Rroxscaffold_4G00317240
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000197
Physical Location & Seq
Forward (+)
42395806 .. 42398854
3049 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00317240.1

Sequence Viewer

Length: 1479 bp
ATGAGCAGCGAGAGGACGACGCCGCTTTCAGTGCCGGTAGGCTACAGGTTCCATCCCACCGAAGAGGAGCTGGTGAACCATTACTTGAAGAAGAAGATTCATGGCGGAAATGACTCCGAAATCAACCAAATCATCCCTGAAATCGACCTCTGCAAATACGAGCCGGCTGAGCTTCCTGGGCAGGTTCTGATTTTCGTGTTTTTGTGTGGGCAGCATTGTTGGGGACTGAGACAGAGGATCATGACATGGAGTGGTTCTTCTTCACCAGAAAGGCTTTTAAGTACAACAAAAGCTCTCGCTCGAATCGGAGCACCAAGAAGGGGATACTGGAAGATCACAGGGAAGGAGCGTGGAATTAAAGCTCGACGATCCAAAGCTGTGATTGGGATGAAGAAGACATTGACTTTTTACCAGGGTCGTGTGCCGAAATCGAAGAAGACCAGCTGGGTCATTCATGAGTACTATCTTCCTGGAAATGGAGTTATTAAGCAGGCCCGGGGTGACTTTGTTATCTGTCGCTTGAAGATTAGATCAGATAAGAAGGATTCTTCAGTCAGTAATGCAGGAGAACCCGGTAGCGCGAGTGTGTCTGAAATGAATCAAGTGGGAAATGAGGAGTTGCTATTCCATCAACCTCAGCCTCTGGATGACTGCTGCTCCTCAGCACTGCGGTCACCGGTGTCCCAAAAGCTGGAAGCTGTTCTGCAAACCAATGTCACTAATGATGATTGTAATGAGTTACAATCACCATTTGGAGATAGTAATTCTTGTCTATTAGGCGGGAATGAAGTTTCAACCTGTGATGAAAATGAGGCTGTGTATGATGTGTTTCCACAGCTACGTGATCTATCAGAACAAAATCTGGATTCACTCTTTGGTCCACATCAGCCACAATTATACTGCCCTGCCATACTGCAGCAGTCACCAATATACACAAAGCTGGGAGATGTTCCACATCCACTTCAGCCACAAGATTACGAGCCCTCAAAGTTTCAATCACCAATATACACAAAGCTGGAAAATGTTCCACATCCACTTCAGCCACAAGATTACCAGCCCTCAAAGTTGCAGTTACCAATATACACAAAGTTGGGAAATGTGCATCATCCTCAAACCAAAGAAAATCTGGAATCAGTGGTTTATCCATTCCAGCCACAAAATTTCACATCGCAGCCACTGATGTACACAGAATTTGGAGATGCTCTACATAATACTGAAAGCAATGAGTTGCAATCTTCATTTGGGGATAATGACTCTTCTCTCACAAAGTTCTTGAATACAAATTTTGCTTACGAGGATTGTTACTTATTTGATCAAACAGCAGAGACTCCTTTCAAAGACTCTAACCTGCCGAACTCACTGGGAAGGGTCTACCATGGGGATAGTGGAGTAAGCAATGATTCAAACACTGAAGTAGCCCATGGATGGGTACAATATTCGTTTCCATTAGCTATTGGAAATACCCTCCAATGTAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

492

Amino Acids

55.17

Weight (kDa)

5.73

Isoelectric Point (pI)

56.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 12 - 155 1.2e-28 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000197)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18010 FvH4_7g18010 FvH4_7g18021 FvH4_7g18070 FvH4_7g18070 FvH4_7g18200 FvH4_7g18250
malus_domestica MD01G1092200.v1.1 MD01G1092500.v1.1 MD01G1092600.v1.1 MD01G1092900.v1.1 MD01G1093000.v1.1 MD01G1093200.v1.1 MD01G1093500.v1.1 MD01G1093700.v1.1 MD01G1093800.v1.1 MD01G1093900.v1.1 MD01G1094000.v1.1 MD01G1094200.v1.1 MD01G1094400.v1.1 MD01G1094500.v1.1 MD01G1094700.v1.1 MD01G1094800.v1.1 MD01G1095100.v1.1 MD07G1162700.v1.1 MD07G1163200.v1.1 MD07G1163400.v1.1 MD07G1163700.v1.1 MD07G1164000.v1.1 MD10G1186100.v1.1
prunus_persica Prupe.2G201200_v2.0.a1 Prupe.2G201200_v2.0.a1 Prupe.2G201300_v2.0.a1 Prupe.2G201800_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202800_v2.0.a1 Prupe.2G202900_v2.0.a1 Prupe.2G203000_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204900_v2.0.a1
pyrus_communis pycom01g11610 pycom01g11650 pycom01g11670 pycom01g11680 pycom01g11700 pycom01g11710 pycom01g11720 pycom01g11730 pycom07g15770 pycom07g15860 pycom07g15870 pycom07g15890 pycom07g15900 pycom07g15920
rosa_chinensis RchiOBHm_Chr1g0333731 RchiOBHm_Chr1g0361411 RchiOBHm_Chr1g0361501 RchiOBHm_Chr1g0361551 RchiOBHm_Chr1g0361631 RchiOBHm_Chr1g0361691 RchiOBHm_Chr1g0361701
rosa_laevigata RLG00000011640 RLG00000014882 RLG00000027709 RLG00000027713 RLG00000027717 RLG00000027719 RLG00000029532 RLG00000030171 RLG00000030174 RLG00000030177 RLG00000030181 RLG00000030186
rosa_multiflora Rmu_co8135790.1_g000001 Rmu_co8371689.1_g000001 Rmu_co8391943.1_g000001 Rmu_co8469521.1_g000001 Rmu_co8502503.1_g000002 Rmu_sc0001034.1_g000001 Rmu_sc0002119.1_g000002 Rmu_sc0002119.1_g000009 Rmu_sc0002119.1_g000019 Rmu_sc0003426.1_g000005 Rmu_sc0003693.1_g000010 Rmu_sc0003704.1_g000007 Rmu_sc0006101.1_g000005 Rmu_sc0006417.1_g000006 Rmu_sc0007217.1_g000012 Rmu_sc0010384.1_g000001 Rmu_sc0011258.1_g000003 Rmu_sc0017253.1_g000002 Rmu_ssc0000062.1_g000022
rosa_roxburghii Rroxscaffold_159G00432930 Rroxscaffold_159G00433040 Rroxscaffold_159G00433060 Rroxscaffold_4G00294780 Rroxscaffold_4G00294810 Rroxscaffold_4G00294870 Rroxscaffold_4G00294930 Rroxscaffold_4G00294950 Rroxscaffold_4G00317240 Rroxscaffold_4G00325190 Rroxscaffold_4G00325210
rosa_rugosa Rorug01G0047400 Rorug01G0047800 Rorug01G0048100 Rorug01G0048100 Rorug01G0111500 Rorug01G0111500 Rorug01G0289800 Rorug01G0290300 Rorug01G0290700 Rorug01G0290900
rosa_samantha Rh1AG063000 Rh1AG064000 Rh1AG064400 Rh1AG133700 Rh1AG300300 Rh1AG300900 Rh1AG301000 Rh1AG301100 Rh1BG263800 Rh1BG264000 Rh1BG264100 Rh1CG281800 Rh1CG282100 Rh1CG282200 Rh1DG294000 Rh1DG294100 Rh5BG200600
rosa_wichuraiana Rw1G005400 Rw1G011170 Rw1G026570 Rw1G026580 Rw1G026610 Rw1G026640 Rw1G026670 Rw1G026700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 172, 1356
AccB7I CCANNNNNTGG 1 cut(s) 691
AccI GTMKAC 1 cut(s) 1371
AccII CGCG 1 cut(s) 581
AciI CCGC 4 cut(s) 23, 105, 670, 780
AclWI GGATC 2 cut(s) 245, 363
AcsI RAATTY 3 cut(s) 1159, 1190, 1282
AcuI CTGAAG 4 cut(s) 534, 947, 1022, 1431
AcyI GRCGYC 1 cut(s) 20
AfaI GTAC 4 cut(s) 283, 461, 1184, 1431
AfiI CCNNNNNNNGG 5 cut(s) 320, 476, 691, 1425, 1426
AgeI ACCGGT 1 cut(s) 676
AgsI TTSAA 7 cut(s) 88, 523, 795, 995, 1276, 1336, 1404
AjnI CCWGG 3 cut(s) 175, 411, 469
Alw21I GWGCWC 1 cut(s) 313
Alw26I GTCTC 2 cut(s) 223, 1319
AlwI GGATC 2 cut(s) 245, 363
AlwNI CAGNNNCTG 3 cut(s) 187, 643, 1177
Ama87I CYCGRG 1 cut(s) 495
AoxI GGCC 1 cut(s) 492
ApeKI GCWGC 5 cut(s) 6, 211, 654, 916, 1171
ApoI RAATTY 3 cut(s) 1159, 1190, 1282
AsiGI ACCGGT 1 cut(s) 676
Asp700I GAANNNNTTC 2 cut(s) 699, 1023
AspLEI GCGC 1 cut(s) 581
AspS9I GGNCC 2 cut(s) 493, 878
AsuC2I CCSGG 3 cut(s) 496, 497, 573
AsuHPI GGTGA 7 cut(s) 85, 255, 512, 666, 738, 915, 990
AvaI CYCGRG 1 cut(s) 495
AvaII GGWCC 1 cut(s) 878
BanII GRGCYC 1 cut(s) 984
BbsI GAAGAC 2 cut(s) 401, 443
Bbv12I GWGCWC 1 cut(s) 313
BbvCI CCTCAGC 2 cut(s) 636, 661
BbvI GCAGC 5 cut(s) 18, 223, 641, 928, 1183
BccI CCATC 3 cut(s) 60, 636, 1419
BciT130I CCWGG 3 cut(s) 177, 413, 471
BciVI GTATCC 1 cut(s) 317
BclI TGATCA 1 cut(s) 1312
BcnI CCSGG 3 cut(s) 496, 497, 573
BcoDI GTCTC 2 cut(s) 223, 1319
BfmI CTRYAG 2 cut(s) 43, 914
BfuAI ACCTGC 2 cut(s) 172, 1356
BfuI GTATCC 1 cut(s) 317
BisI GCNGC 6 cut(s) 7, 23, 212, 655, 917, 1172
BlpI GCTNAGC 1 cut(s) 168
BlsI GCNGC 6 cut(s) 8, 24, 213, 656, 918, 1173
BmcAI AGTACT 1 cut(s) 461
Bme1390I CCNGG 6 cut(s) 177, 413, 471, 496, 497, 573
Bme18I GGWCC 1 cut(s) 878
BmeT110I CYCGRG 1 cut(s) 495
BmgT120I GGNCC 2 cut(s) 493, 878
BmiI GGNNCC 1 cut(s) 50
BmrFI CCNGG 6 cut(s) 177, 413, 471, 496, 497, 573
BmrI ACTGGG 1 cut(s) 1370
BmsI GCATC 2 cut(s) 1111, 1189
BmuI ACTGGG 1 cut(s) 1370
BpiI GAAGAC 2 cut(s) 401, 443
Bpu10I CCTNAGC 2 cut(s) 636, 661
Bpu1102I GCTNAGC 1 cut(s) 168
BpuMI CCSGG 3 cut(s) 496, 497, 573
BsaAI YACGTR 1 cut(s) 842
BsaHI GRCGYC 1 cut(s) 20
BsaJI CCNNGG 6 cut(s) 176, 412, 495, 496, 1375, 1420
BsaWI WCCGGW 1 cut(s) 676
BsaXI ACNNNNNCTCC 2 cut(s) 641, 671
Bsc4I CCNNNNNNNGG 5 cut(s) 320, 476, 691, 1425, 1426
Bse118I RCCGGY 3 cut(s) 34, 163, 676
Bse1I ACTGG 2 cut(s) 332, 1365
Bse3DI GCAATG 2 cut(s) 1228, 1402
BseBI CCWGG 3 cut(s) 177, 413, 471
BseDI CCNNGG 6 cut(s) 176, 412, 495, 496, 1375, 1420
BseGI GGATG 8 cut(s) 52, 132, 393, 652, 955, 1030, 1105, 1430
BseLI CCNNNNNNNGG 5 cut(s) 320, 476, 691, 1425, 1426
BseMI GCAATG 2 cut(s) 1228, 1402
BseMII CTCAG 4 cut(s) 159, 218, 650, 675
BseNI ACTGG 2 cut(s) 332, 1365
BseRI GAGGAG 3 cut(s) 80, 629, 649
BseXI GCAGC 5 cut(s) 18, 223, 641, 928, 1183
BseYI CCCAGC 2 cut(s) 444, 940
Bsh1236I CGCG 1 cut(s) 581
BshFI GGCC 1 cut(s) 494
BshTI ACCGGT 1 cut(s) 676
BsiHKAI GWGCWC 1 cut(s) 313
BsiHKCI CYCGRG 1 cut(s) 495
BsiSI CCGG 5 cut(s) 35, 164, 496, 573, 677
BslFI GGGAC 2 cut(s) 237, 667
BslI CCNNNNNNNGG 5 cut(s) 320, 476, 691, 1425, 1426
BsmAI GTCTC 2 cut(s) 223, 1319
BsmFI GGGAC 2 cut(s) 237, 667
BsnI GGCC 1 cut(s) 494
BsoBI CYCGRG 1 cut(s) 495
Bsp1286I GDGCHC 2 cut(s) 313, 984
Bsp1407I TGTACA 1 cut(s) 1182
Bsp143I GATC 6 cut(s) 237, 333, 368, 530, 844, 1312
Bsp1720I GCTNAGC 1 cut(s) 168
Bsp19I CCATGG 2 cut(s) 1375, 1420
BspACI CCGC 4 cut(s) 23, 105, 670, 780
BspANI GGCC 1 cut(s) 494
BspCNI CTCAG 4 cut(s) 160, 219, 649, 674
BspFNI CGCG 1 cut(s) 581
BspHI TCATGA 2 cut(s) 240, 454
BspLI GGNNCC 1 cut(s) 50
BspMAI CTGCAG 1 cut(s) 918
BspMI ACCTGC 2 cut(s) 172, 1356
BspPI GGATC 2 cut(s) 245, 363
BsrDI GCAATG 2 cut(s) 1228, 1402
BsrFI RCCGGY 3 cut(s) 34, 163, 676
BsrGI TGTACA 1 cut(s) 1182
BsrI ACTGG 2 cut(s) 332, 1365
BssAI RCCGGY 3 cut(s) 34, 163, 676
BssECI CCNNGG 6 cut(s) 176, 412, 495, 496, 1375, 1420
BssMI GATC 6 cut(s) 237, 333, 368, 530, 844, 1312
BssNI GRCGYC 1 cut(s) 20
BssT1I CCWWGG 2 cut(s) 1375, 1420
Bst2UI CCWGG 3 cut(s) 177, 413, 471
Bst6I CTCTTC 2 cut(s) 57, 1261
BstACI GRCGYC 1 cut(s) 20
BstAUI TGTACA 1 cut(s) 1182
BstBAI YACGTR 1 cut(s) 842
BstC8I GCNNGC 2 cut(s) 165, 492
BstDEI CTNAG 4 cut(s) 168, 227, 636, 661
BstDSI CCRYGG 2 cut(s) 1375, 1420
BstEII GGTNACC 1 cut(s) 672
BstF5I GGATG 8 cut(s) 52, 132, 393, 652, 955, 1030, 1105, 1430
BstFNI CGCG 1 cut(s) 581
BstHHI GCGC 1 cut(s) 581
BstKTI GATC 6 cut(s) 240, 336, 371, 533, 847, 1315
BstMAI GTCTC 2 cut(s) 223, 1319
BstMBI GATC 6 cut(s) 237, 333, 368, 530, 844, 1312
BstMWI GCNNNNNNNGC 3 cut(s) 31, 169, 178
BstNI CCWGG 3 cut(s) 177, 413, 471
BstPI GGTNACC 1 cut(s) 672
BstSCI CCNGG 6 cut(s) 175, 411, 469, 494, 495, 571
BstSFI CTRYAG 2 cut(s) 43, 914
BstUI CGCG 1 cut(s) 581
BstV1I GCAGC 5 cut(s) 18, 223, 641, 928, 1183
BstV2I GAAGAC 2 cut(s) 401, 443
BsuI GTATCC 1 cut(s) 317
BsuRI GGCC 1 cut(s) 494
BtgI CCRYGG 2 cut(s) 1375, 1420
BtgZI GCGATG 1 cut(s) 1152
BtsCI GGATG 8 cut(s) 52, 132, 393, 652, 955, 1030, 1105, 1430
BtsI GCAGTG 1 cut(s) 665
BtsIMutI CAGTG 6 cut(s) 36, 665, 1140, 1175, 1358, 1407
BveI ACCTGC 2 cut(s) 172, 1356
Cac8I GCNNGC 2 cut(s) 165, 492
CaiI CAGNNNCTG 3 cut(s) 187, 643, 1177
CciI TCATGA 2 cut(s) 240, 454
CfoI GCGC 1 cut(s) 581
Cfr10I RCCGGY 3 cut(s) 34, 163, 676
Cfr13I GGNCC 2 cut(s) 493, 878
Cfr9I CCCGGG 1 cut(s) 495
CseI GACGC 1 cut(s) 28
Csp6I GTAC 4 cut(s) 282, 460, 1183, 1430
CspAI ACCGGT 1 cut(s) 676
CviAII CATG 6 cut(s) 101, 241, 246, 455, 1376, 1421
CviQI GTAC 4 cut(s) 282, 460, 1183, 1430
DdeI CTNAG 4 cut(s) 168, 227, 636, 661
DpnI GATC 6 cut(s) 239, 335, 370, 532, 846, 1314
DpnII GATC 6 cut(s) 237, 333, 368, 530, 844, 1312
Eam1104I CTCTTC 2 cut(s) 57, 1261
EarI CTCTTC 2 cut(s) 57, 1261
EciI GGCGGA 1 cut(s) 120
Eco130I CCWWGG 2 cut(s) 1375, 1420
Eco24I GRGCYC 1 cut(s) 984
Eco47I GGWCC 1 cut(s) 878
Eco57I CTGAAG 4 cut(s) 534, 947, 1022, 1431
Eco88I CYCGRG 1 cut(s) 495
Eco91I GGTNACC 1 cut(s) 672
EcoO65I GGTNACC 1 cut(s) 672
EcoRII CCWGG 3 cut(s) 175, 411, 469
EcoT14I CCWWGG 2 cut(s) 1375, 1420
EcoT38I GRGCYC 1 cut(s) 984
ErhI CCWWGG 2 cut(s) 1375, 1420
FaeI CATG 6 cut(s) 104, 244, 249, 458, 1379, 1424
FaqI GGGAC 2 cut(s) 237, 667
FatI CATG 6 cut(s) 100, 240, 245, 454, 1375, 1420
FauI CCCGC 1 cut(s) 773
FbaI TGATCA 1 cut(s) 1312
FblI GTMKAC 1 cut(s) 1371
Fnu4HI GCNGC 6 cut(s) 7, 23, 212, 655, 917, 1172
FokI GGATG 8 cut(s) 39, 119, 400, 659, 942, 1017, 1092, 1437
FriOI GRGCYC 1 cut(s) 984
Fsp4HI GCNGC 6 cut(s) 7, 23, 212, 655, 917, 1172
GlaI GCGC 1 cut(s) 580
GluI GCNGC 6 cut(s) 7, 23, 212, 655, 917, 1172
GsaI CCCAGC 2 cut(s) 448, 944
HaeIII GGCC 1 cut(s) 494
HapII CCGG 5 cut(s) 35, 164, 496, 573, 677
HgaI GACGC 1 cut(s) 28
HhaI GCGC 1 cut(s) 581
Hin1I GRCGYC 1 cut(s) 20
Hin1II CATG 6 cut(s) 104, 244, 249, 458, 1379, 1424
Hin6I GCGC 1 cut(s) 579
HinP1I GCGC 1 cut(s) 579
HpaII CCGG 5 cut(s) 35, 164, 496, 573, 677
HphI GGTGA 7 cut(s) 85, 255, 512, 666, 738, 915, 990
Hpy166II GTNNAC 4 cut(s) 76, 881, 1185, 1372
Hpy188I TCNGA 6 cut(s) 118, 189, 308, 535, 592, 853
Hpy188III TCNNGA 6 cut(s) 241, 455, 644, 863, 1127, 1273
Hpy8I GTNNAC 4 cut(s) 76, 881, 1185, 1372
Hpy99I CGWCG 2 cut(s) 22, 369
HpyAV CCTTC 4 cut(s) 312, 337, 535, 1359
HpyCH4IV ACGT 1 cut(s) 841
HpyCH4V TGCA 7 cut(s) 153, 563, 706, 916, 1069, 1102, 1231
HpyF10VI GCNNNNNNNGC 3 cut(s) 31, 169, 178
HpyF3I CTNAG 4 cut(s) 168, 227, 636, 661
HpySE526I ACGT 1 cut(s) 841
Hsp92I GRCGYC 1 cut(s) 20
Hsp92II CATG 6 cut(s) 104, 244, 249, 458, 1379, 1424
HspAI GCGC 1 cut(s) 579
KroI GCCGGC 1 cut(s) 163
KroNI GCCGGC 1 cut(s) 165
Ksp22I TGATCA 1 cut(s) 1312
Kzo9I GATC 6 cut(s) 237, 333, 368, 530, 844, 1312
LmnI GCTCC 4 cut(s) 67, 308, 346, 662
Lsp1109I GCAGC 5 cut(s) 18, 223, 641, 928, 1183
LweI GCATC 2 cut(s) 1111, 1189
MaeII ACGT 1 cut(s) 841
MaeIII GTNAC 7 cut(s) 500, 672, 715, 738, 921, 1071, 1301
MalI GATC 6 cut(s) 239, 335, 370, 532, 846, 1314
MboI GATC 6 cut(s) 237, 333, 368, 530, 844, 1312
MhlI GDGCHC 2 cut(s) 313, 984
MluCI AATT 6 cut(s) 354, 763, 893, 1159, 1190, 1282
MlyI GAGTC 4 cut(s) 107, 1247, 1321, 1334
MroNI GCCGGC 1 cut(s) 163
MroXI GAANNNNTTC 2 cut(s) 699, 1023
MseI TTAA 3 cut(s) 278, 357, 486
MspA1I CMGCKG 1 cut(s) 444
MspI CCGG 5 cut(s) 35, 164, 496, 573, 677
MspR9I CCNGG 6 cut(s) 177, 413, 471, 496, 497, 573
MvaI CCWGG 3 cut(s) 177, 413, 471
MvnI CGCG 1 cut(s) 581
MwoI GCNNNNNNNGC 3 cut(s) 31, 169, 178
NaeI GCCGGC 1 cut(s) 165
NciI CCSGG 3 cut(s) 496, 497, 573
NcoI CCATGG 2 cut(s) 1375, 1420
NdeII GATC 6 cut(s) 237, 333, 368, 530, 844, 1312
NgoMIV GCCGGC 1 cut(s) 163
NlaIII CATG 6 cut(s) 104, 244, 249, 458, 1379, 1424
NlaIV GGNNCC 1 cut(s) 50
NmuCI GTSAC 4 cut(s) 500, 672, 715, 921
PagI TCATGA 2 cut(s) 240, 454
PdiI GCCGGC 1 cut(s) 165
PdmI GAANNNNTTC 2 cut(s) 699, 1023
PfeI GAWTC 7 cut(s) 97, 303, 545, 598, 866, 1130, 1400
PflMI CCANNNNNTGG 1 cut(s) 691
PfoI TCCNGGA 1 cut(s) 469
PinAI ACCGGT 1 cut(s) 676
PkrI GCNGC 6 cut(s) 8, 24, 213, 656, 918, 1173
PleI GAGTC 4 cut(s) 107, 1247, 1321, 1334
PpsI GAGTC 4 cut(s) 107, 1247, 1321, 1334
Ppu21I YACGTR 1 cut(s) 842
Psp6I CCWGG 3 cut(s) 175, 411, 469
PspEI GGTNACC 1 cut(s) 672
PspFI CCCAGC 2 cut(s) 444, 940
PspGI CCWGG 3 cut(s) 175, 411, 469
PspN4I GGNNCC 1 cut(s) 50
PspPI GGNCC 2 cut(s) 493, 878
PstI CTGCAG 1 cut(s) 918
PstNI CAGNNNCTG 3 cut(s) 187, 643, 1177
PvuII CAGCTG 1 cut(s) 444
RsaI GTAC 4 cut(s) 283, 461, 1184, 1431
RsaNI GTAC 4 cut(s) 282, 460, 1183, 1430
SaqAI TTAA 3 cut(s) 278, 357, 486
SatI GCNGC 6 cut(s) 7, 23, 212, 655, 917, 1172
Sau3AI GATC 6 cut(s) 237, 333, 368, 530, 844, 1312
Sau96I GGNCC 2 cut(s) 493, 878
ScaI AGTACT 1 cut(s) 461
SchI GAGTC 4 cut(s) 107, 1247, 1321, 1334
ScrFI CCNGG 6 cut(s) 177, 413, 471, 496, 497, 573
SduI GDGCHC 2 cut(s) 313, 984
SfaNI GCATC 2 cut(s) 1111, 1189
SfcI CTRYAG 2 cut(s) 43, 914
SgrAI CRCCGGYG 1 cut(s) 676
SinI GGWCC 1 cut(s) 878
SmaI CCCGGG 1 cut(s) 497
Sse9I AATT 6 cut(s) 354, 763, 893, 1159, 1190, 1282
SsiI CCGC 4 cut(s) 23, 105, 670, 780
SspI AATATT 1 cut(s) 1436
StyD4I CCNGG 6 cut(s) 175, 411, 469, 494, 495, 571
StyI CCWWGG 2 cut(s) 1375, 1420
TaiI ACGT 1 cut(s) 844
TaqI TCGA 4 cut(s) 144, 301, 364, 431
TasI AATT 6 cut(s) 354, 763, 893, 1159, 1190, 1282
TatI WGTACW 3 cut(s) 281, 459, 1182
TauI GCSGC 1 cut(s) 25
TfiI GAWTC 7 cut(s) 97, 303, 545, 598, 866, 1130, 1400
Tru1I TTAA 3 cut(s) 278, 357, 486
Tru9I TTAA 3 cut(s) 278, 357, 486
TscAI CASTG 6 cut(s) 36, 672, 1140, 1182, 1365, 1414
TseFI GTSAC 4 cut(s) 500, 672, 715, 921
TseI GCWGC 5 cut(s) 6, 211, 654, 916, 1171
Tsp45I GTSAC 4 cut(s) 500, 672, 715, 921
TspDTI ATGAA 7 cut(s) 89, 404, 443, 611, 801, 819, 1227
TspMI CCCGGG 1 cut(s) 495
TspRI CASTG 6 cut(s) 36, 672, 1140, 1182, 1365, 1414
Van91I CCANNNNNTGG 1 cut(s) 691
VpaK11BI GGWCC 1 cut(s) 878
XapI RAATTY 3 cut(s) 1159, 1190, 1282
XcmI CCANNNNNNNNNTGG 2 cut(s) 1123, 1382
XmaI CCCGGG 1 cut(s) 495
XmiI GTMKAC 1 cut(s) 1371
XmnI GAANNNNTTC 2 cut(s) 699, 1023
ZrmI AGTACT 1 cut(s) 461
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.