Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0000141

Physical Location & Seq

Genomic Coordinates Reverse (-)

6796085 .. 6797294

Gene Structure 1210 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG079800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 735 bp

ATGCTGAAGCGGCACGAGGAGTGGGTAGCTCGACATGGACGAGTTTACAAGGATGCAGAAGAGAAGGTGAAGCGCTTTTTGATCTTCAAGATCAACGTCGAGTTCATAGAAGCTTTTAACAAACAGATGGAGTACCAAGAGTACACACTGAGTTTAAACGAATTTGGAGACCTAACTAACGAGGAGTTTCGAGCAATGCGTAATGGCTTCAAGAGGCAATCCTTGTCCAACTCCCTGAAAGCTACAAGTTTTAGGTATGGAAATGGTGTTGTTGGGCATTTTCAGCAGTTGCAGCTACAGAAGGGATCAATCAGCTTAAAACGCTTAATTCCTCTAGGAGAGCAAGAGCTTGTGGATTGTGACACTGGAGGCAAAGATCACTTTTGTAAAGGTGGTCTAATGGATAATGCCTTCCAATTCATCCAAAGCAACAAGGGCCTAACAACTGAAGCCAATTACCCCTACCAGGGTGTTGACAGAAGTTGCAAAACTCAGAATGCTACATCCCAAGCAGCCTCCATCACTGGGCACGAGGATGTGCCTAAAAACGACGAGAATGCTCTGCTGCAGGCAGTCGCCAACCTGCCTGTTTCTGTTGCCATCGATGCAAGTGGATCCGCGTTTCAGTTTTATTCGAGATGGGGAGAGAGTGGATATGTAAGGATGCAAAGGGATGTTCCTGCCATGGAAGGACTCTGTGGAATTGCTATGGACGCTTCTTATCCGACCGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000323 GO:0000325 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009505 GO:0009555 GO:0009605 GO:0009607 GO:0009620 GO:0009626 GO:0009791 GO:0009908 GO:0009987 GO:0010623 GO:0012501 GO:0012505 GO:0016787 GO:0019538 GO:0022414 GO:0030154 GO:0030163 GO:0030312 GO:0032501 GO:0032502 GO:0033554 GO:0034050 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048468 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050832 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0070011 GO:0071704 GO:0071944 GO:0090567 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04140 ko04142 ko04145 ko04210 ko04612 ko05205 ko05323 ko05418 map04140 map04142 map04145 map04210 map04612 map05205 map05323 map05418

Pfam Domains

Protein Families

Inhibitor_I29 Peptidase_C1

Protein Analysis

244

Amino Acids

27.43

Weight (kDa)

6.23

Isoelectric Point (pI)

38.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I29	PF08246	5 - 63	2.6e-17	Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1	PF00112	107 - 212	7e-28	Papain family cysteine protease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22160
fragaria_vesca	FvH4_1g23580 FvH4_1g25982 FvH4_2g17070 FvH4_3g40500 FvH4_6g27180 FvH4_6g27320 FvH4_6g33300 FvH4_6g33310 FvH4_7g09480 FvH4_7g13000 FvH4_7g13320 FvH4_7g13600
malus_domestica	MD00G1208000.v1.1 MD09G1238200.v1.1 MD09G1238600.v1.1 MD09G1238800.v1.1 MD09G1239100.v1.1 MD16G1226900.v1.1 MD16G1242700.v1.1 MD16G1244200.v1.1 MD16G1245500.v1.1 MD16G1245800.v1.1 MD17G1231600.v1.1 MD17G1231700.v1.1 MD17G1231800.v1.1 MD17G1232200.v1.1 MD17G1232300.v1.1 MD17G1232400.v1.1
prunus_persica	Prupe.1G072300_v2.0.a1 Prupe.1G072400_v2.0.a1 Prupe.3G106300_v2.0.a1 Prupe.3G106400_v2.0.a1 Prupe.3G119400_v2.0.a1 Prupe.3G120600_v2.0.a1 Prupe.3G121900_v2.0.a1 Prupe.3G122000_v2.0.a1 Prupe.3G122100_v2.0.a1 Prupe.3G122200_v2.0.a1 Prupe.3G122700_v2.0.a1 Prupe.5G055900_v2.0.a1 Prupe.5G056500_v2.0.a1
pyrus_communis	pycom09g15770 pycom09g15780 pycom09g15790 pycom16g20640 pycom17g18390
rosa_chinensis	RchiOBHm_Chr1g0352141 RchiOBHm_Chr1g0352581 RchiOBHm_Chr1g0352601 RchiOBHm_Chr1g0352621 RchiOBHm_Chr1g0352631 RchiOBHm_Chr2g0119131 RchiOBHm_Chr2g0128691 RchiOBHm_Chr2g0128701 RchiOBHm_Chr2g0129151 RchiOBHm_Chr2g0129221 RchiOBHm_Chr2g0129401 RchiOBHm_Chr2g0129421 RchiOBHm_Chr2g0129431 RchiOBHm_Chr2g0129471 RchiOBHm_Chr2g0129481 RchiOBHm_Chr2g0129491 RchiOBHm_Chr2g0143051 RchiOBHm_Chr2g0143121 RchiOBHm_Chr2g0143171 RchiOBHm_Chr3g0457341 RchiOBHm_Chr5g0049011 RchiOBHm_Chr6g0281281 RchiOBHm_Chr6g0281311
rosa_laevigata	RLG00000012975 RLG00000012976 RLG00000012979 RLG00000018447 RLG00000019018 RLG00000019061 RLG00000019066 RLG00000019078 RLG00000019079 RLG00000019080 RLG00000019083 RLG00000019085 RLG00000020009 RLG00000020010 RLG00000025234 RLG00000028326 RLG00000028327 RLG00000028328 RLG00000028329 RLG00000028357 RLG00000031784
rosa_multiflora	Rmu_co8169188.1_g000001 Rmu_co8261007.1_g000001 Rmu_co8314361.1_g000001 Rmu_sc0000109.1_g000014 Rmu_sc0000638.1_g000020 Rmu_sc0000847.1_g000020 Rmu_sc0000847.1_g000028 Rmu_sc0000847.1_g000037 Rmu_sc0000847.1_g000046 Rmu_sc0000911.1_g000034 Rmu_sc0000999.1_g000021 Rmu_sc0001171.1_g000013 Rmu_sc0001171.1_g000018 Rmu_sc0001171.1_g000019 Rmu_sc0001653.1_g000004 Rmu_sc0002277.1_g000005 Rmu_sc0003479.1_g000001 Rmu_sc0005118.1_g000006 Rmu_sc0005118.1_g000008 Rmu_sc0005227.1_g000012 Rmu_sc0005442.1_g000010 Rmu_sc0005514.1_g000005 Rmu_sc0005996.1_g000014 Rmu_sc0008800.1_g000002 Rmu_sc0008800.1_g000010 Rmu_sc0008800.1_g000014
rosa_roxburghii	Rroxscaffold_1G00065560 Rroxscaffold_2G00102080 Rroxscaffold_2G00102090 Rroxscaffold_2G00102110 Rroxscaffold_2G00114560 Rroxscaffold_2G00114570 Rroxscaffold_2G00114610 Rroxscaffold_2G00114620 Rroxscaffold_2G00114640 Rroxscaffold_2G00114740 Rroxscaffold_2G00114790 Rroxscaffold_2G00115860 Rroxscaffold_2G00124490 Rroxscaffold_4G00302260 Rroxscaffold_4G00302530 Rroxscaffold_4G00302550 Rroxscaffold_4G00302560 Rroxscaffold_4G00302620 Rroxscaffold_6G00421980 Rroxscaffold_7G00187140 Rroxscaffold_7G00187170
rosa_rugosa	Rorug01G0225000 Rorug01G0230200 Rorug02G0220500 Rorug02G0280000 Rorug02G0285200 Rorug02G0285400 Rorug02G0286300 Rorug02G0286300 Rorug02G0286400 Rorug02G0286900 Rorug02G0377800 Rorug02G0377900 Rorug02G0378000 Rorug02G0378000 Rorug02G0378800 Rorug03G0019800 Rorug04G0452700 Rorug06G0140300 Rorug06G0140500 Rorug06G0140600
rosa_samantha	Rh1CG223600 Rh1CG227200 Rh1CG227500 Rh1CG227600 Rh2BG341200 Rh2BG345300 Rh2BG440200 Rh2DG284500 Rh2DG357900 Rh2DG362100 Rh2DG362600 Rh2DG364500 Rh2DG364600 Rh2DG364700 Rh2DG364800 Rh2DG364900 Rh2DG365000 Rh2DG365400 Rh2DG450400 Rh3AG080000 Rh3BG081900 Rh5AG322100 Rh5BG079800 Rh6AG252100 Rh6BG255600
rosa_wichuraiana	Rw1G020770 Rw1G021290 Rw2G022120 Rw2G026940 Rw2G027360 Rw2G027370 Rw2G027950 Rw2G027960 Rw2G027970 Rw2G035220 Rw3G006890 Rw6G021900 Rw6G021930 Rw6G021950 Rw6G021970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	591
AccII	CGCG	1 cut(s)	620
AciI	CCGC	3 cut(s)	10, 618, 729
AclWI	GGATC	3 cut(s)	313, 609, 622
AcsI	RAATTY	1 cut(s)	161
AcuI	CTGAAG	2 cut(s)	26, 468
AfaI	GTAC	2 cut(s)	134, 143
AfeI	AGCGCT	1 cut(s)	74
AfiI	CCNNNNNNNGG	3 cut(s)	466, 467, 525
AgsI	TTSAA	2 cut(s)	88, 211
AjnI	CCWGG	1 cut(s)	465
AluBI	AGCT	6 cut(s)	29, 113, 242, 295, 315, 349
AluI	AGCT	6 cut(s)	29, 113, 242, 295, 315, 349
Alw26I	GTCTC	1 cut(s)	162
AlwI	GGATC	3 cut(s)	313, 609, 622
Aor51HI	AGCGCT	1 cut(s)	74
AoxI	GGCC	1 cut(s)	436
ApeKI	GCWGC	3 cut(s)	292, 512, 565
ApoI	RAATTY	1 cut(s)	161
AspLEI	GCGC	1 cut(s)	75
AspS9I	GGNCC	1 cut(s)	436
AsuHPI	GGTGA	1 cut(s)	79
BaeGI	GKGCMC	1 cut(s)	531
BamHI	GGATCC	1 cut(s)	614
BauI	CACGAG	2 cut(s)	14, 530
BbvI	GCAGC	3 cut(s)	304, 524, 552
BccI	CCATC	4 cut(s)	121, 527, 608, 633
BcgI	CGANNNNNNTGC	2 cut(s)	539, 573
BciT130I	CCWGG	1 cut(s)	467
BcoDI	GTCTC	1 cut(s)	162
BfaI	CTAG	1 cut(s)	335
BfmI	CTRYAG	2 cut(s)	296, 566
BfoI	RGCGCY	1 cut(s)	76
BfuAI	ACCTGC	1 cut(s)	591
BisI	GCNGC	4 cut(s)	11, 293, 513, 566
BlsI	GCNGC	4 cut(s)	12, 294, 514, 567
Bme1390I	CCNGG	1 cut(s)	467
BmgT120I	GGNCC	1 cut(s)	436
BmiI	GGNNCC	1 cut(s)	616
BmrFI	CCNGG	1 cut(s)	467
BmrI	ACTGGG	1 cut(s)	534
BmsI	GCATC	3 cut(s)	43, 595, 654
BmuI	ACTGGG	1 cut(s)	534
BpmI	CTGGAG	1 cut(s)	387
Bsa29I	ATCGAT	1 cut(s)	603
BsaI	GGTCTC	1 cut(s)	162
BsaJI	CCNNGG	2 cut(s)	466, 684
Bsc4I	CCNNNNNNNGG	3 cut(s)	466, 467, 525
Bse1I	ACTGG	2 cut(s)	370, 529
Bse3DI	GCAATG	1 cut(s)	201
BseBI	CCWGG	1 cut(s)	467
BseCI	ATCGAT	1 cut(s)	603
BseDI	CCNNGG	2 cut(s)	466, 684
BseGI	GGATG	6 cut(s)	58, 420, 503, 541, 669, 679
BseLI	CCNNNNNNNGG	3 cut(s)	466, 467, 525
BseMI	GCAATG	1 cut(s)	201
BseMII	CTCAG	2 cut(s)	140, 506
BseNI	ACTGG	2 cut(s)	370, 529
BseRI	GAGGAG	2 cut(s)	32, 197
BseSI	GKGCMC	1 cut(s)	531
BseXI	GCAGC	3 cut(s)	304, 524, 552
Bsh1236I	CGCG	1 cut(s)	620
Bsh1285I	CGRYCG	1 cut(s)	729
BshFI	GGCC	1 cut(s)	438
BshVI	ATCGAT	1 cut(s)	603
BsiEI	CGRYCG	1 cut(s)	729
BslI	CCNNNNNNNGG	3 cut(s)	466, 467, 525
BsmAI	GTCTC	1 cut(s)	162
BsmI	GAATGC	2 cut(s)	502, 562
BsnI	GGCC	1 cut(s)	438
Bso31I	GGTCTC	1 cut(s)	162
Bsp1286I	GDGCHC	1 cut(s)	531
Bsp143I	GATC	5 cut(s)	81, 90, 305, 376, 614
Bsp19I	CCATGG	1 cut(s)	684
BspACI	CCGC	3 cut(s)	10, 618, 729
BspANI	GGCC	1 cut(s)	438
BspCNI	CTCAG	2 cut(s)	141, 505
BspDI	ATCGAT	1 cut(s)	603
BspFNI	CGCG	1 cut(s)	620
BspLI	GGNNCC	1 cut(s)	616
BspMAI	CTGCAG	1 cut(s)	570
BspMI	ACCTGC	1 cut(s)	591
BspPI	GGATC	3 cut(s)	313, 609, 622
BspTNI	GGTCTC	1 cut(s)	162
BsrDI	GCAATG	1 cut(s)	201
BsrI	ACTGG	2 cut(s)	370, 529
BssECI	CCNNGG	2 cut(s)	466, 684
BssMI	GATC	5 cut(s)	81, 90, 305, 376, 614
BssSI	CACGAG	2 cut(s)	14, 530
BssT1I	CCWWGG	1 cut(s)	684
Bst2BI	CACGAG	2 cut(s)	14, 530
Bst2UI	CCWGG	1 cut(s)	467
Bst6I	CTCTTC	1 cut(s)	54
BstC8I	GCNNGC	1 cut(s)	570
BstDEI	CTNAG	2 cut(s)	149, 492
BstDSI	CCRYGG	1 cut(s)	684
BstF5I	GGATG	6 cut(s)	58, 420, 503, 541, 669, 679
BstFNI	CGCG	1 cut(s)	620
BstH2I	RGCGCY	1 cut(s)	76
BstHHI	GCGC	1 cut(s)	75
BstKTI	GATC	5 cut(s)	84, 93, 308, 379, 617
BstMAI	GTCTC	1 cut(s)	162
BstMBI	GATC	5 cut(s)	81, 90, 305, 376, 614
BstMCI	CGRYCG	1 cut(s)	729
BstMWI	GCNNNNNNNGC	7 cut(s)	10, 283, 292, 321, 435, 605, 713
BstNI	CCWGG	1 cut(s)	467
BstSCI	CCNGG	1 cut(s)	465
BstSFI	CTRYAG	2 cut(s)	296, 566
BstSLI	GKGCMC	1 cut(s)	531
BstUI	CGCG	1 cut(s)	620
BstV1I	GCAGC	3 cut(s)	304, 524, 552
BstX2I	RGATCY	1 cut(s)	614
BstYI	RGATCY	1 cut(s)	614
Bsu15I	ATCGAT	1 cut(s)	603
BsuRI	GGCC	1 cut(s)	438
BsuTUI	ATCGAT	1 cut(s)	603
BtgI	CCRYGG	1 cut(s)	684
BtsCI	GGATG	6 cut(s)	58, 420, 503, 541, 669, 679
BtsIMutI	CAGTG	3 cut(s)	146, 363, 522
BveI	ACCTGC	1 cut(s)	591
Cac8I	GCNNGC	1 cut(s)	570
CfoI	GCGC	1 cut(s)	75
Cfr13I	GGNCC	1 cut(s)	436
ClaI	ATCGAT	1 cut(s)	603
CseI	GACGC	1 cut(s)	722
Csp6I	GTAC	2 cut(s)	133, 142
CviAII	CATG	3 cut(s)	35, 685, 732
CviQI	GTAC	2 cut(s)	133, 142
DdeI	CTNAG	2 cut(s)	149, 492
DpnI	GATC	5 cut(s)	83, 92, 307, 378, 616
DpnII	GATC	5 cut(s)	81, 90, 305, 376, 614
DraI	TTTAAA	1 cut(s)	156
Eam1104I	CTCTTC	1 cut(s)	54
EarI	CTCTTC	1 cut(s)	54
Eco130I	CCWWGG	1 cut(s)	684
Eco31I	GGTCTC	1 cut(s)	162
Eco47III	AGCGCT	1 cut(s)	74
Eco57I	CTGAAG	2 cut(s)	26, 468
EcoO109I	RGGNCCY	1 cut(s)	436
EcoRII	CCWGG	1 cut(s)	465
EcoT14I	CCWWGG	1 cut(s)	684
ErhI	CCWWGG	1 cut(s)	684
FaeI	CATG	3 cut(s)	38, 688, 735
FaiI	YATR	7 cut(s)	36, 107, 258, 657, 686, 710, 733
FatI	CATG	3 cut(s)	34, 684, 731
Fnu4HI	GCNGC	4 cut(s)	11, 293, 513, 566
FokI	GGATG	6 cut(s)	65, 407, 490, 548, 676, 686
Fsp4HI	GCNGC	4 cut(s)	11, 293, 513, 566
FspBI	CTAG	1 cut(s)	335
GlaI	GCGC	1 cut(s)	74
GluI	GCNGC	4 cut(s)	11, 293, 513, 566
GsuI	CTGGAG	1 cut(s)	387
HaeII	RGCGCY	1 cut(s)	76
HaeIII	GGCC	1 cut(s)	438
HgaI	GACGC	1 cut(s)	722
HhaI	GCGC	1 cut(s)	75
Hin1II	CATG	3 cut(s)	38, 688, 735
Hin6I	GCGC	1 cut(s)	73
HinP1I	GCGC	1 cut(s)	73
HincII	GTYRAC	1 cut(s)	475
HindII	GTYRAC	1 cut(s)	475
HindIII	AAGCTT	1 cut(s)	111
HinfI	GANTC	1 cut(s)	693
HphI	GGTGA	1 cut(s)	79
Hpy166II	GTNNAC	3 cut(s)	46, 144, 475
Hpy188I	TCNGA	2 cut(s)	495, 726
Hpy188III	TCNNGA	3 cut(s)	88, 211, 636
Hpy8I	GTNNAC	3 cut(s)	46, 144, 475
Hpy99I	CGWCG	2 cut(s)	101, 554
HpyAV	CCTTC	4 cut(s)	58, 295, 421, 683
HpyCH4IV	ACGT	1 cut(s)	96
HpyCH4V	TGCA	6 cut(s)	56, 292, 486, 568, 608, 667
HpyF10VI	GCNNNNNNNGC	7 cut(s)	10, 283, 292, 321, 435, 605, 713
HpyF3I	CTNAG	2 cut(s)	149, 492
HpySE526I	ACGT	1 cut(s)	96
Hsp92II	CATG	3 cut(s)	38, 688, 735
HspAI	GCGC	1 cut(s)	73
Kzo9I	GATC	5 cut(s)	81, 90, 305, 376, 614
LpnPI	CCDG	9 cut(s)	248, 351, 452, 479, 510, 554, 596, 600, 693
Lsp1109I	GCAGC	3 cut(s)	304, 524, 552
LweI	GCATC	3 cut(s)	43, 595, 654
MaeI	CTAG	1 cut(s)	335
MaeII	ACGT	1 cut(s)	96
MaeIII	GTNAC	1 cut(s)	359
MalI	GATC	5 cut(s)	83, 92, 307, 378, 616
MboI	GATC	5 cut(s)	81, 90, 305, 376, 614
MboII	GAAGA	2 cut(s)	71, 76
MflI	RGATCY	1 cut(s)	614
MhlI	GDGCHC	1 cut(s)	531
MluCI	AATT	5 cut(s)	161, 327, 416, 454, 702
MlyI	GAGTC	1 cut(s)	687
MmeI	TCCRAC	1 cut(s)	252
MnlI	CCTC	7 cut(s)	10, 175, 207, 342, 362, 526, 526
MseI	TTAA	4 cut(s)	117, 155, 317, 326
MslI	CAYNNNNRTG	1 cut(s)	534
MspR9I	CCNGG	1 cut(s)	467
MssI	GTTTAAAC	1 cut(s)	156
Mva1269I	GAATGC	2 cut(s)	502, 562
MvaI	CCWGG	1 cut(s)	467
MvnI	CGCG	1 cut(s)	620
MwoI	GCNNNNNNNGC	7 cut(s)	10, 283, 292, 321, 435, 605, 713
NcoI	CCATGG	1 cut(s)	684
NdeII	GATC	5 cut(s)	81, 90, 305, 376, 614
NlaIII	CATG	3 cut(s)	38, 688, 735
NlaIV	GGNNCC	1 cut(s)	616
NmuCI	GTSAC	1 cut(s)	359
PcsI	WCGNNNNNNNCGW	2 cut(s)	37, 196
PctI	GAATGC	2 cut(s)	502, 562
PkrI	GCNGC	4 cut(s)	12, 294, 514, 567
PleI	GAGTC	1 cut(s)	687
PmeI	GTTTAAAC	1 cut(s)	156
PpsI	GAGTC	1 cut(s)	687
Psp6I	CCWGG	1 cut(s)	465
PspGI	CCWGG	1 cut(s)	465
PspN4I	GGNNCC	1 cut(s)	616
PspPI	GGNCC	1 cut(s)	436
PstI	CTGCAG	1 cut(s)	570
PsuI	RGATCY	1 cut(s)	614
RsaI	GTAC	2 cut(s)	134, 143
RsaNI	GTAC	2 cut(s)	133, 142
RseI	CAYNNNNRTG	1 cut(s)	534
SaqAI	TTAA	4 cut(s)	117, 155, 317, 326
SatI	GCNGC	4 cut(s)	11, 293, 513, 566
Sau3AI	GATC	5 cut(s)	81, 90, 305, 376, 614
Sau96I	GGNCC	1 cut(s)	436
SchI	GAGTC	1 cut(s)	687
ScrFI	CCNGG	1 cut(s)	467
SduI	GDGCHC	1 cut(s)	531
SfaNI	GCATC	3 cut(s)	43, 595, 654
SfcI	CTRYAG	2 cut(s)	296, 566
SmiMI	CAYNNNNRTG	1 cut(s)	534
Sse9I	AATT	5 cut(s)	161, 327, 416, 454, 702
SsiI	CCGC	3 cut(s)	10, 618, 729
SspMI	CTAG	1 cut(s)	335
StyD4I	CCNGG	1 cut(s)	465
StyI	CCWWGG	1 cut(s)	684
TaiI	ACGT	1 cut(s)	99
TaqI	TCGA	5 cut(s)	31, 99, 190, 603, 635
TasI	AATT	5 cut(s)	161, 327, 416, 454, 702
TatI	WGTACW	1 cut(s)	141
TauI	GCSGC	1 cut(s)	13
Tru1I	TTAA	4 cut(s)	117, 155, 317, 326
Tru9I	TTAA	4 cut(s)	117, 155, 317, 326
TscAI	CASTG	3 cut(s)	153, 370, 529
TseFI	GTSAC	1 cut(s)	359
TseI	GCWGC	3 cut(s)	292, 512, 565
Tsp45I	GTSAC	1 cut(s)	359
TspDTI	ATGAA	2 cut(s)	94, 409
TspRI	CASTG	3 cut(s)	153, 370, 529
XapI	RAATTY	1 cut(s)	161
XspI	CTAG	1 cut(s)	335

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.