AT2G22160

cysteine-type peptidase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0000141
Physical Location & Seq
Reverse (-)
9425143 .. 9425460
318 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G22160.1

Sequence Viewer

Length: 318 bp
ATGGGCCACTATCTTGTGCCCATCCACCAAACAGAAAGTAGTTTCGATGTATTTAAAAAAAATGCAGAATATATTGTCAAAACCAACAAGGAGAGAAAACCGTACAAGCTCAAGCTCAACAAGTTTGCAAACTTGACCGACGTCGAGTTTGTCAACGCTCACACATGTTTTGATATGAGTGATCACAAGAAAATACTCGACTCCAAACCGTTCTTCTACGAGAATATGACTCAAGCACCAGATTCCTTGGATTGGAGAGAGAAAGGAGCCGTCACCAATGTCAAAGATCAAGGACCAACGTGTAGTAAGAAGTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000323 GO:0000325 GO:0000932 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0004842 GO:0005575 GO:0005576 GO:0005615 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0005829 GO:0005911 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006970 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008219 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009314 GO:0009411 GO:0009416 GO:0009505 GO:0009506 GO:0009507 GO:0009536 GO:0009555 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009626 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009735 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0009750 GO:0009791 GO:0009814 GO:0009817 GO:0009888 GO:0009892 GO:0009894 GO:0009895 GO:0009908 GO:0009987 GO:0010015 GO:0010033 GO:0010035 GO:0010038 GO:0010053 GO:0010054 GO:0010150 GO:0010224 GO:0010282 GO:0010494 GO:0010498 GO:0010605 GO:0010623 GO:0012501 GO:0012505 GO:0016020 GO:0016049 GO:0016567 GO:0016740 GO:0016787 GO:0019222 GO:0019538 GO:0019787 GO:0019941 GO:0021700 GO:0022414 GO:0022622 GO:0030054 GO:0030154 GO:0030163 GO:0030312 GO:0031146 GO:0031224 GO:0031225 GO:0031347 GO:0031348 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034050 GO:0034284 GO:0034285 GO:0035770 GO:0036211 GO:0036464 GO:0040007 GO:0042176 GO:0042177 GO:0042221 GO:0042742 GO:0043161 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0045087 GO:0046688 GO:0048046 GO:0048229 GO:0048364 GO:0048366 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048468 GO:0048469 GO:0048519 GO:0048583 GO:0048585 GO:0048588 GO:0048589 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050832 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0060255 GO:0060560 GO:0061458 GO:0065007 GO:0070011 GO:0070647 GO:0071695 GO:0071704 GO:0071944 GO:0080090 GO:0080134 GO:0080147 GO:0080187 GO:0090558 GO:0090567 GO:0090627 GO:0090693 GO:0097501 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1905392 GO:1990169 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko04140 ko04142 ko04210 ko04612 ko04621 ko04924 map04140 map04142 map04210 map04612 map04621 map04924
Pfam Domains
Protein Families
Inhibitor_I29 Peptidase_C1

Protein Analysis

105

Amino Acids

12.19

Weight (kDa)

8.83

Isoelectric Point (pI)

31.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I29 PF08246 12 - 50 1e-08 Cathepsin propeptide inhibitor domain (I29)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000141)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22160
fragaria_vesca FvH4_1g23580 FvH4_1g25982 FvH4_2g17070 FvH4_3g40500 FvH4_6g27180 FvH4_6g27320 FvH4_6g33300 FvH4_6g33310 FvH4_7g09480 FvH4_7g13000 FvH4_7g13320 FvH4_7g13600
malus_domestica MD00G1208000.v1.1 MD09G1238200.v1.1 MD09G1238600.v1.1 MD09G1238800.v1.1 MD09G1239100.v1.1 MD16G1226900.v1.1 MD16G1242700.v1.1 MD16G1244200.v1.1 MD16G1245500.v1.1 MD16G1245800.v1.1 MD17G1231600.v1.1 MD17G1231700.v1.1 MD17G1231800.v1.1 MD17G1232200.v1.1 MD17G1232300.v1.1 MD17G1232400.v1.1
prunus_persica Prupe.1G072300_v2.0.a1 Prupe.1G072400_v2.0.a1 Prupe.3G106300_v2.0.a1 Prupe.3G106400_v2.0.a1 Prupe.3G119400_v2.0.a1 Prupe.3G120600_v2.0.a1 Prupe.3G121900_v2.0.a1 Prupe.3G122000_v2.0.a1 Prupe.3G122100_v2.0.a1 Prupe.3G122200_v2.0.a1 Prupe.3G122700_v2.0.a1 Prupe.5G055900_v2.0.a1 Prupe.5G056500_v2.0.a1
pyrus_communis pycom09g15770 pycom09g15780 pycom09g15790 pycom16g20640 pycom17g18390
rosa_chinensis RchiOBHm_Chr1g0352141 RchiOBHm_Chr1g0352581 RchiOBHm_Chr1g0352601 RchiOBHm_Chr1g0352621 RchiOBHm_Chr1g0352631 RchiOBHm_Chr2g0119131 RchiOBHm_Chr2g0128691 RchiOBHm_Chr2g0128701 RchiOBHm_Chr2g0129151 RchiOBHm_Chr2g0129221 RchiOBHm_Chr2g0129401 RchiOBHm_Chr2g0129421 RchiOBHm_Chr2g0129431 RchiOBHm_Chr2g0129471 RchiOBHm_Chr2g0129481 RchiOBHm_Chr2g0129491 RchiOBHm_Chr2g0143051 RchiOBHm_Chr2g0143121 RchiOBHm_Chr2g0143171 RchiOBHm_Chr3g0457341 RchiOBHm_Chr5g0049011 RchiOBHm_Chr6g0281281 RchiOBHm_Chr6g0281311
rosa_laevigata RLG00000012975 RLG00000012976 RLG00000012979 RLG00000018447 RLG00000019018 RLG00000019061 RLG00000019066 RLG00000019078 RLG00000019079 RLG00000019080 RLG00000019083 RLG00000019085 RLG00000020009 RLG00000020010 RLG00000025234 RLG00000028326 RLG00000028327 RLG00000028328 RLG00000028329 RLG00000028357 RLG00000031784
rosa_multiflora Rmu_co8169188.1_g000001 Rmu_co8261007.1_g000001 Rmu_co8314361.1_g000001 Rmu_sc0000109.1_g000014 Rmu_sc0000638.1_g000020 Rmu_sc0000847.1_g000020 Rmu_sc0000847.1_g000028 Rmu_sc0000847.1_g000037 Rmu_sc0000847.1_g000046 Rmu_sc0000911.1_g000034 Rmu_sc0000999.1_g000021 Rmu_sc0001171.1_g000013 Rmu_sc0001171.1_g000018 Rmu_sc0001171.1_g000019 Rmu_sc0001653.1_g000004 Rmu_sc0002277.1_g000005 Rmu_sc0003479.1_g000001 Rmu_sc0005118.1_g000006 Rmu_sc0005118.1_g000008 Rmu_sc0005227.1_g000012 Rmu_sc0005442.1_g000010 Rmu_sc0005514.1_g000005 Rmu_sc0005996.1_g000014 Rmu_sc0008800.1_g000002 Rmu_sc0008800.1_g000010 Rmu_sc0008800.1_g000014
rosa_roxburghii Rroxscaffold_1G00065560 Rroxscaffold_2G00102080 Rroxscaffold_2G00102090 Rroxscaffold_2G00102110 Rroxscaffold_2G00114560 Rroxscaffold_2G00114570 Rroxscaffold_2G00114610 Rroxscaffold_2G00114620 Rroxscaffold_2G00114640 Rroxscaffold_2G00114740 Rroxscaffold_2G00114790 Rroxscaffold_2G00115860 Rroxscaffold_2G00124490 Rroxscaffold_4G00302260 Rroxscaffold_4G00302530 Rroxscaffold_4G00302550 Rroxscaffold_4G00302560 Rroxscaffold_4G00302620 Rroxscaffold_6G00421980 Rroxscaffold_7G00187140 Rroxscaffold_7G00187170
rosa_rugosa Rorug01G0225000 Rorug01G0230200 Rorug02G0220500 Rorug02G0280000 Rorug02G0285200 Rorug02G0285400 Rorug02G0286300 Rorug02G0286300 Rorug02G0286400 Rorug02G0286900 Rorug02G0377800 Rorug02G0377900 Rorug02G0378000 Rorug02G0378000 Rorug02G0378800 Rorug03G0019800 Rorug04G0452700 Rorug06G0140300 Rorug06G0140500 Rorug06G0140600
rosa_samantha Rh1CG223600 Rh1CG227200 Rh1CG227500 Rh1CG227600 Rh2BG341200 Rh2BG345300 Rh2BG440200 Rh2DG284500 Rh2DG357900 Rh2DG362100 Rh2DG362600 Rh2DG364500 Rh2DG364600 Rh2DG364700 Rh2DG364800 Rh2DG364900 Rh2DG365000 Rh2DG365400 Rh2DG450400 Rh3AG080000 Rh3BG081900 Rh5AG322100 Rh5BG079800 Rh6AG252100 Rh6BG255600
rosa_wichuraiana Rw1G020770 Rw1G021290 Rw2G022120 Rw2G026940 Rw2G027360 Rw2G027370 Rw2G027950 Rw2G027960 Rw2G027970 Rw2G035220 Rw3G006890 Rw6G021900 Rw6G021930 Rw6G021950 Rw6G021970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 144
AcyI GRCGYC 1 cut(s) 141
AfaI GTAC 1 cut(s) 104
AfiI CCNNNNNNNGG 1 cut(s) 252
AflIII ACRYGT 2 cut(s) 164, 299
AjuI GAANNNNNNNTTGG 2 cut(s) 197, 229
AluBI AGCT 2 cut(s) 109, 115
AluI AGCT 2 cut(s) 109, 115
AoxI GGCC 1 cut(s) 4
ArsI GACNNNNNNTTYG 2 cut(s) 131, 163
AspS9I GGNCC 2 cut(s) 4, 293
AsuHPI GGTGA 1 cut(s) 265
AvaII GGWCC 1 cut(s) 293
BaeGI GKGCMC 1 cut(s) 21
BccI CCATC 1 cut(s) 29
BceAI ACGGC 1 cut(s) 254
BclI TGATCA 1 cut(s) 181
Bme18I GGWCC 1 cut(s) 293
BmgT120I GGNCC 2 cut(s) 4, 293
BmiI GGNNCC 1 cut(s) 268
BoxI GACNNNNGTC 1 cut(s) 140
BpuEI CTTGAG 2 cut(s) 95, 216
BsaHI GRCGYC 1 cut(s) 141
BsaJI CCNNGG 1 cut(s) 246
Bsc4I CCNNNNNNNGG 1 cut(s) 252
BseDI CCNNGG 1 cut(s) 246
BseGI GGATG 1 cut(s) 21
BseLI CCNNNNNNNGG 1 cut(s) 252
BseSI GKGCMC 1 cut(s) 21
BshFI GGCC 1 cut(s) 6
BslI CCNNNNNNNGG 1 cut(s) 252
BsnI GGCC 1 cut(s) 6
Bsp1286I GDGCHC 1 cut(s) 21
Bsp143I GATC 2 cut(s) 181, 286
BspANI GGCC 1 cut(s) 6
BspLI GGNNCC 1 cut(s) 268
BssECI CCNNGG 1 cut(s) 246
BssMI GATC 2 cut(s) 181, 286
BssNI GRCGYC 1 cut(s) 141
BssT1I CCWWGG 1 cut(s) 246
Bst4CI ACNGT 2 cut(s) 102, 210
BstACI GRCGYC 1 cut(s) 141
BstF5I GGATG 1 cut(s) 21
BstKTI GATC 2 cut(s) 184, 289
BstMBI GATC 2 cut(s) 181, 286
BstNSI RCATGY 1 cut(s) 168
BstPAI GACNNNNGTC 1 cut(s) 140
BstSLI GKGCMC 1 cut(s) 21
BsuRI GGCC 1 cut(s) 6
BtsCI GGATG 1 cut(s) 21
Cfr13I GGNCC 2 cut(s) 4, 293
Csp6I GTAC 1 cut(s) 103
CviAII CATG 1 cut(s) 165
CviJI RGCY 4 cut(s) 6, 109, 115, 269
CviKI_1 RGCY 4 cut(s) 6, 109, 115, 269
CviQI GTAC 1 cut(s) 103
DpnI GATC 2 cut(s) 183, 288
DpnII GATC 2 cut(s) 181, 286
DraI TTTAAA 1 cut(s) 55
Eco130I CCWWGG 1 cut(s) 246
Eco47I GGWCC 1 cut(s) 293
EcoT14I CCWWGG 1 cut(s) 246
ErhI CCWWGG 1 cut(s) 246
FaeI CATG 1 cut(s) 168
FaiI YATR 4 cut(s) 72, 166, 176, 227
FatI CATG 1 cut(s) 164
FbaI TGATCA 1 cut(s) 181
FokI GGATG 1 cut(s) 8
HaeIII GGCC 1 cut(s) 6
Hin1I GRCGYC 1 cut(s) 141
Hin1II CATG 1 cut(s) 168
HincII GTYRAC 1 cut(s) 154
HindII GTYRAC 1 cut(s) 154
HinfI GANTC 3 cut(s) 200, 229, 242
HphI GGTGA 1 cut(s) 265
Hpy166II GTNNAC 1 cut(s) 154
Hpy8I GTNNAC 1 cut(s) 154
Hpy99I CGWCG 2 cut(s) 143, 146
HpyCH4III ACNGT 2 cut(s) 102, 210
HpyCH4IV ACGT 2 cut(s) 141, 299
HpyCH4V TGCA 2 cut(s) 65, 128
HpySE526I ACGT 2 cut(s) 141, 299
Hsp92I GRCGYC 1 cut(s) 141
Hsp92II CATG 1 cut(s) 168
Ksp22I TGATCA 1 cut(s) 181
Kzo9I GATC 2 cut(s) 181, 286
LmnI GCTCC 1 cut(s) 266
LpnPI CCDG 1 cut(s) 252
MaeII ACGT 2 cut(s) 141, 299
MaeIII GTNAC 1 cut(s) 271
MalI GATC 2 cut(s) 183, 288
MboI GATC 2 cut(s) 181, 286
MboII GAAGA 1 cut(s) 205
MhlI GDGCHC 1 cut(s) 21
MlyI GAGTC 2 cut(s) 194, 223
MseI TTAA 1 cut(s) 54
NdeII GATC 2 cut(s) 181, 286
NlaIII CATG 1 cut(s) 168
NlaIV GGNNCC 1 cut(s) 268
NmuCI GTSAC 1 cut(s) 271
NspI RCATGY 1 cut(s) 168
PciI ACATGT 1 cut(s) 164
PfeI GAWTC 1 cut(s) 242
PleI GAGTC 2 cut(s) 194, 223
PpsI GAGTC 2 cut(s) 194, 223
PscI ACATGT 1 cut(s) 164
PshAI GACNNNNGTC 1 cut(s) 140
PspN4I GGNNCC 1 cut(s) 268
PspPI GGNCC 2 cut(s) 4, 293
RsaI GTAC 1 cut(s) 104
RsaNI GTAC 1 cut(s) 103
SaqAI TTAA 1 cut(s) 54
Sau3AI GATC 2 cut(s) 181, 286
Sau96I GGNCC 2 cut(s) 4, 293
SchI GAGTC 2 cut(s) 194, 223
SduI GDGCHC 1 cut(s) 21
SetI ASST 4 cut(s) 111, 117, 144, 302
SinI GGWCC 1 cut(s) 293
SmlI CTYRAG 2 cut(s) 110, 231
SmoI CTYRAG 2 cut(s) 110, 231
StyI CCWWGG 1 cut(s) 246
TaaI ACNGT 2 cut(s) 102, 210
TaiI ACGT 2 cut(s) 144, 302
TaqI TCGA 3 cut(s) 45, 144, 198
TaqII GACCGA 1 cut(s) 152
TfiI GAWTC 1 cut(s) 242
Tru1I TTAA 1 cut(s) 54
Tru9I TTAA 1 cut(s) 54
TseFI GTSAC 1 cut(s) 271
Tsp45I GTSAC 1 cut(s) 271
VpaK11BI GGWCC 1 cut(s) 293
XceI RCATGY 1 cut(s) 168
ZraI GACGTC 1 cut(s) 142
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.