pycom07g15860
NAC Family

NAC domain protein, IPR003441 source

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
18364124 .. 18365245
1122 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g15860.5

Sequence Viewer

Length: 654 bp
ATGCACGAGCACTCTCTCATAGATAGTGAAGCCAATCCTAAACTGCCTCAGAAGGATTTCGTTATCTGTCGCATGAAGAAAAAATCCGAAGAGGAGGATACCTCAATCGGTGAAGTTGAACTTGGCAGCTGTAGTGTGTCTAATGTCGAAGATCATGCTGCAGCTGTTGTGACTCCAGGGTCACAGGATAACAGTTCCTCTACACTCCTATCATCAGGATACATAGAACTGGAAGATGTTCTGCAAGCCAATGGCATTAATGATGATTGTAATGAAATACAATCACCATTTGGAGATAATAATTATTCTTATAGCAATAAGAATGATATTTCAACCTGTGATGAAGGTGAACCTCATAGTTTCACCGTGTCTGTTTTCGAAAGTGAAGCTCTACATAATATTTCTCAAGAGTTATGTGCTCAGTCCCAAAAAAACATGGATTCACTCCGGTTACATGTCGTCCAAGAGTCATCAACATGTGTTGTATCCAAGAATAATGTTTCTACCAATGATAACGATGAACAATTTAAGAACATCGTTCCTAATTTTGAAAATCAAGTTACGAATAAAAGGATTTCTAACGTATGTCCTCCACCAGAAGAAGATCTGGAATTTTTCTTTTATCTACCTCAACTAGAGGACTACACACTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

218

Amino Acids

24.19

Weight (kDa)

4.27

Isoelectric Point (pI)

61.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000197)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18010 FvH4_7g18010 FvH4_7g18021 FvH4_7g18070 FvH4_7g18070 FvH4_7g18200 FvH4_7g18250
malus_domestica MD01G1092200.v1.1 MD01G1092500.v1.1 MD01G1092600.v1.1 MD01G1092900.v1.1 MD01G1093000.v1.1 MD01G1093200.v1.1 MD01G1093500.v1.1 MD01G1093700.v1.1 MD01G1093800.v1.1 MD01G1093900.v1.1 MD01G1094000.v1.1 MD01G1094200.v1.1 MD01G1094400.v1.1 MD01G1094500.v1.1 MD01G1094700.v1.1 MD01G1094800.v1.1 MD01G1095100.v1.1 MD07G1162700.v1.1 MD07G1163200.v1.1 MD07G1163400.v1.1 MD07G1163700.v1.1 MD07G1164000.v1.1 MD10G1186100.v1.1
prunus_persica Prupe.2G201200_v2.0.a1 Prupe.2G201200_v2.0.a1 Prupe.2G201300_v2.0.a1 Prupe.2G201800_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202800_v2.0.a1 Prupe.2G202900_v2.0.a1 Prupe.2G203000_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204900_v2.0.a1
pyrus_communis pycom01g11610 pycom01g11650 pycom01g11670 pycom01g11680 pycom01g11700 pycom01g11710 pycom01g11720 pycom01g11730 pycom07g15770 pycom07g15860 pycom07g15870 pycom07g15890 pycom07g15900 pycom07g15920
rosa_chinensis RchiOBHm_Chr1g0333731 RchiOBHm_Chr1g0361411 RchiOBHm_Chr1g0361501 RchiOBHm_Chr1g0361551 RchiOBHm_Chr1g0361631 RchiOBHm_Chr1g0361691 RchiOBHm_Chr1g0361701
rosa_laevigata RLG00000011640 RLG00000014882 RLG00000027709 RLG00000027713 RLG00000027717 RLG00000027719 RLG00000029532 RLG00000030171 RLG00000030174 RLG00000030177 RLG00000030181 RLG00000030186
rosa_multiflora Rmu_co8135790.1_g000001 Rmu_co8371689.1_g000001 Rmu_co8391943.1_g000001 Rmu_co8469521.1_g000001 Rmu_co8502503.1_g000002 Rmu_sc0001034.1_g000001 Rmu_sc0002119.1_g000002 Rmu_sc0002119.1_g000009 Rmu_sc0002119.1_g000019 Rmu_sc0003426.1_g000005 Rmu_sc0003693.1_g000010 Rmu_sc0003704.1_g000007 Rmu_sc0006101.1_g000005 Rmu_sc0006417.1_g000006 Rmu_sc0007217.1_g000012 Rmu_sc0010384.1_g000001 Rmu_sc0011258.1_g000003 Rmu_sc0017253.1_g000002 Rmu_ssc0000062.1_g000022
rosa_roxburghii Rroxscaffold_159G00432930 Rroxscaffold_159G00433040 Rroxscaffold_159G00433060 Rroxscaffold_4G00294780 Rroxscaffold_4G00294810 Rroxscaffold_4G00294870 Rroxscaffold_4G00294930 Rroxscaffold_4G00294950 Rroxscaffold_4G00317240 Rroxscaffold_4G00325190 Rroxscaffold_4G00325210
rosa_rugosa Rorug01G0047400 Rorug01G0047800 Rorug01G0048100 Rorug01G0048100 Rorug01G0111500 Rorug01G0111500 Rorug01G0289800 Rorug01G0290300 Rorug01G0290700 Rorug01G0290900
rosa_samantha Rh1AG063000 Rh1AG064000 Rh1AG064400 Rh1AG133700 Rh1AG300300 Rh1AG300900 Rh1AG301000 Rh1AG301100 Rh1BG263800 Rh1BG264000 Rh1BG264100 Rh1CG281800 Rh1CG282100 Rh1CG282200 Rh1DG294000 Rh1DG294100 Rh5BG200600
rosa_wichuraiana Rw1G005400 Rw1G011170 Rw1G026570 Rw1G026580 Rw1G026610 Rw1G026640 Rw1G026670 Rw1G026700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 178
AcsI RAATTY 1 cut(s) 611
AflIII ACRYGT 2 cut(s) 454, 476
AgsI TTSAA 3 cut(s) 119, 333, 551
AjnI CCWGG 1 cut(s) 175
AjuI GAANNNNNNNTTGG 2 cut(s) 105, 137
AluBI AGCT 3 cut(s) 129, 164, 389
AluI AGCT 3 cut(s) 129, 164, 389
Alw21I GWGCWC 2 cut(s) 12, 421
ApeKI GCWGC 3 cut(s) 126, 158, 161
ApoI RAATTY 1 cut(s) 611
AseI ATTAAT 1 cut(s) 258
Asp700I GAANNNNTTC 2 cut(s) 56, 237
AsuHPI GGTGA 4 cut(s) 122, 276, 355, 359
AsuII TTCGAA 1 cut(s) 378
BauI CACGAG 1 cut(s) 5
Bbv12I GWGCWC 2 cut(s) 12, 421
BbvI GCAGC 3 cut(s) 138, 145, 173
BcgI CGANNNNNNTGC 2 cut(s) 137, 171
BciT130I CCWGG 1 cut(s) 177
BciVI GTATCC 3 cut(s) 91, 212, 496
BfaI CTAG 1 cut(s) 635
BfmI CTRYAG 3 cut(s) 130, 159, 650
BfuI GTATCC 3 cut(s) 91, 212, 496
BglII AGATCT 1 cut(s) 604
BisI GCNGC 3 cut(s) 127, 159, 162
BlsI GCNGC 3 cut(s) 128, 160, 163
Bme1390I CCNGG 1 cut(s) 177
BmrFI CCNGG 1 cut(s) 177
BplI GAGNNNNNCTC 2 cut(s) 86, 118
BpmI CTGGAG 1 cut(s) 159
Bpu14I TTCGAA 1 cut(s) 378
BpuEI CTTGAG 1 cut(s) 390
BsaJI CCNNGG 1 cut(s) 176
BsaWI WCCGGW 1 cut(s) 447
Bse1I ACTGG 1 cut(s) 234
BseBI CCWGG 1 cut(s) 177
BseDI CCNNGG 1 cut(s) 176
BseMII CTCAG 2 cut(s) 62, 434
BseNI ACTGG 1 cut(s) 234
BseRI GAGGAG 1 cut(s) 107
BseXI GCAGC 3 cut(s) 138, 145, 173
BsiHKAI GWGCWC 2 cut(s) 12, 421
BsiSI CCGG 1 cut(s) 448
BslFI GGGAC 1 cut(s) 409
BsmFI GGGAC 1 cut(s) 409
Bsp119I TTCGAA 1 cut(s) 378
Bsp1286I GDGCHC 2 cut(s) 12, 421
Bsp143I GATC 2 cut(s) 151, 604
BspCNI CTCAG 2 cut(s) 61, 433
BspMAI CTGCAG 1 cut(s) 163
BspT104I TTCGAA 1 cut(s) 378
BsrI ACTGG 1 cut(s) 234
BssECI CCNNGG 1 cut(s) 176
BssMI GATC 2 cut(s) 151, 604
BssSI CACGAG 1 cut(s) 5
Bst2BI CACGAG 1 cut(s) 5
Bst2UI CCWGG 1 cut(s) 177
Bst4CI ACNGT 3 cut(s) 194, 367, 651
Bst6I CTCTTC 1 cut(s) 84
BstBI TTCGAA 1 cut(s) 378
BstC8I GCNNGC 1 cut(s) 246
BstDEI CTNAG 2 cut(s) 48, 420
BstKTI GATC 2 cut(s) 154, 607
BstMBI GATC 2 cut(s) 151, 604
BstNI CCWGG 1 cut(s) 177
BstNSI RCATGY 2 cut(s) 458, 480
BstSCI CCNGG 1 cut(s) 175
BstSFI CTRYAG 3 cut(s) 130, 159, 650
BstV1I GCAGC 3 cut(s) 138, 145, 173
BstX2I RGATCY 1 cut(s) 604
BstYI RGATCY 1 cut(s) 604
BsuI GTATCC 3 cut(s) 91, 212, 496
BtsIMutI CAGTG 1 cut(s) 647
Cac8I GCNNGC 1 cut(s) 246
CviAII CATG 5 cut(s) 73, 155, 436, 455, 477
CviJI RGCY 5 cut(s) 32, 129, 164, 248, 389
CviKI_1 RGCY 5 cut(s) 32, 129, 164, 248, 389
DdeI CTNAG 2 cut(s) 48, 420
DpnI GATC 2 cut(s) 153, 606
DpnII GATC 2 cut(s) 151, 604
DrdI GACNNNNNNGTC 1 cut(s) 178
DseDI GACNNNNNNGTC 1 cut(s) 178
Eam1104I CTCTTC 1 cut(s) 84
EarI CTCTTC 1 cut(s) 84
EcoRII CCWGG 1 cut(s) 175
FaeI CATG 5 cut(s) 76, 158, 439, 458, 480
FalI AAGNNNNNCTT 2 cut(s) 105, 137
FaqI GGGAC 1 cut(s) 409
FatI CATG 5 cut(s) 72, 154, 435, 454, 476
Fnu4HI GCNGC 3 cut(s) 127, 159, 162
Fsp4HI GCNGC 3 cut(s) 127, 159, 162
FspBI CTAG 1 cut(s) 635
GluI GCNGC 3 cut(s) 127, 159, 162
GsuI CTGGAG 1 cut(s) 159
HapII CCGG 1 cut(s) 448
Hin1II CATG 5 cut(s) 76, 158, 439, 458, 480
HinfI GANTC 3 cut(s) 172, 440, 467
HpaII CCGG 1 cut(s) 448
HphI GGTGA 4 cut(s) 122, 276, 355, 359
Hpy166II GTNNAC 1 cut(s) 350
Hpy188I TCNGA 2 cut(s) 51, 88
Hpy188III TCNNGA 3 cut(s) 216, 407, 608
Hpy8I GTNNAC 1 cut(s) 350
HpyAV CCTTC 2 cut(s) 46, 338
HpyCH4III ACNGT 3 cut(s) 194, 367, 651
HpyCH4IV ACGT 1 cut(s) 582
HpyCH4V TGCA 3 cut(s) 4, 161, 244
HpyF3I CTNAG 2 cut(s) 48, 420
HpySE526I ACGT 1 cut(s) 582
Hsp92II CATG 5 cut(s) 76, 158, 439, 458, 480
Kzo9I GATC 2 cut(s) 151, 604
LpnPI CCDG 9 cut(s) 162, 170, 189, 201, 215, 349, 461, 593, 609
Lsp1109I GCAGC 3 cut(s) 138, 145, 173
MaeI CTAG 1 cut(s) 635
MaeII ACGT 1 cut(s) 582
MaeIII GTNAC 4 cut(s) 169, 180, 450, 559
MalI GATC 2 cut(s) 153, 606
MboI GATC 2 cut(s) 151, 604
MboII GAAGA 6 cut(s) 88, 101, 161, 245, 611, 614
MflI RGATCY 1 cut(s) 604
MhlI GDGCHC 2 cut(s) 12, 421
MluCI AATT 4 cut(s) 301, 524, 544, 611
MlyI GAGTC 2 cut(s) 166, 476
MnlI CCTC 9 cut(s) 57, 85, 88, 112, 208, 363, 600, 631, 639
MroXI GAANNNNTTC 2 cut(s) 56, 237
MseI TTAA 2 cut(s) 258, 528
MslI CAYNNNNRTG 1 cut(s) 475
MspA1I CMGCKG 2 cut(s) 129, 164
MspI CCGG 1 cut(s) 448
MspR9I CCNGG 1 cut(s) 177
MvaI CCWGG 1 cut(s) 177
NdeII GATC 2 cut(s) 151, 604
NlaIII CATG 5 cut(s) 76, 158, 439, 458, 480
NmuCI GTSAC 2 cut(s) 169, 180
NspI RCATGY 2 cut(s) 458, 480
NspV TTCGAA 1 cut(s) 378
PciI ACATGT 2 cut(s) 454, 476
PdmI GAANNNNTTC 2 cut(s) 56, 237
PfeI GAWTC 1 cut(s) 440
PkrI GCNGC 3 cut(s) 128, 160, 163
PleI GAGTC 2 cut(s) 166, 475
PpsI GAGTC 2 cut(s) 166, 475
PscI ACATGT 2 cut(s) 454, 476
PshBI ATTAAT 1 cut(s) 258
Psp6I CCWGG 1 cut(s) 175
PspGI CCWGG 1 cut(s) 175
PstI CTGCAG 1 cut(s) 163
PsuI RGATCY 1 cut(s) 604
PvuII CAGCTG 2 cut(s) 129, 164
RseI CAYNNNNRTG 1 cut(s) 475
SaqAI TTAA 2 cut(s) 258, 528
SatI GCNGC 3 cut(s) 127, 159, 162
Sau3AI GATC 2 cut(s) 151, 604
SchI GAGTC 2 cut(s) 166, 476
ScrFI CCNGG 1 cut(s) 177
SduI GDGCHC 2 cut(s) 12, 421
SetI ASST 9 cut(s) 104, 131, 166, 338, 349, 355, 391, 585, 631
SfcI CTRYAG 3 cut(s) 130, 159, 650
SfuI TTCGAA 1 cut(s) 378
SmiMI CAYNNNNRTG 1 cut(s) 475
SmlI CTYRAG 1 cut(s) 405
SmoI CTYRAG 1 cut(s) 405
Sse9I AATT 4 cut(s) 301, 524, 544, 611
SspI AATATT 1 cut(s) 400
SspMI CTAG 1 cut(s) 635
StyD4I CCNGG 1 cut(s) 175
TaaI ACNGT 3 cut(s) 194, 367, 651
TaiI ACGT 1 cut(s) 585
TaqI TCGA 2 cut(s) 147, 378
TasI AATT 4 cut(s) 301, 524, 544, 611
TfiI GAWTC 1 cut(s) 440
Tru1I TTAA 2 cut(s) 258, 528
Tru9I TTAA 2 cut(s) 258, 528
TscAI CASTG 1 cut(s) 654
TseFI GTSAC 2 cut(s) 169, 180
TseI GCWGC 3 cut(s) 126, 158, 161
Tsp45I GTSAC 2 cut(s) 169, 180
TspDTI ATGAA 4 cut(s) 89, 288, 357, 534
TspRI CASTG 1 cut(s) 654
VspI ATTAAT 1 cut(s) 258
XapI RAATTY 1 cut(s) 611
XceI RCATGY 2 cut(s) 458, 480
XmnI GAANNNNTTC 2 cut(s) 56, 237
XspI CTAG 1 cut(s) 635
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.