Rorug01G0290700
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000197
Physical Location & Seq
Forward (+)
40640607 .. 40644549
3943 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0290700.1

Sequence Viewer

Length: 1647 bp
ATGGCTGGACGTAGGCTTTCCATGTTGAAGTCACTTTGCAAGTCTACCAATTGCTCTCTCAACCCAATGTCGTTTCAGTTGTCTAGTTCTTATGGGAAATTTGTGAGCTATGCTGATTCAGTTCTTGTAAGACCATCGTATGCTTTTGTGAATCGTGGTTACCATACGAAGGAAACAGAATCCCATAAAACTTTTGCGAATACTCAGATTAAAGCACTGTGTTCTGGATCACTTGTTAATACACGATGTTACGGAACCAAACATATTACAGCATTTTCACCCACATTGTCAAGTTCACTTAGTAGGTGTGCTTTTCCTCCTGTTTCGATAAGCCCAATTCTGGGTTGCTGTTCATACTCATCATTTTTCGGTAGCAGTGCTGATAAAGATGGGCAACCTGGAGTTTGGGCTGTTTCCAGTGGCAGTGAAGTGGATGTTGGTAATAGTGGCGTTGGTGGAAGTGATTTGGTTGATAAGGTTAAGGAATTCGTGCAGAGTGCTGCAGATGCGGTAACTCATACCGGGCAGAAGGCTAAAGAAGCATCTAGTGAAATGTCCCCTTATGTTCAGCAATTGTTGGATACATATCCACATCTTAGAAATGTGGTTACTCCAGTTGGTTGTACTTTGGCAGGTACTATATTTGCTTGGCTAGTGATGCCTAGGCTTTTCAGGAGGTTTCACAAGTACGCAAGTCTAGGCCGCACTGCTTTACTATCTGGAAGCCTTGAGGAGCAAGTTCCATATGAGAAAAGTTTTTGGGGTGCTTTGGAGGATCCAGTGCGATACCTATTTACTTTTATGGCATTTTCACAAATTGGCACAATGGTTGCACCAACTGCTATAGCTGCTCAATATCTTGCACCAGCTTGGAGAGGTGCAGCTATCATTTCATTTGTTTGGTTTCTATATCGGTGGAAGACAAATGTGTATACTCGTGCATTAGCAACTAAAAGTTTGCCCAGCAGTCTTGATCGGGAGAAGTTGTTAGCTCTAGACAAAATTTCGTCTGTTGGTCTATTTATGATTGGGATAATGGCTCTAGCTGAGGCATGTGGGGTGGCTGTGCAATCTATTATGACTGTTGGTGGCATAGGAGGAGTTGCTACTGCTTTTGCTGCTAGAGATGTCCTTGGCAATGTGCTGAGTGGTTTATCTATGCAGTTTACAAAGCCCTTTTCGCTAGGTGATACAATAAAGGCTGGATCCATAGAAGGTCAAGTGGTGGATATGGGACTTACAACCACTTCATTACTGAATGCCGAGAAGTTCCCAGTGATAGTTCCCAATTCACTCTTTTCTAGTCAGGTGATTGTGAACAAGTCACGTGCTCAATGGCGTGGCATCGTCACCAGAATTCCCCTGCAAATCAATGATGATTTGGATAAGGTTCCCCAGATATCAGATGATATAAAAAGCATGCTTAGATCTCACCCGAAGGTTTTCTTGGGAAAGGAGGTGCCTTATTGTTTCCTTTCTCGTCTAGAGAGCTCATTTGGAGAATTGACTCTTGGATGTAACCTCAAACAGATGAGCAAGGATGAGTTATTCTCTACAGAAGAAGATATCCTTTTGCAGTCGGTCAAGATAATTAAGGGGCATGGTGCCAAGTTGGGCAGCACCTATGGTGATATGACCACTCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

548

Amino Acids

59.36

Weight (kDa)

9.01

Isoelectric Point (pI)

37.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MS_channel_2nd PF00924 376 - 443 3.8e-16 Mechanosensitive ion channel, beta-domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000197)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18010 FvH4_7g18010 FvH4_7g18021 FvH4_7g18070 FvH4_7g18070 FvH4_7g18200 FvH4_7g18250
malus_domestica MD01G1092200.v1.1 MD01G1092500.v1.1 MD01G1092600.v1.1 MD01G1092900.v1.1 MD01G1093000.v1.1 MD01G1093200.v1.1 MD01G1093500.v1.1 MD01G1093700.v1.1 MD01G1093800.v1.1 MD01G1093900.v1.1 MD01G1094000.v1.1 MD01G1094200.v1.1 MD01G1094400.v1.1 MD01G1094500.v1.1 MD01G1094700.v1.1 MD01G1094800.v1.1 MD01G1095100.v1.1 MD07G1162700.v1.1 MD07G1163200.v1.1 MD07G1163400.v1.1 MD07G1163700.v1.1 MD07G1164000.v1.1 MD10G1186100.v1.1
prunus_persica Prupe.2G201200_v2.0.a1 Prupe.2G201200_v2.0.a1 Prupe.2G201300_v2.0.a1 Prupe.2G201800_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202800_v2.0.a1 Prupe.2G202900_v2.0.a1 Prupe.2G203000_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204900_v2.0.a1
pyrus_communis pycom01g11610 pycom01g11650 pycom01g11670 pycom01g11680 pycom01g11700 pycom01g11710 pycom01g11720 pycom01g11730 pycom07g15770 pycom07g15860 pycom07g15870 pycom07g15890 pycom07g15900 pycom07g15920
rosa_chinensis RchiOBHm_Chr1g0333731 RchiOBHm_Chr1g0361411 RchiOBHm_Chr1g0361501 RchiOBHm_Chr1g0361551 RchiOBHm_Chr1g0361631 RchiOBHm_Chr1g0361691 RchiOBHm_Chr1g0361701
rosa_laevigata RLG00000011640 RLG00000014882 RLG00000027709 RLG00000027713 RLG00000027717 RLG00000027719 RLG00000029532 RLG00000030171 RLG00000030174 RLG00000030177 RLG00000030181 RLG00000030186
rosa_multiflora Rmu_co8135790.1_g000001 Rmu_co8371689.1_g000001 Rmu_co8391943.1_g000001 Rmu_co8469521.1_g000001 Rmu_co8502503.1_g000002 Rmu_sc0001034.1_g000001 Rmu_sc0002119.1_g000002 Rmu_sc0002119.1_g000009 Rmu_sc0002119.1_g000019 Rmu_sc0003426.1_g000005 Rmu_sc0003693.1_g000010 Rmu_sc0003704.1_g000007 Rmu_sc0006101.1_g000005 Rmu_sc0006417.1_g000006 Rmu_sc0007217.1_g000012 Rmu_sc0010384.1_g000001 Rmu_sc0011258.1_g000003 Rmu_sc0017253.1_g000002 Rmu_ssc0000062.1_g000022
rosa_roxburghii Rroxscaffold_159G00432930 Rroxscaffold_159G00433040 Rroxscaffold_159G00433060 Rroxscaffold_4G00294780 Rroxscaffold_4G00294810 Rroxscaffold_4G00294870 Rroxscaffold_4G00294930 Rroxscaffold_4G00294950 Rroxscaffold_4G00317240 Rroxscaffold_4G00325190 Rroxscaffold_4G00325210
rosa_rugosa Rorug01G0047400 Rorug01G0047800 Rorug01G0048100 Rorug01G0048100 Rorug01G0111500 Rorug01G0111500 Rorug01G0289800 Rorug01G0290300 Rorug01G0290700 Rorug01G0290900
rosa_samantha Rh1AG063000 Rh1AG064000 Rh1AG064400 Rh1AG133700 Rh1AG300300 Rh1AG300900 Rh1AG301000 Rh1AG301100 Rh1BG263800 Rh1BG264000 Rh1BG264100 Rh1CG281800 Rh1CG282100 Rh1CG282200 Rh1DG294000 Rh1DG294100 Rh5BG200600
rosa_wichuraiana Rw1G005400 Rw1G011170 Rw1G026570 Rw1G026580 Rw1G026610 Rw1G026640 Rw1G026670 Rw1G026700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 623
AccB1I GGYRCC 2 cut(s) 1459, 1604
AccI GTMKAC 2 cut(s) 44, 932
AciI CCGC 2 cut(s) 509, 703
AclWI GGATC 5 cut(s) 235, 770, 783, 1200, 1213
AcsI RAATTY 4 cut(s) 98, 485, 1002, 1356
AcvI CACGTG 1 cut(s) 1328
AfaI GTAC 3 cut(s) 625, 637, 689
AfiI CCNNNNNNNGG 3 cut(s) 169, 340, 341
AgsI TTSAA 1 cut(s) 28
AjnI CCWGG 1 cut(s) 397
AjuI GAANNNNNNNTTGG 6 cut(s) 420, 452, 1430, 1462, 1494, 1526
AluBI AGCT 7 cut(s) 108, 848, 869, 884, 992, 1046, 1491
AluI AGCT 7 cut(s) 108, 848, 869, 884, 992, 1046, 1491
Alw21I GWGCWC 2 cut(s) 1333, 1493
AlwI GGATC 5 cut(s) 235, 770, 783, 1200, 1213
AoxI GGCC 1 cut(s) 700
ApeKI GCWGC 5 cut(s) 500, 848, 881, 1118, 1617
ApoI RAATTY 4 cut(s) 98, 485, 1002, 1356
Asp700I GAANNNNTTC 1 cut(s) 1442
AspA2I CCTAGG 1 cut(s) 662
AsuC2I CCSGG 1 cut(s) 523
AsuHPI GGTGA 6 cut(s) 270, 1199, 1321, 1342, 1424, 1640
AvrII CCTAGG 1 cut(s) 662
BamHI GGATCC 2 cut(s) 775, 1205
BanI GGYRCC 2 cut(s) 1459, 1604
BanII GRGCYC 1 cut(s) 1493
BauI CACGAG 1 cut(s) 936
BbrPI CACGTG 1 cut(s) 1328
BbsI GAAGAC 1 cut(s) 926
Bbv12I GWGCWC 2 cut(s) 1333, 1493
BbvCI CCTCAGC 1 cut(s) 1047
BbvI GCAGC 5 cut(s) 487, 835, 893, 1105, 1629
BccI CCATC 2 cut(s) 142, 383
BciT130I CCWGG 1 cut(s) 399
BciVI GTATCC 1 cut(s) 574
BcnI CCSGG 1 cut(s) 523
BfmI CTRYAG 3 cut(s) 501, 843, 1554
BfuAI ACCTGC 1 cut(s) 623
BfuI GTATCC 1 cut(s) 574
BglII AGATCT 1 cut(s) 1427
BisI GCNGC 6 cut(s) 501, 703, 849, 882, 1119, 1618
BlnI CCTAGG 1 cut(s) 662
BlsI GCNGC 6 cut(s) 502, 704, 850, 883, 1120, 1619
Bme1390I CCNGG 2 cut(s) 399, 523
BmiI GGNNCC 6 cut(s) 256, 777, 1207, 1392, 1461, 1606
BmrFI CCNGG 2 cut(s) 399, 523
BmrI ACTGGG 1 cut(s) 1268
BmsI GCATC 4 cut(s) 496, 551, 648, 1353
BmuI ACTGGG 1 cut(s) 1268
BpiI GAAGAC 1 cut(s) 926
BplI GAGNNNNNCTC 2 cut(s) 1535, 1567
BpmI CTGGAG 2 cut(s) 420, 597
Bpu10I CCTNAGC 1 cut(s) 1047
BpuEI CTTGAG 1 cut(s) 749
BpuMI CCSGG 1 cut(s) 523
BsaAI YACGTR 1 cut(s) 1328
BsaBI GATNNNNATC 1 cut(s) 585
BsaJI CCNNGG 2 cut(s) 662, 1132
BsaXI ACNNNNNCTCC 2 cut(s) 971, 1001
Bsc4I CCNNNNNNNGG 3 cut(s) 169, 340, 341
Bse1I ACTGG 4 cut(s) 417, 614, 779, 1274
Bse3DI GCAATG 1 cut(s) 1144
Bse8I GATNNNNATC 1 cut(s) 585
BseBI CCWGG 1 cut(s) 399
BseDI CCNNGG 2 cut(s) 662, 1132
BseGI GGATG 3 cut(s) 439, 1520, 1546
BseJI GATNNNNATC 1 cut(s) 585
BseLI CCNNNNNNNGG 3 cut(s) 169, 340, 341
BseMI GCAATG 1 cut(s) 1144
BseMII CTCAG 3 cut(s) 218, 1038, 1136
BseNI ACTGG 4 cut(s) 417, 614, 779, 1274
BseRI GAGGAG 2 cut(s) 746, 1113
BseXI GCAGC 5 cut(s) 487, 835, 893, 1105, 1629
BseYI CCCAGC 1 cut(s) 962
BsgI GTGCAG 2 cut(s) 512, 900
BshFI GGCC 1 cut(s) 702
BshNI GGYRCC 2 cut(s) 1459, 1604
BsiHKAI GWGCWC 2 cut(s) 1333, 1493
BsiSI CCGG 1 cut(s) 522
BslFI GGGAC 2 cut(s) 541, 1248
BslI CCNNNNNNNGG 3 cut(s) 169, 340, 341
BsmFI GGGAC 2 cut(s) 541, 1248
BsmI GAATGC 1 cut(s) 1264
BsnI GGCC 1 cut(s) 702
Bsp1286I GDGCHC 2 cut(s) 1333, 1493
Bsp143I GATC 5 cut(s) 227, 775, 973, 1205, 1427
BspACI CCGC 2 cut(s) 509, 703
BspANI GGCC 1 cut(s) 702
BspCNI CTCAG 3 cut(s) 217, 1039, 1137
BspLI GGNNCC 6 cut(s) 256, 777, 1207, 1392, 1461, 1606
BspMAI CTGCAG 1 cut(s) 505
BspMI ACCTGC 1 cut(s) 623
BspPI GGATC 5 cut(s) 235, 770, 783, 1200, 1213
BspT107I GGYRCC 2 cut(s) 1459, 1604
BsrDI GCAATG 1 cut(s) 1144
BsrI ACTGG 4 cut(s) 417, 614, 779, 1274
BssECI CCNNGG 2 cut(s) 662, 1132
BssMI GATC 5 cut(s) 227, 775, 973, 1205, 1427
BssNAI GTATAC 1 cut(s) 933
BssSI CACGAG 1 cut(s) 936
BssT1I CCWWGG 2 cut(s) 662, 1132
Bst1107I GTATAC 1 cut(s) 933
Bst2BI CACGAG 1 cut(s) 936
Bst2UI CCWGG 1 cut(s) 399
Bst4CI ACNGT 2 cut(s) 219, 1084
BstAPI GCANNNNNTGC 1 cut(s) 839
BstBAI YACGTR 1 cut(s) 1328
BstC8I GCNNGC 1 cut(s) 1421
BstDEI CTNAG 6 cut(s) 204, 299, 596, 1047, 1145, 1424
BstEII GGTNACC 1 cut(s) 158
BstF5I GGATG 3 cut(s) 439, 1520, 1546
BstKTI GATC 5 cut(s) 230, 778, 976, 1208, 1430
BstMBI GATC 5 cut(s) 227, 775, 973, 1205, 1427
BstMWI GCNNNNNNNGC 7 cut(s) 506, 539, 658, 839, 848, 1118, 1180
BstNI CCWGG 1 cut(s) 399
BstNSI RCATGY 2 cut(s) 1056, 1423
BstPI GGTNACC 1 cut(s) 158
BstSCI CCNGG 2 cut(s) 397, 521
BstSFI CTRYAG 3 cut(s) 501, 843, 1554
BstV1I GCAGC 5 cut(s) 487, 835, 893, 1105, 1629
BstV2I GAAGAC 1 cut(s) 926
BstX2I RGATCY 3 cut(s) 775, 1205, 1427
BstYI RGATCY 3 cut(s) 775, 1205, 1427
BstZ17I GTATAC 1 cut(s) 933
BsuI GTATCC 1 cut(s) 574
BsuRI GGCC 1 cut(s) 702
BtsCI GGATG 3 cut(s) 439, 1520, 1546
BtsI GCAGTG 3 cut(s) 382, 430, 705
BtsIMutI CAGTG 7 cut(s) 215, 382, 424, 430, 705, 786, 1281
BveI ACCTGC 1 cut(s) 623
Cac8I GCNNGC 1 cut(s) 1421
Csp6I GTAC 3 cut(s) 624, 636, 688
CviAII CATG 4 cut(s) 22, 1053, 1420, 1601
CviQI GTAC 3 cut(s) 624, 636, 688
DdeI CTNAG 6 cut(s) 204, 299, 596, 1047, 1145, 1424
DpnI GATC 5 cut(s) 229, 777, 975, 1207, 1429
DpnII GATC 5 cut(s) 227, 775, 973, 1205, 1427
Ecl136II GAGCTC 1 cut(s) 1491
Eco130I CCWWGG 2 cut(s) 662, 1132
Eco24I GRGCYC 1 cut(s) 1493
Eco32I GATATC 2 cut(s) 1401, 1567
Eco53kI GAGCTC 1 cut(s) 1491
Eco72I CACGTG 1 cut(s) 1328
Eco91I GGTNACC 1 cut(s) 158
EcoICRI GAGCTC 1 cut(s) 1491
EcoO65I GGTNACC 1 cut(s) 158
EcoRI GAATTC 2 cut(s) 485, 1356
EcoRII CCWGG 1 cut(s) 397
EcoRV GATATC 2 cut(s) 1401, 1567
EcoT14I CCWWGG 2 cut(s) 662, 1132
EcoT38I GRGCYC 1 cut(s) 1493
ErhI CCWWGG 2 cut(s) 662, 1132
FaeI CATG 4 cut(s) 25, 1056, 1423, 1604
FalI AAGNNNNNCTT 4 cut(s) 1430, 1462, 1554, 1586
FaqI GGGAC 2 cut(s) 541, 1248
FatI CATG 4 cut(s) 21, 1052, 1419, 1600
FauNDI CATATG 1 cut(s) 745
FblI GTMKAC 2 cut(s) 44, 932
Fnu4HI GCNGC 6 cut(s) 501, 703, 849, 882, 1119, 1618
FokI GGATG 3 cut(s) 446, 1527, 1553
FriOI GRGCYC 1 cut(s) 1493
Fsp4HI GCNGC 6 cut(s) 501, 703, 849, 882, 1119, 1618
GluI GCNGC 6 cut(s) 501, 703, 849, 882, 1119, 1618
GsaI CCCAGC 1 cut(s) 966
GsuI CTGGAG 2 cut(s) 420, 597
HaeIII GGCC 1 cut(s) 702
HapII CCGG 1 cut(s) 522
Hin1II CATG 4 cut(s) 25, 1056, 1423, 1604
HinfI GANTC 4 cut(s) 116, 151, 179, 1507
HpaII CCGG 1 cut(s) 522
HphI GGTGA 6 cut(s) 270, 1199, 1321, 1342, 1424, 1640
Hpy166II GTNNAC 5 cut(s) 45, 296, 933, 1167, 1318
Hpy188I TCNGA 2 cut(s) 207, 1405
Hpy188III TCNNGA 8 cut(s) 225, 673, 720, 971, 977, 995, 1484, 1585
Hpy8I GTNNAC 5 cut(s) 45, 296, 933, 1167, 1318
HpyAV CCTTC 4 cut(s) 163, 523, 1208, 1432
HpyCH4III ACNGT 2 cut(s) 219, 1084
HpyCH4IV ACGT 2 cut(s) 10, 1327
HpyF10VI GCNNNNNNNGC 7 cut(s) 506, 539, 658, 839, 848, 1118, 1180
HpyF3I CTNAG 6 cut(s) 204, 299, 596, 1047, 1145, 1424
HpySE526I ACGT 2 cut(s) 10, 1327
Hsp92II CATG 4 cut(s) 25, 1056, 1423, 1604
Kzo9I GATC 5 cut(s) 227, 775, 973, 1205, 1427
LmnI GCTCC 1 cut(s) 733
Lsp1109I GCAGC 5 cut(s) 487, 835, 893, 1105, 1629
LweI GCATC 4 cut(s) 496, 551, 648, 1353
MaeII ACGT 2 cut(s) 10, 1327
MaeIII GTNAC 8 cut(s) 30, 158, 248, 511, 607, 1323, 1348, 1517
MalI GATC 5 cut(s) 229, 777, 975, 1207, 1429
MboI GATC 5 cut(s) 227, 775, 973, 1205, 1427
MboII GAAGA 3 cut(s) 931, 1571, 1574
MfeI CAATTG 2 cut(s) 49, 572
MflI RGATCY 3 cut(s) 775, 1205, 1427
MhlI GDGCHC 2 cut(s) 1333, 1493
MlyI GAGTC 1 cut(s) 1501
MmeI TCCRAC 1 cut(s) 558
MnlI CCTC 9 cut(s) 327, 669, 724, 766, 869, 1042, 1091, 1450, 1532
MroXI GAANNNNTTC 1 cut(s) 1442
MseI TTAA 4 cut(s) 210, 237, 480, 1593
MspI CCGG 1 cut(s) 522
MspR9I CCNGG 2 cut(s) 399, 523
MunI CAATTG 2 cut(s) 49, 572
Mva1269I GAATGC 1 cut(s) 1264
MvaI CCWGG 1 cut(s) 399
MwoI GCNNNNNNNGC 7 cut(s) 506, 539, 658, 839, 848, 1118, 1180
NciI CCSGG 1 cut(s) 523
NdeI CATATG 1 cut(s) 745
NdeII GATC 5 cut(s) 227, 775, 973, 1205, 1427
NlaIII CATG 4 cut(s) 25, 1056, 1423, 1604
NlaIV GGNNCC 6 cut(s) 256, 777, 1207, 1392, 1461, 1606
NmeAIII GCCGAG 1 cut(s) 1288
NmuCI GTSAC 3 cut(s) 30, 1323, 1348
NspI RCATGY 2 cut(s) 1056, 1423
PaeI GCATGC 1 cut(s) 1423
PctI GAATGC 1 cut(s) 1264
PdmI GAANNNNTTC 1 cut(s) 1442
PfeI GAWTC 3 cut(s) 116, 151, 179
PkrI GCNGC 6 cut(s) 502, 704, 850, 883, 1120, 1619
PleI GAGTC 1 cut(s) 1501
PmaCI CACGTG 1 cut(s) 1328
PmlI CACGTG 1 cut(s) 1328
PpsI GAGTC 1 cut(s) 1501
Ppu21I YACGTR 1 cut(s) 1328
Psp124BI GAGCTC 1 cut(s) 1493
Psp6I CCWGG 1 cut(s) 397
PspCI CACGTG 1 cut(s) 1328
PspEI GGTNACC 1 cut(s) 158
PspFI CCCAGC 1 cut(s) 962
PspGI CCWGG 1 cut(s) 397
PspN4I GGNNCC 6 cut(s) 256, 777, 1207, 1392, 1461, 1606
PstI CTGCAG 1 cut(s) 505
PsuI RGATCY 3 cut(s) 775, 1205, 1427
RsaI GTAC 3 cut(s) 625, 637, 689
RsaNI GTAC 3 cut(s) 624, 636, 688
SacI GAGCTC 1 cut(s) 1493
SaqAI TTAA 4 cut(s) 210, 237, 480, 1593
SatI GCNGC 6 cut(s) 501, 703, 849, 882, 1119, 1618
Sau3AI GATC 5 cut(s) 227, 775, 973, 1205, 1427
SchI GAGTC 1 cut(s) 1501
ScrFI CCNGG 2 cut(s) 399, 523
SduI GDGCHC 2 cut(s) 1333, 1493
SfaNI GCATC 4 cut(s) 496, 551, 648, 1353
SfcI CTRYAG 3 cut(s) 501, 843, 1554
SmlI CTYRAG 1 cut(s) 728
SmoI CTYRAG 1 cut(s) 728
SphI GCATGC 1 cut(s) 1423
SsiI CCGC 2 cut(s) 509, 703
SstI GAGCTC 1 cut(s) 1493
StyD4I CCNGG 2 cut(s) 397, 521
StyI CCWWGG 2 cut(s) 662, 1132
TaaI ACNGT 2 cut(s) 219, 1084
TaiI ACGT 2 cut(s) 13, 1330
TaqI TCGA 1 cut(s) 326
TaqII GACCGA 1 cut(s) 1570
TatI WGTACW 1 cut(s) 623
TauI GCSGC 1 cut(s) 705
TfiI GAWTC 3 cut(s) 116, 151, 179
Tru1I TTAA 4 cut(s) 210, 237, 480, 1593
Tru9I TTAA 4 cut(s) 210, 237, 480, 1593
TscAI CASTG 7 cut(s) 222, 382, 424, 430, 712, 786, 1281
TseFI GTSAC 3 cut(s) 30, 1323, 1348
TseI GCWGC 5 cut(s) 500, 848, 881, 1118, 1617
Tsp45I GTSAC 3 cut(s) 30, 1323, 1348
TspDTI ATGAA 3 cut(s) 342, 882, 1239
TspGWI ACGGA 1 cut(s) 267
TspRI CASTG 7 cut(s) 222, 382, 424, 430, 712, 786, 1281
XapI RAATTY 4 cut(s) 98, 485, 1002, 1356
XbaI TCTAGA 2 cut(s) 994, 1483
XceI RCATGY 2 cut(s) 1056, 1423
XmaJI CCTAGG 1 cut(s) 662
XmiI GTMKAC 2 cut(s) 44, 932
XmnI GAANNNNTTC 1 cut(s) 1442
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.