MD01G1094500.v1.1
NAC Family

NAC domain-containing protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Reverse (-)
20967046 .. 20969688
2643 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1094500.v1.1.491

Sequence Viewer

Length: 801 bp
ATGGCTCCCAATGGAAGCCGCTTCACCAGAGCATCAGCAGGTGACATATTGGTGCCAGTGGGATTCCGATTCCGCCCCACAGAAGAAGAGCTGGTCCACTATTACTTGCAGATGAAGCTCGAGGGAATGGATTACATTGTCAGCGACGTCGTCAGTGAAATCGATATCTGCAACCACGAGCCAAGGGACTTGCCTGGGCTTTCACTCGTAAAGTCGGATGATCAAGAATGGTACTTGTTCAGCACTTACAAAAAAAACAGCAAAAACCAGATCGTAAGGGCGACGAAGGAAGGCTTCTGGAAGGTCACTGGTGAGCGAAAACAGGTCAAGACTAAAGACAAAAGAAGTGTCATTGGTGAAAAAAGGATTCTAACTTTTAAGCAAGGTCGTGTTCGGAATCCCCAAAATACCGACTGGGTTATGCATGAGTATTACATCCCCAAACCAATCCTAATGATAATCAGGGATTTAGTTGTCTGTTGCGTAAAGAAGAAATCAGGTGAGAATGTGGATGCTGCAAACTGTCATGAACGTGAATCTAGTACTTACAACAACAATGCATCTGATTTTGAAAACCAACAGCTACTAGCACCTGGTATGGATATTGAAGAGCTTTTTTCGGACCGGGCCGTGGCCCAGTGCGACCGTCCAGGGTCCAAAAAAATTGGGGGCACCAAATATATTAAAGAGGATGTTTTGAGGCGCGAGGCCAACAGGAGTGCTGGTGGTATTCCATTTATGTATCTTCTTCTAGTTGGCTTGATTGGCATTATTTTGGGGTACATTCTGAAGAAGACATGA

Protein Analysis

267

Amino Acids

30.39

Weight (kDa)

8.93

Isoelectric Point (pI)

41.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 19 - 145 6.7e-35 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000197)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18010 FvH4_7g18010 FvH4_7g18021 FvH4_7g18070 FvH4_7g18070 FvH4_7g18200 FvH4_7g18250
malus_domestica MD01G1092200.v1.1 MD01G1092500.v1.1 MD01G1092600.v1.1 MD01G1092900.v1.1 MD01G1093000.v1.1 MD01G1093200.v1.1 MD01G1093500.v1.1 MD01G1093700.v1.1 MD01G1093800.v1.1 MD01G1093900.v1.1 MD01G1094000.v1.1 MD01G1094200.v1.1 MD01G1094400.v1.1 MD01G1094500.v1.1 MD01G1094700.v1.1 MD01G1094800.v1.1 MD01G1095100.v1.1 MD07G1162700.v1.1 MD07G1163200.v1.1 MD07G1163400.v1.1 MD07G1163700.v1.1 MD07G1164000.v1.1 MD10G1186100.v1.1
prunus_persica Prupe.2G201200_v2.0.a1 Prupe.2G201200_v2.0.a1 Prupe.2G201300_v2.0.a1 Prupe.2G201800_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202800_v2.0.a1 Prupe.2G202900_v2.0.a1 Prupe.2G203000_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204900_v2.0.a1
pyrus_communis pycom01g11610 pycom01g11650 pycom01g11670 pycom01g11680 pycom01g11700 pycom01g11710 pycom01g11720 pycom01g11730 pycom07g15770 pycom07g15860 pycom07g15870 pycom07g15890 pycom07g15900 pycom07g15920
rosa_chinensis RchiOBHm_Chr1g0333731 RchiOBHm_Chr1g0361411 RchiOBHm_Chr1g0361501 RchiOBHm_Chr1g0361551 RchiOBHm_Chr1g0361631 RchiOBHm_Chr1g0361691 RchiOBHm_Chr1g0361701
rosa_laevigata RLG00000011640 RLG00000014882 RLG00000027709 RLG00000027713 RLG00000027717 RLG00000027719 RLG00000029532 RLG00000030171 RLG00000030174 RLG00000030177 RLG00000030181 RLG00000030186
rosa_multiflora Rmu_co8135790.1_g000001 Rmu_co8371689.1_g000001 Rmu_co8391943.1_g000001 Rmu_co8469521.1_g000001 Rmu_co8502503.1_g000002 Rmu_sc0001034.1_g000001 Rmu_sc0002119.1_g000002 Rmu_sc0002119.1_g000009 Rmu_sc0002119.1_g000019 Rmu_sc0003426.1_g000005 Rmu_sc0003693.1_g000010 Rmu_sc0003704.1_g000007 Rmu_sc0006101.1_g000005 Rmu_sc0006417.1_g000006 Rmu_sc0007217.1_g000012 Rmu_sc0010384.1_g000001 Rmu_sc0011258.1_g000003 Rmu_sc0017253.1_g000002 Rmu_ssc0000062.1_g000022
rosa_roxburghii Rroxscaffold_159G00432930 Rroxscaffold_159G00433040 Rroxscaffold_159G00433060 Rroxscaffold_4G00294780 Rroxscaffold_4G00294810 Rroxscaffold_4G00294870 Rroxscaffold_4G00294930 Rroxscaffold_4G00294950 Rroxscaffold_4G00317240 Rroxscaffold_4G00325190 Rroxscaffold_4G00325210
rosa_rugosa Rorug01G0047400 Rorug01G0047800 Rorug01G0048100 Rorug01G0048100 Rorug01G0111500 Rorug01G0111500 Rorug01G0289800 Rorug01G0290300 Rorug01G0290700 Rorug01G0290900
rosa_samantha Rh1AG063000 Rh1AG064000 Rh1AG064400 Rh1AG133700 Rh1AG300300 Rh1AG300900 Rh1AG301000 Rh1AG301100 Rh1BG263800 Rh1BG264000 Rh1BG264100 Rh1CG281800 Rh1CG282100 Rh1CG282200 Rh1DG294000 Rh1DG294100 Rh5BG200600
rosa_wichuraiana Rw1G005400 Rw1G011170 Rw1G026570 Rw1G026580 Rw1G026610 Rw1G026640 Rw1G026670 Rw1G026700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 29
AatII GACGTC 1 cut(s) 150
Acc36I ACCTGC 1 cut(s) 29
AccB1I GGYRCC 2 cut(s) 52, 671
AccII CGCG 1 cut(s) 705
AciI CCGC 2 cut(s) 19, 73
AcyI GRCGYC 1 cut(s) 147
AfaI GTAC 3 cut(s) 233, 544, 782
AfiI CCNNNNNNNGG 1 cut(s) 631
AgsI TTSAA 2 cut(s) 572, 608
AjnI CCWGG 3 cut(s) 193, 592, 649
AluBI AGCT 4 cut(s) 91, 118, 583, 613
AluI AGCT 4 cut(s) 91, 118, 583, 613
Ama87I CYCGRG 1 cut(s) 119
AoxI GGCC 3 cut(s) 627, 633, 708
ApeKI GCWGC 1 cut(s) 515
ArsI GACNNNNNNTTYG 2 cut(s) 333, 365
AspLEI GCGC 1 cut(s) 705
AspS9I GGNCC 5 cut(s) 94, 622, 627, 634, 654
AsuC2I CCSGG 1 cut(s) 626
AsuHPI GGTGA 5 cut(s) 16, 53, 323, 368, 512
AvaI CYCGRG 1 cut(s) 119
AvaII GGWCC 3 cut(s) 94, 622, 654
BaeGI GKGCMC 1 cut(s) 674
BanI GGYRCC 2 cut(s) 52, 671
BauI CACGAG 1 cut(s) 176
BbvI GCAGC 1 cut(s) 502
BceAI ACGGC 1 cut(s) 614
BciT130I CCWGG 3 cut(s) 195, 594, 651
BclI TGATCA 1 cut(s) 220
BcnI CCSGG 1 cut(s) 626
BfaI CTAG 3 cut(s) 540, 587, 752
BfuAI ACCTGC 1 cut(s) 29
BisI GCNGC 2 cut(s) 19, 516
BlsI GCNGC 2 cut(s) 20, 517
BmcAI AGTACT 1 cut(s) 544
Bme1390I CCNGG 4 cut(s) 195, 594, 626, 651
Bme18I GGWCC 3 cut(s) 94, 622, 654
BmeT110I CYCGRG 1 cut(s) 119
BmgT120I GGNCC 5 cut(s) 94, 622, 627, 634, 654
BmiI GGNNCC 4 cut(s) 6, 54, 655, 673
BmrFI CCNGG 4 cut(s) 195, 594, 626, 651
BmrI ACTGGG 2 cut(s) 424, 631
BmsI GCATC 3 cut(s) 41, 502, 569
BmuI ACTGGG 2 cut(s) 424, 631
BpuMI CCSGG 1 cut(s) 626
Bsa29I ATCGAT 1 cut(s) 162
BsaHI GRCGYC 1 cut(s) 147
BsaJI CCNNGG 4 cut(s) 182, 194, 630, 650
BsaXI ACNNNNNCTCC 2 cut(s) 709, 739
Bsc4I CCNNNNNNNGG 1 cut(s) 631
Bse1I ACTGG 4 cut(s) 56, 313, 419, 637
BseBI CCWGG 3 cut(s) 195, 594, 651
BseCI ATCGAT 1 cut(s) 162
BseDI CCNNGG 4 cut(s) 182, 194, 630, 650
BseGI GGATG 4 cut(s) 223, 435, 517, 697
BseLI CCNNNNNNNGG 1 cut(s) 631
BseNI ACTGG 4 cut(s) 56, 313, 419, 637
BseSI GKGCMC 1 cut(s) 674
BseXI GCAGC 1 cut(s) 502
Bsh1236I CGCG 1 cut(s) 705
Bsh1285I CGRYCG 1 cut(s) 646
BshFI GGCC 3 cut(s) 629, 635, 710
BshNI GGYRCC 2 cut(s) 52, 671
BshVI ATCGAT 1 cut(s) 162
BsiEI CGRYCG 1 cut(s) 646
BsiHKCI CYCGRG 1 cut(s) 119
BsiSI CCGG 1 cut(s) 625
BslFI GGGAC 1 cut(s) 200
BslI CCNNNNNNNGG 1 cut(s) 631
BsmFI GGGAC 1 cut(s) 200
BsnI GGCC 3 cut(s) 629, 635, 710
BsoBI CYCGRG 1 cut(s) 119
Bsp1286I GDGCHC 1 cut(s) 674
Bsp143I GATC 2 cut(s) 220, 270
BspACI CCGC 2 cut(s) 19, 73
BspANI GGCC 3 cut(s) 629, 635, 710
BspDI ATCGAT 1 cut(s) 162
BspFNI CGCG 1 cut(s) 705
BspHI TCATGA 1 cut(s) 526
BspLI GGNNCC 4 cut(s) 6, 54, 655, 673
BspMI ACCTGC 1 cut(s) 29
BspQI GCTCTTC 2 cut(s) 81, 603
BspT107I GGYRCC 2 cut(s) 52, 671
BsrI ACTGG 4 cut(s) 56, 313, 419, 637
BssECI CCNNGG 4 cut(s) 182, 194, 630, 650
BssMI GATC 2 cut(s) 220, 270
BssNI GRCGYC 1 cut(s) 147
BssSI CACGAG 1 cut(s) 176
BssT1I CCWWGG 1 cut(s) 182
Bst2BI CACGAG 1 cut(s) 176
Bst2UI CCWGG 3 cut(s) 195, 594, 651
Bst4CI ACNGT 2 cut(s) 524, 647
Bst6I CTCTTC 2 cut(s) 81, 603
BstACI GRCGYC 1 cut(s) 147
BstDSI CCRYGG 1 cut(s) 630
BstF5I GGATG 4 cut(s) 223, 435, 517, 697
BstFNI CGCG 1 cut(s) 705
BstHHI GCGC 1 cut(s) 705
BstKTI GATC 2 cut(s) 223, 273
BstMBI GATC 2 cut(s) 220, 270
BstMCI CGRYCG 1 cut(s) 646
BstMWI GCNNNNNNNGC 2 cut(s) 115, 765
BstNI CCWGG 3 cut(s) 195, 594, 651
BstSCI CCNGG 4 cut(s) 193, 592, 624, 649
BstSLI GKGCMC 1 cut(s) 674
BstUI CGCG 1 cut(s) 705
BstV1I GCAGC 1 cut(s) 502
Bsu15I ATCGAT 1 cut(s) 162
BsuRI GGCC 3 cut(s) 629, 635, 710
BsuTUI ATCGAT 1 cut(s) 162
BtgI CCRYGG 1 cut(s) 630
BtsCI GGATG 4 cut(s) 223, 435, 517, 697
BtsIMutI CAGTG 4 cut(s) 63, 160, 306, 644
BveI ACCTGC 1 cut(s) 29
CciI TCATGA 1 cut(s) 526
CfoI GCGC 1 cut(s) 705
Cfr13I GGNCC 5 cut(s) 94, 622, 627, 634, 654
ClaI ATCGAT 1 cut(s) 162
CpoI CGGWCCG 1 cut(s) 622
CsiI ACCWGGT 1 cut(s) 592
Csp6I GTAC 3 cut(s) 232, 543, 781
CspI CGGWCCG 1 cut(s) 622
CviAII CATG 3 cut(s) 425, 527, 798
CviQI GTAC 3 cut(s) 232, 543, 781
DpnI GATC 2 cut(s) 222, 272
DpnII GATC 2 cut(s) 220, 270
Eam1104I CTCTTC 2 cut(s) 81, 603
EarI CTCTTC 2 cut(s) 81, 603
EciI GGCGGA 1 cut(s) 62
Eco130I CCWWGG 1 cut(s) 182
Eco32I GATATC 1 cut(s) 166
Eco47I GGWCC 3 cut(s) 94, 622, 654
Eco88I CYCGRG 1 cut(s) 119
EcoRII CCWGG 3 cut(s) 193, 592, 649
EcoRV GATATC 1 cut(s) 166
EcoT14I CCWWGG 1 cut(s) 182
EcoT22I ATGCAT 2 cut(s) 426, 562
ErhI CCWWGG 1 cut(s) 182
FaeI CATG 3 cut(s) 428, 530, 801
FaiI YATR 8 cut(s) 47, 422, 426, 528, 599, 681, 740, 799
FalI AAGNNNNNCTT 2 cut(s) 278, 310
FaqI GGGAC 1 cut(s) 200
FatI CATG 3 cut(s) 424, 526, 797
FbaI TGATCA 1 cut(s) 220
Fnu4HI GCNGC 2 cut(s) 19, 516
FokI GGATG 4 cut(s) 230, 422, 524, 704
Fsp4HI GCNGC 2 cut(s) 19, 516
FspBI CTAG 3 cut(s) 540, 587, 752
GlaI GCGC 1 cut(s) 704
GluI GCNGC 2 cut(s) 19, 516
HaeIII GGCC 3 cut(s) 629, 635, 710
HapII CCGG 1 cut(s) 625
HhaI GCGC 1 cut(s) 705
Hin1I GRCGYC 1 cut(s) 147
Hin1II CATG 3 cut(s) 428, 530, 801
Hin6I GCGC 1 cut(s) 703
HinP1I GCGC 1 cut(s) 703
HinfI GANTC 5 cut(s) 63, 69, 367, 397, 536
HpaII CCGG 1 cut(s) 625
HphI GGTGA 5 cut(s) 16, 53, 323, 368, 512
Hpy166II GTNNAC 1 cut(s) 97
Hpy188I TCNGA 6 cut(s) 68, 217, 396, 565, 622, 789
Hpy188III TCNNGA 4 cut(s) 224, 298, 328, 527
Hpy8I GTNNAC 1 cut(s) 97
Hpy99I CGWCG 3 cut(s) 149, 152, 286
HpyAV CCTTC 3 cut(s) 280, 284, 295
HpyCH4III ACNGT 2 cut(s) 524, 647
HpyCH4IV ACGT 2 cut(s) 147, 532
HpyCH4V TGCA 5 cut(s) 109, 171, 424, 518, 560
HpyF10VI GCNNNNNNNGC 2 cut(s) 115, 765
HpySE526I ACGT 2 cut(s) 147, 532
Hsp92I GRCGYC 1 cut(s) 147
Hsp92II CATG 3 cut(s) 428, 530, 801
HspAI GCGC 1 cut(s) 703
Ksp22I TGATCA 1 cut(s) 220
Kzo9I GATC 2 cut(s) 220, 270
LguI GCTCTTC 2 cut(s) 81, 603
LmnI GCTCC 1 cut(s) 10
Lsp1109I GCAGC 1 cut(s) 502
LweI GCATC 3 cut(s) 41, 502, 569
MabI ACCWGGT 1 cut(s) 592
MaeI CTAG 3 cut(s) 540, 587, 752
MaeII ACGT 2 cut(s) 147, 532
MaeIII GTNAC 2 cut(s) 41, 304
MalI GATC 2 cut(s) 222, 272
MboI GATC 2 cut(s) 220, 270
MboII GAAGA 6 cut(s) 95, 98, 502, 620, 737, 740
MhlI GDGCHC 1 cut(s) 674
MluCI AATT 1 cut(s) 663
MmeI TCCRAC 1 cut(s) 195
MnlI CCTC 4 cut(s) 115, 682, 693, 700
Mph1103I ATGCAT 2 cut(s) 426, 562
MseI TTAA 2 cut(s) 378, 684
MslI CAYNNNNRTG 2 cut(s) 50, 531
MspI CCGG 1 cut(s) 625
MspR9I CCNGG 4 cut(s) 195, 594, 626, 651
MvaI CCWGG 3 cut(s) 195, 594, 651
MvnI CGCG 1 cut(s) 705
MwoI GCNNNNNNNGC 2 cut(s) 115, 765
NciI CCSGG 1 cut(s) 626
NdeII GATC 2 cut(s) 220, 270
NlaIII CATG 3 cut(s) 428, 530, 801
NlaIV GGNNCC 4 cut(s) 6, 54, 655, 673
NmuCI GTSAC 2 cut(s) 41, 304
NsiI ATGCAT 2 cut(s) 426, 562
PaeR7I CTCGAG 1 cut(s) 119
PagI TCATGA 1 cut(s) 526
PaqCI CACCTGC 1 cut(s) 29
PciSI GCTCTTC 2 cut(s) 81, 603
PfeI GAWTC 5 cut(s) 63, 69, 367, 397, 536
PflFI GACNNNGTC 1 cut(s) 149
PkrI GCNGC 2 cut(s) 20, 517
Psp6I CCWGG 3 cut(s) 193, 592, 649
PspGI CCWGG 3 cut(s) 193, 592, 649
PspN4I GGNNCC 4 cut(s) 6, 54, 655, 673
PspPI GGNCC 5 cut(s) 94, 622, 627, 634, 654
PspXI VCTCGAGB 1 cut(s) 119
PsyI GACNNNGTC 1 cut(s) 149
RsaI GTAC 3 cut(s) 233, 544, 782
RsaNI GTAC 3 cut(s) 232, 543, 781
RseI CAYNNNNRTG 2 cut(s) 50, 531
Rsr2I CGGWCCG 1 cut(s) 622
RsrII CGGWCCG 1 cut(s) 622
SapI GCTCTTC 2 cut(s) 81, 603
SaqAI TTAA 2 cut(s) 378, 684
SatI GCNGC 2 cut(s) 19, 516
Sau3AI GATC 2 cut(s) 220, 270
Sau96I GGNCC 5 cut(s) 94, 622, 627, 634, 654
ScaI AGTACT 1 cut(s) 544
ScrFI CCNGG 4 cut(s) 195, 594, 626, 651
SduI GDGCHC 1 cut(s) 674
SexAI ACCWGGT 1 cut(s) 592
SfaNI GCATC 3 cut(s) 41, 502, 569
Sfr274I CTCGAG 1 cut(s) 119
SinI GGWCC 3 cut(s) 94, 622, 654
SlaI CTCGAG 1 cut(s) 119
SmiMI CAYNNNNRTG 2 cut(s) 50, 531
SmlI CTYRAG 1 cut(s) 119
SmoI CTYRAG 1 cut(s) 119
Sse9I AATT 1 cut(s) 663
SsiI CCGC 2 cut(s) 19, 73
SspMI CTAG 3 cut(s) 540, 587, 752
StyD4I CCNGG 4 cut(s) 193, 592, 624, 649
StyI CCWWGG 1 cut(s) 182
TaaI ACNGT 2 cut(s) 524, 647
TaiI ACGT 2 cut(s) 150, 535
TaqI TCGA 2 cut(s) 120, 162
TasI AATT 1 cut(s) 663
TatI WGTACW 1 cut(s) 542
TauI GCSGC 1 cut(s) 21
TfiI GAWTC 5 cut(s) 63, 69, 367, 397, 536
Tru1I TTAA 2 cut(s) 378, 684
Tru9I TTAA 2 cut(s) 378, 684
TscAI CASTG 4 cut(s) 63, 160, 313, 644
TseFI GTSAC 2 cut(s) 41, 304
TseI GCWGC 1 cut(s) 515
Tsp45I GTSAC 2 cut(s) 41, 304
TspDTI ATGAA 2 cut(s) 128, 543
TspRI CASTG 4 cut(s) 63, 160, 313, 644
Tth111I GACNNNGTC 1 cut(s) 149
VpaK11BI GGWCC 3 cut(s) 94, 622, 654
XhoI CTCGAG 1 cut(s) 119
XspI CTAG 3 cut(s) 540, 587, 752
ZraI GACGTC 1 cut(s) 148
ZrmI AGTACT 1 cut(s) 544
Zsp2I ATGCAT 2 cut(s) 426, 562
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.