Rorug01G0289800
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000197
Physical Location & Seq
Reverse (-)
40518888 .. 40520163
1276 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0289800.1

Sequence Viewer

Length: 1173 bp
ATGGCCGCCGCTTCGTTCCGGACTCGTCCACTTCATCTCGCTCAATTTCACTCCGAAACCAAAACCCTAATCCCAATTCGCCCCAAATTTACCAGACCGCTAGGGTTTTCCGGCGGCCGTCCAAGTACTAGTTCCAGATCAACGACCCAGGGACCCATTTCCAGAGCTTCAATTCTTCGACTTTGGATTTGGGGGTACTTGATTTGGGTCGGTACTGGAAAGCTTGTAATTCGATTTGTTCCTGATAAAAAGTCGAGCTTTGCGTTTGTGAATGCGATTGAGGTCGTTTCTGCACCAAAGGACCTTGTTGCTGATACTGCAATGTATGTGGGTAATGGGAAAGTTGTGGGTTTTGATGGGTTGGCCAAGGAAGCTCTACAAGTTGTGCATAGGGTTAATGTGGGAGGTCATAAAGTGACGCCCTTTAATGATAGTCTGTGGAGGACTTGGATTACTGATGAGGAGTTTTTCAATTCGGGTTTCGGGTCGGAGAGGGTTTATTTTGGGGGGCGGATTAAGTATCAAGATGGAGGGGCTAGCCGGGAAATTGGCCCGGATAATGTGTACAACACTGCAAGATTGATTCGTAGTACGAATGCTTCGATTCCCAATGTGAATATGACATGGGTGTTTCCTGCAGTGGGTGGGTATAAGTATTTGGTTCGGATGCATTTCTGTGATTTTGCTAGTACTTCGCTTGGTTTGCTGTATTTCAATGTTTATGTGAATGGGAATTTGGCGTATGAAGATTTGGATTTGTCCAAGGCTGCAAATTATATGTTGGCTTCTCCGTTCTATGCGGATTTTGTGGTTGATGGAGATGATTCGGATTCTTTGACTGTAAGTGTAGGACCATCGAACGCTAGCGTGCCATACGCCATTGATGGTATATTGAATGGTATTGAGATCATGAAGTTGAATAACTCAGTTGGGAGTCTTGATGGCGAGCATTGTGCAGAGTGGGTTTTGAGGAGTTGGCCAAAAGGACATGTTAGTCTCTTGGTTCCTCTAGTTGCTGCTGCTTGTGTGCTGCTAAGCTTATCTATGGTTACGCGTAGGAGGATCATGATGAAGAAGGAATCTGTGGCATGGACAAAACTGCCTGTGGATGTTTCAGAAGTTAATGCCAAGCATGGAAATATACATCAATCGGATAAATTGGAAAGCACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

390

Amino Acids

42.9

Weight (kDa)

9.07

Isoelectric Point (pI)

37.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 74 - 305 4.6e-17 Malectin-like domain
Malectin PF11721 129 - 266 4.3e-07 Malectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000197)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18010 FvH4_7g18010 FvH4_7g18021 FvH4_7g18070 FvH4_7g18070 FvH4_7g18200 FvH4_7g18250
malus_domestica MD01G1092200.v1.1 MD01G1092500.v1.1 MD01G1092600.v1.1 MD01G1092900.v1.1 MD01G1093000.v1.1 MD01G1093200.v1.1 MD01G1093500.v1.1 MD01G1093700.v1.1 MD01G1093800.v1.1 MD01G1093900.v1.1 MD01G1094000.v1.1 MD01G1094200.v1.1 MD01G1094400.v1.1 MD01G1094500.v1.1 MD01G1094700.v1.1 MD01G1094800.v1.1 MD01G1095100.v1.1 MD07G1162700.v1.1 MD07G1163200.v1.1 MD07G1163400.v1.1 MD07G1163700.v1.1 MD07G1164000.v1.1 MD10G1186100.v1.1
prunus_persica Prupe.2G201200_v2.0.a1 Prupe.2G201200_v2.0.a1 Prupe.2G201300_v2.0.a1 Prupe.2G201800_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202800_v2.0.a1 Prupe.2G202900_v2.0.a1 Prupe.2G203000_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204900_v2.0.a1
pyrus_communis pycom01g11610 pycom01g11650 pycom01g11670 pycom01g11680 pycom01g11700 pycom01g11710 pycom01g11720 pycom01g11730 pycom07g15770 pycom07g15860 pycom07g15870 pycom07g15890 pycom07g15900 pycom07g15920
rosa_chinensis RchiOBHm_Chr1g0333731 RchiOBHm_Chr1g0361411 RchiOBHm_Chr1g0361501 RchiOBHm_Chr1g0361551 RchiOBHm_Chr1g0361631 RchiOBHm_Chr1g0361691 RchiOBHm_Chr1g0361701
rosa_laevigata RLG00000011640 RLG00000014882 RLG00000027709 RLG00000027713 RLG00000027717 RLG00000027719 RLG00000029532 RLG00000030171 RLG00000030174 RLG00000030177 RLG00000030181 RLG00000030186
rosa_multiflora Rmu_co8135790.1_g000001 Rmu_co8371689.1_g000001 Rmu_co8391943.1_g000001 Rmu_co8469521.1_g000001 Rmu_co8502503.1_g000002 Rmu_sc0001034.1_g000001 Rmu_sc0002119.1_g000002 Rmu_sc0002119.1_g000009 Rmu_sc0002119.1_g000019 Rmu_sc0003426.1_g000005 Rmu_sc0003693.1_g000010 Rmu_sc0003704.1_g000007 Rmu_sc0006101.1_g000005 Rmu_sc0006417.1_g000006 Rmu_sc0007217.1_g000012 Rmu_sc0010384.1_g000001 Rmu_sc0011258.1_g000003 Rmu_sc0017253.1_g000002 Rmu_ssc0000062.1_g000022
rosa_roxburghii Rroxscaffold_159G00432930 Rroxscaffold_159G00433040 Rroxscaffold_159G00433060 Rroxscaffold_4G00294780 Rroxscaffold_4G00294810 Rroxscaffold_4G00294870 Rroxscaffold_4G00294930 Rroxscaffold_4G00294950 Rroxscaffold_4G00317240 Rroxscaffold_4G00325190 Rroxscaffold_4G00325210
rosa_rugosa Rorug01G0047400 Rorug01G0047800 Rorug01G0048100 Rorug01G0048100 Rorug01G0111500 Rorug01G0111500 Rorug01G0289800 Rorug01G0290300 Rorug01G0290700 Rorug01G0290900
rosa_samantha Rh1AG063000 Rh1AG064000 Rh1AG064400 Rh1AG133700 Rh1AG300300 Rh1AG300900 Rh1AG301000 Rh1AG301100 Rh1BG263800 Rh1BG264000 Rh1BG264100 Rh1CG281800 Rh1CG282100 Rh1CG282200 Rh1DG294000 Rh1DG294100 Rh5BG200600
rosa_wichuraiana Rw1G005400 Rw1G011170 Rw1G026570 Rw1G026580 Rw1G026610 Rw1G026640 Rw1G026670 Rw1G026700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 993
AccII CGCG 1 cut(s) 1054
AccIII TCCGGA 1 cut(s) 18
AciI CCGC 6 cut(s) 6, 9, 98, 114, 511, 800
AclWI GGATC 1 cut(s) 1070
AcoI YGGCCR 4 cut(s) 3, 115, 363, 977
AcsI RAATTY 2 cut(s) 86, 733
AcyI GRCGYC 1 cut(s) 419
AfaI GTAC 6 cut(s) 127, 197, 214, 566, 592, 691
AfiI CCNNNNNNNGG 1 cut(s) 641
AflIII ACRYGT 2 cut(s) 988, 1052
AgsI TTSAA 5 cut(s) 171, 472, 715, 895, 919
AhlI ACTAGT 1 cut(s) 128
AjnI CCWGG 1 cut(s) 147
AjuI GAANNNNNNNTTGG 4 cut(s) 115, 147, 719, 751
AluBI AGCT 5 cut(s) 167, 223, 258, 374, 1038
AluI AGCT 5 cut(s) 167, 223, 258, 374, 1038
Alw26I GTCTC 1 cut(s) 1001
AlwI GGATC 1 cut(s) 1070
Aor13HI TCCGGA 1 cut(s) 18
AoxI GGCC 5 cut(s) 3, 115, 363, 550, 977
ApeKI GCWGC 4 cut(s) 767, 1016, 1019, 1030
ApoI RAATTY 2 cut(s) 86, 733
ArsI GACNNNNNNTTYG 2 cut(s) 171, 203
AspS9I GGNCC 4 cut(s) 152, 301, 551, 851
AsuC2I CCSGG 2 cut(s) 542, 554
AsuNHI GCTAGC 2 cut(s) 536, 863
AvaII GGWCC 3 cut(s) 152, 301, 851
BalI TGGCCA 2 cut(s) 365, 979
BarI GAAGNNNNNNTAC 2 cut(s) 583, 615
BbvI GCAGC 4 cut(s) 754, 1003, 1006, 1017
BccI CCATC 6 cut(s) 350, 521, 809, 862, 878, 935
BceAI ACGGC 1 cut(s) 102
BcgI CGANNNNNNTGC 2 cut(s) 935, 969
BciT130I CCWGG 1 cut(s) 149
BcnI CCSGG 2 cut(s) 542, 554
BcoDI GTCTC 1 cut(s) 1001
BcuI ACTAGT 1 cut(s) 128
BfaI CTAG 6 cut(s) 101, 129, 537, 687, 864, 1010
BfmI CTRYAG 1 cut(s) 636
BisI GCNGC 7 cut(s) 6, 9, 115, 768, 1017, 1020, 1031
BlpI GCTNAGC 1 cut(s) 1034
BlsI GCNGC 7 cut(s) 7, 10, 116, 769, 1018, 1021, 1032
BmcAI AGTACT 2 cut(s) 127, 691
Bme1390I CCNGG 3 cut(s) 149, 542, 554
Bme18I GGWCC 3 cut(s) 152, 301, 851
BmgT120I GGNCC 4 cut(s) 152, 301, 551, 851
BmiI GGNNCC 3 cut(s) 153, 154, 1005
BmrFI CCNGG 3 cut(s) 149, 542, 554
BmsI GCATC 1 cut(s) 657
BmtI GCTAGC 2 cut(s) 540, 867
Bpu1102I GCTNAGC 1 cut(s) 1034
BpuMI CCSGG 2 cut(s) 542, 554
BsaHI GRCGYC 1 cut(s) 419
BsaJI CCNNGG 4 cut(s) 147, 148, 366, 762
BsaWI WCCGGW 1 cut(s) 18
Bsc4I CCNNNNNNNGG 1 cut(s) 641
Bse1I ACTGG 1 cut(s) 220
Bse3DI GCAATG 1 cut(s) 327
BseAI TCCGGA 1 cut(s) 18
BseBI CCWGG 1 cut(s) 149
BseDI CCNNGG 4 cut(s) 147, 148, 366, 762
BseGI GGATG 2 cut(s) 672, 1114
BseLI CCNNNNNNNGG 1 cut(s) 641
BseMI GCAATG 1 cut(s) 327
BseMII CTCAG 1 cut(s) 939
BseNI ACTGG 1 cut(s) 220
BseRI GAGGAG 2 cut(s) 476, 985
BseX3I CGGCCG 1 cut(s) 115
BseXI GCAGC 4 cut(s) 754, 1003, 1006, 1017
BsgI GTGCAG 2 cut(s) 276, 975
Bsh1236I CGCG 1 cut(s) 1054
Bsh1285I CGRYCG 1 cut(s) 118
BshFI GGCC 5 cut(s) 5, 117, 365, 552, 979
BsiEI CGRYCG 1 cut(s) 118
BsiSI CCGG 4 cut(s) 19, 111, 541, 554
BslFI GGGAC 1 cut(s) 165
BslI CCNNNNNNNGG 1 cut(s) 641
BsmAI GTCTC 1 cut(s) 1001
BsmFI GGGAC 1 cut(s) 165
BsmI GAATGC 2 cut(s) 277, 601
BsnI GGCC 5 cut(s) 5, 117, 365, 552, 979
Bsp13I TCCGGA 1 cut(s) 18
Bsp1407I TGTACA 1 cut(s) 564
Bsp143I GATC 3 cut(s) 137, 906, 1062
Bsp1720I GCTNAGC 1 cut(s) 1034
BspACI CCGC 6 cut(s) 6, 9, 98, 114, 511, 800
BspANI GGCC 5 cut(s) 5, 117, 365, 552, 979
BspCNI CTCAG 1 cut(s) 938
BspEI TCCGGA 1 cut(s) 18
BspFNI CGCG 1 cut(s) 1054
BspHI TCATGA 2 cut(s) 909, 1065
BspLI GGNNCC 3 cut(s) 153, 154, 1005
BspMAI CTGCAG 1 cut(s) 640
BspOI GCTAGC 2 cut(s) 540, 867
BspPI GGATC 1 cut(s) 1070
BsrDI GCAATG 1 cut(s) 327
BsrGI TGTACA 1 cut(s) 564
BsrI ACTGG 1 cut(s) 220
BssECI CCNNGG 4 cut(s) 147, 148, 366, 762
BssMI GATC 3 cut(s) 137, 906, 1062
BssNI GRCGYC 1 cut(s) 419
BssT1I CCWWGG 2 cut(s) 366, 762
Bst2UI CCWGG 1 cut(s) 149
Bst4CI ACNGT 1 cut(s) 841
BstACI GRCGYC 1 cut(s) 419
BstAUI TGTACA 1 cut(s) 564
BstC8I GCNNGC 4 cut(s) 538, 865, 869, 947
BstDEI CTNAG 2 cut(s) 925, 1034
BstF5I GGATG 2 cut(s) 672, 1114
BstFNI CGCG 1 cut(s) 1054
BstKTI GATC 3 cut(s) 140, 909, 1065
BstMAI GTCTC 1 cut(s) 1001
BstMBI GATC 3 cut(s) 137, 906, 1062
BstMCI CGRYCG 1 cut(s) 118
BstMWI GCNNNNNNNGC 3 cut(s) 317, 371, 703
BstNI CCWGG 1 cut(s) 149
BstNSI RCATGY 1 cut(s) 992
BstSCI CCNGG 3 cut(s) 147, 540, 552
BstSFI CTRYAG 1 cut(s) 636
BstUI CGCG 1 cut(s) 1054
BstV1I GCAGC 4 cut(s) 754, 1003, 1006, 1017
BstZI CGGCCG 1 cut(s) 115
BsuRI GGCC 5 cut(s) 5, 117, 365, 552, 979
BtsCI GGATG 2 cut(s) 672, 1114
BtsI GCAGTG 2 cut(s) 570, 645
BtsIMutI CAGTG 2 cut(s) 570, 645
Cac8I GCNNGC 4 cut(s) 538, 865, 869, 947
CciI TCATGA 2 cut(s) 909, 1065
Cfr13I GGNCC 4 cut(s) 152, 301, 551, 851
CseI GACGC 1 cut(s) 427
Csp6I GTAC 6 cut(s) 126, 196, 213, 565, 591, 690
CspCI CAANNNNNGTGG 2 cut(s) 309, 344
CviAII CATG 6 cut(s) 624, 910, 989, 1066, 1089, 1133
CviQI GTAC 6 cut(s) 126, 196, 213, 565, 591, 690
DdeI CTNAG 2 cut(s) 925, 1034
DpnI GATC 3 cut(s) 139, 908, 1064
DpnII GATC 3 cut(s) 137, 906, 1062
DrdI GACNNNNNNGTC 1 cut(s) 993
DseDI GACNNNNNNGTC 1 cut(s) 993
EaeI YGGCCR 4 cut(s) 3, 115, 363, 977
EagI CGGCCG 1 cut(s) 115
EciI GGCGGA 1 cut(s) 526
EclXI CGGCCG 1 cut(s) 115
Eco130I CCWWGG 2 cut(s) 366, 762
Eco47I GGWCC 3 cut(s) 152, 301, 851
Eco52I CGGCCG 1 cut(s) 115
EcoO109I RGGNCCY 2 cut(s) 152, 301
EcoRII CCWGG 1 cut(s) 147
EcoT14I CCWWGG 2 cut(s) 366, 762
EcoT22I ATGCAT 1 cut(s) 672
ErhI CCWWGG 2 cut(s) 366, 762
FaeI CATG 6 cut(s) 627, 913, 992, 1069, 1092, 1136
FalI AAGNNNNNCTT 2 cut(s) 242, 274
FaqI GGGAC 1 cut(s) 165
FatI CATG 6 cut(s) 623, 909, 988, 1065, 1088, 1132
Fnu4HI GCNGC 7 cut(s) 6, 9, 115, 768, 1017, 1020, 1031
FokI GGATG 2 cut(s) 679, 1121
Fsp4HI GCNGC 7 cut(s) 6, 9, 115, 768, 1017, 1020, 1031
FspBI CTAG 6 cut(s) 101, 129, 537, 687, 864, 1010
GluI GCNGC 7 cut(s) 6, 9, 115, 768, 1017, 1020, 1031
HaeIII GGCC 5 cut(s) 5, 117, 365, 552, 979
HapII CCGG 4 cut(s) 19, 111, 541, 554
HgaI GACGC 1 cut(s) 427
Hin1I GRCGYC 1 cut(s) 419
Hin1II CATG 6 cut(s) 627, 913, 992, 1069, 1092, 1136
HindIII AAGCTT 2 cut(s) 221, 1036
HinfI GANTC 7 cut(s) 22, 583, 604, 824, 830, 934, 1079
HpaII CCGG 4 cut(s) 19, 111, 541, 554
Hpy166II GTNNAC 2 cut(s) 29, 565
Hpy188I TCNGA 6 cut(s) 55, 490, 666, 829, 1117, 1153
Hpy188III TCNNGA 8 cut(s) 19, 135, 162, 242, 524, 910, 938, 1066
Hpy8I GTNNAC 2 cut(s) 29, 565
HpyAV CCTTC 1 cut(s) 1069
HpyCH4III ACNGT 1 cut(s) 841
HpyCH4V TGCA 8 cut(s) 293, 320, 388, 575, 638, 670, 770, 956
HpyF10VI GCNNNNNNNGC 3 cut(s) 317, 371, 703
HpyF3I CTNAG 2 cut(s) 925, 1034
Hsp92I GRCGYC 1 cut(s) 419
Hsp92II CATG 6 cut(s) 627, 913, 992, 1069, 1092, 1136
KflI GGGWCCC 1 cut(s) 152
Kpn2I TCCGGA 1 cut(s) 18
Kzo9I GATC 3 cut(s) 137, 906, 1062
Lsp1109I GCAGC 4 cut(s) 754, 1003, 1006, 1017
LweI GCATC 1 cut(s) 657
MaeI CTAG 6 cut(s) 101, 129, 537, 687, 864, 1010
MaeIII GTNAC 2 cut(s) 415, 1048
MalI GATC 3 cut(s) 139, 908, 1064
MboI GATC 3 cut(s) 137, 906, 1062
MboII GAAGA 3 cut(s) 167, 758, 1084
MlsI TGGCCA 2 cut(s) 365, 979
MluI ACGCGT 1 cut(s) 1052
MluNI TGGCCA 2 cut(s) 365, 979
MlyI GAGTC 2 cut(s) 16, 943
MmeI TCCRAC 1 cut(s) 468
MnlI CCTC 9 cut(s) 274, 398, 435, 454, 486, 524, 963, 1017, 1053
Mox20I TGGCCA 2 cut(s) 365, 979
Mph1103I ATGCAT 1 cut(s) 672
MroI TCCGGA 1 cut(s) 18
MscI TGGCCA 2 cut(s) 365, 979
MseI TTAA 4 cut(s) 396, 426, 516, 1122
MslI CAYNNNNRTG 1 cut(s) 675
Msp20I TGGCCA 2 cut(s) 365, 979
MspI CCGG 4 cut(s) 19, 111, 541, 554
MspR9I CCNGG 3 cut(s) 149, 542, 554
Mva1269I GAATGC 2 cut(s) 277, 601
MvaI CCWGG 1 cut(s) 149
MvnI CGCG 1 cut(s) 1054
MwoI GCNNNNNNNGC 3 cut(s) 317, 371, 703
NciI CCSGG 2 cut(s) 542, 554
NdeII GATC 3 cut(s) 137, 906, 1062
NheI GCTAGC 2 cut(s) 536, 863
NlaIII CATG 6 cut(s) 627, 913, 992, 1069, 1092, 1136
NlaIV GGNNCC 3 cut(s) 153, 154, 1005
NmuCI GTSAC 1 cut(s) 415
NsiI ATGCAT 1 cut(s) 672
NspI RCATGY 1 cut(s) 992
PagI TCATGA 2 cut(s) 909, 1065
PasI CCCWGGG 1 cut(s) 148
PciI ACATGT 1 cut(s) 988
PcsI WCGNNNNNNNCGW 2 cut(s) 260, 599
PctI GAATGC 2 cut(s) 277, 601
PfeI GAWTC 5 cut(s) 583, 604, 824, 830, 1079
PkrI GCNGC 7 cut(s) 7, 10, 116, 769, 1018, 1021, 1032
PleI GAGTC 2 cut(s) 16, 942
PpsI GAGTC 2 cut(s) 16, 942
PpuMI RGGWCCY 2 cut(s) 152, 301
PscI ACATGT 1 cut(s) 988
Psp5II RGGWCCY 2 cut(s) 152, 301
Psp6I CCWGG 1 cut(s) 147
PspGI CCWGG 1 cut(s) 147
PspN4I GGNNCC 3 cut(s) 153, 154, 1005
PspPI GGNCC 4 cut(s) 152, 301, 551, 851
PspPPI RGGWCCY 2 cut(s) 152, 301
PstI CTGCAG 1 cut(s) 640
RsaI GTAC 6 cut(s) 127, 197, 214, 566, 592, 691
RsaNI GTAC 6 cut(s) 126, 196, 213, 565, 591, 690
RseI CAYNNNNRTG 1 cut(s) 675
SaqAI TTAA 4 cut(s) 396, 426, 516, 1122
SatI GCNGC 7 cut(s) 6, 9, 115, 768, 1017, 1020, 1031
Sau3AI GATC 3 cut(s) 137, 906, 1062
Sau96I GGNCC 4 cut(s) 152, 301, 551, 851
ScaI AGTACT 2 cut(s) 127, 691
SchI GAGTC 2 cut(s) 16, 943
ScrFI CCNGG 3 cut(s) 149, 542, 554
SetI ASST 8 cut(s) 169, 225, 260, 285, 306, 376, 409, 1040
SfaNI GCATC 1 cut(s) 657
SfcI CTRYAG 1 cut(s) 636
SinI GGWCC 3 cut(s) 152, 301, 851
SmiMI CAYNNNNRTG 1 cut(s) 675
SpeI ACTAGT 1 cut(s) 128
SsiI CCGC 6 cut(s) 6, 9, 98, 114, 511, 800
SspMI CTAG 6 cut(s) 101, 129, 537, 687, 864, 1010
StyD4I CCNGG 3 cut(s) 147, 540, 552
StyI CCWWGG 2 cut(s) 366, 762
TaaI ACNGT 1 cut(s) 841
TaqI TCGA 5 cut(s) 178, 232, 254, 602, 857
TatI WGTACW 3 cut(s) 125, 564, 689
TauI GCSGC 3 cut(s) 8, 11, 117
TfiI GAWTC 5 cut(s) 583, 604, 824, 830, 1079
Tru1I TTAA 4 cut(s) 396, 426, 516, 1122
Tru9I TTAA 4 cut(s) 396, 426, 516, 1122
TscAI CASTG 2 cut(s) 577, 645
TseFI GTSAC 1 cut(s) 415
TseI GCWGC 4 cut(s) 767, 1016, 1019, 1030
Tsp45I GTSAC 1 cut(s) 415
TspDTI ATGAA 4 cut(s) 23, 759, 926, 1085
TspGWI ACGGA 1 cut(s) 780
TspRI CASTG 2 cut(s) 577, 645
VpaK11BI GGWCC 3 cut(s) 152, 301, 851
XapI RAATTY 2 cut(s) 86, 733
XceI RCATGY 1 cut(s) 992
XspI CTAG 6 cut(s) 101, 129, 537, 687, 864, 1010
ZrmI AGTACT 2 cut(s) 127, 691
Zsp2I ATGCAT 1 cut(s) 672
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.