Rorug01G0047800
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000197
Physical Location & Seq
Reverse (-)
7907773 .. 7916001
8229 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0047800.1

Sequence Viewer

Length: 1848 bp
ATGCCCTCTCTCTCCTTCCCATCTCTGACTCTGCCGCTCAAACCTAACAAACGCCTCCTCCCCAACAAGCACAACAAGCCTTCCTGCCTCGTCCAATCCATCCTCAACCTCTGCTCCCAAGGCCAACTCTCCCAAGCCGTCTCCTCCCTCGACCTCTTATTCCGAAAAGGTATTCGCTTGCCCACCAAGACTCTCGCTTTTCTACTGCAGCATTGCGGAGACGCTCGGTCCCTCAGAGAAGGCAAATGGGTTCACTTGTATTTGAGGCTTTCCGGATTCAAACGCCCGCCTTTGCTTTTGGCTAACCATTTGATTGGGATGTACTTCAAATGCGGCGATGAGGTTGATGCACGCAAGGTGTTTGATAAAATGTTTGTGAGGAATTTGTACTCGTGGAACAATATGCTATCTGGGTATGCGAAGCTGAGGAATCTGAAGGAGGCCCGGAGCTTGTTTGAGAAAATGCCTGAGAGGGATGTTGTGTCCTGGAACACCATGGTGATTGGTTATGCCCAGAATGGGGATTGTGATGAGGCTTTGAGGTTTTATAGAGAGTTGCGGAGATCGTCGGTTGGGTTTAATGAGTTTAGTTTTGCAGGTGTTTTGACTGTGTGTGTGAAGATGAGGGAATGGGAGCTTATTAGGCAGGCTCATGGGCAGGTCTTGGTTGCTGGGTTTTTGTCGAATGTGGTGCTTTCGAGTTCGGTGGTGGATGCTTATGCCAAGTGTGGGGAGATGGCGGATGCCAGGAGATTGTTCGATGAGATGGCTGTGAGGGATGTTCTTGCTTGGACCACACTGGTTTCAGGATATGCCAAATGGGGTGATATGAAATCAGCTAGTGAGTTGTTTGATCGGATGCCTGAGAAGAACCCGGTGTCATGGACATCTATGATTTCGGGGTATGCTAGGAATGGATTGGGGCATGAAGCGCTTGCATTGTTTGCAGAGATGATGCTGTTTCAAGTCAGGCCTGATCAGTTTACCTTTAGTAGTTGCCTTTGTGCTTGTGCTAGTATAGCTTCGCTTAAGCATGGTAAACAAATTCATGCCTCTTTAATACGAAGTAATTTAAGACCCAACACGATTGTTGTGAGTTCTCTTATCGACATGTATTCCAAATGCGGCAGTTTGGGGGCCGGAAGGCAGGTTTTCAAGCTCATGGGTGATAAGCAAGACATCGTGTTATGGAACACAATGATGTCTGCCTTAGCACAGCATGGTCATGGTATAGAGGCATTGCAGATGTTTGAAGACATGGTCAGTTCAGGTGTAAAGCCGGTTACGACCACCTTGGTTGTCATTCTCAATGCTTGTAGTCATTCTGGTCTAGTGCAGGAAGGGCGTAGGATTTTCAAGTCCATGACTGATGATTATGGCATTGTTCCTGATGAGGAACATTATGCATGCTTAATTGATCTCTTGGGTCGAGCTGGATGTTTTGATGAGTTGATGAACCAGCTCGAAAATATGCCATGTAAAGCTGGCGGTCAAGTTTGGAATGCATTACTTGGTGTTTGTAGAATCCATGGAAATACAGAGCTGGGAAGAAAAGTGGCCGAACACCTTATTGAGTTGGAGCCTCAATCTTCTGCTCCCTATGTTTTGCTTTCAAGCATATATGCTGAAGAAGGTAGATGGGAGCTGGTAGGGAAGGTGAGACGGCTTATGGATGAGAGACATGTGAGGAAAGAGCGGGCCATTAGTTGGGTAGAAGTTGAAAGTAGAGTGCATGCTTTCACTGTATCAGACCGGCTGCATCCTCTGAAAGAGGAAATATACTCAGTTTTGAAACAGTTAGCTGACCAGATGGAAGAAGATGCTTCAGTAACTAACGCCGAAAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

615

Amino Acids

69.16

Weight (kDa)

8.37

Isoelectric Point (pI)

48.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR PF01535 130 - 159 1e-07 PPR repeat
PPR_2 PF13041 158 - 207 1.7e-07 PPR repeat family
PPR PF01535 161 - 190 2.3e-07 PPR repeat
PPR PF01535 263 - 291 9.5e-07 PPR repeat
PPR_2 PF13041 291 - 338 1.1e-10 PPR repeat family
PPR PF01535 293 - 319 3.2e-08 PPR repeat
PPR_2 PF13041 393 - 440 5.7e-10 PPR repeat family
PPR PF01535 395 - 425 8.5e-08 PPR repeat
E_motif PF20431 510 - 572 7.2e-15 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000197)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18010 FvH4_7g18010 FvH4_7g18021 FvH4_7g18070 FvH4_7g18070 FvH4_7g18200 FvH4_7g18250
malus_domestica MD01G1092200.v1.1 MD01G1092500.v1.1 MD01G1092600.v1.1 MD01G1092900.v1.1 MD01G1093000.v1.1 MD01G1093200.v1.1 MD01G1093500.v1.1 MD01G1093700.v1.1 MD01G1093800.v1.1 MD01G1093900.v1.1 MD01G1094000.v1.1 MD01G1094200.v1.1 MD01G1094400.v1.1 MD01G1094500.v1.1 MD01G1094700.v1.1 MD01G1094800.v1.1 MD01G1095100.v1.1 MD07G1162700.v1.1 MD07G1163200.v1.1 MD07G1163400.v1.1 MD07G1163700.v1.1 MD07G1164000.v1.1 MD10G1186100.v1.1
prunus_persica Prupe.2G201200_v2.0.a1 Prupe.2G201200_v2.0.a1 Prupe.2G201300_v2.0.a1 Prupe.2G201800_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202800_v2.0.a1 Prupe.2G202900_v2.0.a1 Prupe.2G203000_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204900_v2.0.a1
pyrus_communis pycom01g11610 pycom01g11650 pycom01g11670 pycom01g11680 pycom01g11700 pycom01g11710 pycom01g11720 pycom01g11730 pycom07g15770 pycom07g15860 pycom07g15870 pycom07g15890 pycom07g15900 pycom07g15920
rosa_chinensis RchiOBHm_Chr1g0333731 RchiOBHm_Chr1g0361411 RchiOBHm_Chr1g0361501 RchiOBHm_Chr1g0361551 RchiOBHm_Chr1g0361631 RchiOBHm_Chr1g0361691 RchiOBHm_Chr1g0361701
rosa_laevigata RLG00000011640 RLG00000014882 RLG00000027709 RLG00000027713 RLG00000027717 RLG00000027719 RLG00000029532 RLG00000030171 RLG00000030174 RLG00000030177 RLG00000030181 RLG00000030186
rosa_multiflora Rmu_co8135790.1_g000001 Rmu_co8371689.1_g000001 Rmu_co8391943.1_g000001 Rmu_co8469521.1_g000001 Rmu_co8502503.1_g000002 Rmu_sc0001034.1_g000001 Rmu_sc0002119.1_g000002 Rmu_sc0002119.1_g000009 Rmu_sc0002119.1_g000019 Rmu_sc0003426.1_g000005 Rmu_sc0003693.1_g000010 Rmu_sc0003704.1_g000007 Rmu_sc0006101.1_g000005 Rmu_sc0006417.1_g000006 Rmu_sc0007217.1_g000012 Rmu_sc0010384.1_g000001 Rmu_sc0011258.1_g000003 Rmu_sc0017253.1_g000002 Rmu_ssc0000062.1_g000022
rosa_roxburghii Rroxscaffold_159G00432930 Rroxscaffold_159G00433040 Rroxscaffold_159G00433060 Rroxscaffold_4G00294780 Rroxscaffold_4G00294810 Rroxscaffold_4G00294870 Rroxscaffold_4G00294930 Rroxscaffold_4G00294950 Rroxscaffold_4G00317240 Rroxscaffold_4G00325190 Rroxscaffold_4G00325210
rosa_rugosa Rorug01G0047400 Rorug01G0047800 Rorug01G0048100 Rorug01G0048100 Rorug01G0111500 Rorug01G0111500 Rorug01G0289800 Rorug01G0290300 Rorug01G0290700 Rorug01G0290900
rosa_samantha Rh1AG063000 Rh1AG064000 Rh1AG064400 Rh1AG133700 Rh1AG300300 Rh1AG300900 Rh1AG301000 Rh1AG301100 Rh1BG263800 Rh1BG264000 Rh1BG264100 Rh1CG281800 Rh1CG282100 Rh1CG282200 Rh1DG294000 Rh1DG294100 Rh5BG200600
rosa_wichuraiana Rw1G005400 Rw1G011170 Rw1G026570 Rw1G026580 Rw1G026610 Rw1G026640 Rw1G026670 Rw1G026700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 587
Acc36I ACCTGC 3 cut(s) 587, 649, 1138
AccB7I CCANNNNNTGG 1 cut(s) 1707
AccBSI CCGCTC 2 cut(s) 37, 1696
AccIII TCCGGA 1 cut(s) 272
AciI CCGC 9 cut(s) 35, 216, 287, 333, 559, 740, 1125, 1488, 1696
AcoI YGGCCR 1 cut(s) 1557
AcsI RAATTY 2 cut(s) 382, 1044
AcuI CTGAAG 3 cut(s) 455, 1647, 1809
AfaI GTAC 2 cut(s) 323, 389
AfeI AGCGCT 1 cut(s) 933
AfiI CCNNNNNNNGG 4 cut(s) 519, 520, 729, 1707
AflII CTTAAG 1 cut(s) 1028
AflIII ACRYGT 2 cut(s) 1110, 1681
AgsI TTSAA 9 cut(s) 280, 328, 965, 1156, 1253, 1357, 1614, 1721, 1792
AhdI GACNNNNNGTC 1 cut(s) 226
AjnI CCWGG 2 cut(s) 485, 746
AleI CACNNNNGTG 1 cut(s) 497
Alw26I GTCTC 4 cut(s) 145, 213, 1654, 1672
Aor13HI TCCGGA 1 cut(s) 272
Aor51HI AGCGCT 1 cut(s) 933
AoxI GGCC 6 cut(s) 121, 441, 971, 1137, 1557, 1698
ApeKI GCWGC 2 cut(s) 208, 1756
ApoI RAATTY 2 cut(s) 382, 1044
AspLEI GCGC 1 cut(s) 934
AspS9I GGNCC 5 cut(s) 228, 442, 792, 1137, 1698
AsuC2I CCSGG 2 cut(s) 445, 875
AsuHPI GGTGA 4 cut(s) 511, 836, 1178, 1669
AvaII GGWCC 2 cut(s) 228, 792
BauI CACGAG 1 cut(s) 391
BbsI GAAGAC 1 cut(s) 1260
BbvCI CCTCAGC 1 cut(s) 425
BbvI GCAGC 2 cut(s) 220, 1743
BccI CCATC 6 cut(s) 28, 107, 730, 760, 1632, 1804
BceAI ACGGC 2 cut(s) 122, 1679
BcgI CGANNNNNNTGC 2 cut(s) 673, 707
BciT130I CCWGG 2 cut(s) 487, 748
BclI TGATCA 1 cut(s) 976
BcnI CCSGG 2 cut(s) 445, 875
BcoDI GTCTC 4 cut(s) 145, 213, 1654, 1672
BfaI CTAG 5 cut(s) 840, 909, 1014, 1331, 1846
BfmI CTRYAG 1 cut(s) 206
BfoI RGCGCY 1 cut(s) 935
BfrI CTTAAG 1 cut(s) 1028
BfuAI ACCTGC 3 cut(s) 587, 649, 1138
BisI GCNGC 5 cut(s) 35, 209, 334, 1126, 1757
BlsI GCNGC 5 cut(s) 36, 210, 335, 1127, 1758
Bme1390I CCNGG 4 cut(s) 445, 487, 748, 875
Bme18I GGWCC 2 cut(s) 228, 792
BmeRI GACNNNNNGTC 1 cut(s) 226
BmgT120I GGNCC 5 cut(s) 228, 442, 792, 1137, 1698
BmiI GGNNCC 3 cut(s) 230, 1138, 1581
BmrFI CCNGG 4 cut(s) 445, 487, 748, 875
BmsI GCATC 7 cut(s) 337, 703, 733, 849, 945, 1768, 1810
BpiI GAAGAC 1 cut(s) 1260
Bpu10I CCTNAGC 2 cut(s) 425, 1210
BpuMI CCSGG 2 cut(s) 445, 875
BsaJI CCNNGG 4 cut(s) 118, 495, 1293, 1528
BsaWI WCCGGW 1 cut(s) 272
BsaXI ACNNNNNCTCC 4 cut(s) 42, 72, 98, 128
Bsc4I CCNNNNNNNGG 4 cut(s) 519, 520, 729, 1707
Bse118I RCCGGY 2 cut(s) 1279, 1752
Bse1I ACTGG 1 cut(s) 804
Bse3DI GCAATG 2 cut(s) 211, 1238
BseAI TCCGGA 1 cut(s) 272
BseBI CCWGG 2 cut(s) 487, 748
BseDI CCNNGG 4 cut(s) 118, 495, 1293, 1528
BseLI CCNNNNNNNGG 4 cut(s) 519, 520, 729, 1707
BseMI GCAATG 2 cut(s) 211, 1238
BseMII CTCAG 5 cut(s) 247, 416, 459, 855, 1797
BseNI ACTGG 1 cut(s) 804
BseRI GAGGAG 2 cut(s) 47, 133
BseXI GCAGC 2 cut(s) 220, 1743
BseYI CCCAGC 2 cut(s) 671, 1543
BsgI GTGCAG 1 cut(s) 1355
BshFI GGCC 6 cut(s) 123, 443, 973, 1139, 1559, 1700
BsiSI CCGG 6 cut(s) 273, 445, 875, 1140, 1280, 1753
BslFI GGGAC 1 cut(s) 214
BslI CCNNNNNNNGG 4 cut(s) 519, 520, 729, 1707
BsmAI GTCTC 4 cut(s) 145, 213, 1654, 1672
BsmBI CGTCTC 3 cut(s) 145, 213, 1654
BsmFI GGGAC 1 cut(s) 214
BsmI GAATGC 1 cut(s) 1507
BsnI GGCC 6 cut(s) 123, 443, 973, 1139, 1559, 1700
Bsp13I TCCGGA 1 cut(s) 272
Bsp143I GATC 4 cut(s) 563, 853, 976, 1417
Bsp19I CCATGG 2 cut(s) 495, 1528
BspACI CCGC 9 cut(s) 35, 216, 287, 333, 559, 740, 1125, 1488, 1696
BspANI GGCC 6 cut(s) 123, 443, 973, 1139, 1559, 1700
BspCNI CTCAG 5 cut(s) 246, 417, 460, 856, 1796
BspEI TCCGGA 1 cut(s) 272
BspLI GGNNCC 3 cut(s) 230, 1138, 1581
BspMAI CTGCAG 1 cut(s) 210
BspMI ACCTGC 3 cut(s) 587, 649, 1138
BspTI CTTAAG 1 cut(s) 1028
BsrBI CCGCTC 2 cut(s) 37, 1696
BsrDI GCAATG 2 cut(s) 211, 1238
BsrFI RCCGGY 2 cut(s) 1279, 1752
BsrI ACTGG 1 cut(s) 804
BssAI RCCGGY 2 cut(s) 1279, 1752
BssECI CCNNGG 4 cut(s) 118, 495, 1293, 1528
BssMI GATC 4 cut(s) 563, 853, 976, 1417
BssSI CACGAG 1 cut(s) 391
BssT1I CCWWGG 4 cut(s) 118, 495, 1293, 1528
Bst2BI CACGAG 1 cut(s) 391
Bst2UI CCWGG 2 cut(s) 487, 748
Bst4CI ACNGT 3 cut(s) 610, 1744, 1797
BstAFI CTTAAG 1 cut(s) 1028
BstAPI GCANNNNNTGC 1 cut(s) 944
BstC8I GCNNGC 9 cut(s) 179, 287, 352, 648, 936, 1408, 1486, 1698, 1734
BstDEI CTNAG 6 cut(s) 233, 425, 468, 864, 1210, 1783
BstDSI CCRYGG 2 cut(s) 495, 1528
BstH2I RGCGCY 1 cut(s) 935
BstHHI GCGC 1 cut(s) 934
BstKTI GATC 4 cut(s) 566, 856, 979, 1420
BstMAI GTCTC 4 cut(s) 145, 213, 1654, 1672
BstMBI GATC 4 cut(s) 563, 853, 976, 1417
BstMWI GCNNNNNNNGC 7 cut(s) 76, 120, 643, 931, 944, 1019, 1342
BstNI CCWGG 2 cut(s) 487, 748
BstNSI RCATGY 4 cut(s) 1114, 1410, 1685, 1736
BstSCI CCNGG 4 cut(s) 443, 485, 746, 873
BstSFI CTRYAG 1 cut(s) 206
BstV1I GCAGC 2 cut(s) 220, 1743
BstV2I GAAGAC 1 cut(s) 1260
BstXI CCANNNNNNTGG 1 cut(s) 314
BsuRI GGCC 6 cut(s) 123, 443, 973, 1139, 1559, 1700
BtgI CCRYGG 2 cut(s) 495, 1528
BtgZI GCGATG 1 cut(s) 351
BtsIMutI CAGTG 2 cut(s) 797, 1740
BveI ACCTGC 3 cut(s) 587, 649, 1138
Cac8I GCNNGC 9 cut(s) 179, 287, 352, 648, 936, 1408, 1486, 1698, 1734
CfoI GCGC 1 cut(s) 934
Cfr10I RCCGGY 2 cut(s) 1279, 1752
Cfr13I GGNCC 5 cut(s) 228, 442, 792, 1137, 1698
CseI GACGC 1 cut(s) 230
Csp6I GTAC 2 cut(s) 322, 388
CspCI CAANNNNNGTGG 2 cut(s) 1279, 1314
CviQI GTAC 2 cut(s) 322, 388
DdeI CTNAG 6 cut(s) 233, 425, 468, 864, 1210, 1783
DpnI GATC 4 cut(s) 565, 855, 978, 1419
DpnII GATC 4 cut(s) 563, 853, 976, 1417
DriI GACNNNNNGTC 1 cut(s) 226
EaeI YGGCCR 1 cut(s) 1557
Eam1105I GACNNNNNGTC 1 cut(s) 226
EciI GGCGGA 1 cut(s) 755
Eco130I CCWWGG 4 cut(s) 118, 495, 1293, 1528
Eco147I AGGCCT 1 cut(s) 973
Eco47I GGWCC 2 cut(s) 228, 792
Eco47III AGCGCT 1 cut(s) 933
Eco57I CTGAAG 3 cut(s) 455, 1647, 1809
EcoRII CCWGG 2 cut(s) 485, 746
EcoT14I CCWWGG 4 cut(s) 118, 495, 1293, 1528
EcoT22I ATGCAT 2 cut(s) 1408, 1507
ErhI CCWWGG 4 cut(s) 118, 495, 1293, 1528
Esp3I CGTCTC 3 cut(s) 145, 213, 1654
FaqI GGGAC 1 cut(s) 214
FauI CCCGC 2 cut(s) 294, 1689
FbaI TGATCA 1 cut(s) 976
Fnu4HI GCNGC 5 cut(s) 35, 209, 334, 1126, 1757
Fsp4HI GCNGC 5 cut(s) 35, 209, 334, 1126, 1757
FspBI CTAG 5 cut(s) 840, 909, 1014, 1331, 1846
GlaI GCGC 1 cut(s) 933
GluI GCNGC 5 cut(s) 35, 209, 334, 1126, 1757
GsaI CCCAGC 2 cut(s) 675, 1547
HaeII RGCGCY 1 cut(s) 935
HaeIII GGCC 6 cut(s) 123, 443, 973, 1139, 1559, 1700
HapII CCGG 6 cut(s) 273, 445, 875, 1140, 1280, 1753
HgaI GACGC 1 cut(s) 230
HhaI GCGC 1 cut(s) 934
Hin6I GCGC 1 cut(s) 932
HinP1I GCGC 1 cut(s) 932
HinfI GANTC 5 cut(s) 28, 190, 276, 430, 1524
HpaII CCGG 6 cut(s) 273, 445, 875, 1140, 1280, 1753
HphI GGTGA 4 cut(s) 511, 836, 1178, 1669
Hpy166II GTNNAC 3 cut(s) 253, 984, 1040
Hpy188I TCNGA 7 cut(s) 27, 164, 236, 435, 858, 1750, 1767
Hpy188III TCNNGA 3 cut(s) 273, 807, 1388
Hpy8I GTNNAC 3 cut(s) 253, 984, 1040
Hpy99I CGWCG 1 cut(s) 571
HpyAV CCTTC 8 cut(s) 25, 90, 233, 430, 1137, 1334, 1625, 1648
HpyCH4III ACNGT 3 cut(s) 610, 1744, 1797
HpyF10VI GCNNNNNNNGC 7 cut(s) 76, 120, 643, 931, 944, 1019, 1342
HpyF3I CTNAG 6 cut(s) 233, 425, 468, 864, 1210, 1783
HspAI GCGC 1 cut(s) 932
Kpn2I TCCGGA 1 cut(s) 272
Ksp22I TGATCA 1 cut(s) 976
Kzo9I GATC 4 cut(s) 563, 853, 976, 1417
LmnI GCTCC 6 cut(s) 119, 447, 634, 1579, 1600, 1642
Lsp1109I GCAGC 2 cut(s) 220, 1743
LweI GCATC 7 cut(s) 337, 703, 733, 849, 945, 1768, 1810
MaeI CTAG 5 cut(s) 840, 909, 1014, 1331, 1846
MaeIII GTNAC 2 cut(s) 1282, 1828
MalI GATC 4 cut(s) 565, 855, 978, 1419
MbiI CCGCTC 2 cut(s) 37, 1696
MboI GATC 4 cut(s) 563, 853, 976, 1417
MboII GAAGA 8 cut(s) 631, 880, 1265, 1560, 1581, 1640, 1826, 1829
MluCI AATT 4 cut(s) 382, 1044, 1069, 1413
MlyI GAGTC 2 cut(s) 22, 184
MmeI TCCRAC 1 cut(s) 1557
Mph1103I ATGCAT 2 cut(s) 1408, 1507
MroI TCCGGA 1 cut(s) 272
MseI TTAA 5 cut(s) 579, 1029, 1058, 1073, 1412
MslI CAYNNNNRTG 3 cut(s) 497, 1199, 1224
MspCI CTTAAG 1 cut(s) 1028
MspI CCGG 6 cut(s) 273, 445, 875, 1140, 1280, 1753
MspR9I CCNGG 4 cut(s) 445, 487, 748, 875
Mva1269I GAATGC 1 cut(s) 1507
MvaI CCWGG 2 cut(s) 487, 748
MwoI GCNNNNNNNGC 7 cut(s) 76, 120, 643, 931, 944, 1019, 1342
NciI CCSGG 2 cut(s) 445, 875
NcoI CCATGG 2 cut(s) 495, 1528
NdeII GATC 4 cut(s) 563, 853, 976, 1417
NlaIV GGNNCC 3 cut(s) 230, 1138, 1581
NsiI ATGCAT 2 cut(s) 1408, 1507
NspI RCATGY 4 cut(s) 1114, 1410, 1685, 1736
OliI CACNNNNGTG 1 cut(s) 497
PaeI GCATGC 2 cut(s) 1410, 1736
PaqCI CACCTGC 1 cut(s) 587
PceI AGGCCT 1 cut(s) 973
PciI ACATGT 2 cut(s) 1110, 1681
PctI GAATGC 1 cut(s) 1507
PfeI GAWTC 3 cut(s) 276, 430, 1524
PflFI GACNNNGTC 1 cut(s) 1259
PflMI CCANNNNNTGG 1 cut(s) 1707
PfoI TCCNGGA 1 cut(s) 485
PkrI GCNGC 5 cut(s) 36, 210, 335, 1127, 1758
PleI GAGTC 2 cut(s) 22, 184
PpsI GAGTC 2 cut(s) 22, 184
PscI ACATGT 2 cut(s) 1110, 1681
Psp6I CCWGG 2 cut(s) 485, 746
PspFI CCCAGC 2 cut(s) 671, 1543
PspGI CCWGG 2 cut(s) 485, 746
PspN4I GGNNCC 3 cut(s) 230, 1138, 1581
PspPI GGNCC 5 cut(s) 228, 442, 792, 1137, 1698
PstI CTGCAG 1 cut(s) 210
PsyI GACNNNGTC 1 cut(s) 1259
RsaI GTAC 2 cut(s) 323, 389
RsaNI GTAC 2 cut(s) 322, 388
RseI CAYNNNNRTG 3 cut(s) 497, 1199, 1224
SaqAI TTAA 5 cut(s) 579, 1029, 1058, 1073, 1412
SatI GCNGC 5 cut(s) 35, 209, 334, 1126, 1757
Sau3AI GATC 4 cut(s) 563, 853, 976, 1417
Sau96I GGNCC 5 cut(s) 228, 442, 792, 1137, 1698
SchI GAGTC 2 cut(s) 22, 184
ScrFI CCNGG 4 cut(s) 445, 487, 748, 875
SfaNI GCATC 7 cut(s) 337, 703, 733, 849, 945, 1768, 1810
SfcI CTRYAG 1 cut(s) 206
SinI GGWCC 2 cut(s) 228, 792
SmiMI CAYNNNNRTG 3 cut(s) 497, 1199, 1224
SmlI CTYRAG 1 cut(s) 1028
SmoI CTYRAG 1 cut(s) 1028
SphI GCATGC 2 cut(s) 1410, 1736
Sse9I AATT 4 cut(s) 382, 1044, 1069, 1413
SseBI AGGCCT 1 cut(s) 973
SsiI CCGC 9 cut(s) 35, 216, 287, 333, 559, 740, 1125, 1488, 1696
SspMI CTAG 5 cut(s) 840, 909, 1014, 1331, 1846
StuI AGGCCT 1 cut(s) 973
StyD4I CCNGG 4 cut(s) 443, 485, 746, 873
StyI CCWWGG 4 cut(s) 118, 495, 1293, 1528
TaaI ACNGT 3 cut(s) 610, 1744, 1797
TaqI TCGA 7 cut(s) 150, 683, 698, 759, 1107, 1429, 1464
TaqII GACCGA 1 cut(s) 216
TasI AATT 4 cut(s) 382, 1044, 1069, 1413
TatI WGTACW 2 cut(s) 321, 387
TauI GCSGC 3 cut(s) 37, 336, 1128
TfiI GAWTC 3 cut(s) 276, 430, 1524
Tru1I TTAA 5 cut(s) 579, 1029, 1058, 1073, 1412
Tru9I TTAA 5 cut(s) 579, 1029, 1058, 1073, 1412
TscAI CASTG 2 cut(s) 804, 1747
TseI GCWGC 2 cut(s) 208, 1756
TspDTI ATGAA 4 cut(s) 845, 942, 1037, 1469
TspRI CASTG 2 cut(s) 804, 1747
Tth111I GACNNNGTC 1 cut(s) 1259
Van91I CCANNNNNTGG 1 cut(s) 1707
Vha464I CTTAAG 1 cut(s) 1028
VpaK11BI GGWCC 2 cut(s) 228, 792
XapI RAATTY 2 cut(s) 382, 1044
XceI RCATGY 4 cut(s) 1114, 1410, 1685, 1736
XspI CTAG 5 cut(s) 840, 909, 1014, 1331, 1846
Zsp2I ATGCAT 2 cut(s) 1408, 1507
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.