Prupe.2G201200_v2.0.a1
NAC Family

(NAC) domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000197
Physical Location & Seq
Reverse (-)
23790709 .. 23797562
6854 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G201200.1

Sequence Viewer

Length: 2124 bp
ATGGCCATGGCTGCTGATGCTGCTGCTGACAAGGCAGCGCCTGCACTGCCGCCGCTCACAGTGAAATTGGATCCTACAAAGTACCCCCTTTGGTTGGCGCAGATCATTCCTCTCCTCAAAAGCAAAGGCCTGATGTCTTTCGTCGACGGTACCGCCATGTGTCCTCCCGCCTTTCTTCTCGACCCCGACGGGAAACCCACCAACACGACCCATCCCGATTATGACCACTGGATTCAGATGGACCAGTTTGTGCTTTCTTTGATCAATGGCTCCCTCAGCCACTTAGTTGTTGCTACTCTGGAGGGTTCTATCTCCGCCCGTGCTACCTGGGTTGCTTTAGAGGCTCTGCTTCTTGGTGCTGAGCAGCAGGTTCCGACTCCGACGGTCTCGGTTTCTGATCATAGCACCGCTGCCGCGGCGGCTTCTCCTGGCTGTGGCTTTGATCATGTTGCTTCCGGAGGCGGCGGAGGCGGCGGAGGCGGCGGAGGCGGCGGAGGCGGCGGAGGCGGCGGCACAACAGGTGAAGGCGTTTCAGGGAAGAAAGGCCTACCCGGGGTTAAGTTATTCTCTCCCACCGATGAGCAACTGGTTGGCTACTTGACGAACCAAATAGAGGGGAAGGACTCGGAATTCAGGGACTCGATCCCTGTAATTGATCATGCCTGCAAGCGTGAGCCTCGTGATCTGCCTGCGGTCTTCTTCAGCAAACCTGATTACAAGAACTCCAAAAGAGATCGCTGCAACAGGACCACAGATGAGGGTTTTTATAAAAGCACAGGCAAGGTTCGTGAGATCAAGGCTGAACAATCCCAAGCTGTGATTGGTAATAAGAGGATTTTGCCTTTCTGCGAAGGTCGTGGACCCCAAGCCAAGAAGACCAAGTATGTCATGCATGAGTATTCTCTCACCAAAACTGAACTTGCCAAAATGGGTGTGGGTCCTAATCCCAATCAGCAGGAAGAGTTTGTTCTCTGCTGCCTGAAGAATAAGTCAGCAAATTCTAAGAAGCTGAAGGATGATTCAGTCTGCAGCAGTGAATTAGCTGAACTTGCTATTGGTGGCGAAATCGCCTCTAACTCTGAAGATGATCAAGCTGCTGCAACTGGTATGATTCAAGGCCCAGATGAGCATCTCGCAGACAAAGATGTTCTGCTTGGCACTGAGAATCGTAATGAATGCGTCGAGTCAGAGTCTCCAAATGGTTTTTCTTCCACAGACAATAATGATATTTCAACCTTTGTTGGTTCACCTGGTAGCTTTGATGTACCTGATGGCATCTTCTTGTCTGATTTTGATGATCCGATTAAAGAGCTGTCCTGTGCTGATCTTGGAGAAAATACGGATTCAACCTTTCTTCCACCTCAGCAGCTAGCAGCCACATCAGCCACCACACCCACATTAGCCACATCATTTGGCAGCTTTGGTGTTGGTTTACCTGATGACTTCTCGTGGCCTGATTTTGATGATCTGTTGAAAGAGCTGTCCTGTGCTGATCTTGGAGAAAATACGGATTCAACCCTTCTTCCACCTCAGCAGCTAGCAGCCACATCAGCCACCACACCCACATTAGCCACATCATTTGGCGGCTTTGGTGTTGGTTCACCTGATGGCTTCTCGTGGCCTGATTTTGATGATCTGTTGAAAGAGCCGTTCTGGGCTGATCAGCCACATCAGCCACCACACCCGCATCAGCCACCACCCGCATCTCAGCCACATCAGCCACCACCCGCACCTCAGTCACATCAGCCACCACCCCCATCTCAGCCACAGAATTACTGCTCCTCCACACTGCCGTCAGCATTATGCACCAAGCAAGGAAATGTTCCCAGTCTCTGTAATGATGACTGCAGTAAGCAGCTATCTCCAACTGGGAATAACATTTCAACTAATTATCACTACGAACCGGTTAGCAACACCGCTTATAGTGTTCAAAATGGGGCTACTGATGAAAGTTTTTCAGAGGTTTATAAAATTTCAACCAACGATCACAATGAATCAGTTAGTTCAGAGGCTTACTTTCAGCCAAAAGAAAATCTGGGCATTCTTTCATCCATTTCGGCCACAGGATTACACACTGCTGTCACCAAGGAACACAGAACTGGGAGATGTTATGCATGCCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

708

Amino Acids

74.8

Weight (kDa)

4.72

Isoelectric Point (pI)

45.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000197)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18010 FvH4_7g18010 FvH4_7g18021 FvH4_7g18070 FvH4_7g18070 FvH4_7g18200 FvH4_7g18250
malus_domestica MD01G1092200.v1.1 MD01G1092500.v1.1 MD01G1092600.v1.1 MD01G1092900.v1.1 MD01G1093000.v1.1 MD01G1093200.v1.1 MD01G1093500.v1.1 MD01G1093700.v1.1 MD01G1093800.v1.1 MD01G1093900.v1.1 MD01G1094000.v1.1 MD01G1094200.v1.1 MD01G1094400.v1.1 MD01G1094500.v1.1 MD01G1094700.v1.1 MD01G1094800.v1.1 MD01G1095100.v1.1 MD07G1162700.v1.1 MD07G1163200.v1.1 MD07G1163400.v1.1 MD07G1163700.v1.1 MD07G1164000.v1.1 MD10G1186100.v1.1
prunus_persica Prupe.2G201200_v2.0.a1 Prupe.2G201200_v2.0.a1 Prupe.2G201300_v2.0.a1 Prupe.2G201800_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202800_v2.0.a1 Prupe.2G202900_v2.0.a1 Prupe.2G203000_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204900_v2.0.a1
pyrus_communis pycom01g11610 pycom01g11650 pycom01g11670 pycom01g11680 pycom01g11700 pycom01g11710 pycom01g11720 pycom01g11730 pycom07g15770 pycom07g15860 pycom07g15870 pycom07g15890 pycom07g15900 pycom07g15920
rosa_chinensis RchiOBHm_Chr1g0333731 RchiOBHm_Chr1g0361411 RchiOBHm_Chr1g0361501 RchiOBHm_Chr1g0361551 RchiOBHm_Chr1g0361631 RchiOBHm_Chr1g0361691 RchiOBHm_Chr1g0361701
rosa_laevigata RLG00000011640 RLG00000014882 RLG00000027709 RLG00000027713 RLG00000027717 RLG00000027719 RLG00000029532 RLG00000030171 RLG00000030174 RLG00000030177 RLG00000030181 RLG00000030186
rosa_multiflora Rmu_co8135790.1_g000001 Rmu_co8371689.1_g000001 Rmu_co8391943.1_g000001 Rmu_co8469521.1_g000001 Rmu_co8502503.1_g000002 Rmu_sc0001034.1_g000001 Rmu_sc0002119.1_g000002 Rmu_sc0002119.1_g000009 Rmu_sc0002119.1_g000019 Rmu_sc0003426.1_g000005 Rmu_sc0003693.1_g000010 Rmu_sc0003704.1_g000007 Rmu_sc0006101.1_g000005 Rmu_sc0006417.1_g000006 Rmu_sc0007217.1_g000012 Rmu_sc0010384.1_g000001 Rmu_sc0011258.1_g000003 Rmu_sc0017253.1_g000002 Rmu_ssc0000062.1_g000022
rosa_roxburghii Rroxscaffold_159G00432930 Rroxscaffold_159G00433040 Rroxscaffold_159G00433060 Rroxscaffold_4G00294780 Rroxscaffold_4G00294810 Rroxscaffold_4G00294870 Rroxscaffold_4G00294930 Rroxscaffold_4G00294950 Rroxscaffold_4G00317240 Rroxscaffold_4G00325190 Rroxscaffold_4G00325210
rosa_rugosa Rorug01G0047400 Rorug01G0047800 Rorug01G0048100 Rorug01G0048100 Rorug01G0111500 Rorug01G0111500 Rorug01G0289800 Rorug01G0290300 Rorug01G0290700 Rorug01G0290900
rosa_samantha Rh1AG063000 Rh1AG064000 Rh1AG064400 Rh1AG133700 Rh1AG300300 Rh1AG300900 Rh1AG301000 Rh1AG301100 Rh1BG263800 Rh1BG264000 Rh1BG264100 Rh1CG281800 Rh1CG282100 Rh1CG282200 Rh1DG294000 Rh1DG294100 Rh5BG200600
rosa_wichuraiana Rw1G005400 Rw1G011170 Rw1G026570 Rw1G026580 Rw1G026610 Rw1G026640 Rw1G026670 Rw1G026700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 768, 1968
Acc36I ACCTGC 1 cut(s) 358
Acc65I GGTACC 1 cut(s) 149
AccB1I GGYRCC 1 cut(s) 149
AccBSI CCGCTC 1 cut(s) 55
AccI GTMKAC 1 cut(s) 144
AccII CGCG 1 cut(s) 416
AccIII TCCGGA 1 cut(s) 455
AclWI GGATC 4 cut(s) 65, 78, 637, 1292
AcoI YGGCCR 2 cut(s) 3, 2058
AcsI RAATTY 3 cut(s) 629, 997, 1971
AcuI CTGAAG 4 cut(s) 685, 1001, 1031, 1101
AfaI GTAC 3 cut(s) 83, 151, 1266
AfiI CCNNNNNNNGG 4 cut(s) 94, 434, 553, 613
AgeI ACCGGT 1 cut(s) 1903
AgsI TTSAA 9 cut(s) 1115, 1233, 1347, 1474, 1515, 1642, 1884, 1931, 1977
AjnI CCWGG 3 cut(s) 326, 427, 1249
AjuI GAANNNNNNNTTGG 4 cut(s) 1038, 1070, 1189, 1221
Alw26I GTCTC 3 cut(s) 391, 1197, 1835
AlwI GGATC 4 cut(s) 65, 78, 637, 1292
AlwNI CAGNNNCTG 2 cut(s) 41, 1833
Ama87I CYCGRG 1 cut(s) 551
Aor13HI TCCGGA 1 cut(s) 455
AoxI GGCC 7 cut(s) 3, 127, 544, 1117, 1451, 1619, 2058
ApoI RAATTY 3 cut(s) 629, 997, 1971
AsiGI ACCGGT 1 cut(s) 1903
Asp718I GGTACC 1 cut(s) 149
AspLEI GCGC 2 cut(s) 40, 100
AspS9I GGNCC 5 cut(s) 241, 747, 860, 938, 1118
AsuC2I CCSGG 2 cut(s) 552, 553
AsuHPI GGTGA 5 cut(s) 533, 898, 1239, 1593, 2074
AsuNHI GCTAGC 2 cut(s) 1369, 1537
AvaI CYCGRG 1 cut(s) 551
AvaII GGWCC 4 cut(s) 241, 747, 860, 938
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 70
BanI GGYRCC 1 cut(s) 149
BauI CACGAG 3 cut(s) 678, 1447, 1615
BbsI GAAGAC 2 cut(s) 688, 881
BbvCI CCTCAGC 3 cut(s) 275, 1362, 1530
BccI CCATC 5 cut(s) 219, 232, 1265, 1601, 1765
BceAI ACGGC 2 cut(s) 1633, 1777
BciT130I CCWGG 3 cut(s) 328, 429, 1251
BclI TGATCA 6 cut(s) 261, 397, 442, 655, 1087, 1660
BcnI CCSGG 2 cut(s) 552, 553
BcoDI GTCTC 3 cut(s) 391, 1197, 1835
BfaI CTAG 2 cut(s) 1370, 1538
BfmI CTRYAG 2 cut(s) 1027, 1846
BfoI RGCGCY 1 cut(s) 41
BfuAI ACCTGC 1 cut(s) 358
BglI GCCNNNNNGGC 1 cut(s) 419
BlpI GCTNAGC 1 cut(s) 360
Bme1390I CCNGG 5 cut(s) 328, 429, 552, 553, 1251
Bme18I GGWCC 4 cut(s) 241, 747, 860, 938
BmeT110I CYCGRG 1 cut(s) 551
BmgT120I GGNCC 5 cut(s) 241, 747, 860, 938, 1118
BmiI GGNNCC 6 cut(s) 72, 151, 271, 372, 862, 939
BmrFI CCNGG 5 cut(s) 328, 429, 552, 553, 1251
BmrI ACTGGG 3 cut(s) 1821, 1878, 2109
BmsI GCATC 5 cut(s) 7, 1138, 1284, 1696, 1712
BmtI GCTAGC 2 cut(s) 1373, 1541
BmuI ACTGGG 3 cut(s) 1821, 1878, 2109
BpiI GAAGAC 2 cut(s) 688, 881
BpmI CTGGAG 1 cut(s) 320
Bpu10I CCTNAGC 3 cut(s) 275, 1362, 1530
Bpu1102I GCTNAGC 1 cut(s) 360
BpuMI CCSGG 2 cut(s) 552, 553
BsaBI GATNNNNATC 1 cut(s) 1128
BsaI GGTCTC 1 cut(s) 391
BsaJI CCNNGG 6 cut(s) 6, 327, 414, 551, 552, 2085
BsaWI WCCGGW 2 cut(s) 455, 1903
BsaXI ACNNNNNCTCC 4 cut(s) 707, 737, 1766, 1796
Bsc4I CCNNNNNNNGG 4 cut(s) 94, 434, 553, 613
Bse118I RCCGGY 1 cut(s) 1903
Bse1I ACTGG 7 cut(s) 233, 244, 591, 1108, 1827, 1873, 2104
Bse8I GATNNNNATC 1 cut(s) 1128
BseAI TCCGGA 1 cut(s) 455
BseBI CCWGG 3 cut(s) 328, 429, 1251
BseDI CCNNGG 6 cut(s) 6, 327, 414, 551, 552, 2085
BseGI GGATG 3 cut(s) 211, 1021, 2048
BseJI GATNNNNATC 1 cut(s) 1128
BseLI CCNNNNNNNGG 4 cut(s) 94, 434, 553, 613
BseMII CTCAG 8 cut(s) 289, 351, 1152, 1376, 1544, 1721, 1748, 1775
BseNI ACTGG 7 cut(s) 233, 244, 591, 1108, 1827, 1873, 2104
BseRI GAGGAG 2 cut(s) 104, 1771
BsgI GTGCAG 1 cut(s) 27
Bsh1236I CGCG 1 cut(s) 416
BshFI GGCC 7 cut(s) 5, 129, 546, 1119, 1453, 1621, 2060
BshNI GGYRCC 1 cut(s) 149
BshTI ACCGGT 1 cut(s) 1903
BsiHKCI CYCGRG 1 cut(s) 551
BsiSI CCGG 3 cut(s) 456, 552, 1904
BslFI GGGAC 1 cut(s) 650
BslI CCNNNNNNNGG 4 cut(s) 94, 434, 553, 613
BsmAI GTCTC 3 cut(s) 391, 1197, 1835
BsmFI GGGAC 1 cut(s) 650
BsmI GAATGC 2 cut(s) 1181, 2040
BsnI GGCC 7 cut(s) 5, 129, 546, 1119, 1453, 1621, 2060
Bso31I GGTCTC 1 cut(s) 391
BsoBI CYCGRG 1 cut(s) 551
Bsp13I TCCGGA 1 cut(s) 455
Bsp1720I GCTNAGC 1 cut(s) 360
Bsp19I CCATGG 1 cut(s) 6
BspANI GGCC 7 cut(s) 5, 129, 546, 1119, 1453, 1621, 2060
BspCNI CTCAG 8 cut(s) 288, 352, 1153, 1375, 1543, 1720, 1747, 1774
BspEI TCCGGA 1 cut(s) 455
BspFNI CGCG 1 cut(s) 416
BspLI GGNNCC 6 cut(s) 72, 151, 271, 372, 862, 939
BspMAI CTGCAG 2 cut(s) 1031, 1850
BspMI ACCTGC 1 cut(s) 358
BspOI GCTAGC 2 cut(s) 1373, 1541
BspPI GGATC 4 cut(s) 65, 78, 637, 1292
BspT107I GGYRCC 1 cut(s) 149
BspTNI GGTCTC 1 cut(s) 391
BsrBI CCGCTC 1 cut(s) 55
BsrFI RCCGGY 1 cut(s) 1903
BsrI ACTGG 7 cut(s) 233, 244, 591, 1108, 1827, 1873, 2104
BssAI RCCGGY 1 cut(s) 1903
BssECI CCNNGG 6 cut(s) 6, 327, 414, 551, 552, 2085
BssSI CACGAG 3 cut(s) 678, 1447, 1615
BssT1I CCWWGG 2 cut(s) 6, 2085
Bst2BI CACGAG 3 cut(s) 678, 1447, 1615
Bst2UI CCWGG 3 cut(s) 328, 429, 1251
Bst4CI ACNGT 3 cut(s) 61, 149, 385
Bst6I CTCTTC 1 cut(s) 954
BstAPI GCANNNNNTGC 1 cut(s) 41
BstC8I GCNNGC 7 cut(s) 42, 664, 668, 690, 1371, 1539, 2116
BstDSI CCRYGG 2 cut(s) 6, 414
BstF5I GGATG 3 cut(s) 211, 1021, 2048
BstFNI CGCG 1 cut(s) 416
BstH2I RGCGCY 1 cut(s) 41
BstHHI GCGC 2 cut(s) 40, 100
BstMAI GTCTC 3 cut(s) 391, 1197, 1835
BstNI CCWGG 3 cut(s) 328, 429, 1251
BstNSI RCATGY 1 cut(s) 2118
BstSCI CCNGG 5 cut(s) 326, 427, 550, 551, 1249
BstSFI CTRYAG 2 cut(s) 1027, 1846
BstUI CGCG 1 cut(s) 416
BstV2I GAAGAC 2 cut(s) 688, 881
BstX2I RGATCY 1 cut(s) 70
BstYI RGATCY 1 cut(s) 70
BsuRI GGCC 7 cut(s) 5, 129, 546, 1119, 1453, 1621, 2060
BtgI CCRYGG 2 cut(s) 6, 414
BtsCI GGATG 3 cut(s) 211, 1021, 2048
BtsI GCAGTG 4 cut(s) 44, 1039, 1787, 2073
BtsIMutI CAGTG 7 cut(s) 44, 66, 226, 1039, 1158, 1787, 2073
BveI ACCTGC 1 cut(s) 358
Cac8I GCNNGC 7 cut(s) 42, 664, 668, 690, 1371, 1539, 2116
CaiI CAGNNNCTG 2 cut(s) 41, 1833
CfoI GCGC 2 cut(s) 40, 100
Cfr10I RCCGGY 1 cut(s) 1903
Cfr13I GGNCC 5 cut(s) 241, 747, 860, 938, 1118
Cfr42I CCGCGG 1 cut(s) 417
Cfr9I CCCGGG 1 cut(s) 551
CseI GACGC 1 cut(s) 1168
CsiI ACCWGGT 1 cut(s) 1249
Csp6I GTAC 3 cut(s) 82, 150, 1265
CspAI ACCGGT 1 cut(s) 1903
CspCI CAANNNNNGTGG 4 cut(s) 1393, 1428, 1561, 1596
CviAII CATG 7 cut(s) 7, 157, 446, 659, 889, 893, 2115
CviQI GTAC 3 cut(s) 82, 150, 1265
EaeI YGGCCR 2 cut(s) 3, 2058
Eam1104I CTCTTC 1 cut(s) 954
EarI CTCTTC 1 cut(s) 954
EciI GGCGGA 6 cut(s) 304, 480, 489, 498, 507, 516
Eco130I CCWWGG 2 cut(s) 6, 2085
Eco147I AGGCCT 2 cut(s) 129, 546
Eco31I GGTCTC 1 cut(s) 391
Eco47I GGWCC 4 cut(s) 241, 747, 860, 938
Eco57I CTGAAG 4 cut(s) 685, 1001, 1031, 1101
Eco88I CYCGRG 1 cut(s) 551
EcoO109I RGGNCCY 1 cut(s) 938
EcoRI GAATTC 1 cut(s) 629
EcoRII CCWGG 3 cut(s) 326, 427, 1249
EcoT14I CCWWGG 2 cut(s) 6, 2085
EcoT22I ATGCAT 2 cut(s) 894, 2116
ErhI CCWWGG 2 cut(s) 6, 2085
FaeI CATG 7 cut(s) 10, 160, 449, 662, 892, 896, 2118
FaqI GGGAC 1 cut(s) 650
FatI CATG 7 cut(s) 6, 156, 445, 658, 888, 892, 2114
FauI CCCGC 4 cut(s) 175, 1692, 1708, 1735
FbaI TGATCA 6 cut(s) 261, 397, 442, 655, 1087, 1660
FblI GTMKAC 1 cut(s) 144
FokI GGATG 3 cut(s) 198, 1028, 2035
FspBI CTAG 2 cut(s) 1370, 1538
GlaI GCGC 2 cut(s) 39, 99
GsuI CTGGAG 1 cut(s) 320
HaeII RGCGCY 1 cut(s) 41
HaeIII GGCC 7 cut(s) 5, 129, 546, 1119, 1453, 1621, 2060
HapII CCGG 3 cut(s) 456, 552, 1904
HgaI GACGC 1 cut(s) 1168
HhaI GCGC 2 cut(s) 40, 100
Hin1II CATG 7 cut(s) 10, 160, 449, 662, 892, 896, 2118
Hin6I GCGC 2 cut(s) 38, 98
HinP1I GCGC 2 cut(s) 38, 98
HincII GTYRAC 1 cut(s) 145
HindII GTYRAC 1 cut(s) 145
HpaII CCGG 3 cut(s) 456, 552, 1904
HphI GGTGA 5 cut(s) 533, 898, 1239, 1593, 2074
Hpy166II GTNNAC 5 cut(s) 145, 860, 1247, 1433, 1601
Hpy188III TCNNGA 6 cut(s) 179, 215, 299, 456, 680, 788
Hpy8I GTNNAC 5 cut(s) 145, 860, 1247, 1433, 1601
Hpy99I CGWCG 5 cut(s) 146, 149, 191, 385, 1184
HpyAV CCTTC 5 cut(s) 518, 613, 845, 1006, 1529
HpyCH4III ACNGT 3 cut(s) 61, 149, 385
HpyCH4V TGCA 9 cut(s) 44, 666, 741, 892, 1029, 1100, 1806, 1848, 2114
Hsp92II CATG 7 cut(s) 10, 160, 449, 662, 892, 896, 2118
HspAI GCGC 2 cut(s) 38, 98
Kpn2I TCCGGA 1 cut(s) 455
KpnI GGTACC 1 cut(s) 153
Ksp22I TGATCA 6 cut(s) 261, 397, 442, 655, 1087, 1660
KspI CCGCGG 1 cut(s) 417
LmnI GCTCC 2 cut(s) 275, 1784
LweI GCATC 5 cut(s) 7, 1138, 1284, 1696, 1712
MabI ACCWGGT 1 cut(s) 1249
MaeI CTAG 2 cut(s) 1370, 1538
MaeIII GTNAC 2 cut(s) 1737, 2080
MbiI CCGCTC 1 cut(s) 55
MflI RGATCY 1 cut(s) 70
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 8 cut(s) 65, 629, 651, 997, 1037, 1771, 1888, 1971
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 5 cut(s) 370, 617, 632, 1193, 1199
MmeI TCCRAC 3 cut(s) 398, 404, 1889
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 2 cut(s) 894, 2116
MroI TCCGGA 1 cut(s) 455
MscI TGGCCA 1 cut(s) 5
MseI TTAA 2 cut(s) 558, 1305
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 2 cut(s) 410, 416
MspI CCGG 3 cut(s) 456, 552, 1904
MspR9I CCNGG 5 cut(s) 328, 429, 552, 553, 1251
Mva1269I GAATGC 2 cut(s) 1181, 2040
MvaI CCWGG 3 cut(s) 328, 429, 1251
MvnI CGCG 1 cut(s) 416
NciI CCSGG 2 cut(s) 552, 553
NcoI CCATGG 1 cut(s) 6
NheI GCTAGC 2 cut(s) 1369, 1537
NlaIII CATG 7 cut(s) 10, 160, 449, 662, 892, 896, 2118
NlaIV GGNNCC 6 cut(s) 72, 151, 271, 372, 862, 939
NmuCI GTSAC 2 cut(s) 1737, 2080
NsiI ATGCAT 2 cut(s) 894, 2116
NspI RCATGY 1 cut(s) 2118
PaeI GCATGC 1 cut(s) 2118
PceI AGGCCT 2 cut(s) 129, 546
PctI GAATGC 2 cut(s) 1181, 2040
PfeI GAWTC 7 cut(s) 232, 1019, 1111, 1165, 1343, 1511, 1994
PinAI ACCGGT 1 cut(s) 1903
PleI GAGTC 5 cut(s) 370, 617, 632, 1192, 1198
PpsI GAGTC 5 cut(s) 370, 617, 632, 1192, 1198
PpuMI RGGWCCY 1 cut(s) 938
PsiI TTATAA 2 cut(s) 768, 1968
Psp5II RGGWCCY 1 cut(s) 938
Psp6I CCWGG 3 cut(s) 326, 427, 1249
PspGI CCWGG 3 cut(s) 326, 427, 1249
PspN4I GGNNCC 6 cut(s) 72, 151, 271, 372, 862, 939
PspPI GGNCC 5 cut(s) 241, 747, 860, 938, 1118
PspPPI RGGWCCY 1 cut(s) 938
PstI CTGCAG 2 cut(s) 1031, 1850
PstNI CAGNNNCTG 2 cut(s) 41, 1833
PsuI RGATCY 1 cut(s) 70
RsaI GTAC 3 cut(s) 83, 151, 1266
RsaNI GTAC 3 cut(s) 82, 150, 1265
SacII CCGCGG 1 cut(s) 417
SalI GTCGAC 1 cut(s) 143
SaqAI TTAA 2 cut(s) 558, 1305
Sau96I GGNCC 5 cut(s) 241, 747, 860, 938, 1118
SchI GAGTC 5 cut(s) 370, 617, 632, 1193, 1199
ScrFI CCNGG 5 cut(s) 328, 429, 552, 553, 1251
SexAI ACCWGGT 1 cut(s) 1249
SfaNI GCATC 5 cut(s) 7, 1138, 1284, 1696, 1712
SfcI CTRYAG 2 cut(s) 1027, 1846
Sfr303I CCGCGG 1 cut(s) 417
SgrBI CCGCGG 1 cut(s) 417
SgrDI CGTCGACG 1 cut(s) 143
SinI GGWCC 4 cut(s) 241, 747, 860, 938
SmaI CCCGGG 1 cut(s) 553
SphI GCATGC 1 cut(s) 2118
Sse9I AATT 8 cut(s) 65, 629, 651, 997, 1037, 1771, 1888, 1971
SseBI AGGCCT 2 cut(s) 129, 546
SspMI CTAG 2 cut(s) 1370, 1538
StuI AGGCCT 2 cut(s) 129, 546
StyD4I CCNGG 5 cut(s) 326, 427, 550, 551, 1249
StyI CCWWGG 2 cut(s) 6, 2085
TaaI ACNGT 3 cut(s) 61, 149, 385
TaqI TCGA 4 cut(s) 144, 180, 641, 1182
TasI AATT 8 cut(s) 65, 629, 651, 997, 1037, 1771, 1888, 1971
TfiI GAWTC 7 cut(s) 232, 1019, 1111, 1165, 1343, 1511, 1994
Tru1I TTAA 2 cut(s) 558, 1305
Tru9I TTAA 2 cut(s) 558, 1305
TscAI CASTG 7 cut(s) 51, 66, 233, 1039, 1165, 1794, 2080
TseFI GTSAC 2 cut(s) 1737, 2080
Tsp45I GTSAC 2 cut(s) 1737, 2080
TspDTI ATGAA 4 cut(s) 1188, 1962, 2007, 2037
TspGWI ACGGA 2 cut(s) 1355, 1523
TspMI CCCGGG 1 cut(s) 551
TspRI CASTG 7 cut(s) 51, 66, 233, 1039, 1165, 1794, 2080
VpaK11BI GGWCC 4 cut(s) 241, 747, 860, 938
XapI RAATTY 3 cut(s) 629, 997, 1971
XceI RCATGY 1 cut(s) 2118
XcmI CCANNNNNNNNNTGG 2 cut(s) 818, 931
XmaI CCCGGG 1 cut(s) 551
XmiI GTMKAC 1 cut(s) 144
XspI CTAG 2 cut(s) 1370, 1538
Zsp2I ATGCAT 2 cut(s) 894, 2116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.