(s)	1210
HapII	CCGG	3 cut(s)	67, 323, 731
HgaI	GACGC	1 cut(s)	968
Hin1I	GRCGYC	1 cut(s)	147
Hin1II	CATG	9 cut(s)	428, 637, 701, 800, 842, 884, 1060, 1593, 1645
HincII	GTYRAC	1 cut(s)	1467
HindII	GTYRAC	1 cut(s)	1467
HinfI	GANTC	9 cut(s)	63, 331, 367, 536, 557, 815, 899, 1025, 1220
HpaII	CCGG	3 cut(s)	67, 323, 731
HphI	GGTGA	3 cut(s)	16, 53, 515
Hpy166II	GTNNAC	3 cut(s)	998, 1190, 1467
Hpy188I	TCNGA	6 cut(s)	217, 465, 562, 1110, 1461, 1627
Hpy188III	TCNNGA	9 cut(s)	224, 298, 328, 335, 782, 827, 869, 1038, 1224
Hpy8I	GTNNAC	3 cut(s)	998, 1190, 1467
Hpy99I	CGWCG	1 cut(s)	149
HpyAV	CCTTC	4 cut(s)	280, 284, 1043, 1564
HpyCH4III	ACNGT	2 cut(s)	391, 915
HpyCH4IV	ACGT	6 cut(s)	147, 855, 1216, 1245, 1285, 1342
HpyF10VI	GCNNNNNNNGC	7 cut(s)	115, 619, 719, 1012, 1373, 1424, 1502
HpyF3I	CTNAG	4 cut(s)	618, 1007, 1107, 1379
HpySE526I	ACGT	6 cut(s)	147, 855, 1216, 1245, 1285, 1342
Hsp92I	GRCGYC	1 cut(s)	147
Hsp92II	CATG	9 cut(s)	428, 637, 701, 800, 842, 884, 1060, 1593, 1645
Ksp22I	TGATCA	2 cut(s)	220, 1114
Kzo9I	GATC	5 cut(s)	93, 220, 303, 778, 1114
LguI	GCTCTTC	1 cut(s)	81
LmnI	GCTCC	2 cut(s)	610, 719
Lsp1109I	GCAGC	7 cut(s)	44, 47, 505, 1063, 1414, 1417, 1429
LweI	GCATC	3 cut(s)	42, 505, 1264
MaeI	CTAG	4 cut(s)	1362, 1649, 1682, 1708
MaeII	ACGT	6 cut(s)	147, 855, 1216, 1245, 1285, 1342
MaeIII	GTNAC	4 cut(s)	41, 956, 1129, 1147
MalI	GATC	5 cut(s)	95, 222, 305, 780, 1116
MboI	GATC	5 cut(s)	93, 220, 303, 778, 1114
MfeI	CAATTG	1 cut(s)	1564
MhlI	GDGCHC	4 cut(s)	316, 589, 679, 1369
MluCI	AATT	9 cut(s)	397, 497, 757, 762, 918, 1163, 1280, 1394, 1564
MlyI	GAGTC	3 cut(s)	325, 809, 893
MmeI	TCCRAC	2 cut(s)	195, 1382
Mph1103I	ATGCAT	1 cut(s)	426
MseI	TTAA	8 cut(s)	209, 755, 950, 1170, 1241, 1293, 1397, 1610
MslI	CAYNNNNRTG	2 cut(s)	1233, 1658
MspI	CCGG	3 cut(s)	67, 323, 731
MspR9I	CCNGG	2 cut(s)	195, 681
MunI	CAATTG	1 cut(s)	1564
Mva1269I	GAATGC	2 cut(s)	1180, 1258
MvaI	CCWGG	2 cut(s)	195, 681
MwoI	GCNNNNNNNGC	7 cut(s)	115, 619, 719, 1012, 1373, 1424, 1502
NcoI	CCATGG	1 cut(s)	697
NdeII	GATC	5 cut(s)	93, 220, 303, 778, 1114
NlaIII	CATG	9 cut(s)	428, 637, 701, 800, 842, 884, 1060, 1593, 1645
NlaIV	GGNNCC	2 cut(s)	71, 313
NmuCI	GTSAC	3 cut(s)	41, 956, 1129
NsiI	ATGCAT	1 cut(s)	426
NspV	TTCGAA	1 cut(s)	567
PaeR7I	CTCGAG	1 cut(s)	119
PaqCI	CACCTGC	1 cut(s)	29
PciSI	GCTCTTC	1 cut(s)	81
PctI	GAATGC	2 cut(s)	1180, 1258
PfeI	GAWTC	6 cut(s)	63, 367, 536, 557, 1025, 1220
PinAI	ACCGGT	1 cut(s)	322
PkrI	GCNGC	9 cut(s)	7, 34, 37, 520, 1078, 1212, 1407, 1429, 1444
PleI	GAGTC	3 cut(s)	325, 809, 893
PmaCI	CACGTG	1 cut(s)	1343
PmlI	CACGTG	1 cut(s)	1343
PpsI	GAGTC	3 cut(s)	325, 809, 893
Ppu21I	YACGTR	1 cut(s)	1343
Psp6I	CCWGG	2 cut(s)	193, 679
PspCI	CACGTG	1 cut(s)	1343
PspEI	GGTNACC	1 cut(s)	41
PspGI	CCWGG	2 cut(s)	193, 679
PspN4I	GGNNCC	2 cut(s)	71, 313
PspPI	GGNCC	1 cut(s)	408
PspXI	VCTCGAGB	1 cut(s)	119
PstI	CTGCAG	1 cut(s)	1432
RsaI	GTAC	5 cut(s)	233, 388, 975, 1098, 1189
RsaNI	GTAC	5 cut(s)	232, 387, 974, 1097, 1188
RseI	CAYNNNNRTG	2 cut(s)	1233, 1658
SapI	GCTCTTC	1 cut(s)	81
SaqAI	TTAA	8 cut(s)	209, 755, 950, 1170, 1241, 1293, 1397, 1610
SatI	GCNGC	9 cut(s)	6, 33, 36, 519, 1077, 1211, 1406, 1428, 1443
Sau3AI	GATC	5 cut(s)	93, 220, 303, 778, 1114
Sau96I	GGNCC	1 cut(s)	408
ScaI	AGTACT	1 cut(s)	975
SchI	GAGTC	3 cut(s)	325, 809, 893
ScrFI	CCNGG	2 cut(s)	195, 681
SduI	GDGCHC	4 cut(s)	316, 589, 679, 1369
SfaNI	GCATC	3 cut(s)	42, 505, 1264
SfcI	CTRYAG	2 cut(s)	78, 1428
Sfr274I	CTCGAG	1 cut(s)	119
SfuI	TTCGAA	1 cut(s)	567
SinI	GGWCC	1 cut(s)	408
SlaI	CTCGAG	1 cut(s)	119
SmiMI	CAYNNNNRTG	2 cut(s)	1233, 1658
SmlI	CTYRAG	3 cut(s)	119, 333, 1506
SmoI	CTYRAG	3 cut(s)	119, 333, 1506
SpeI	ACTAGT	1 cut(s)	1361
Sse9I	AATT	9 cut(s)	397, 497, 757, 762, 918, 1163, 1280, 1394, 1564
SsiI	CCGC	3 cut(s)	19, 73, 1211
SspMI	CTAG	4 cut(s)	1362, 1649, 1682, 1708
StyD4I	CCNGG	2 cut(s)	193, 679
StyI	CCWWGG	2 cut(s)	182, 697
TaaI	ACNGT	2 cut(s)	391, 915
TaiI	ACGT	6 cut(s)	150, 858, 1219, 1248, 1288, 1345
TaqI	TCGA	8 cut(s)	50, 96, 120, 567, 1028, 1303, 1371, 1438
TaqII	GACCGA	1 cut(s)	287
TasI	AATT	9 cut(s)	397, 497, 757, 762, 918, 1163, 1280, 1394, 1564
TatI	WGTACW	1 cut(s)	973
TauI	GCSGC	1 cut(s)	1213
TfiI	GAWTC	6 cut(s)	63, 367, 536, 557, 1025, 1220
Tru1I	TTAA	8 cut(s)	209, 755, 950, 1170, 1241, 1293, 1397, 1610
Tru9I	TTAA	8 cut(s)	209, 755, 950, 1170, 1241, 1293, 1397, 1610
TscAI	CASTG	5 cut(s)	63, 313, 961, 1138, 1706
TseFI	GTSAC	3 cut(s)	41, 956, 1129
TseI	GCWGC	8 cut(s)	5, 32, 35, 518, 1076, 1405, 1427, 1442
Tsp45I	GTSAC	3 cut(s)	41, 956, 1129
TspDTI	ATGAA	9 cut(s)	128, 570, 741, 801, 957, 1152, 1347, 1573, 1578
TspGWI	ACGGA	1 cut(s)	143
TspRI	CASTG	5 cut(s)	63, 313, 961, 1138, 1706
VpaK11BI	GGWCC	1 cut(s)	408
XagI	CCTNNNNNAGG	1 cut(s)	983
XapI	RAATTY	1 cut(s)	757
XhoI	CTCGAG	1 cut(s)	119
XspI	CTAG	4 cut(s)	1362, 1649, 1682, 1708
ZraI	GACGTC	1 cut(s)	148
ZrmI	AGTACT	1 cut(s)	975
Zsp2I	ATGCAT	1 cut(s)	426

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.