Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000141

Physical Location & Seq

Genomic Coordinates Reverse (-)

20925748 .. 20926837

Gene Structure 1090 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g27320.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 975 bp

ATGTTGGGGGCCTGGTCTTCTGAAGCTACTTCCCGCAGTCTCCAAGATGTAATAATGTATGGCAGATACGAGCAATGGATGGCTCGTTATGAACGTGTATACAGTGACTTTGACGAGAAGGAGAAGCGCTTCCAGATATTCAAGGAAAATGTTGCTTTTGTAGAATCTTCCAATGGCGAAGCAAACAAACCTTACAAATTAAGCGTCAATAGATTTGCAGACCTTACAAATGAAGAGTTTACAGCCTCAAGAAATCGGTTCAAGGGGCATGAGTGTTCCACAGAGACCACTTCTTACAAATATGAAAACGTTACTGTGCCAGCTACAATGGACTGGAGACAGAAAGGAGCTGTGACTCCCATCAAGGACCAAGGCCAATGTGGATGCTGTTGGGCATTTTCAGCAGTAGCAGCCATGGAAGGAATCACTCAACTAACAACTGGTAAATTGATTTCTTTGTCCGAACAAGAGTTAGTTGACTGTGATGTCAATGGTGAAGACCAAGGGTGTGAGGGAGGCTTGATGGATGATGCATTTCAGTTCATCAATCAAAATCATGGACTTAGTACTGAGGCTAATTACCCCTATACTGGTGTTGATGGTACATGCAATGCGCAGAAGGAAGCAAGCCATGCAGCCTCAATCACTGGCCACGAAGATGTGCCTGCAAATAGTGAAAGTGCACTGCTTAAGGCTGTTGCCAATCAACCTATTTCTGTTGCCATTGATGCTAGTGGATCCGATTTCCAATTCTATTCAAGTGGTGTATTCACAGGAACCTGCGGAACAAGCCTAGACCATGGTGTTACTGCTGTTGGTTATGGCGTCAGCGATAATGGGACTAAGTATTGGTTGGTAAAGAACTCATGGGGGGCAGAATGGGGTGAAGGAGGTTACATAAGAATGCAAAGAGATGTTGATGCACAGGAAGGTCTCTGTGGCATTGCTATGGCAGCCTCTTACCCAACTGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000323 GO:0000325 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009505 GO:0009555 GO:0009605 GO:0009607 GO:0009620 GO:0009626 GO:0009791 GO:0009908 GO:0009987 GO:0010623 GO:0012501 GO:0012505 GO:0016787 GO:0019538 GO:0022414 GO:0030154 GO:0030163 GO:0030312 GO:0032501 GO:0032502 GO:0033554 GO:0034050 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048468 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050832 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0070011 GO:0071704 GO:0071944 GO:0090567 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I29 Peptidase_C1

Protein Analysis

325

Amino Acids

35.39

Weight (kDa)

4.62

Isoelectric Point (pI)

19.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I29	PF08246	23 - 80	4e-18	Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1	PF00112	106 - 323	3.5e-84	Papain family cysteine protease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22160
fragaria_vesca	FvH4_1g23580 FvH4_1g25982 FvH4_2g17070 FvH4_3g40500 FvH4_6g27180 FvH4_6g27320 FvH4_6g33300 FvH4_6g33310 FvH4_7g09480 FvH4_7g13000 FvH4_7g13320 FvH4_7g13600
malus_domestica	MD00G1208000.v1.1 MD09G1238200.v1.1 MD09G1238600.v1.1 MD09G1238800.v1.1 MD09G1239100.v1.1 MD16G1226900.v1.1 MD16G1242700.v1.1 MD16G1244200.v1.1 MD16G1245500.v1.1 MD16G1245800.v1.1 MD17G1231600.v1.1 MD17G1231700.v1.1 MD17G1231800.v1.1 MD17G1232200.v1.1 MD17G1232300.v1.1 MD17G1232400.v1.1
prunus_persica	Prupe.1G072300_v2.0.a1 Prupe.1G072400_v2.0.a1 Prupe.3G106300_v2.0.a1 Prupe.3G106400_v2.0.a1 Prupe.3G119400_v2.0.a1 Prupe.3G120600_v2.0.a1 Prupe.3G121900_v2.0.a1 Prupe.3G122000_v2.0.a1 Prupe.3G122100_v2.0.a1 Prupe.3G122200_v2.0.a1 Prupe.3G122700_v2.0.a1 Prupe.5G055900_v2.0.a1 Prupe.5G056500_v2.0.a1
pyrus_communis	pycom09g15770 pycom09g15780 pycom09g15790 pycom16g20640 pycom17g18390
rosa_chinensis	RchiOBHm_Chr1g0352141 RchiOBHm_Chr1g0352581 RchiOBHm_Chr1g0352601 RchiOBHm_Chr1g0352621 RchiOBHm_Chr1g0352631 RchiOBHm_Chr2g0119131 RchiOBHm_Chr2g0128691 RchiOBHm_Chr2g0128701 RchiOBHm_Chr2g0129151 RchiOBHm_Chr2g0129221 RchiOBHm_Chr2g0129401 RchiOBHm_Chr2g0129421 RchiOBHm_Chr2g0129431 RchiOBHm_Chr2g0129471 RchiOBHm_Chr2g0129481 RchiOBHm_Chr2g0129491 RchiOBHm_Chr2g0143051 RchiOBHm_Chr2g0143121 RchiOBHm_Chr2g0143171 RchiOBHm_Chr3g0457341 RchiOBHm_Chr5g0049011 RchiOBHm_Chr6g0281281 RchiOBHm_Chr6g0281311
rosa_laevigata	RLG00000012975 RLG00000012976 RLG00000012979 RLG00000018447 RLG00000019018 RLG00000019061 RLG00000019066 RLG00000019078 RLG00000019079 RLG00000019080 RLG00000019083 RLG00000019085 RLG00000020009 RLG00000020010 RLG00000025234 RLG00000028326 RLG00000028327 RLG00000028328 RLG00000028329 RLG00000028357 RLG00000031784
rosa_multiflora	Rmu_co8169188.1_g000001 Rmu_co8261007.1_g000001 Rmu_co8314361.1_g000001 Rmu_sc0000109.1_g000014 Rmu_sc0000638.1_g000020 Rmu_sc0000847.1_g000020 Rmu_sc0000847.1_g000028 Rmu_sc0000847.1_g000037 Rmu_sc0000847.1_g000046 Rmu_sc0000911.1_g000034 Rmu_sc0000999.1_g000021 Rmu_sc0001171.1_g000013 Rmu_sc0001171.1_g000018 Rmu_sc0001171.1_g000019 Rmu_sc0001653.1_g000004 Rmu_sc0002277.1_g000005 Rmu_sc0003479.1_g000001 Rmu_sc0005118.1_g000006 Rmu_sc0005118.1_g000008 Rmu_sc0005227.1_g000012 Rmu_sc0005442.1_g000010 Rmu_sc0005514.1_g000005 Rmu_sc0005996.1_g000014 Rmu_sc0008800.1_g000002 Rmu_sc0008800.1_g000010 Rmu_sc0008800.1_g000014
rosa_roxburghii	Rroxscaffold_1G00065560 Rroxscaffold_2G00102080 Rroxscaffold_2G00102090 Rroxscaffold_2G00102110 Rroxscaffold_2G00114560 Rroxscaffold_2G00114570 Rroxscaffold_2G00114610 Rroxscaffold_2G00114620 Rroxscaffold_2G00114640 Rroxscaffold_2G00114740 Rroxscaffold_2G00114790 Rroxscaffold_2G00115860 Rroxscaffold_2G00124490 Rroxscaffold_4G00302260 Rroxscaffold_4G00302530 Rroxscaffold_4G00302550 Rroxscaffold_4G00302560 Rroxscaffold_4G00302620 Rroxscaffold_6G00421980 Rroxscaffold_7G00187140 Rroxscaffold_7G00187170
rosa_rugosa	Rorug01G0225000 Rorug01G0230200 Rorug02G0220500 Rorug02G0280000 Rorug02G0285200 Rorug02G0285400 Rorug02G0286300 Rorug02G0286300 Rorug02G0286400 Rorug02G0286900 Rorug02G0377800 Rorug02G0377900 Rorug02G0378000 Rorug02G0378000 Rorug02G0378800 Rorug03G0019800 Rorug04G0452700 Rorug06G0140300 Rorug06G0140500 Rorug06G0140600
rosa_samantha	Rh1CG223600 Rh1CG227200 Rh1CG227500 Rh1CG227600 Rh2BG341200 Rh2BG345300 Rh2BG440200 Rh2DG284500 Rh2DG357900 Rh2DG362100 Rh2DG362600 Rh2DG364500 Rh2DG364600 Rh2DG364700 Rh2DG364800 Rh2DG364900 Rh2DG365000 Rh2DG365400 Rh2DG450400 Rh3AG080000 Rh3BG081900 Rh5AG322100 Rh5BG079800 Rh6AG252100 Rh6BG255600
rosa_wichuraiana	Rw1G020770 Rw1G021290 Rw2G022120 Rw2G026940 Rw2G027360 Rw2G027370 Rw2G027950 Rw2G027960 Rw2G027970 Rw2G035220 Rw3G006890 Rw6G021900 Rw6G021930 Rw6G021950 Rw6G021970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	485
Acc16I	TGCGCA	1 cut(s)	615
Acc36I	ACCTGC	1 cut(s)	788
AccI	GTMKAC	1 cut(s)	99
AciI	CCGC	2 cut(s)	34, 783
AclI	AACGTT	1 cut(s)	309
AclWI	GGATC	2 cut(s)	732, 745
AcoI	YGGCCR	1 cut(s)	649
AcuI	CTGAAG	1 cut(s)	42
AcyI	GRCGYC	1 cut(s)	825
AfaI	GTAC	2 cut(s)	568, 604
AfeI	AGCGCT	1 cut(s)	128
AfiI	CCNNNNNNNGG	1 cut(s)	590
AflII	CTTAAG	1 cut(s)	689
AflIII	ACRYGT	1 cut(s)	94
AgsI	TTSAA	3 cut(s)	142, 262, 759
AjnI	CCWGG	1 cut(s)	11
AluBI	AGCT	3 cut(s)	26, 323, 350
AluI	AGCT	3 cut(s)	26, 323, 350
Alw21I	GWGCWC	1 cut(s)	685
Alw26I	GTCTC	4 cut(s)	44, 278, 331, 938
Alw44I	GTGCAC	1 cut(s)	681
AlwI	GGATC	2 cut(s)	732, 745
Aor51HI	AGCGCT	1 cut(s)	128
AoxI	GGCC	3 cut(s)	9, 373, 649
ApaLI	GTGCAC	1 cut(s)	681
ApeKI	GCWGC	3 cut(s)	410, 635, 953
ArsI	GACNNNNNNTTYG	2 cut(s)	189, 221
Asp700I	GAANNNNTTC	1 cut(s)	128
AspLEI	GCGC	2 cut(s)	129, 616
AspS9I	GGNCC	2 cut(s)	9, 367
AsuHPI	GGTGA	2 cut(s)	506, 896
AvaII	GGWCC	1 cut(s)	367
BaeGI	GKGCMC	1 cut(s)	685
BalI	TGGCCA	1 cut(s)	651
BamHI	GGATCC	1 cut(s)	737
BbsI	GAAGAC	2 cut(s)	9, 504
Bbv12I	GWGCWC	1 cut(s)	685
BbvI	GCAGC	3 cut(s)	422, 647, 965
BccI	CCATC	4 cut(s)	73, 368, 517, 593
BciT130I	CCWGG	1 cut(s)	13
BcoDI	GTCTC	4 cut(s)	44, 278, 331, 938
BfaI	CTAG	2 cut(s)	732, 794
BfoI	RGCGCY	1 cut(s)	130
BfrI	CTTAAG	1 cut(s)	689
BfuAI	ACCTGC	1 cut(s)	788
BisI	GCNGC	3 cut(s)	411, 636, 954
BlsI	GCNGC	3 cut(s)	412, 637, 955
BmcAI	AGTACT	1 cut(s)	568
Bme1390I	CCNGG	1 cut(s)	13
Bme18I	GGWCC	1 cut(s)	367
BmgT120I	GGNCC	2 cut(s)	9, 367
BmiI	GGNNCC	3 cut(s)	10, 739, 778
BmrFI	CCNGG	1 cut(s)	13
BmsI	GCATC	4 cut(s)	374, 520, 718, 910
BpiI	GAAGAC	2 cut(s)	9, 504
BpmI	CTGGAG	1 cut(s)	355
BpuEI	CTTGAG	1 cut(s)	232
BsaHI	GRCGYC	1 cut(s)	825
BsaI	GGTCTC	2 cut(s)	278, 938
BsaJI	CCNNGG	4 cut(s)	370, 414, 502, 799
Bsc4I	CCNNNNNNNGG	1 cut(s)	590
Bse1I	ACTGG	4 cut(s)	338, 445, 595, 652
Bse3DI	GCAATG	3 cut(s)	80, 616, 942
BseBI	CCWGG	1 cut(s)	13
BseDI	CCNNGG	4 cut(s)	370, 414, 502, 799
BseGI	GGATG	3 cut(s)	84, 389, 532
BseLI	CCNNNNNNNGG	1 cut(s)	590
BseMI	GCAATG	3 cut(s)	80, 616, 942
BseMII	CTCAG	1 cut(s)	561
BseNI	ACTGG	4 cut(s)	338, 445, 595, 652
BseSI	GKGCMC	1 cut(s)	685
BseXI	GCAGC	3 cut(s)	422, 647, 965
BshFI	GGCC	3 cut(s)	11, 375, 651
BsiHKAI	GWGCWC	1 cut(s)	685
BslFI	GGGAC	1 cut(s)	853
BslI	CCNNNNNNNGG	1 cut(s)	590
BsmAI	GTCTC	4 cut(s)	44, 278, 331, 938
BsmFI	GGGAC	1 cut(s)	853
BsmI	GAATGC	1 cut(s)	909
BsnI	GGCC	3 cut(s)	11, 375, 651
Bso31I	GGTCTC	2 cut(s)	278, 938
Bsp1286I	GDGCHC	1 cut(s)	685
Bsp143I	GATC	1 cut(s)	737
Bsp19I	CCATGG	2 cut(s)	414, 799
BspACI	CCGC	2 cut(s)	34, 783
BspANI	GGCC	3 cut(s)	11, 375, 651
BspCNI	CTCAG	1 cut(s)	562
BspLI	GGNNCC	3 cut(s)	10, 739, 778
BspMI	ACCTGC	1 cut(s)	788
BspPI	GGATC	2 cut(s)	732, 745
BspTI	CTTAAG	1 cut(s)	689
BspTNI	GGTCTC	2 cut(s)	278, 938
BsrDI	GCAATG	3 cut(s)	80, 616, 942
BsrI	ACTGG	4 cut(s)	338, 445, 595, 652
BssECI	CCNNGG	4 cut(s)	370, 414, 502, 799
BssMI	GATC	1 cut(s)	737
BssNAI	GTATAC	1 cut(s)	100
BssNI	GRCGYC	1 cut(s)	825
BssT1I	CCWWGG	4 cut(s)	370, 414, 502, 799
Bst1107I	GTATAC	1 cut(s)	100
Bst2UI	CCWGG	1 cut(s)	13
Bst4CI	ACNGT	3 cut(s)	104, 316, 482
Bst6I	CTCTTC	1 cut(s)	228
BstACI	GRCGYC	1 cut(s)	825
BstAFI	CTTAAG	1 cut(s)	689
BstAPI	GCANNNNNTGC	1 cut(s)	632
BstC8I	GCNNGC	3 cut(s)	321, 628, 666
BstDEI	CTNAG	3 cut(s)	563, 570, 843
BstDSI	CCRYGG	2 cut(s)	414, 799
BstF5I	GGATG	3 cut(s)	84, 389, 532
BstH2I	RGCGCY	1 cut(s)	130
BstHHI	GCGC	2 cut(s)	129, 616
BstKTI	GATC	1 cut(s)	740
BstMAI	GTCTC	4 cut(s)	44, 278, 331, 938
BstMBI	GATC	1 cut(s)	737
BstMWI	GCNNNNNNNGC	6 cut(s)	401, 410, 632, 728, 789, 953
BstNI	CCWGG	1 cut(s)	13
BstNSI	RCATGY	1 cut(s)	609
BstSCI	CCNGG	1 cut(s)	11
BstSLI	GKGCMC	1 cut(s)	685
BstV1I	GCAGC	3 cut(s)	422, 647, 965
BstV2I	GAAGAC	2 cut(s)	9, 504
BstX2I	RGATCY	1 cut(s)	737
BstYI	RGATCY	1 cut(s)	737
BstZ17I	GTATAC	1 cut(s)	100
BsuRI	GGCC	3 cut(s)	11, 375, 651
BtgI	CCRYGG	2 cut(s)	414, 799
BtsCI	GGATG	3 cut(s)	84, 389, 532
BtsI	GCAGTG	1 cut(s)	683
BtsIMutI	CAGTG	3 cut(s)	109, 645, 683
BveI	ACCTGC	1 cut(s)	788
Cac8I	GCNNGC	3 cut(s)	321, 628, 666
CfoI	GCGC	2 cut(s)	129, 616
Cfr13I	GGNCC	2 cut(s)	9, 367
CseI	GACGC	2 cut(s)	193, 814
Csp6I	GTAC	2 cut(s)	567, 603
CviAII	CATG	7 cut(s)	269, 415, 557, 606, 632, 800, 867
CviQI	GTAC	2 cut(s)	567, 603
DdeI	CTNAG	3 cut(s)	563, 570, 843
DpnI	GATC	1 cut(s)	739
DpnII	GATC	1 cut(s)	737
DrdI	GACNNNNNNGTC	1 cut(s)	485
DseDI	GACNNNNNNGTC	1 cut(s)	485
EaeI	YGGCCR	1 cut(s)	649
Eam1104I	CTCTTC	1 cut(s)	228
EarI	CTCTTC	1 cut(s)	228
Eco130I	CCWWGG	4 cut(s)	370, 414, 502, 799
Eco31I	GGTCTC	2 cut(s)	278, 938
Eco47I	GGWCC	1 cut(s)	367
Eco47III	AGCGCT	1 cut(s)	128
Eco57I	CTGAAG	1 cut(s)	42
EcoO109I	RGGNCCY	1 cut(s)	9
EcoRII	CCWGG	1 cut(s)	11
EcoT14I	CCWWGG	4 cut(s)	370, 414, 502, 799
EcoT22I	ATGCAT	1 cut(s)	535
ErhI	CCWWGG	4 cut(s)	370, 414, 502, 799
FaeI	CATG	7 cut(s)	272, 418, 560, 609, 635, 803, 870
FaqI	GGGAC	1 cut(s)	853
FatI	CATG	7 cut(s)	268, 414, 556, 605, 631, 799, 866
FauI	CCCGC	1 cut(s)	41
FblI	GTMKAC	1 cut(s)	99
Fnu4HI	GCNGC	3 cut(s)	411, 636, 954
FokI	GGATG	3 cut(s)	91, 396, 539
Fsp4HI	GCNGC	3 cut(s)	411, 636, 954
FspBI	CTAG	2 cut(s)	732, 794
FspI	TGCGCA	1 cut(s)	615
GlaI	GCGC	2 cut(s)	128, 615
GluI	GCNGC	3 cut(s)	411, 636, 954
GsuI	CTGGAG	1 cut(s)	355
HaeII	RGCGCY	1 cut(s)	130
HaeIII	GGCC	3 cut(s)	11, 375, 651
HgaI	GACGC	2 cut(s)	193, 814
HhaI	GCGC	2 cut(s)	129, 616
Hin1I	GRCGYC	1 cut(s)	825
Hin1II	CATG	7 cut(s)	272, 418, 560, 609, 635, 803, 870
Hin6I	GCGC	2 cut(s)	127, 614
HinP1I	GCGC	2 cut(s)	127, 614
HincII	GTYRAC	1 cut(s)	478
HindII	GTYRAC	1 cut(s)	478
HinfI	GANTC	3 cut(s)	164, 355, 423
HphI	GGTGA	2 cut(s)	506, 896
Hpy166II	GTNNAC	4 cut(s)	100, 240, 478, 683
Hpy188I	TCNGA	3 cut(s)	22, 463, 742
Hpy188III	TCNNGA	2 cut(s)	133, 249
Hpy8I	GTNNAC	4 cut(s)	100, 240, 478, 683
HpyAV	CCTTC	5 cut(s)	112, 413, 613, 881, 923
HpyCH4III	ACNGT	3 cut(s)	104, 316, 482
HpyCH4IV	ACGT	2 cut(s)	94, 309
HpyCH4V	TGCA	8 cut(s)	218, 533, 609, 635, 668, 683, 907, 923
HpyF10VI	GCNNNNNNNGC	6 cut(s)	401, 410, 632, 728, 789, 953
HpyF3I	CTNAG	3 cut(s)	563, 570, 843
HpySE526I	ACGT	2 cut(s)	94, 309
Hsp92I	GRCGYC	1 cut(s)	825
Hsp92II	CATG	7 cut(s)	272, 418, 560, 609, 635, 803, 870
HspAI	GCGC	2 cut(s)	127, 614
Kzo9I	GATC	1 cut(s)	737
LmnI	GCTCC	1 cut(s)	347
Lsp1109I	GCAGC	3 cut(s)	422, 647, 965
LweI	GCATC	4 cut(s)	374, 520, 718, 910
MaeI	CTAG	2 cut(s)	732, 794
MaeII	ACGT	2 cut(s)	94, 309
MaeIII	GTNAC	5 cut(s)	104, 310, 352, 805, 893
MalI	GATC	1 cut(s)	739
MboI	GATC	1 cut(s)	737
MboII	GAAGA	5 cut(s)	9, 159, 245, 509, 668
MflI	RGATCY	1 cut(s)	737
MhlI	GDGCHC	1 cut(s)	685
MlsI	TGGCCA	1 cut(s)	651
MluCI	AATT	4 cut(s)	197, 446, 577, 749
MluNI	TGGCCA	1 cut(s)	651
MlyI	GAGTC	1 cut(s)	349
MnlI	CCTC	7 cut(s)	256, 505, 509, 565, 649, 884, 967
Mox20I	TGGCCA	1 cut(s)	651
Mph1103I	ATGCAT	1 cut(s)	535
MroXI	GAANNNNTTC	1 cut(s)	128
MscI	TGGCCA	1 cut(s)	651
MseI	TTAA	2 cut(s)	200, 690
MslI	CAYNNNNRTG	3 cut(s)	657, 902, 947
Msp20I	TGGCCA	1 cut(s)	651
MspCI	CTTAAG	1 cut(s)	689
MspR9I	CCNGG	1 cut(s)	13
Mva1269I	GAATGC	1 cut(s)	909
MvaI	CCWGG	1 cut(s)	13
MwoI	GCNNNNNNNGC	6 cut(s)	401, 410, 632, 728, 789, 953
NcoI	CCATGG	2 cut(s)	414, 799
NdeII	GATC	1 cut(s)	737
NlaIII	CATG	7 cut(s)	272, 418, 560, 609, 635, 803, 870
NlaIV	GGNNCC	3 cut(s)	10, 739, 778
NmuCI	GTSAC	2 cut(s)	104, 352
NsbI	TGCGCA	1 cut(s)	615
NsiI	ATGCAT	1 cut(s)	535
NspI	RCATGY	1 cut(s)	609
PcsI	WCGNNNNNNNCGW	1 cut(s)	91
PctI	GAATGC	1 cut(s)	909
PdmI	GAANNNNTTC	1 cut(s)	128
PfeI	GAWTC	2 cut(s)	164, 423
PkrI	GCNGC	3 cut(s)	412, 637, 955
PleI	GAGTC	1 cut(s)	349
PpsI	GAGTC	1 cut(s)	349
Psp1406I	AACGTT	1 cut(s)	309
Psp6I	CCWGG	1 cut(s)	11
PspGI	CCWGG	1 cut(s)	11
PspN4I	GGNNCC	3 cut(s)	10, 739, 778
PspPI	GGNCC	2 cut(s)	9, 367
PsuI	RGATCY	1 cut(s)	737
RsaI	GTAC	2 cut(s)	568, 604
RsaNI	GTAC	2 cut(s)	567, 603
RseI	CAYNNNNRTG	3 cut(s)	657, 902, 947
SaqAI	TTAA	2 cut(s)	200, 690
SatI	GCNGC	3 cut(s)	411, 636, 954
Sau3AI	GATC	1 cut(s)	737
Sau96I	GGNCC	2 cut(s)	9, 367
ScaI	AGTACT	1 cut(s)	568
SchI	GAGTC	1 cut(s)	349
ScrFI	CCNGG	1 cut(s)	13
SduI	GDGCHC	1 cut(s)	685
SfaNI	GCATC	4 cut(s)	374, 520, 718, 910
SinI	GGWCC	1 cut(s)	367
SmiMI	CAYNNNNRTG	3 cut(s)	657, 902, 947
SmlI	CTYRAG	2 cut(s)	247, 689
SmoI	CTYRAG	2 cut(s)	247, 689
Sse9I	AATT	4 cut(s)	197, 446, 577, 749
SsiI	CCGC	2 cut(s)	34, 783
SspMI	CTAG	2 cut(s)	732, 794
StyD4I	CCNGG	1 cut(s)	11
StyI	CCWWGG	4 cut(s)	370, 414, 502, 799
TaaI	ACNGT	3 cut(s)	104, 316, 482
TaiI	ACGT	2 cut(s)	97, 312
TasI	AATT	4 cut(s)	197, 446, 577, 749
TatI	WGTACW	1 cut(s)	566
TfiI	GAWTC	2 cut(s)	164, 423
Tru1I	TTAA	2 cut(s)	200, 690
Tru9I	TTAA	2 cut(s)	200, 690
TscAI	CASTG	3 cut(s)	109, 652, 690
TseFI	GTSAC	2 cut(s)	104, 352
TseI	GCWGC	3 cut(s)	410, 635, 953
Tsp45I	GTSAC	2 cut(s)	104, 352
TspDTI	ATGAA	4 cut(s)	105, 246, 318, 532
TspRI	CASTG	3 cut(s)	109, 652, 690
Vha464I	CTTAAG	1 cut(s)	689
VneI	GTGCAC	1 cut(s)	681
VpaK11BI	GGWCC	1 cut(s)	367
XceI	RCATGY	1 cut(s)	609
XcmI	CCANNNNNNNNNTGG	1 cut(s)	377
XmiI	GTMKAC	1 cut(s)	99
XmnI	GAANNNNTTC	1 cut(s)	128
XspI	CTAG	2 cut(s)	732, 794
ZrmI	AGTACT	1 cut(s)	568
Zsp2I	ATGCAT	1 cut(s)	535

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.