Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000141

Physical Location & Seq

Genomic Coordinates Forward (+)

40801981 .. 40803073

Gene Structure 1093 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00114620.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 921 bp

ATGTATGGGAGGTACGAGCAATGGATGGCTCATTATGGACGTGTCTATAATGATGTCAACGAGAAGGAGGAACGCTTCCAGATATTCAAGGACAATGTGGCATTTATAGAATCTTCCAATAATGCTGGAAACAAACTTTACAAATTGAGTGTGAATCAATTTGCAGACCTTACAAATGAAGAATTCACTACCGCAAGAAACCGGTTCAAGGGGCATGAGTGTTCCACAAAGACCACTACTTTCAGGTATGAAAATGCTAGCGTGCCAGCTACAATGGACTGGAGACAGAAAGGAGCTGTAACTCCCGTCAAGGACCAAGGCCAATGTGGGTGCTGTTGGGCGTTCTCAGCCGTGGCAGCCATGGAAGGAATTACTCAACTTACAACTGGTAAATTGATTTCTTTGTCTGAGCAAGAGCTAGTTGACTGTGATGTCAATGGTGAAGATCAAGGCTGTGAGGGTGGTTTGATGGACGATGCTTTTCAGTTCATTAATCAAAATCATGGACTCAGTACCGAGGCTAACTATCCCTACACCGGTGTTGATGGTACATGCAATGCACAGAAGGAGGCAAGCCATGCAGCCTCGATAACTGGCCACGAAGATGTGCCTGCTAACAGTGAAAGCGCACTTCTTAAGGCAGTTGCTAATCAACCTATTTCTGTTGCCATTGATGCTAGCGGATCTGATTTCCAATTCTATTCAAGTGGTGTTTTCACCGGAACCTGTGGAACGAGCCTGGACCATGGTGTTACCGCTGTTGGTTATGGCATCAGTGATGATGGGACTAAGTATTGGTTGGTTAAGAACTCATGGGGCGCAGAATGGGGGGAAGAAGGTTACATAAGAATGCAAAGAGATGTTGCTGCACAGGAAGGTCTTTGTGGTATAGCTATGGAAGCCTCTTACCCCACTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000323 GO:0000325 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009505 GO:0009555 GO:0009605 GO:0009607 GO:0009620 GO:0009626 GO:0009791 GO:0009908 GO:0009987 GO:0010623 GO:0012501 GO:0012505 GO:0016787 GO:0019538 GO:0022414 GO:0030154 GO:0030163 GO:0030312 GO:0032501 GO:0032502 GO:0033554 GO:0034050 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048468 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050832 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0070011 GO:0071704 GO:0071944 GO:0090567 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I29 Peptidase_C1

Protein Analysis

306

Amino Acids

33.41

Weight (kDa)

4.62

Isoelectric Point (pI)

18.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I29	PF08246	5 - 62	3.1e-20	Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1	PF00112	88 - 305	1.8e-84	Papain family cysteine protease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22160
fragaria_vesca	FvH4_1g23580 FvH4_1g25982 FvH4_2g17070 FvH4_3g40500 FvH4_6g27180 FvH4_6g27320 FvH4_6g33300 FvH4_6g33310 FvH4_7g09480 FvH4_7g13000 FvH4_7g13320 FvH4_7g13600
malus_domestica	MD00G1208000.v1.1 MD09G1238200.v1.1 MD09G1238600.v1.1 MD09G1238800.v1.1 MD09G1239100.v1.1 MD16G1226900.v1.1 MD16G1242700.v1.1 MD16G1244200.v1.1 MD16G1245500.v1.1 MD16G1245800.v1.1 MD17G1231600.v1.1 MD17G1231700.v1.1 MD17G1231800.v1.1 MD17G1232200.v1.1 MD17G1232300.v1.1 MD17G1232400.v1.1
prunus_persica	Prupe.1G072300_v2.0.a1 Prupe.1G072400_v2.0.a1 Prupe.3G106300_v2.0.a1 Prupe.3G106400_v2.0.a1 Prupe.3G119400_v2.0.a1 Prupe.3G120600_v2.0.a1 Prupe.3G121900_v2.0.a1 Prupe.3G122000_v2.0.a1 Prupe.3G122100_v2.0.a1 Prupe.3G122200_v2.0.a1 Prupe.3G122700_v2.0.a1 Prupe.5G055900_v2.0.a1 Prupe.5G056500_v2.0.a1
pyrus_communis	pycom09g15770 pycom09g15780 pycom09g15790 pycom16g20640 pycom17g18390
rosa_chinensis	RchiOBHm_Chr1g0352141 RchiOBHm_Chr1g0352581 RchiOBHm_Chr1g0352601 RchiOBHm_Chr1g0352621 RchiOBHm_Chr1g0352631 RchiOBHm_Chr2g0119131 RchiOBHm_Chr2g0128691 RchiOBHm_Chr2g0128701 RchiOBHm_Chr2g0129151 RchiOBHm_Chr2g0129221 RchiOBHm_Chr2g0129401 RchiOBHm_Chr2g0129421 RchiOBHm_Chr2g0129431 RchiOBHm_Chr2g0129471 RchiOBHm_Chr2g0129481 RchiOBHm_Chr2g0129491 RchiOBHm_Chr2g0143051 RchiOBHm_Chr2g0143121 RchiOBHm_Chr2g0143171 RchiOBHm_Chr3g0457341 RchiOBHm_Chr5g0049011 RchiOBHm_Chr6g0281281 RchiOBHm_Chr6g0281311
rosa_laevigata	RLG00000012975 RLG00000012976 RLG00000012979 RLG00000018447 RLG00000019018 RLG00000019061 RLG00000019066 RLG00000019078 RLG00000019079 RLG00000019080 RLG00000019083 RLG00000019085 RLG00000020009 RLG00000020010 RLG00000025234 RLG00000028326 RLG00000028327 RLG00000028328 RLG00000028329 RLG00000028357 RLG00000031784
rosa_multiflora	Rmu_co8169188.1_g000001 Rmu_co8261007.1_g000001 Rmu_co8314361.1_g000001 Rmu_sc0000109.1_g000014 Rmu_sc0000638.1_g000020 Rmu_sc0000847.1_g000020 Rmu_sc0000847.1_g000028 Rmu_sc0000847.1_g000037 Rmu_sc0000847.1_g000046 Rmu_sc0000911.1_g000034 Rmu_sc0000999.1_g000021 Rmu_sc0001171.1_g000013 Rmu_sc0001171.1_g000018 Rmu_sc0001171.1_g000019 Rmu_sc0001653.1_g000004 Rmu_sc0002277.1_g000005 Rmu_sc0003479.1_g000001 Rmu_sc0005118.1_g000006 Rmu_sc0005118.1_g000008 Rmu_sc0005227.1_g000012 Rmu_sc0005442.1_g000010 Rmu_sc0005514.1_g000005 Rmu_sc0005996.1_g000014 Rmu_sc0008800.1_g000002 Rmu_sc0008800.1_g000010 Rmu_sc0008800.1_g000014
rosa_roxburghii	Rroxscaffold_1G00065560 Rroxscaffold_2G00102080 Rroxscaffold_2G00102090 Rroxscaffold_2G00102110 Rroxscaffold_2G00114560 Rroxscaffold_2G00114570 Rroxscaffold_2G00114610 Rroxscaffold_2G00114620 Rroxscaffold_2G00114640 Rroxscaffold_2G00114740 Rroxscaffold_2G00114790 Rroxscaffold_2G00115860 Rroxscaffold_2G00124490 Rroxscaffold_4G00302260 Rroxscaffold_4G00302530 Rroxscaffold_4G00302550 Rroxscaffold_4G00302560 Rroxscaffold_4G00302620 Rroxscaffold_6G00421980 Rroxscaffold_7G00187140 Rroxscaffold_7G00187170
rosa_rugosa	Rorug01G0225000 Rorug01G0230200 Rorug02G0220500 Rorug02G0280000 Rorug02G0285200 Rorug02G0285400 Rorug02G0286300 Rorug02G0286300 Rorug02G0286400 Rorug02G0286900 Rorug02G0377800 Rorug02G0377900 Rorug02G0378000 Rorug02G0378000 Rorug02G0378800 Rorug03G0019800 Rorug04G0452700 Rorug06G0140300 Rorug06G0140500 Rorug06G0140600
rosa_samantha	Rh1CG223600 Rh1CG227200 Rh1CG227500 Rh1CG227600 Rh2BG341200 Rh2BG345300 Rh2BG440200 Rh2DG284500 Rh2DG357900 Rh2DG362100 Rh2DG362600 Rh2DG364500 Rh2DG364600 Rh2DG364700 Rh2DG364800 Rh2DG364900 Rh2DG365000 Rh2DG365400 Rh2DG450400 Rh3AG080000 Rh3BG081900 Rh5AG322100 Rh5BG079800 Rh6AG252100 Rh6BG255600
rosa_wichuraiana	Rw1G020770 Rw1G021290 Rw2G022120 Rw2G026940 Rw2G027360 Rw2G027370 Rw2G027950 Rw2G027960 Rw2G027970 Rw2G035220 Rw3G006890 Rw6G021900 Rw6G021930 Rw6G021950 Rw6G021970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	431
AciI	CCGC	3 cut(s)	192, 681, 756
AclWI	GGATC	1 cut(s)	691
AcoI	YGGCCR	1 cut(s)	595
AcsI	RAATTY	1 cut(s)	182
AfaI	GTAC	3 cut(s)	14, 514, 550
AfiI	CCNNNNNNNGG	2 cut(s)	208, 536
AflII	CTTAAG	1 cut(s)	635
AflIII	ACRYGT	1 cut(s)	40
AgeI	ACCGGT	2 cut(s)	201, 536
AgsI	TTSAA	3 cut(s)	88, 208, 705
AjiI	CACGTC	1 cut(s)	41
AjnI	CCWGG	1 cut(s)	738
AluBI	AGCT	4 cut(s)	269, 296, 418, 893
AluI	AGCT	4 cut(s)	269, 296, 418, 893
Alw26I	GTCTC	1 cut(s)	277
AlwI	GGATC	1 cut(s)	691
AoxI	GGCC	2 cut(s)	319, 595
ApeKI	GCWGC	3 cut(s)	356, 581, 866
ApoI	RAATTY	1 cut(s)	182
AseI	ATTAAT	1 cut(s)	492
AsiGI	ACCGGT	2 cut(s)	201, 536
AspLEI	GCGC	2 cut(s)	629, 821
AspS9I	GGNCC	2 cut(s)	313, 742
AsuHPI	GGTGA	2 cut(s)	452, 709
AsuNHI	GCTAGC	2 cut(s)	257, 677
AvaII	GGWCC	2 cut(s)	313, 742
BalI	TGGCCA	1 cut(s)	597
BbvI	GCAGC	3 cut(s)	368, 593, 853
BccI	CCATC	4 cut(s)	19, 463, 539, 776
BceAI	ACGGC	1 cut(s)	335
BciT130I	CCWGG	1 cut(s)	740
BcoDI	GTCTC	1 cut(s)	277
BfaI	CTAG	3 cut(s)	258, 419, 678
BfrI	CTTAAG	1 cut(s)	635
BisI	GCNGC	3 cut(s)	357, 582, 867
BlsI	GCNGC	3 cut(s)	358, 583, 868
Bme1390I	CCNGG	1 cut(s)	740
Bme18I	GGWCC	2 cut(s)	313, 742
BmgBI	CACGTC	1 cut(s)	41
BmgT120I	GGNCC	2 cut(s)	313, 742
BmiI	GGNNCC	1 cut(s)	724
BmrFI	CCNGG	1 cut(s)	740
BmsI	GCATC	3 cut(s)	466, 664, 780
BmtI	GCTAGC	2 cut(s)	261, 681
BpmI	CTGGAG	1 cut(s)	301
BsaJI	CCNNGG	5 cut(s)	316, 351, 360, 516, 745
BsaWI	WCCGGW	3 cut(s)	201, 536, 719
Bsc4I	CCNNNNNNNGG	2 cut(s)	208, 536
Bse118I	RCCGGY	2 cut(s)	201, 536
Bse1I	ACTGG	3 cut(s)	284, 391, 598
Bse3DI	GCAATG	2 cut(s)	26, 562
BseBI	CCWGG	1 cut(s)	740
BseDI	CCNNGG	5 cut(s)	316, 351, 360, 516, 745
BseGI	GGATG	1 cut(s)	30
BseLI	CCNNNNNNNGG	2 cut(s)	208, 536
BseMI	GCAATG	2 cut(s)	26, 562
BseMII	CTCAG	3 cut(s)	360, 399, 523
BseNI	ACTGG	3 cut(s)	284, 391, 598
BseXI	GCAGC	3 cut(s)	368, 593, 853
BsgI	GTGCAG	1 cut(s)	852
BshFI	GGCC	2 cut(s)	321, 597
BshTI	ACCGGT	2 cut(s)	201, 536
BsiSI	CCGG	3 cut(s)	202, 537, 720
BslFI	GGGAC	1 cut(s)	799
BslI	CCNNNNNNNGG	2 cut(s)	208, 536
BsmAI	GTCTC	1 cut(s)	277
BsmFI	GGGAC	1 cut(s)	799
BsmI	GAATGC	1 cut(s)	855
BsnI	GGCC	2 cut(s)	321, 597
Bsp143I	GATC	2 cut(s)	445, 683
Bsp19I	CCATGG	2 cut(s)	360, 745
BspACI	CCGC	3 cut(s)	192, 681, 756
BspANI	GGCC	2 cut(s)	321, 597
BspCNI	CTCAG	3 cut(s)	359, 400, 522
BspLI	GGNNCC	1 cut(s)	724
BspOI	GCTAGC	2 cut(s)	261, 681
BspPI	GGATC	1 cut(s)	691
BspTI	CTTAAG	1 cut(s)	635
BsrDI	GCAATG	2 cut(s)	26, 562
BsrFI	RCCGGY	2 cut(s)	201, 536
BsrI	ACTGG	3 cut(s)	284, 391, 598
BssAI	RCCGGY	2 cut(s)	201, 536
BssECI	CCNNGG	5 cut(s)	316, 351, 360, 516, 745
BssMI	GATC	2 cut(s)	445, 683
BssT1I	CCWWGG	3 cut(s)	316, 360, 745
Bst2UI	CCWGG	1 cut(s)	740
Bst4CI	ACNGT	2 cut(s)	428, 620
BstAFI	CTTAAG	1 cut(s)	635
BstAPI	GCANNNNNTGC	1 cut(s)	578
BstC8I	GCNNGC	6 cut(s)	259, 263, 267, 574, 612, 679
BstDEI	CTNAG	4 cut(s)	346, 408, 509, 789
BstDSI	CCRYGG	3 cut(s)	351, 360, 745
BstF5I	GGATG	1 cut(s)	30
BstHHI	GCGC	2 cut(s)	629, 821
BstKTI	GATC	2 cut(s)	448, 686
BstMAI	GTCTC	1 cut(s)	277
BstMBI	GATC	2 cut(s)	445, 683
BstMWI	GCNNNNNNNGC	5 cut(s)	347, 356, 578, 674, 899
BstNI	CCWGG	1 cut(s)	740
BstNSI	RCATGY	1 cut(s)	555
BstSCI	CCNGG	1 cut(s)	738
BstV1I	GCAGC	3 cut(s)	368, 593, 853
BstX2I	RGATCY	1 cut(s)	683
BstYI	RGATCY	1 cut(s)	683
BsuRI	GGCC	2 cut(s)	321, 597
BtgI	CCRYGG	3 cut(s)	351, 360, 745
BtrI	CACGTC	1 cut(s)	41
BtsCI	GGATG	1 cut(s)	30
BtsI	GCAGTG	1 cut(s)	912
BtsIMutI	CAGTG	3 cut(s)	625, 781, 912
Cac8I	GCNNGC	6 cut(s)	259, 263, 267, 574, 612, 679
CfoI	GCGC	2 cut(s)	629, 821
Cfr10I	RCCGGY	2 cut(s)	201, 536
Cfr13I	GGNCC	2 cut(s)	313, 742
Csp6I	GTAC	3 cut(s)	13, 513, 549
CspAI	ACCGGT	2 cut(s)	201, 536
CviAII	CATG	7 cut(s)	215, 361, 503, 552, 578, 746, 813
CviQI	GTAC	3 cut(s)	13, 513, 549
DdeI	CTNAG	4 cut(s)	346, 408, 509, 789
DpnI	GATC	2 cut(s)	447, 685
DpnII	GATC	2 cut(s)	445, 683
DrdI	GACNNNNNNGTC	1 cut(s)	431
DseDI	GACNNNNNNGTC	1 cut(s)	431
EaeI	YGGCCR	1 cut(s)	595
Eco130I	CCWWGG	3 cut(s)	316, 360, 745
Eco47I	GGWCC	2 cut(s)	313, 742
EcoRI	GAATTC	1 cut(s)	182
EcoRII	CCWGG	1 cut(s)	738
EcoT14I	CCWWGG	3 cut(s)	316, 360, 745
ErhI	CCWWGG	3 cut(s)	316, 360, 745
FaeI	CATG	7 cut(s)	218, 364, 506, 555, 581, 749, 816
FaqI	GGGAC	1 cut(s)	799
FatI	CATG	7 cut(s)	214, 360, 502, 551, 577, 745, 812
Fnu4HI	GCNGC	3 cut(s)	357, 582, 867
FokI	GGATG	1 cut(s)	37
Fsp4HI	GCNGC	3 cut(s)	357, 582, 867
FspBI	CTAG	3 cut(s)	258, 419, 678
GlaI	GCGC	2 cut(s)	628, 820
GluI	GCNGC	3 cut(s)	357, 582, 867
GsuI	CTGGAG	1 cut(s)	301
HaeIII	GGCC	2 cut(s)	321, 597
HapII	CCGG	3 cut(s)	202, 537, 720
HhaI	GCGC	2 cut(s)	629, 821
Hin1II	CATG	7 cut(s)	218, 364, 506, 555, 581, 749, 816
Hin6I	GCGC	2 cut(s)	627, 819
HinP1I	GCGC	2 cut(s)	627, 819
HincII	GTYRAC	2 cut(s)	58, 424
HindII	GTYRAC	2 cut(s)	58, 424
HinfI	GANTC	3 cut(s)	110, 154, 507
HpaII	CCGG	3 cut(s)	202, 537, 720
HphI	GGTGA	2 cut(s)	452, 709
Hpy166II	GTNNAC	2 cut(s)	58, 424
Hpy188I	TCNGA	2 cut(s)	409, 688
Hpy188III	TCNNGA	1 cut(s)	79
Hpy8I	GTNNAC	2 cut(s)	58, 424
HpyAV	CCTTC	5 cut(s)	58, 359, 559, 830, 869
HpyCH4III	ACNGT	2 cut(s)	428, 620
HpyCH4IV	ACGT	1 cut(s)	40
HpyCH4V	TGCA	6 cut(s)	164, 555, 560, 581, 853, 869
HpyF10VI	GCNNNNNNNGC	5 cut(s)	347, 356, 578, 674, 899
HpyF3I	CTNAG	4 cut(s)	346, 408, 509, 789
HpySE526I	ACGT	1 cut(s)	40
Hsp92II	CATG	7 cut(s)	218, 364, 506, 555, 581, 749, 816
HspAI	GCGC	2 cut(s)	627, 819
Kzo9I	GATC	2 cut(s)	445, 683
LmnI	GCTCC	1 cut(s)	293
Lsp1109I	GCAGC	3 cut(s)	368, 593, 853
LweI	GCATC	3 cut(s)	466, 664, 780
MaeI	CTAG	3 cut(s)	258, 419, 678
MaeII	ACGT	1 cut(s)	40
MaeIII	GTNAC	3 cut(s)	298, 751, 839
MalI	GATC	2 cut(s)	447, 685
MboI	GATC	2 cut(s)	445, 683
MboII	GAAGA	5 cut(s)	105, 191, 455, 614, 845
MflI	RGATCY	1 cut(s)	683
MlsI	TGGCCA	1 cut(s)	597
MluCI	AATT	6 cut(s)	143, 158, 182, 369, 392, 695
MluNI	TGGCCA	1 cut(s)	597
MlyI	GAGTC	1 cut(s)	501
MnlI	CCTC	7 cut(s)	3, 61, 451, 511, 562, 595, 913
Mox20I	TGGCCA	1 cut(s)	597
MscI	TGGCCA	1 cut(s)	597
MseI	TTAA	3 cut(s)	492, 636, 804
MslI	CAYNNNNRTG	2 cut(s)	603, 848
Msp20I	TGGCCA	1 cut(s)	597
MspA1I	CMGCKG	1 cut(s)	758
MspCI	CTTAAG	1 cut(s)	635
MspI	CCGG	3 cut(s)	202, 537, 720
MspR9I	CCNGG	1 cut(s)	740
Mva1269I	GAATGC	1 cut(s)	855
MvaI	CCWGG	1 cut(s)	740
MwoI	GCNNNNNNNGC	5 cut(s)	347, 356, 578, 674, 899
NcoI	CCATGG	2 cut(s)	360, 745
NdeII	GATC	2 cut(s)	445, 683
NheI	GCTAGC	2 cut(s)	257, 677
NlaIII	CATG	7 cut(s)	218, 364, 506, 555, 581, 749, 816
NlaIV	GGNNCC	1 cut(s)	724
NspI	RCATGY	1 cut(s)	555
PctI	GAATGC	1 cut(s)	855
PfeI	GAWTC	2 cut(s)	110, 154
PinAI	ACCGGT	2 cut(s)	201, 536
PkrI	GCNGC	3 cut(s)	358, 583, 868
PleI	GAGTC	1 cut(s)	501
PpsI	GAGTC	1 cut(s)	501
PshBI	ATTAAT	1 cut(s)	492
Psp6I	CCWGG	1 cut(s)	738
PspGI	CCWGG	1 cut(s)	738
PspN4I	GGNNCC	1 cut(s)	724
PspPI	GGNCC	2 cut(s)	313, 742
PsuI	RGATCY	1 cut(s)	683
RsaI	GTAC	3 cut(s)	14, 514, 550
RsaNI	GTAC	3 cut(s)	13, 513, 549
RseI	CAYNNNNRTG	2 cut(s)	603, 848
SaqAI	TTAA	3 cut(s)	492, 636, 804
SatI	GCNGC	3 cut(s)	357, 582, 867
Sau3AI	GATC	2 cut(s)	445, 683
Sau96I	GGNCC	2 cut(s)	313, 742
SchI	GAGTC	1 cut(s)	501
ScrFI	CCNGG	1 cut(s)	740
SfaNI	GCATC	3 cut(s)	466, 664, 780
SgrAI	CRCCGGYG	1 cut(s)	536
SinI	GGWCC	2 cut(s)	313, 742
SmiMI	CAYNNNNRTG	2 cut(s)	603, 848
SmlI	CTYRAG	1 cut(s)	635
SmoI	CTYRAG	1 cut(s)	635
Sse9I	AATT	6 cut(s)	143, 158, 182, 369, 392, 695
SsiI	CCGC	3 cut(s)	192, 681, 756
SspMI	CTAG	3 cut(s)	258, 419, 678
StyD4I	CCNGG	1 cut(s)	738
StyI	CCWWGG	3 cut(s)	316, 360, 745
TaaI	ACNGT	2 cut(s)	428, 620
TaiI	ACGT	1 cut(s)	43
TaqI	TCGA	1 cut(s)	587
TasI	AATT	6 cut(s)	143, 158, 182, 369, 392, 695
TfiI	GAWTC	2 cut(s)	110, 154
Tru1I	TTAA	3 cut(s)	492, 636, 804
Tru9I	TTAA	3 cut(s)	492, 636, 804
TscAI	CASTG	3 cut(s)	625, 781, 919
TseI	GCWGC	3 cut(s)	356, 581, 866
TspDTI	ATGAA	3 cut(s)	192, 264, 478
TspRI	CASTG	3 cut(s)	625, 781, 919
Vha464I	CTTAAG	1 cut(s)	635
VpaK11BI	GGWCC	2 cut(s)	313, 742
VspI	ATTAAT	1 cut(s)	492
XapI	RAATTY	1 cut(s)	182
XceI	RCATGY	1 cut(s)	555
XcmI	CCANNNNNNNNNTGG	1 cut(s)	323
XspI	CTAG	3 cut(s)	258, 419, 678

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.