Rmu_co8391943.1_g000001
NAC Family

NAC domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8391943.1
Physical Location & Seq
Forward (+)
904 .. 1212
309 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8391943.1_g000001.1.cds

Sequence Viewer

Length: 309 bp
atgttggggactgatacaggggctcaggacaaggagtggttcttcttcaccagaatgtattacaagtacaacaaaagctctcgctcaaatcggagcgcgaagaagggatactggaaaatcacaggcaaggagcgtgggattaaggctcgacgatccaaagctgtgattgggagcaagaggacattgactttttaccaggatcgtgtgccgaaatcgaacaagaccagctgggtcattcttgagtactatcttcctggaaatggagttatttcgtatctgaagcgattagacatatctcgtctattttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

102

Amino Acids

12.05

Weight (kDa)

10.37

Isoelectric Point (pI)

45.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000197)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18010 FvH4_7g18010 FvH4_7g18021 FvH4_7g18070 FvH4_7g18070 FvH4_7g18200 FvH4_7g18250
malus_domestica MD01G1092200.v1.1 MD01G1092500.v1.1 MD01G1092600.v1.1 MD01G1092900.v1.1 MD01G1093000.v1.1 MD01G1093200.v1.1 MD01G1093500.v1.1 MD01G1093700.v1.1 MD01G1093800.v1.1 MD01G1093900.v1.1 MD01G1094000.v1.1 MD01G1094200.v1.1 MD01G1094400.v1.1 MD01G1094500.v1.1 MD01G1094700.v1.1 MD01G1094800.v1.1 MD01G1095100.v1.1 MD07G1162700.v1.1 MD07G1163200.v1.1 MD07G1163400.v1.1 MD07G1163700.v1.1 MD07G1164000.v1.1 MD10G1186100.v1.1
prunus_persica Prupe.2G201200_v2.0.a1 Prupe.2G201200_v2.0.a1 Prupe.2G201300_v2.0.a1 Prupe.2G201800_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202800_v2.0.a1 Prupe.2G202900_v2.0.a1 Prupe.2G203000_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204900_v2.0.a1
pyrus_communis pycom01g11610 pycom01g11650 pycom01g11670 pycom01g11680 pycom01g11700 pycom01g11710 pycom01g11720 pycom01g11730 pycom07g15770 pycom07g15860 pycom07g15870 pycom07g15890 pycom07g15900 pycom07g15920
rosa_chinensis RchiOBHm_Chr1g0333731 RchiOBHm_Chr1g0361411 RchiOBHm_Chr1g0361501 RchiOBHm_Chr1g0361551 RchiOBHm_Chr1g0361631 RchiOBHm_Chr1g0361691 RchiOBHm_Chr1g0361701
rosa_laevigata RLG00000011640 RLG00000014882 RLG00000027709 RLG00000027713 RLG00000027717 RLG00000027719 RLG00000029532 RLG00000030171 RLG00000030174 RLG00000030177 RLG00000030181 RLG00000030186
rosa_multiflora Rmu_co8135790.1_g000001 Rmu_co8371689.1_g000001 Rmu_co8391943.1_g000001 Rmu_co8469521.1_g000001 Rmu_co8502503.1_g000002 Rmu_sc0001034.1_g000001 Rmu_sc0002119.1_g000002 Rmu_sc0002119.1_g000009 Rmu_sc0002119.1_g000019 Rmu_sc0003426.1_g000005 Rmu_sc0003693.1_g000010 Rmu_sc0003704.1_g000007 Rmu_sc0006101.1_g000005 Rmu_sc0006417.1_g000006 Rmu_sc0007217.1_g000012 Rmu_sc0010384.1_g000001 Rmu_sc0011258.1_g000003 Rmu_sc0017253.1_g000002 Rmu_ssc0000062.1_g000022
rosa_roxburghii Rroxscaffold_159G00432930 Rroxscaffold_159G00433040 Rroxscaffold_159G00433060 Rroxscaffold_4G00294780 Rroxscaffold_4G00294810 Rroxscaffold_4G00294870 Rroxscaffold_4G00294930 Rroxscaffold_4G00294950 Rroxscaffold_4G00317240 Rroxscaffold_4G00325190 Rroxscaffold_4G00325210
rosa_rugosa Rorug01G0047400 Rorug01G0047800 Rorug01G0048100 Rorug01G0048100 Rorug01G0111500 Rorug01G0111500 Rorug01G0289800 Rorug01G0290300 Rorug01G0290700 Rorug01G0290900
rosa_samantha Rh1AG063000 Rh1AG064000 Rh1AG064400 Rh1AG133700 Rh1AG300300 Rh1AG300900 Rh1AG301000 Rh1AG301100 Rh1BG263800 Rh1BG264000 Rh1BG264100 Rh1CG281800 Rh1CG282100 Rh1CG282200 Rh1DG294000 Rh1DG294100 Rh5BG200600
rosa_wichuraiana Rw1G005400 Rw1G011170 Rw1G026570 Rw1G026580 Rw1G026610 Rw1G026640 Rw1G026670 Rw1G026700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 98
AclWI GGATC 2 cut(s) 147, 207
AcuI CTGAAG 1 cut(s) 299
AfaI GTAC 2 cut(s) 68, 245
AfiI CCNNNNNNNGG 1 cut(s) 260
AjnI CCWGG 2 cut(s) 195, 253
AluBI AGCT 3 cut(s) 78, 161, 228
AluI AGCT 3 cut(s) 78, 161, 228
AlwI GGATC 2 cut(s) 147, 207
AspLEI GCGC 1 cut(s) 98
AsuHPI GGTGA 1 cut(s) 40
BanII GRGCYC 1 cut(s) 25
BarI GAAGNNNNNNTAC 2 cut(s) 92, 124
BciT130I CCWGG 2 cut(s) 197, 255
BciVI GTATCC 1 cut(s) 101
BfuI GTATCC 1 cut(s) 101
BmcAI AGTACT 1 cut(s) 245
Bme1390I CCNGG 2 cut(s) 197, 255
BmrFI CCNGG 2 cut(s) 197, 255
Bpu10I CCTNAGC 1 cut(s) 24
BpuEI CTTGAG 1 cut(s) 260
Bsc4I CCNNNNNNNGG 1 cut(s) 260
Bse1I ACTGG 1 cut(s) 116
BseBI CCWGG 2 cut(s) 197, 255
BseLI CCNNNNNNNGG 1 cut(s) 260
BseMII CTCAG 1 cut(s) 38
BseNI ACTGG 1 cut(s) 116
BseYI CCCAGC 1 cut(s) 228
Bsh1236I CGCG 1 cut(s) 98
BslFI GGGAC 1 cut(s) 22
BslI CCNNNNNNNGG 1 cut(s) 260
BsmFI GGGAC 1 cut(s) 22
Bsp1286I GDGCHC 1 cut(s) 25
Bsp143I GATC 2 cut(s) 152, 199
BspCNI CTCAG 1 cut(s) 37
BspFNI CGCG 1 cut(s) 98
BspPI GGATC 2 cut(s) 147, 207
BsrI ACTGG 1 cut(s) 116
BssMI GATC 2 cut(s) 152, 199
Bst2UI CCWGG 2 cut(s) 197, 255
BstDEI CTNAG 1 cut(s) 24
BstFNI CGCG 1 cut(s) 98
BstHHI GCGC 1 cut(s) 98
BstKTI GATC 2 cut(s) 155, 202
BstMBI GATC 2 cut(s) 152, 199
BstNI CCWGG 2 cut(s) 197, 255
BstSCI CCNGG 2 cut(s) 195, 253
BstUI CGCG 1 cut(s) 98
BsuI GTATCC 1 cut(s) 101
CfoI GCGC 1 cut(s) 98
Csp6I GTAC 2 cut(s) 67, 244
CspCI CAANNNNNGTGG 2 cut(s) 115, 150
CviJI RGCY 5 cut(s) 23, 78, 146, 161, 228
CviKI_1 RGCY 5 cut(s) 23, 78, 146, 161, 228
CviQI GTAC 2 cut(s) 67, 244
DdeI CTNAG 1 cut(s) 24
DpnI GATC 2 cut(s) 154, 201
DpnII GATC 2 cut(s) 152, 199
Eco24I GRGCYC 1 cut(s) 25
Eco57I CTGAAG 1 cut(s) 299
EcoRII CCWGG 2 cut(s) 195, 253
EcoT38I GRGCYC 1 cut(s) 25
FaiI YATR 1 cut(s) 293
FaqI GGGAC 1 cut(s) 22
FriOI GRGCYC 1 cut(s) 25
GlaI GCGC 1 cut(s) 97
GsaI CCCAGC 1 cut(s) 232
HhaI GCGC 1 cut(s) 98
Hin6I GCGC 1 cut(s) 96
HinP1I GCGC 1 cut(s) 96
HphI GGTGA 1 cut(s) 40
Hpy188I TCNGA 2 cut(s) 93, 279
Hpy188III TCNNGA 2 cut(s) 26, 239
Hpy99I CGWCG 1 cut(s) 153
HpyAV CCTTC 1 cut(s) 97
HpyF3I CTNAG 1 cut(s) 24
HspAI GCGC 1 cut(s) 96
Kzo9I GATC 2 cut(s) 152, 199
LmnI GCTCC 3 cut(s) 93, 130, 171
MalI GATC 2 cut(s) 154, 201
MboI GATC 2 cut(s) 152, 199
MboII GAAGA 4 cut(s) 34, 37, 112, 242
MhlI GDGCHC 1 cut(s) 25
MnlI CCTC 1 cut(s) 171
MseI TTAA 1 cut(s) 141
MslI CAYNNNNRTG 1 cut(s) 53
MspA1I CMGCKG 1 cut(s) 228
MspR9I CCNGG 2 cut(s) 197, 255
MvaI CCWGG 2 cut(s) 197, 255
MvnI CGCG 1 cut(s) 98
NdeII GATC 2 cut(s) 152, 199
PfoI TCCNGGA 1 cut(s) 253
Psp6I CCWGG 2 cut(s) 195, 253
PspFI CCCAGC 1 cut(s) 228
PspGI CCWGG 2 cut(s) 195, 253
PvuII CAGCTG 1 cut(s) 228
RsaI GTAC 2 cut(s) 68, 245
RsaNI GTAC 2 cut(s) 67, 244
RseI CAYNNNNRTG 1 cut(s) 53
SaqAI TTAA 1 cut(s) 141
Sau3AI GATC 2 cut(s) 152, 199
ScaI AGTACT 1 cut(s) 245
ScrFI CCNGG 2 cut(s) 197, 255
SduI GDGCHC 1 cut(s) 25
SetI ASST 3 cut(s) 80, 163, 230
SmiMI CAYNNNNRTG 1 cut(s) 53
SmlI CTYRAG 1 cut(s) 239
SmoI CTYRAG 1 cut(s) 239
StyD4I CCNGG 2 cut(s) 195, 253
TaqI TCGA 2 cut(s) 148, 215
TatI WGTACW 2 cut(s) 66, 243
Tru1I TTAA 1 cut(s) 141
Tru9I TTAA 1 cut(s) 141
ZrmI AGTACT 1 cut(s) 245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.