Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000141

Physical Location & Seq

Genomic Coordinates Reverse (-)

58781168 .. 58782305

Gene Structure 1138 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00124490.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1023 bp

ATGGAGTTCATCAACCAGATCAAATGTATAAGTTTGGCCCTGATCCTCATGTTGGGGGCTTGGTCTTCTGAAGCCACTTCTCGCACTCTCCAAGATGTGTCAATGTATGGGAGATATGAGCAATGGATGGCTCATCATGGACGTGCATATAGCAGCATTGATGAGAAGGAGAGTCGTTTCAAGATATTCAAAGAAAATGTGGCGTTTATAGAATCTTCCAATAACGATGCAAGCAAAACTTACAAATTAAATGTCAATCAGTTTGCAGATCTAACAAACGAAGAATTCACAGCCTTGAGCAATGGATTCAAGGGGCATGAATGTTCCACAAAGACCACTTCCTTCAGGTATGAAAATGTCACAGTGCCAGCTACGATGGACTGGAGAAGCAAAGGAGCTGTAACTCCCATCAAGGATCAAGGCCAATGCGGATGTTGTTGGGCATTTTCGGCAGTGGCAGCAATGGAAGGGATTACTCAACTTACAACGGGTAAACTAATCACGTTGTCTGAGCAAGAGCTAGTTGATTGTGATACCAGTGGTGAAGATCAAGGTTGTGAAGGTGGTTTGATGGATGATGCCTTTGAGTTTATCAATCAAAATCACGGGCTTAGTACCGAGGCAAATTATCCCTACACCGGTGTTGACGGAACATGCAATGCCCAGAAGGAAGCAAGTCATGCCGCCTCAATAACTGGCCATGAAGACGTTCCTGCAAACAGTGAAAGTGCCCTTCTTAAGGCCGTTGCAAGTCAACCTATTTCAGTTGCCATTGATGCTAGTGGATCTGATTTCCAATTCTATTCCAGTGGCGTCTTTACTGGTACCTGTGGAACAAGTTTAGACCATGGTGTTACAGCAGTTGGCTACGGTGTAAGTGATGATGGGACAAACTACTGGTTGGTGAAGAACTCATGGGGTACACAATGGGGTGAAGAAGGGTACATAAGGATGCAAAGGGATGTCGATGCAGCGGAAGGCCTTTGCGGCATTGCTATGGCAGCCTCTTACCCCACTGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000323 GO:0000325 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009505 GO:0009555 GO:0009605 GO:0009607 GO:0009620 GO:0009626 GO:0009791 GO:0009908 GO:0009987 GO:0010623 GO:0012501 GO:0012505 GO:0016787 GO:0019538 GO:0022414 GO:0030154 GO:0030163 GO:0030312 GO:0032501 GO:0032502 GO:0033554 GO:0034050 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048468 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050832 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0070011 GO:0071704 GO:0071944 GO:0090567 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I29 Peptidase_C1

Protein Analysis

340

Amino Acids

36.82

Weight (kDa)

4.56

Isoelectric Point (pI)

18.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I29	PF08246	39 - 96	2.6e-19	Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1	PF00112	122 - 339	1.5e-84	Papain family cysteine protease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22160
fragaria_vesca	FvH4_1g23580 FvH4_1g25982 FvH4_2g17070 FvH4_3g40500 FvH4_6g27180 FvH4_6g27320 FvH4_6g33300 FvH4_6g33310 FvH4_7g09480 FvH4_7g13000 FvH4_7g13320 FvH4_7g13600
malus_domestica	MD00G1208000.v1.1 MD09G1238200.v1.1 MD09G1238600.v1.1 MD09G1238800.v1.1 MD09G1239100.v1.1 MD16G1226900.v1.1 MD16G1242700.v1.1 MD16G1244200.v1.1 MD16G1245500.v1.1 MD16G1245800.v1.1 MD17G1231600.v1.1 MD17G1231700.v1.1 MD17G1231800.v1.1 MD17G1232200.v1.1 MD17G1232300.v1.1 MD17G1232400.v1.1
prunus_persica	Prupe.1G072300_v2.0.a1 Prupe.1G072400_v2.0.a1 Prupe.3G106300_v2.0.a1 Prupe.3G106400_v2.0.a1 Prupe.3G119400_v2.0.a1 Prupe.3G120600_v2.0.a1 Prupe.3G121900_v2.0.a1 Prupe.3G122000_v2.0.a1 Prupe.3G122100_v2.0.a1 Prupe.3G122200_v2.0.a1 Prupe.3G122700_v2.0.a1 Prupe.5G055900_v2.0.a1 Prupe.5G056500_v2.0.a1
pyrus_communis	pycom09g15770 pycom09g15780 pycom09g15790 pycom16g20640 pycom17g18390
rosa_chinensis	RchiOBHm_Chr1g0352141 RchiOBHm_Chr1g0352581 RchiOBHm_Chr1g0352601 RchiOBHm_Chr1g0352621 RchiOBHm_Chr1g0352631 RchiOBHm_Chr2g0119131 RchiOBHm_Chr2g0128691 RchiOBHm_Chr2g0128701 RchiOBHm_Chr2g0129151 RchiOBHm_Chr2g0129221 RchiOBHm_Chr2g0129401 RchiOBHm_Chr2g0129421 RchiOBHm_Chr2g0129431 RchiOBHm_Chr2g0129471 RchiOBHm_Chr2g0129481 RchiOBHm_Chr2g0129491 RchiOBHm_Chr2g0143051 RchiOBHm_Chr2g0143121 RchiOBHm_Chr2g0143171 RchiOBHm_Chr3g0457341 RchiOBHm_Chr5g0049011 RchiOBHm_Chr6g0281281 RchiOBHm_Chr6g0281311
rosa_laevigata	RLG00000012975 RLG00000012976 RLG00000012979 RLG00000018447 RLG00000019018 RLG00000019061 RLG00000019066 RLG00000019078 RLG00000019079 RLG00000019080 RLG00000019083 RLG00000019085 RLG00000020009 RLG00000020010 RLG00000025234 RLG00000028326 RLG00000028327 RLG00000028328 RLG00000028329 RLG00000028357 RLG00000031784
rosa_multiflora	Rmu_co8169188.1_g000001 Rmu_co8261007.1_g000001 Rmu_co8314361.1_g000001 Rmu_sc0000109.1_g000014 Rmu_sc0000638.1_g000020 Rmu_sc0000847.1_g000020 Rmu_sc0000847.1_g000028 Rmu_sc0000847.1_g000037 Rmu_sc0000847.1_g000046 Rmu_sc0000911.1_g000034 Rmu_sc0000999.1_g000021 Rmu_sc0001171.1_g000013 Rmu_sc0001171.1_g000018 Rmu_sc0001171.1_g000019 Rmu_sc0001653.1_g000004 Rmu_sc0002277.1_g000005 Rmu_sc0003479.1_g000001 Rmu_sc0005118.1_g000006 Rmu_sc0005118.1_g000008 Rmu_sc0005227.1_g000012 Rmu_sc0005442.1_g000010 Rmu_sc0005514.1_g000005 Rmu_sc0005996.1_g000014 Rmu_sc0008800.1_g000002 Rmu_sc0008800.1_g000010 Rmu_sc0008800.1_g000014
rosa_roxburghii	Rroxscaffold_1G00065560 Rroxscaffold_2G00102080 Rroxscaffold_2G00102090 Rroxscaffold_2G00102110 Rroxscaffold_2G00114560 Rroxscaffold_2G00114570 Rroxscaffold_2G00114610 Rroxscaffold_2G00114620 Rroxscaffold_2G00114640 Rroxscaffold_2G00114740 Rroxscaffold_2G00114790 Rroxscaffold_2G00115860 Rroxscaffold_2G00124490 Rroxscaffold_4G00302260 Rroxscaffold_4G00302530 Rroxscaffold_4G00302550 Rroxscaffold_4G00302560 Rroxscaffold_4G00302620 Rroxscaffold_6G00421980 Rroxscaffold_7G00187140 Rroxscaffold_7G00187170
rosa_rugosa	Rorug01G0225000 Rorug01G0230200 Rorug02G0220500 Rorug02G0280000 Rorug02G0285200 Rorug02G0285400 Rorug02G0286300 Rorug02G0286300 Rorug02G0286400 Rorug02G0286900 Rorug02G0377800 Rorug02G0377900 Rorug02G0378000 Rorug02G0378000 Rorug02G0378800 Rorug03G0019800 Rorug04G0452700 Rorug06G0140300 Rorug06G0140500 Rorug06G0140600
rosa_samantha	Rh1CG223600 Rh1CG227200 Rh1CG227500 Rh1CG227600 Rh2BG341200 Rh2BG345300 Rh2BG440200 Rh2DG284500 Rh2DG357900 Rh2DG362100 Rh2DG362600 Rh2DG364500 Rh2DG364600 Rh2DG364700 Rh2DG364800 Rh2DG364900 Rh2DG365000 Rh2DG365400 Rh2DG450400 Rh3AG080000 Rh3BG081900 Rh5AG322100 Rh5BG079800 Rh6AG252100 Rh6BG255600
rosa_wichuraiana	Rw1G020770 Rw1G021290 Rw2G022120 Rw2G026940 Rw2G027360 Rw2G027370 Rw2G027950 Rw2G027960 Rw2G027970 Rw2G035220 Rw3G006890 Rw6G021900 Rw6G021930 Rw6G021950 Rw6G021970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	824
AccB1I	GGYRCC	1 cut(s)	824
AciI	CCGC	4 cut(s)	429, 684, 974, 987
AclWI	GGATC	3 cut(s)	37, 423, 793
AcoI	YGGCCR	1 cut(s)	697
AcsI	RAATTY	1 cut(s)	284
AcuI	CTGAAG	2 cut(s)	90, 328
AcyI	GRCGYC	1 cut(s)	813
AfaI	GTAC	4 cut(s)	616, 826, 922, 944
AfiI	CCNNNNNNNGG	3 cut(s)	52, 638, 739
AflII	CTTAAG	1 cut(s)	737
AgeI	ACCGGT	1 cut(s)	638
AgsI	TTSAA	3 cut(s)	181, 190, 310
AjiI	CACGTC	1 cut(s)	143
AluBI	AGCT	3 cut(s)	371, 398, 520
AluI	AGCT	3 cut(s)	371, 398, 520
AlwI	GGATC	3 cut(s)	37, 423, 793
AoxI	GGCC	5 cut(s)	36, 421, 697, 741, 979
ApeKI	GCWGC	4 cut(s)	153, 458, 971, 1001
ApoI	RAATTY	1 cut(s)	284
ArsI	GACNNNNNNTTYG	2 cut(s)	237, 269
AsiGI	ACCGGT	1 cut(s)	638
Asp700I	GAANNNNTTC	1 cut(s)	708
Asp718I	GGTACC	1 cut(s)	824
AspS9I	GGNCC	1 cut(s)	37
AsuHPI	GGTGA	3 cut(s)	554, 916, 944
BaeGI	GKGCMC	1 cut(s)	733
BalI	TGGCCA	1 cut(s)	699
BanI	GGYRCC	1 cut(s)	824
BbsI	GAAGAC	2 cut(s)	57, 711
BbvI	GCAGC	4 cut(s)	165, 470, 983, 1013
BccI	CCATC	5 cut(s)	121, 370, 416, 565, 878
BceAI	ACGGC	1 cut(s)	728
BfaI	CTAG	2 cut(s)	521, 780
BfrI	CTTAAG	1 cut(s)	737
BglI	GCCNNNNNGGC	1 cut(s)	987
BglII	AGATCT	1 cut(s)	268
BisI	GCNGC	6 cut(s)	154, 459, 684, 972, 988, 1002
BlsI	GCNGC	6 cut(s)	155, 460, 685, 973, 989, 1003
BmgBI	CACGTC	1 cut(s)	143
BmgT120I	GGNCC	1 cut(s)	37
BmiI	GGNNCC	1 cut(s)	826
BmsI	GCATC	5 cut(s)	217, 568, 766, 942, 958
BpiI	GAAGAC	2 cut(s)	57, 711
BpmI	CTGGAG	1 cut(s)	403
BpuEI	CTTGAG	1 cut(s)	316
BsaHI	GRCGYC	1 cut(s)	813
BsaJI	CCNNGG	2 cut(s)	618, 847
BsaWI	WCCGGW	1 cut(s)	638
Bsc4I	CCNNNNNNNGG	3 cut(s)	52, 638, 739
Bse118I	RCCGGY	1 cut(s)	638
Bse1I	ACTGG	6 cut(s)	386, 537, 700, 807, 826, 902
Bse3DI	GCAATG	5 cut(s)	128, 307, 468, 664, 990
BseDI	CCNNGG	2 cut(s)	618, 847
BseGI	GGATG	5 cut(s)	132, 437, 580, 957, 967
BseLI	CCNNNNNNNGG	3 cut(s)	52, 638, 739
BseMI	GCAATG	5 cut(s)	128, 307, 468, 664, 990
BseMII	CTCAG	1 cut(s)	501
BseNI	ACTGG	6 cut(s)	386, 537, 700, 807, 826, 902
BseSI	GKGCMC	1 cut(s)	733
BseXI	GCAGC	4 cut(s)	165, 470, 983, 1013
BshFI	GGCC	5 cut(s)	38, 423, 699, 743, 981
BshNI	GGYRCC	1 cut(s)	824
BshTI	ACCGGT	1 cut(s)	638
BsiSI	CCGG	1 cut(s)	639
BslFI	GGGAC	1 cut(s)	901
BslI	CCNNNNNNNGG	3 cut(s)	52, 638, 739
BsmFI	GGGAC	1 cut(s)	901
BsnI	GGCC	5 cut(s)	38, 423, 699, 743, 981
Bsp1286I	GDGCHC	1 cut(s)	733
Bsp143I	GATC	6 cut(s)	18, 42, 268, 415, 547, 785
Bsp19I	CCATGG	1 cut(s)	847
BspACI	CCGC	4 cut(s)	429, 684, 974, 987
BspANI	GGCC	5 cut(s)	38, 423, 699, 743, 981
BspCNI	CTCAG	1 cut(s)	502
BspLI	GGNNCC	1 cut(s)	826
BspPI	GGATC	3 cut(s)	37, 423, 793
BspT107I	GGYRCC	1 cut(s)	824
BspTI	CTTAAG	1 cut(s)	737
BsrDI	GCAATG	5 cut(s)	128, 307, 468, 664, 990
BsrFI	RCCGGY	1 cut(s)	638
BsrI	ACTGG	6 cut(s)	386, 537, 700, 807, 826, 902
BssAI	RCCGGY	1 cut(s)	638
BssECI	CCNNGG	2 cut(s)	618, 847
BssMI	GATC	6 cut(s)	18, 42, 268, 415, 547, 785
BssNI	GRCGYC	1 cut(s)	813
BssT1I	CCWWGG	1 cut(s)	847
Bst4CI	ACNGT	3 cut(s)	364, 722, 872
BstACI	GRCGYC	1 cut(s)	813
BstAFI	CTTAAG	1 cut(s)	737
BstAPI	GCANNNNNTGC	1 cut(s)	680
BstC8I	GCNNGC	2 cut(s)	232, 369
BstDEI	CTNAG	2 cut(s)	510, 611
BstDSI	CCRYGG	1 cut(s)	847
BstENI	CCTNNNNNAGG	1 cut(s)	737
BstF5I	GGATG	5 cut(s)	132, 437, 580, 957, 967
BstKTI	GATC	6 cut(s)	21, 45, 271, 418, 550, 788
BstMBI	GATC	6 cut(s)	18, 42, 268, 415, 547, 785
BstMWI	GCNNNNNNNGC	6 cut(s)	449, 458, 680, 776, 987, 1001
BstNSI	RCATGY	1 cut(s)	657
BstSLI	GKGCMC	1 cut(s)	733
BstV1I	GCAGC	4 cut(s)	165, 470, 983, 1013
BstV2I	GAAGAC	2 cut(s)	57, 711
BstX2I	RGATCY	2 cut(s)	268, 785
BstYI	RGATCY	2 cut(s)	268, 785
BsuRI	GGCC	5 cut(s)	38, 423, 699, 743, 981
BtgI	CCRYGG	1 cut(s)	847
BtrI	CACGTC	1 cut(s)	143
BtsCI	GGATG	5 cut(s)	132, 437, 580, 957, 967
BtsI	GCAGTG	2 cut(s)	459, 1014
BtsIMutI	CAGTG	6 cut(s)	369, 459, 544, 727, 814, 1014
Cac8I	GCNNGC	2 cut(s)	232, 369
Cfr10I	RCCGGY	1 cut(s)	638
Cfr13I	GGNCC	1 cut(s)	37
CseI	GACGC	1 cut(s)	802
Csp6I	GTAC	4 cut(s)	615, 825, 921, 943
CspAI	ACCGGT	1 cut(s)	638
CviAII	CATG	8 cut(s)	49, 137, 317, 654, 680, 701, 848, 915
CviQI	GTAC	4 cut(s)	615, 825, 921, 943
DdeI	CTNAG	2 cut(s)	510, 611
DpnI	GATC	6 cut(s)	20, 44, 270, 417, 549, 787
DpnII	GATC	6 cut(s)	18, 42, 268, 415, 547, 785
EaeI	YGGCCR	1 cut(s)	697
Eco130I	CCWWGG	1 cut(s)	847
Eco147I	AGGCCT	1 cut(s)	981
Eco57I	CTGAAG	2 cut(s)	90, 328
EcoNI	CCTNNNNNAGG	1 cut(s)	737
EcoRI	GAATTC	1 cut(s)	284
EcoT14I	CCWWGG	1 cut(s)	847
ErhI	CCWWGG	1 cut(s)	847
FaeI	CATG	8 cut(s)	52, 140, 320, 657, 683, 704, 851, 918
FalI	AAGNNNNNCTT	2 cut(s)	223, 255
FaqI	GGGAC	1 cut(s)	901
FatI	CATG	8 cut(s)	48, 136, 316, 653, 679, 700, 847, 914
Fnu4HI	GCNGC	6 cut(s)	154, 459, 684, 972, 988, 1002
FokI	GGATG	5 cut(s)	139, 444, 587, 964, 974
Fsp4HI	GCNGC	6 cut(s)	154, 459, 684, 972, 988, 1002
FspBI	CTAG	2 cut(s)	521, 780
GluI	GCNGC	6 cut(s)	154, 459, 684, 972, 988, 1002
GsuI	CTGGAG	1 cut(s)	403
HaeIII	GGCC	5 cut(s)	38, 423, 699, 743, 981
HapII	CCGG	1 cut(s)	639
HgaI	GACGC	1 cut(s)	802
Hin1I	GRCGYC	1 cut(s)	813
Hin1II	CATG	8 cut(s)	52, 140, 320, 657, 683, 704, 851, 918
HincII	GTYRAC	2 cut(s)	646, 755
HindII	GTYRAC	2 cut(s)	646, 755
HinfI	GANTC	3 cut(s)	172, 212, 306
HpaII	CCGG	1 cut(s)	639
HphI	GGTGA	3 cut(s)	554, 916, 944
Hpy166II	GTNNAC	4 cut(s)	494, 646, 755, 923
Hpy188I	TCNGA	3 cut(s)	70, 511, 790
Hpy188III	TCNNGA	1 cut(s)	181
Hpy8I	GTNNAC	4 cut(s)	494, 646, 755, 923
HpyAV	CCTTC	8 cut(s)	160, 352, 461, 554, 661, 743, 932, 971
HpyCH4III	ACNGT	3 cut(s)	364, 722, 872
HpyCH4IV	ACGT	3 cut(s)	142, 503, 708
HpyCH4V	TGCA	9 cut(s)	146, 230, 266, 657, 716, 749, 955, 971, 1019
HpyF10VI	GCNNNNNNNGC	6 cut(s)	449, 458, 680, 776, 987, 1001
HpyF3I	CTNAG	2 cut(s)	510, 611
HpySE526I	ACGT	3 cut(s)	142, 503, 708
Hsp92I	GRCGYC	1 cut(s)	813
Hsp92II	CATG	8 cut(s)	52, 140, 320, 657, 683, 704, 851, 918
KpnI	GGTACC	1 cut(s)	828
Kzo9I	GATC	6 cut(s)	18, 42, 268, 415, 547, 785
LmnI	GCTCC	1 cut(s)	395
Lsp1109I	GCAGC	4 cut(s)	165, 470, 983, 1013
LweI	GCATC	5 cut(s)	217, 568, 766, 942, 958
MaeI	CTAG	2 cut(s)	521, 780
MaeII	ACGT	3 cut(s)	142, 503, 708
MaeIII	GTNAC	3 cut(s)	358, 400, 853
MalI	GATC	6 cut(s)	20, 44, 270, 417, 549, 787
MboI	GATC	6 cut(s)	18, 42, 268, 415, 547, 785
MboII	GAAGA	7 cut(s)	57, 207, 293, 557, 716, 919, 947
MflI	RGATCY	2 cut(s)	268, 785
MhlI	GDGCHC	1 cut(s)	733
MlsI	TGGCCA	1 cut(s)	699
MluCI	AATT	4 cut(s)	245, 284, 625, 797
MluNI	TGGCCA	1 cut(s)	699
MlyI	GAGTC	1 cut(s)	181
MnlI	CCTC	4 cut(s)	56, 613, 697, 1015
Mox20I	TGGCCA	1 cut(s)	699
MroXI	GAANNNNTTC	1 cut(s)	708
MscI	TGGCCA	1 cut(s)	699
MseI	TTAA	2 cut(s)	248, 738
MslI	CAYNNNNRTG	3 cut(s)	141, 950, 995
Msp20I	TGGCCA	1 cut(s)	699
MspA1I	CMGCKG	1 cut(s)	974
MspCI	CTTAAG	1 cut(s)	737
MspI	CCGG	1 cut(s)	639
MwoI	GCNNNNNNNGC	6 cut(s)	449, 458, 680, 776, 987, 1001
NcoI	CCATGG	1 cut(s)	847
NdeII	GATC	6 cut(s)	18, 42, 268, 415, 547, 785
NlaIII	CATG	8 cut(s)	52, 140, 320, 657, 683, 704, 851, 918
NlaIV	GGNNCC	1 cut(s)	826
NmuCI	GTSAC	1 cut(s)	358
NspI	RCATGY	1 cut(s)	657
PceI	AGGCCT	1 cut(s)	981
PdmI	GAANNNNTTC	1 cut(s)	708
PfeI	GAWTC	2 cut(s)	212, 306
PinAI	ACCGGT	1 cut(s)	638
PkrI	GCNGC	6 cut(s)	155, 460, 685, 973, 989, 1003
PleI	GAGTC	1 cut(s)	180
PpsI	GAGTC	1 cut(s)	180
PspN4I	GGNNCC	1 cut(s)	826
PspPI	GGNCC	1 cut(s)	37
PsuI	RGATCY	2 cut(s)	268, 785
RsaI	GTAC	4 cut(s)	616, 826, 922, 944
RsaNI	GTAC	4 cut(s)	615, 825, 921, 943
RseI	CAYNNNNRTG	3 cut(s)	141, 950, 995
SaqAI	TTAA	2 cut(s)	248, 738
SatI	GCNGC	6 cut(s)	154, 459, 684, 972, 988, 1002
Sau3AI	GATC	6 cut(s)	18, 42, 268, 415, 547, 785
Sau96I	GGNCC	1 cut(s)	37
SchI	GAGTC	1 cut(s)	181
SduI	GDGCHC	1 cut(s)	733
SfaNI	GCATC	5 cut(s)	217, 568, 766, 942, 958
SgrAI	CRCCGGYG	1 cut(s)	638
SmiMI	CAYNNNNRTG	3 cut(s)	141, 950, 995
SmlI	CTYRAG	2 cut(s)	295, 737
SmoI	CTYRAG	2 cut(s)	295, 737
Sse9I	AATT	4 cut(s)	245, 284, 625, 797
SseBI	AGGCCT	1 cut(s)	981
SsiI	CCGC	4 cut(s)	429, 684, 974, 987
SspMI	CTAG	2 cut(s)	521, 780
StuI	AGGCCT	1 cut(s)	981
StyI	CCWWGG	1 cut(s)	847
TaaI	ACNGT	3 cut(s)	364, 722, 872
TaiI	ACGT	3 cut(s)	145, 506, 711
TaqI	TCGA	1 cut(s)	966
TasI	AATT	4 cut(s)	245, 284, 625, 797
TauI	GCSGC	2 cut(s)	686, 990
TfiI	GAWTC	2 cut(s)	212, 306
Tru1I	TTAA	2 cut(s)	248, 738
Tru9I	TTAA	2 cut(s)	248, 738
TscAI	CASTG	6 cut(s)	369, 459, 544, 727, 814, 1021
TseFI	GTSAC	1 cut(s)	358
TseI	GCWGC	4 cut(s)	153, 458, 971, 1001
Tsp45I	GTSAC	1 cut(s)	358
TspDTI	ATGAA	3 cut(s)	333, 366, 717
TspGWI	ACGGA	1 cut(s)	663
TspRI	CASTG	6 cut(s)	369, 459, 544, 727, 814, 1021
Vha464I	CTTAAG	1 cut(s)	737
XagI	CCTNNNNNAGG	1 cut(s)	737
XapI	RAATTY	1 cut(s)	284
XceI	RCATGY	1 cut(s)	657
XmnI	GAANNNNTTC	1 cut(s)	708
XspI	CTAG	2 cut(s)	521, 780

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.