Prupe.2G204700_v2.0.a1
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000197
Physical Location & Seq
Forward (+)
23984542 .. 23986033
1492 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G204700.1

Sequence Viewer

Length: 720 bp
ATGAAATACAGCTTCATTCTACTGATGCCATTGCAGCTTCTTCTTACTTGTTATATCCACACACACACACACACACAGATGGACTGCGGCTTCAGATTCCGTCCCACTGAAGAGGAACTGGTGAACTACTACTTGAGGAAGAAGAAACAGGACAAAGATTTTAAAGTTGACCACATCATCCCTGAGATTGATATCTGCAAGTACGAGCCTTGGGAGTTACCTGGGCTGTTCACAGAGCCAGAGTCGCCATATCAGGATATGTTCTTCTTCAGCCCAAGAGATTACAAGTACATCAACAACAGAGCTCGCACCAACAGGGTCACTAAGCGAGGCTTCTGGAAAACCACAGGCAAAGAACGTGTGATCAAGGGTGCTCGAGGGTCCAATGGGAGAAAGAAGACCTTGATCTTCTATGAAGGTCGTGTCACTCAATGTAACAGGACCAACTGGGTCATGCACGAGTATTATCTCTGTGAAGATGAAGCCATTCCAAATCCTAAGCTGGCCCAGCAGAGGGATTTTGTACTGTGTCGCTTGAGTAAAAAAGCAGATAAGCACGAAACTTCAATATGTGCTGTAGCTCAACCTGCATATGCTGAATGGGTTGGGAATTCGGAGGAATGTTCTCAGCCAGAAGAACTGGAATTAGTCTTTCCTGCACATCAGCTACAGGATAACATCTCGGGGGAGATGGAGTTTGAGATTTCTAGCAAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

240

Amino Acids

28.32

Weight (kDa)

7.57

Isoelectric Point (pI)

44.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000197)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18010 FvH4_7g18010 FvH4_7g18021 FvH4_7g18070 FvH4_7g18070 FvH4_7g18200 FvH4_7g18250
malus_domestica MD01G1092200.v1.1 MD01G1092500.v1.1 MD01G1092600.v1.1 MD01G1092900.v1.1 MD01G1093000.v1.1 MD01G1093200.v1.1 MD01G1093500.v1.1 MD01G1093700.v1.1 MD01G1093800.v1.1 MD01G1093900.v1.1 MD01G1094000.v1.1 MD01G1094200.v1.1 MD01G1094400.v1.1 MD01G1094500.v1.1 MD01G1094700.v1.1 MD01G1094800.v1.1 MD01G1095100.v1.1 MD07G1162700.v1.1 MD07G1163200.v1.1 MD07G1163400.v1.1 MD07G1163700.v1.1 MD07G1164000.v1.1 MD10G1186100.v1.1
prunus_persica Prupe.2G201200_v2.0.a1 Prupe.2G201200_v2.0.a1 Prupe.2G201300_v2.0.a1 Prupe.2G201800_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202800_v2.0.a1 Prupe.2G202900_v2.0.a1 Prupe.2G203000_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204900_v2.0.a1
pyrus_communis pycom01g11610 pycom01g11650 pycom01g11670 pycom01g11680 pycom01g11700 pycom01g11710 pycom01g11720 pycom01g11730 pycom07g15770 pycom07g15860 pycom07g15870 pycom07g15890 pycom07g15900 pycom07g15920
rosa_chinensis RchiOBHm_Chr1g0333731 RchiOBHm_Chr1g0361411 RchiOBHm_Chr1g0361501 RchiOBHm_Chr1g0361551 RchiOBHm_Chr1g0361631 RchiOBHm_Chr1g0361691 RchiOBHm_Chr1g0361701
rosa_laevigata RLG00000011640 RLG00000014882 RLG00000027709 RLG00000027713 RLG00000027717 RLG00000027719 RLG00000029532 RLG00000030171 RLG00000030174 RLG00000030177 RLG00000030181 RLG00000030186
rosa_multiflora Rmu_co8135790.1_g000001 Rmu_co8371689.1_g000001 Rmu_co8391943.1_g000001 Rmu_co8469521.1_g000001 Rmu_co8502503.1_g000002 Rmu_sc0001034.1_g000001 Rmu_sc0002119.1_g000002 Rmu_sc0002119.1_g000009 Rmu_sc0002119.1_g000019 Rmu_sc0003426.1_g000005 Rmu_sc0003693.1_g000010 Rmu_sc0003704.1_g000007 Rmu_sc0006101.1_g000005 Rmu_sc0006417.1_g000006 Rmu_sc0007217.1_g000012 Rmu_sc0010384.1_g000001 Rmu_sc0011258.1_g000003 Rmu_sc0017253.1_g000002 Rmu_ssc0000062.1_g000022
rosa_roxburghii Rroxscaffold_159G00432930 Rroxscaffold_159G00433040 Rroxscaffold_159G00433060 Rroxscaffold_4G00294780 Rroxscaffold_4G00294810 Rroxscaffold_4G00294870 Rroxscaffold_4G00294930 Rroxscaffold_4G00294950 Rroxscaffold_4G00317240 Rroxscaffold_4G00325190 Rroxscaffold_4G00325210
rosa_rugosa Rorug01G0047400 Rorug01G0047800 Rorug01G0048100 Rorug01G0048100 Rorug01G0111500 Rorug01G0111500 Rorug01G0289800 Rorug01G0290300 Rorug01G0290700 Rorug01G0290900
rosa_samantha Rh1AG063000 Rh1AG064000 Rh1AG064400 Rh1AG133700 Rh1AG300300 Rh1AG300900 Rh1AG301000 Rh1AG301100 Rh1BG263800 Rh1BG264000 Rh1BG264100 Rh1CG281800 Rh1CG282100 Rh1CG282200 Rh1DG294000 Rh1DG294100 Rh5BG200600
rosa_wichuraiana Rw1G005400 Rw1G011170 Rw1G026570 Rw1G026580 Rw1G026610 Rw1G026640 Rw1G026670 Rw1G026700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 595
AciI CCGC 1 cut(s) 87
AcsI RAATTY 1 cut(s) 610
AcuI CTGAAG 3 cut(s) 76, 129, 253
AfaI GTAC 3 cut(s) 203, 290, 525
AfiI CCNNNNNNNGG 2 cut(s) 513, 514
AflIII ACRYGT 1 cut(s) 358
AgsI TTSAA 1 cut(s) 567
AjnI CCWGG 1 cut(s) 220
AluBI AGCT 6 cut(s) 12, 37, 305, 502, 581, 667
AluI AGCT 6 cut(s) 12, 37, 305, 502, 581, 667
Alw21I GWGCWC 2 cut(s) 307, 376
Ama87I CYCGRG 2 cut(s) 375, 682
AoxI GGCC 1 cut(s) 504
ApeKI GCWGC 1 cut(s) 34
ApoI RAATTY 1 cut(s) 610
Asp700I GAANNNNTTC 1 cut(s) 486
AspS9I GGNCC 3 cut(s) 381, 441, 505
AsuHPI GGTGA 1 cut(s) 133
AvaI CYCGRG 2 cut(s) 375, 682
AvaII GGWCC 2 cut(s) 381, 441
BanII GRGCYC 1 cut(s) 307
BauI CACGAG 1 cut(s) 458
BbsI GAAGAC 1 cut(s) 404
Bbv12I GWGCWC 2 cut(s) 307, 376
BbvI GCAGC 1 cut(s) 46
BccI CCATC 2 cut(s) 73, 685
BciT130I CCWGG 1 cut(s) 222
BclI TGATCA 1 cut(s) 363
BfaI CTAG 1 cut(s) 708
BfmI CTRYAG 2 cut(s) 576, 668
BfuAI ACCTGC 1 cut(s) 595
BisI GCNGC 2 cut(s) 35, 88
BlsI GCNGC 2 cut(s) 36, 89
Bme1390I CCNGG 1 cut(s) 222
Bme18I GGWCC 2 cut(s) 381, 441
BmeT110I CYCGRG 2 cut(s) 375, 682
BmgT120I GGNCC 3 cut(s) 381, 441, 505
BmiI GGNNCC 1 cut(s) 382
BmrFI CCNGG 1 cut(s) 222
BmrI ACTGGG 1 cut(s) 457
BmsI GCATC 1 cut(s) 15
BmuI ACTGGG 1 cut(s) 457
BpiI GAAGAC 1 cut(s) 404
Bpu10I CCTNAGC 1 cut(s) 498
BpuEI CTTGAG 2 cut(s) 154, 556
BsaBI GATNNNNATC 1 cut(s) 191
BsaJI CCNNGG 2 cut(s) 209, 221
BsaXI ACNNNNNCTCC 2 cut(s) 680, 710
Bsc4I CCNNNNNNNGG 2 cut(s) 513, 514
Bse1I ACTGG 3 cut(s) 123, 452, 645
Bse3DI GCAATG 1 cut(s) 29
Bse8I GATNNNNATC 1 cut(s) 191
BseBI CCWGG 1 cut(s) 222
BseDI CCNNGG 2 cut(s) 209, 221
BseGI GGATG 1 cut(s) 177
BseJI GATNNNNATC 1 cut(s) 191
BseLI CCNNNNNNNGG 2 cut(s) 513, 514
BseMI GCAATG 1 cut(s) 29
BseMII CTCAG 2 cut(s) 174, 641
BseNI ACTGG 3 cut(s) 123, 452, 645
BseXI GCAGC 1 cut(s) 46
BseYI CCCAGC 1 cut(s) 507
BsgI GTGCAG 1 cut(s) 642
BshFI GGCC 1 cut(s) 506
BsiHKAI GWGCWC 2 cut(s) 307, 376
BsiHKCI CYCGRG 2 cut(s) 375, 682
BslFI GGGAC 1 cut(s) 87
BslI CCNNNNNNNGG 2 cut(s) 513, 514
BsmFI GGGAC 1 cut(s) 87
BsnI GGCC 1 cut(s) 506
BsoBI CYCGRG 2 cut(s) 375, 682
Bsp1286I GDGCHC 2 cut(s) 307, 376
Bsp143I GATC 2 cut(s) 363, 405
BspACI CCGC 1 cut(s) 87
BspANI GGCC 1 cut(s) 506
BspCNI CTCAG 2 cut(s) 175, 640
BspLI GGNNCC 1 cut(s) 382
BspMI ACCTGC 1 cut(s) 595
BsrDI GCAATG 1 cut(s) 29
BsrI ACTGG 3 cut(s) 123, 452, 645
BssECI CCNNGG 2 cut(s) 209, 221
BssMI GATC 2 cut(s) 363, 405
BssSI CACGAG 1 cut(s) 458
BssT1I CCWWGG 1 cut(s) 209
Bst2BI CACGAG 1 cut(s) 458
Bst2UI CCWGG 1 cut(s) 222
Bst4CI ACNGT 1 cut(s) 528
Bst6I CTCTTC 1 cut(s) 105
BstC8I GCNNGC 2 cut(s) 307, 504
BstDEI CTNAG 4 cut(s) 183, 324, 498, 627
BstF5I GGATG 1 cut(s) 177
BstKTI GATC 2 cut(s) 366, 408
BstMBI GATC 2 cut(s) 363, 405
BstMWI GCNNNNNNNGC 4 cut(s) 34, 244, 508, 587
BstNI CCWGG 1 cut(s) 222
BstSCI CCNGG 1 cut(s) 220
BstSFI CTRYAG 2 cut(s) 576, 668
BstV1I GCAGC 1 cut(s) 46
BstV2I GAAGAC 1 cut(s) 404
BsuRI GGCC 1 cut(s) 506
BtsCI GGATG 1 cut(s) 177
BtsIMutI CAGTG 1 cut(s) 105
BveI ACCTGC 1 cut(s) 595
Cac8I GCNNGC 2 cut(s) 307, 504
Cfr13I GGNCC 3 cut(s) 381, 441, 505
Csp6I GTAC 3 cut(s) 202, 289, 524
CviAII CATG 1 cut(s) 454
CviQI GTAC 3 cut(s) 202, 289, 524
DdeI CTNAG 4 cut(s) 183, 324, 498, 627
DpnI GATC 2 cut(s) 365, 407
DpnII GATC 2 cut(s) 363, 405
DraI TTTAAA 1 cut(s) 163
Eam1104I CTCTTC 1 cut(s) 105
EarI CTCTTC 1 cut(s) 105
Ecl136II GAGCTC 1 cut(s) 305
Eco130I CCWWGG 1 cut(s) 209
Eco24I GRGCYC 1 cut(s) 307
Eco32I GATATC 1 cut(s) 193
Eco47I GGWCC 2 cut(s) 381, 441
Eco53kI GAGCTC 1 cut(s) 305
Eco57I CTGAAG 3 cut(s) 76, 129, 253
Eco88I CYCGRG 2 cut(s) 375, 682
EcoICRI GAGCTC 1 cut(s) 305
EcoRI GAATTC 1 cut(s) 610
EcoRII CCWGG 1 cut(s) 220
EcoRV GATATC 1 cut(s) 193
EcoT14I CCWWGG 1 cut(s) 209
EcoT38I GRGCYC 1 cut(s) 307
ErhI CCWWGG 1 cut(s) 209
FaeI CATG 1 cut(s) 457
FaiI YATR 8 cut(s) 54, 250, 260, 414, 455, 571, 592, 594
FalI AAGNNNNNCTT 4 cut(s) 317, 349, 386, 418
FaqI GGGAC 1 cut(s) 87
FatI CATG 1 cut(s) 453
FauNDI CATATG 1 cut(s) 592
FbaI TGATCA 1 cut(s) 363
Fnu4HI GCNGC 2 cut(s) 35, 88
FokI GGATG 1 cut(s) 164
FriOI GRGCYC 1 cut(s) 307
Fsp4HI GCNGC 2 cut(s) 35, 88
FspBI CTAG 1 cut(s) 708
GluI GCNGC 2 cut(s) 35, 88
GsaI CCCAGC 1 cut(s) 511
HaeIII GGCC 1 cut(s) 506
Hin1II CATG 1 cut(s) 457
HincII GTYRAC 1 cut(s) 169
HindII GTYRAC 1 cut(s) 169
HinfI GANTC 2 cut(s) 96, 242
HphI GGTGA 1 cut(s) 133
Hpy166II GTNNAC 3 cut(s) 124, 169, 231
Hpy188I TCNGA 2 cut(s) 95, 616
Hpy188III TCNNGA 2 cut(s) 254, 337
Hpy8I GTNNAC 3 cut(s) 124, 169, 231
HpyAV CCTTC 1 cut(s) 410
HpyCH4III ACNGT 1 cut(s) 528
HpyCH4IV ACGT 1 cut(s) 358
HpyCH4V TGCA 5 cut(s) 34, 198, 457, 590, 659
HpyF10VI GCNNNNNNNGC 4 cut(s) 34, 244, 508, 587
HpyF3I CTNAG 4 cut(s) 183, 324, 498, 627
HpySE526I ACGT 1 cut(s) 358
Hsp92II CATG 1 cut(s) 457
Ksp22I TGATCA 1 cut(s) 363
Kzo9I GATC 2 cut(s) 363, 405
Lsp1109I GCAGC 1 cut(s) 46
LweI GCATC 1 cut(s) 15
MaeI CTAG 1 cut(s) 708
MaeII ACGT 1 cut(s) 358
MaeIII GTNAC 4 cut(s) 216, 319, 424, 434
MalI GATC 2 cut(s) 365, 407
MboI GATC 2 cut(s) 363, 405
MhlI GDGCHC 2 cut(s) 307, 376
MluCI AATT 2 cut(s) 610, 644
MlyI GAGTC 1 cut(s) 251
MnlI CCTC 6 cut(s) 106, 129, 323, 371, 507, 610
MroXI GAANNNNTTC 1 cut(s) 486
MseI TTAA 1 cut(s) 162
MslI CAYNNNNRTG 1 cut(s) 77
MspR9I CCNGG 1 cut(s) 222
MvaI CCWGG 1 cut(s) 222
MwoI GCNNNNNNNGC 4 cut(s) 34, 244, 508, 587
NdeI CATATG 1 cut(s) 592
NdeII GATC 2 cut(s) 363, 405
NlaIII CATG 1 cut(s) 457
NlaIV GGNNCC 1 cut(s) 382
NmuCI GTSAC 2 cut(s) 319, 424
PaeR7I CTCGAG 1 cut(s) 375
PdmI GAANNNNTTC 1 cut(s) 486
PfeI GAWTC 1 cut(s) 96
PkrI GCNGC 2 cut(s) 36, 89
PleI GAGTC 1 cut(s) 250
PpsI GAGTC 1 cut(s) 250
Psp124BI GAGCTC 1 cut(s) 307
Psp6I CCWGG 1 cut(s) 220
PspFI CCCAGC 1 cut(s) 507
PspGI CCWGG 1 cut(s) 220
PspN4I GGNNCC 1 cut(s) 382
PspPI GGNCC 3 cut(s) 381, 441, 505
PspXI VCTCGAGB 1 cut(s) 375
RsaI GTAC 3 cut(s) 203, 290, 525
RsaNI GTAC 3 cut(s) 202, 289, 524
RseI CAYNNNNRTG 1 cut(s) 77
SacI GAGCTC 1 cut(s) 307
SaqAI TTAA 1 cut(s) 162
SatI GCNGC 2 cut(s) 35, 88
Sau3AI GATC 2 cut(s) 363, 405
Sau96I GGNCC 3 cut(s) 381, 441, 505
SchI GAGTC 1 cut(s) 251
ScrFI CCNGG 1 cut(s) 222
SduI GDGCHC 2 cut(s) 307, 376
SfaNI GCATC 1 cut(s) 15
SfcI CTRYAG 2 cut(s) 576, 668
Sfr274I CTCGAG 1 cut(s) 375
SinI GGWCC 2 cut(s) 381, 441
SlaI CTCGAG 1 cut(s) 375
SmiMI CAYNNNNRTG 1 cut(s) 77
SmlI CTYRAG 3 cut(s) 133, 375, 535
SmoI CTYRAG 3 cut(s) 133, 375, 535
Sse9I AATT 2 cut(s) 610, 644
SsiI CCGC 1 cut(s) 87
SspMI CTAG 1 cut(s) 708
SstI GAGCTC 1 cut(s) 307
StyD4I CCNGG 1 cut(s) 220
StyI CCWWGG 1 cut(s) 209
TaaI ACNGT 1 cut(s) 528
TaiI ACGT 1 cut(s) 361
TaqI TCGA 1 cut(s) 376
TasI AATT 2 cut(s) 610, 644
TatI WGTACW 2 cut(s) 288, 523
TauI GCSGC 1 cut(s) 90
TfiI GAWTC 1 cut(s) 96
Tru1I TTAA 1 cut(s) 162
Tru9I TTAA 1 cut(s) 162
TscAI CASTG 1 cut(s) 112
TseFI GTSAC 2 cut(s) 319, 424
TseI GCWGC 1 cut(s) 34
Tsp45I GTSAC 2 cut(s) 319, 424
TspDTI ATGAA 4 cut(s) 4, 17, 429, 495
TspGWI ACGGA 1 cut(s) 89
TspRI CASTG 1 cut(s) 112
VpaK11BI GGWCC 2 cut(s) 381, 441
XapI RAATTY 1 cut(s) 610
XhoI CTCGAG 1 cut(s) 375
XmnI GAANNNNTTC 1 cut(s) 486
XspI CTAG 1 cut(s) 708
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.