Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0000197

Physical Location & Seq

Genomic Coordinates Reverse (-)

23860144 .. 23863461

Gene Structure 3318 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1163700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1524 bp

ATGGCTTCCAATGGAATCCGCTTCACCAGAGTAGAAGTAGGAGGCATGTTACTGCAAGTGGGATACCGATTCCACCCTACAAAAGAAGAGCTGATCAGCCATTACTTGAAGTTGAAGCTCCGGGGAATGGATTCCCTCGTCAGCGACGCCATCCGTGAAATCAATATCTGCAACTACGAGCCCTGGGAATTGCCTGAGATTTCACTGATAAAGTCGGATGATGAATGGTACTTCTACAACCGACCAATTTACAAAAAAAACAGCAGAAACGAAGTTGAAAGGGCGACGGCCACAGGCTTCTGGAAGAGCACTGGGAAGGAAAAAATAGTCAAGGATCGAGACAACAAAATTATCGGTAAAAAGAGGATTCTGACATTTCGCCAAGGTCGCGGTCGTAACGCCCCAATTACCAACTGGGTCATGCATGAGTTTTCCATCCCTCAAATCAATCCTAATGCTAATCAGAGGGATTTCGTTCTCTGTTACGTAAAGAAGAAATCAGGTAAGAATACGGATGTTGCAACCGGTGATGAAGGTGAATCTAGTAATTACAACAATGCACATGACTTTGAAAATCAACTGCAACCAGCACATAATATGCATGTTGAAGAGGAACATAATCAGCCACCACAAAATCTGGACATTTTTCAGTGGCATATGGGCAGTATGCTTGCAAATGCGCATGATAATAATGATTACCATGGAACGCAATCTGCACCTGGAGCTAATGAATCGGATGGAGATTCAGAAGAGTTCGTAAATACAGTTATTGTTGACCCGTATGAGGCTTTCAGTGAACAAATAACTCACGCTAACGTCTTAAATAACTCCACTCTGCCACAGTCACCTAGGAAGGTGTATTTAAAGGATTGTGGAGTAAGTAGTGGCTCAGCCACAGAAGTACAACATGCAGTTGATGAAGAGGGCCAGTCCCAGGGCGGGAAAAGTGTTCCGCTTCGTAACCGGATCTTAATACAGGCTGCTTCCTCTACCAATGTATTACCTAAACCTCAGACTGATCGTCTTCAATCAGTCAGTGATGAAGATTCTGGTGCATCAAGACCCATTAAAAAGAGTGCTTCCTCTCTGGATGTAGATGCAGATAGCCTTCAGATTAACTCTATTCAGTTAGCCTCCGACGAATACTATAACAATGAGAGAAGAACATATTCAACAAGTGCCCTCTTAGCACCAGGCAAACCTAATGAATTAGAACAGCAGCAAAGCAAGGCCAAAGTAGCTGCAGAGCGTCGAGCTGCTGTTGATTTTCCCCCGAAGAGGAACTTTATAACAGAATCTAACAAAGACGCAGAGGCGGTTCAAGGCAATAATACAGAAAAGGGTTTGAAGCAGACACACAATGCAACCACCGCCGGCAATTGGATGAGCTGTTCTTTCATTTCCTGGGAAACTTCCCCCCCATTAACAAGTCCCCCATCAGTATACCTTTTCAACACGGTTCTAGGTGCGATATTGTTCCTTGTTTTTGCTTGGGAAGTAGTTTTATACGGGCAGTGGTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016020 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071944 GO:0080090 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

508

Amino Acids

56.88

Weight (kDa)

5.79

Isoelectric Point (pI)

45.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	20 - 146	6.1e-35	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000197)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g18010 FvH4_7g18010 FvH4_7g18021 FvH4_7g18070 FvH4_7g18070 FvH4_7g18200 FvH4_7g18250
malus_domestica	MD01G1092200.v1.1 MD01G1092500.v1.1 MD01G1092600.v1.1 MD01G1092900.v1.1 MD01G1093000.v1.1 MD01G1093200.v1.1 MD01G1093500.v1.1 MD01G1093700.v1.1 MD01G1093800.v1.1 MD01G1093900.v1.1 MD01G1094000.v1.1 MD01G1094200.v1.1 MD01G1094400.v1.1 MD01G1094500.v1.1 MD01G1094700.v1.1 MD01G1094800.v1.1 MD01G1095100.v1.1 MD07G1162700.v1.1 MD07G1163200.v1.1 MD07G1163400.v1.1 MD07G1163700.v1.1 MD07G1164000.v1.1 MD10G1186100.v1.1
prunus_persica	Prupe.2G201200_v2.0.a1 Prupe.2G201200_v2.0.a1 Prupe.2G201300_v2.0.a1 Prupe.2G201800_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202800_v2.0.a1 Prupe.2G202900_v2.0.a1 Prupe.2G203000_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204900_v2.0.a1
pyrus_communis	pycom01g11610 pycom01g11650 pycom01g11670 pycom01g11680 pycom01g11700 pycom01g11710 pycom01g11720 pycom01g11730 pycom07g15770 pycom07g15860 pycom07g15870 pycom07g15890 pycom07g15900 pycom07g15920
rosa_chinensis	RchiOBHm_Chr1g0333731 RchiOBHm_Chr1g0361411 RchiOBHm_Chr1g0361501 RchiOBHm_Chr1g0361551 RchiOBHm_Chr1g0361631 RchiOBHm_Chr1g0361691 RchiOBHm_Chr1g0361701
rosa_laevigata	RLG00000011640 RLG00000014882 RLG00000027709 RLG00000027713 RLG00000027717 RLG00000027719 RLG00000029532 RLG00000030171 RLG00000030174 RLG00000030177 RLG00000030181 RLG00000030186
rosa_multiflora	Rmu_co8135790.1_g000001 Rmu_co8371689.1_g000001 Rmu_co8391943.1_g000001 Rmu_co8469521.1_g000001 Rmu_co8502503.1_g000002 Rmu_sc0001034.1_g000001 Rmu_sc0002119.1_g000002 Rmu_sc0002119.1_g000009 Rmu_sc0002119.1_g000019 Rmu_sc0003426.1_g000005 Rmu_sc0003693.1_g000010 Rmu_sc0003704.1_g000007 Rmu_sc0006101.1_g000005 Rmu_sc0006417.1_g000006 Rmu_sc0007217.1_g000012 Rmu_sc0010384.1_g000001 Rmu_sc0011258.1_g000003 Rmu_sc0017253.1_g000002 Rmu_ssc0000062.1_g000022
rosa_roxburghii	Rroxscaffold_159G00432930 Rroxscaffold_159G00433040 Rroxscaffold_159G00433060 Rroxscaffold_4G00294780 Rroxscaffold_4G00294810 Rroxscaffold_4G00294870 Rroxscaffold_4G00294930 Rroxscaffold_4G00294950 Rroxscaffold_4G00317240 Rroxscaffold_4G00325190 Rroxscaffold_4G00325210
rosa_rugosa	Rorug01G0047400 Rorug01G0047800 Rorug01G0048100 Rorug01G0048100 Rorug01G0111500 Rorug01G0111500 Rorug01G0289800 Rorug01G0290300 Rorug01G0290700 Rorug01G0290900
rosa_samantha	Rh1AG063000 Rh1AG064000 Rh1AG064400 Rh1AG133700 Rh1AG300300 Rh1AG300900 Rh1AG301000 Rh1AG301100 Rh1BG263800 Rh1BG264000 Rh1BG264100 Rh1CG281800 Rh1CG282100 Rh1CG282200 Rh1DG294000 Rh1DG294100 Rh5BG200600
rosa_wichuraiana	Rw1G005400 Rw1G011170 Rw1G026570 Rw1G026580 Rw1G026610 Rw1G026640 Rw1G026670 Rw1G026700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1289
Acc16I	TGCGCA	1 cut(s)	681
AccI	GTMKAC	1 cut(s)	1443
AccII	CGCG	1 cut(s)	390
AciI	CCGC	6 cut(s)	19, 390, 939, 953, 1316, 1371
AclWI	GGATC	2 cut(s)	342, 974
AcoI	YGGCCR	1 cut(s)	288
AcuI	CTGAAG	1 cut(s)	1094
AcyI	GRCGYC	1 cut(s)	147
AfaI	GTAC	2 cut(s)	230, 903
AfiI	CCNNNNNNNGG	6 cut(s)	127, 784, 934, 939, 1278, 1380
AgeI	ACCGGT	1 cut(s)	524
AhdI	GACNNNNNGTC	1 cut(s)	1020
AjnI	CCWGG	5 cut(s)	182, 718, 933, 1192, 1403
AloI	GAACNNNNNNTCC	2 cut(s)	1375, 1407
AluBI	AGCT	6 cut(s)	91, 118, 725, 1241, 1256, 1389
AluI	AGCT	6 cut(s)	91, 118, 725, 1241, 1256, 1389
Alw21I	GWGCWC	1 cut(s)	311
Alw26I	GTCTC	1 cut(s)	333
AlwI	GGATC	2 cut(s)	342, 974
AoxI	GGCC	3 cut(s)	288, 925, 1230
ApeKI	GCWGC	4 cut(s)	980, 1219, 1241, 1256
AsiGI	ACCGGT	1 cut(s)	524
Asp700I	GAANNNNTTC	2 cut(s)	130, 1168
AspA2I	CCTAGG	1 cut(s)	848
AspLEI	GCGC	1 cut(s)	682
AspS9I	GGNCC	1 cut(s)	925
AsuC2I	CCSGG	1 cut(s)	122
AsuHPI	GGTGA	4 cut(s)	16, 539, 548, 837
AvrII	CCTAGG	1 cut(s)	848
BaeGI	GKGCMC	1 cut(s)	1183
BanII	GRGCYC	1 cut(s)	183
BbsI	GAAGAC	1 cut(s)	1016
Bbv12I	GWGCWC	1 cut(s)	311
BbvI	GCAGC	4 cut(s)	967, 1228, 1231, 1243
BccI	CCATC	4 cut(s)	158, 443, 731, 1444
BceAI	ACGGC	1 cut(s)	303
BciT130I	CCWGG	5 cut(s)	184, 720, 935, 1194, 1405
BciVI	GTATCC	1 cut(s)	56
BclI	TGATCA	1 cut(s)	93
BcnI	CCSGG	1 cut(s)	122
BcoDI	GTCTC	1 cut(s)	333
BfaI	CTAG	4 cut(s)	543, 849, 1463, 1522
BfmI	CTRYAG	1 cut(s)	1242
BfuI	GTATCC	1 cut(s)	56
BisI	GCNGC	4 cut(s)	981, 1220, 1242, 1257
BlnI	CCTAGG	1 cut(s)	848
BlpI	GCTNAGC	1 cut(s)	889
BlsI	GCNGC	4 cut(s)	982, 1221, 1243, 1258
Bme1390I	CCNGG	6 cut(s)	122, 184, 720, 935, 1194, 1405
BmeRI	GACNNNNNGTC	1 cut(s)	1020
BmgT120I	GGNCC	1 cut(s)	925
BmrFI	CCNGG	6 cut(s)	122, 184, 720, 935, 1194, 1405
BmrI	ACTGGG	2 cut(s)	321, 424
BmsI	GCATC	2 cut(s)	1064, 1087
BmuI	ACTGGG	2 cut(s)	321, 424
BpiI	GAAGAC	1 cut(s)	1016
BpmI	CTGGAG	1 cut(s)	741
Bpu1102I	GCTNAGC	1 cut(s)	889
BpuMI	CCSGG	1 cut(s)	122
BsaAI	YACGTR	1 cut(s)	487
BsaHI	GRCGYC	1 cut(s)	147
BsaJI	CCNNGG	9 cut(s)	121, 182, 183, 382, 700, 848, 933, 934, 1404
BsaWI	WCCGGW	2 cut(s)	524, 963
Bsc4I	CCNNNNNNNGG	6 cut(s)	127, 784, 934, 939, 1278, 1380
Bse118I	RCCGGY	2 cut(s)	524, 1373
Bse1I	ACTGG	3 cut(s)	316, 419, 928
BseBI	CCWGG	5 cut(s)	184, 720, 935, 1194, 1405
BseDI	CCNNGG	9 cut(s)	121, 182, 183, 382, 700, 848, 933, 934, 1404
BseGI	GGATG	7 cut(s)	150, 223, 435, 520, 742, 1096, 1389
BseLI	CCNNNNNNNGG	6 cut(s)	127, 784, 934, 939, 1278, 1380
BseMII	CTCAG	3 cut(s)	186, 903, 1025
BseNI	ACTGG	3 cut(s)	316, 419, 928
BseSI	GKGCMC	1 cut(s)	1183
BseXI	GCAGC	4 cut(s)	967, 1228, 1231, 1243
BsgI	GTGCAG	1 cut(s)	699
Bsh1236I	CGCG	1 cut(s)	390
Bsh1285I	CGRYCG	1 cut(s)	394
BshFI	GGCC	3 cut(s)	290, 927, 1232
BshTI	ACCGGT	1 cut(s)	524
BsiEI	CGRYCG	1 cut(s)	394
BsiHKAI	GWGCWC	1 cut(s)	311
BsiSI	CCGG	4 cut(s)	121, 525, 964, 1374
BslFI	GGGAC	2 cut(s)	916, 1416
BslI	CCNNNNNNNGG	6 cut(s)	127, 784, 934, 939, 1278, 1380
BsmAI	GTCTC	1 cut(s)	333
BsmFI	GGGAC	2 cut(s)	916, 1416
BsnI	GGCC	3 cut(s)	290, 927, 1232
Bsp1286I	GDGCHC	3 cut(s)	183, 311, 1183
Bsp143I	GATC	4 cut(s)	93, 334, 966, 1018
Bsp1720I	GCTNAGC	1 cut(s)	889
Bsp19I	CCATGG	1 cut(s)	700
BspACI	CCGC	6 cut(s)	19, 390, 939, 953, 1316, 1371
BspANI	GGCC	3 cut(s)	290, 927, 1232
BspCNI	CTCAG	3 cut(s)	187, 902, 1024
BspFNI	CGCG	1 cut(s)	390
BspMAI	CTGCAG	1 cut(s)	1246
BspPI	GGATC	2 cut(s)	342, 974
BspQI	GCTCTTC	2 cut(s)	81, 299
BsrFI	RCCGGY	2 cut(s)	524, 1373
BsrI	ACTGG	3 cut(s)	316, 419, 928
BssAI	RCCGGY	2 cut(s)	524, 1373
BssECI	CCNNGG	9 cut(s)	121, 182, 183, 382, 700, 848, 933, 934, 1404
BssMI	GATC	4 cut(s)	93, 334, 966, 1018
BssNAI	GTATAC	1 cut(s)	1444
BssNI	GRCGYC	1 cut(s)	147
BssT1I	CCWWGG	3 cut(s)	382, 700, 848
Bst1107I	GTATAC	1 cut(s)	1444
Bst2UI	CCWGG	5 cut(s)	184, 720, 935, 1194, 1405
Bst4CI	ACNGT	3 cut(s)	766, 843, 1459
Bst6I	CTCTTC	6 cut(s)	81, 299, 603, 744, 915, 1271
BstACI	GRCGYC	1 cut(s)	147
BstBAI	YACGTR	1 cut(s)	487
BstC8I	GCNNGC	2 cut(s)	672, 1375
BstDEI	CTNAG	4 cut(s)	195, 889, 1011, 1186
BstDSI	CCRYGG	1 cut(s)	700
BstF5I	GGATG	7 cut(s)	150, 223, 435, 520, 742, 1096, 1389
BstFNI	CGCG	1 cut(s)	390
BstHHI	GCGC	1 cut(s)	682
BstKTI	GATC	4 cut(s)	96, 337, 969, 1021
BstMAI	GTCTC	1 cut(s)	333
BstMBI	GATC	4 cut(s)	93, 334, 966, 1018
BstMCI	CGRYCG	1 cut(s)	394
BstMWI	GCNNNNNNNGC	5 cut(s)	387, 722, 1187, 1238, 1370
BstNI	CCWGG	5 cut(s)	184, 720, 935, 1194, 1405
BstNSI	RCATGY	3 cut(s)	49, 605, 911
BstSCI	CCNGG	6 cut(s)	120, 182, 718, 933, 1192, 1403
BstSFI	CTRYAG	1 cut(s)	1242
BstSLI	GKGCMC	1 cut(s)	1183
BstSNI	TACGTA	1 cut(s)	487
BstUI	CGCG	1 cut(s)	390
BstV1I	GCAGC	4 cut(s)	967, 1228, 1231, 1243
BstV2I	GAAGAC	1 cut(s)	1016
BstX2I	RGATCY	1 cut(s)	966
BstYI	RGATCY	1 cut(s)	966
BstZ17I	GTATAC	1 cut(s)	1444
BsuI	GTATCC	1 cut(s)	56
BsuRI	GGCC	3 cut(s)	290, 927, 1232
BtgI	CCRYGG	1 cut(s)	700
BtsCI	GGATG	7 cut(s)	150, 223, 435, 520, 742, 1096, 1389
BtsI	GCAGTG	1 cut(s)	1520
BtsIMutI	CAGTG	6 cut(s)	203, 309, 656, 799, 1042, 1520
Cac8I	GCNNGC	2 cut(s)	672, 1375
CfoI	GCGC	1 cut(s)	682
Cfr10I	RCCGGY	2 cut(s)	524, 1373
Cfr13I	GGNCC	1 cut(s)	925
CseI	GACGC	3 cut(s)	155, 1238, 1316
Csp6I	GTAC	2 cut(s)	229, 902
CspAI	ACCGGT	1 cut(s)	524
CviAII	CATG	8 cut(s)	46, 421, 425, 563, 602, 683, 701, 908
CviQI	GTAC	2 cut(s)	229, 902
DdeI	CTNAG	4 cut(s)	195, 889, 1011, 1186
DpnI	GATC	4 cut(s)	95, 336, 968, 1020
DpnII	GATC	4 cut(s)	93, 334, 966, 1018
DraI	TTTAAA	1 cut(s)	864
DriI	GACNNNNNGTC	1 cut(s)	1020
EaeI	YGGCCR	1 cut(s)	288
Eam1104I	CTCTTC	6 cut(s)	81, 299, 603, 744, 915, 1271
Eam1105I	GACNNNNNGTC	1 cut(s)	1020
EarI	CTCTTC	6 cut(s)	81, 299, 603, 744, 915, 1271
Eco105I	TACGTA	1 cut(s)	487
Eco130I	CCWWGG	3 cut(s)	382, 700, 848
Eco24I	GRGCYC	1 cut(s)	183
Eco57I	CTGAAG	1 cut(s)	1094
EcoRII	CCWGG	5 cut(s)	182, 718, 933, 1192, 1403
EcoT14I	CCWWGG	3 cut(s)	382, 700, 848
EcoT22I	ATGCAT	2 cut(s)	426, 603
EcoT38I	GRGCYC	1 cut(s)	183
ErhI	CCWWGG	3 cut(s)	382, 700, 848
FaeI	CATG	8 cut(s)	49, 424, 428, 566, 605, 686, 704, 911
FalI	AAGNNNNNCTT	2 cut(s)	1268, 1300
FaqI	GGGAC	2 cut(s)	916, 1416
FatI	CATG	8 cut(s)	45, 420, 424, 562, 601, 682, 700, 907
FauI	CCCGC	1 cut(s)	932
FauNDI	CATATG	1 cut(s)	657
FbaI	TGATCA	1 cut(s)	93
FblI	GTMKAC	1 cut(s)	1443
Fnu4HI	GCNGC	4 cut(s)	981, 1220, 1242, 1257
FokI	GGATG	7 cut(s)	137, 230, 422, 527, 749, 1103, 1396
FriOI	GRGCYC	1 cut(s)	183
Fsp4HI	GCNGC	4 cut(s)	981, 1220, 1242, 1257
FspAI	RTGCGCAY	1 cut(s)	681
FspBI	CTAG	4 cut(s)	543, 849, 1463, 1522
FspI	TGCGCA	1 cut(s)	681
GlaI	GCGC	1 cut(s)	681
GluI	GCNGC	4 cut(s)	981, 1220, 1242, 1257
GsuI	CTGGAG	1 cut(s)	741
HaeIII	GGCC	3 cut(s)	290, 927, 1232
HapII	CCGG	4 cut(s)	121, 525, 964, 1374
HgaI	GACGC	3 cut(s)	155, 1238, 1316
HhaI	GCGC	1 cut(s)	682
Hin1I	GRCGYC	1 cut(s)	147
Hin1II	CATG	8 cut(s)	49, 424, 428, 566, 605, 686, 704, 911
Hin6I	GCGC	1 cut(s)	680
HinP1I	GCGC	1 cut(s)	680
HincII	GTYRAC	1 cut(s)	775
HindII	GTYRAC	1 cut(s)	775
HinfI	GANTC	9 cut(s)	15, 69, 131, 367, 539, 731, 743, 1046, 1295
HpaII	CCGG	4 cut(s)	121, 525, 964, 1374
HphI	GGTGA	4 cut(s)	16, 539, 548, 837
Hpy166II	GTNNAC	3 cut(s)	775, 797, 1444
Hpy188I	TCNGA	8 cut(s)	217, 372, 465, 736, 748, 1014, 1113, 1138
Hpy188III	TCNNGA	5 cut(s)	301, 338, 638, 1059, 1088
Hpy8I	GTNNAC	3 cut(s)	775, 797, 1444
Hpy99I	CGWCG	4 cut(s)	149, 289, 1142, 1254
HpyAV	CCTTC	4 cut(s)	310, 527, 847, 1118
HpyCH4III	ACNGT	3 cut(s)	766, 843, 1459
HpyCH4IV	ACGT	2 cut(s)	486, 816
HpyF10VI	GCNNNNNNNGC	5 cut(s)	387, 722, 1187, 1238, 1370
HpyF3I	CTNAG	4 cut(s)	195, 889, 1011, 1186
HpySE526I	ACGT	2 cut(s)	486, 816
Hsp92I	GRCGYC	1 cut(s)	147
Hsp92II	CATG	8 cut(s)	49, 424, 428, 566, 605, 686, 704, 911
HspAI	GCGC	1 cut(s)	680
KroI	GCCGGC	1 cut(s)	1373
KroNI	GCCGGC	1 cut(s)	1375
Ksp22I	TGATCA	1 cut(s)	93
Kzo9I	GATC	4 cut(s)	93, 334, 966, 1018
LguI	GCTCTTC	2 cut(s)	81, 299
LmnI	GCTCC	2 cut(s)	123, 722
Lsp1109I	GCAGC	4 cut(s)	967, 1228, 1231, 1243
LweI	GCATC	2 cut(s)	1064, 1087
MaeI	CTAG	4 cut(s)	543, 849, 1463, 1522
MaeII	ACGT	2 cut(s)	486, 816
MaeIII	GTNAC	5 cut(s)	48, 395, 482, 843, 959
MalI	GATC	4 cut(s)	95, 336, 968, 1020
MboI	GATC	4 cut(s)	93, 334, 966, 1018
MfeI	CAATTG	1 cut(s)	1378
MflI	RGATCY	1 cut(s)	966
MhlI	GDGCHC	3 cut(s)	183, 311, 1183
MluCI	AATT	7 cut(s)	188, 246, 348, 405, 547, 1208, 1378
MmeI	TCCRAC	2 cut(s)	195, 1161
Mph1103I	ATGCAT	2 cut(s)	426, 603
MroNI	GCCGGC	1 cut(s)	1373
MroXI	GAANNNNTTC	2 cut(s)	130, 1168
MseI	TTAA	6 cut(s)	821, 863, 971, 1068, 1116, 1424
MspI	CCGG	4 cut(s)	121, 525, 964, 1374
MspR9I	CCNGG	6 cut(s)	122, 184, 720, 935, 1194, 1405
MunI	CAATTG	1 cut(s)	1378
MvaI	CCWGG	5 cut(s)	184, 720, 935, 1194, 1405
MvnI	CGCG	1 cut(s)	390
MwoI	GCNNNNNNNGC	5 cut(s)	387, 722, 1187, 1238, 1370
NaeI	GCCGGC	1 cut(s)	1375
NciI	CCSGG	1 cut(s)	122
NcoI	CCATGG	1 cut(s)	700
NdeI	CATATG	1 cut(s)	657
NdeII	GATC	4 cut(s)	93, 334, 966, 1018
NgoMIV	GCCGGC	1 cut(s)	1373
NlaIII	CATG	8 cut(s)	49, 424, 428, 566, 605, 686, 704, 911
NmuCI	GTSAC	1 cut(s)	843
NsbI	TGCGCA	1 cut(s)	681
NsiI	ATGCAT	2 cut(s)	426, 603
NspI	RCATGY	3 cut(s)	49, 605, 911
PasI	CCCWGGG	2 cut(s)	183, 934
PciSI	GCTCTTC	2 cut(s)	81, 299
PdiI	GCCGGC	1 cut(s)	1375
PdmI	GAANNNNTTC	2 cut(s)	130, 1168
PfeI	GAWTC	9 cut(s)	15, 69, 131, 367, 539, 731, 743, 1046, 1295
PinAI	ACCGGT	1 cut(s)	524
PkrI	GCNGC	4 cut(s)	982, 1221, 1243, 1258
Ppu21I	YACGTR	1 cut(s)	487
PsiI	TTATAA	1 cut(s)	1289
Psp6I	CCWGG	5 cut(s)	182, 718, 933, 1192, 1403
PspGI	CCWGG	5 cut(s)	182, 718, 933, 1192, 1403
PspPI	GGNCC	1 cut(s)	925
PstI	CTGCAG	1 cut(s)	1246
PsuI	RGATCY	1 cut(s)	966
RsaI	GTAC	2 cut(s)	230, 903
RsaNI	GTAC	2 cut(s)	229, 902
SapI	GCTCTTC	2 cut(s)	81, 299
SaqAI	TTAA	6 cut(s)	821, 863, 971, 1068, 1116, 1424
SatI	GCNGC	4 cut(s)	981, 1220, 1242, 1257
Sau3AI	GATC	4 cut(s)	93, 334, 966, 1018
Sau96I	GGNCC	1 cut(s)	925
ScrFI	CCNGG	6 cut(s)	122, 184, 720, 935, 1194, 1405
SduI	GDGCHC	3 cut(s)	183, 311, 1183
SfaNI	GCATC	2 cut(s)	1064, 1087
SfcI	CTRYAG	1 cut(s)	1242
SnaBI	TACGTA	1 cut(s)	487
Sse9I	AATT	7 cut(s)	188, 246, 348, 405, 547, 1208, 1378
SsiI	CCGC	6 cut(s)	19, 390, 939, 953, 1316, 1371
SspMI	CTAG	4 cut(s)	543, 849, 1463, 1522
StyD4I	CCNGG	6 cut(s)	120, 182, 718, 933, 1192, 1403
StyI	CCWWGG	3 cut(s)	382, 700, 848
TaaI	ACNGT	3 cut(s)	766, 843, 1459
TaiI	ACGT	2 cut(s)	489, 819
TaqI	TCGA	2 cut(s)	337, 1252
TasI	AATT	7 cut(s)	188, 246, 348, 405, 547, 1208, 1378
TatI	WGTACW	1 cut(s)	901
TfiI	GAWTC	9 cut(s)	15, 69, 131, 367, 539, 731, 743, 1046, 1295
Tru1I	TTAA	6 cut(s)	821, 863, 971, 1068, 1116, 1424
Tru9I	TTAA	6 cut(s)	821, 863, 971, 1068, 1116, 1424
TscAI	CASTG	6 cut(s)	210, 316, 656, 799, 1042, 1520
TseFI	GTSAC	1 cut(s)	843
TseI	GCWGC	4 cut(s)	980, 1219, 1241, 1256
Tsp45I	GTSAC	1 cut(s)	843
TspDTI	ATGAA	7 cut(s)	237, 546, 744, 933, 1056, 1221, 1387
TspGWI	ACGGA	2 cut(s)	143, 527
TspRI	CASTG	6 cut(s)	210, 316, 656, 799, 1042, 1520
XceI	RCATGY	3 cut(s)	49, 605, 911
XcmI	CCANNNNNNNNNTGG	1 cut(s)	411
XmaJI	CCTAGG	1 cut(s)	848
XmiI	GTMKAC	1 cut(s)	1443
XmnI	GAANNNNTTC	2 cut(s)	130, 1168
XspI	CTAG	4 cut(s)	543, 849, 1463, 1522
Zsp2I	ATGCAT	2 cut(s)	426, 603

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.