Rorug02G0286300

Belongs to the peptidase C1 family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
31220549 .. 31226290
5742 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0286300.1

Sequence Viewer

Length: 1254 bp
ATGGCCTTCTCCGAGTTCGAGCCACTGAACGACAAGTCGCTCGTAGATTACATAAAGGCCACACCTTCCCTCTCTTCCAAGCTCAAGGATCACCTAGACAACTTGACCATCAAGGAAGTCGGCGATGGCAATCTCAATTTCGTCTTCATCGTTGTTGGTTCTCATGGCTCTTTCGTCATCAAGCAGGCTCTTCCTTACATACGTTGTATAGGTGAGTCATGGCCGATGACAAAGGAAAGAGCTTATTTTGAGGCTTTGGCATTGAGAGAGCATGGTCGTTTGAGTCCTGATCATGTGCCTGAAGTTTATCATTTTGATCGGACTATGTCTTTGATTGGCATGCGCTATTTGGAACCTCCACATATTATACTGCGAAAGGGATTGATTGCTGGAATTGAGTACCCTTTGCTGGCTGACCACATGTCAGATTATATGGCAAGGACTCTGTTCTACACTTCTCTCCTTTATCGTAATACTACCAACCACAGGAAAGCTGTTGCTGAATTTTGTGGAAATGTGGAGTTATGCAGGCTCACTGAGCAAGTTGTTTTCTCTGACCCTTACAAAGTATCTGAATATAACCGCTGGACTTCTCCTTATCTTGATTCTGATGCTGAGGCTGTGCGAGAGGACAATGCTTTGAAGCTTGAAGTTGCTGAGTTGAAATCTTTGTTCTGTGAGAGAGCCCAAGCCCTAATACATGGGGATCTTCACACTGGTTCTGTAATGGTGACTCCTGATTCAACTCAAGTTATAGATCCAGAATTTGCATTTTATGGACCAATAGGTTTTGATATTGGAGCTTTTCTGGGAAACTTGATTTTGTCTTTCTTTGCACAAGATGGGCATGCTGATGAACAAAATGATCGAAAAGCATACAAGGCTTGGATTTTGAGGATAATTCAAAATACATGGAACCTTTTTCACAGAAAATTTATCGCACTATGGGATGCAAACAAAGATGCTGGTGACGCGTATCTTCCTGCAATTTATAACAACTCTGAGCTTCAACAGCTTGTACAAGACAAATATATTAAAGAATTGCTTCATGACACCCTTGGATTTGGTGCTGCGAAAATGATAAGGAGAATTGTTGGTGTGGCACATGTCGAAGATTTTGAATCAATCACTGATGCTAGCAAGAGAGCAGGCTGTGAGCGACGGGCACTTGAGTTTGCAAAGCTGATTCTTAAGGAGAGGAGAAAATTTCAGAACATTGAGGAAGTTGTTTCAGCTGTTCAACAAATCCAGTGA

Protein Analysis

417

Amino Acids

47.61

Weight (kDa)

5.81

Isoelectric Point (pI)

36.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
APH PF01636 36 - 272 9.1e-13 Phosphotransferase enzyme family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000141)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22160
fragaria_vesca FvH4_1g23580 FvH4_1g25982 FvH4_2g17070 FvH4_3g40500 FvH4_6g27180 FvH4_6g27320 FvH4_6g33300 FvH4_6g33310 FvH4_7g09480 FvH4_7g13000 FvH4_7g13320 FvH4_7g13600
malus_domestica MD00G1208000.v1.1 MD09G1238200.v1.1 MD09G1238600.v1.1 MD09G1238800.v1.1 MD09G1239100.v1.1 MD16G1226900.v1.1 MD16G1242700.v1.1 MD16G1244200.v1.1 MD16G1245500.v1.1 MD16G1245800.v1.1 MD17G1231600.v1.1 MD17G1231700.v1.1 MD17G1231800.v1.1 MD17G1232200.v1.1 MD17G1232300.v1.1 MD17G1232400.v1.1
prunus_persica Prupe.1G072300_v2.0.a1 Prupe.1G072400_v2.0.a1 Prupe.3G106300_v2.0.a1 Prupe.3G106400_v2.0.a1 Prupe.3G119400_v2.0.a1 Prupe.3G120600_v2.0.a1 Prupe.3G121900_v2.0.a1 Prupe.3G122000_v2.0.a1 Prupe.3G122100_v2.0.a1 Prupe.3G122200_v2.0.a1 Prupe.3G122700_v2.0.a1 Prupe.5G055900_v2.0.a1 Prupe.5G056500_v2.0.a1
pyrus_communis pycom09g15770 pycom09g15780 pycom09g15790 pycom16g20640 pycom17g18390
rosa_chinensis RchiOBHm_Chr1g0352141 RchiOBHm_Chr1g0352581 RchiOBHm_Chr1g0352601 RchiOBHm_Chr1g0352621 RchiOBHm_Chr1g0352631 RchiOBHm_Chr2g0119131 RchiOBHm_Chr2g0128691 RchiOBHm_Chr2g0128701 RchiOBHm_Chr2g0129151 RchiOBHm_Chr2g0129221 RchiOBHm_Chr2g0129401 RchiOBHm_Chr2g0129421 RchiOBHm_Chr2g0129431 RchiOBHm_Chr2g0129471 RchiOBHm_Chr2g0129481 RchiOBHm_Chr2g0129491 RchiOBHm_Chr2g0143051 RchiOBHm_Chr2g0143121 RchiOBHm_Chr2g0143171 RchiOBHm_Chr3g0457341 RchiOBHm_Chr5g0049011 RchiOBHm_Chr6g0281281 RchiOBHm_Chr6g0281311
rosa_laevigata RLG00000012975 RLG00000012976 RLG00000012979 RLG00000018447 RLG00000019018 RLG00000019061 RLG00000019066 RLG00000019078 RLG00000019079 RLG00000019080 RLG00000019083 RLG00000019085 RLG00000020009 RLG00000020010 RLG00000025234 RLG00000028326 RLG00000028327 RLG00000028328 RLG00000028329 RLG00000028357 RLG00000031784
rosa_multiflora Rmu_co8169188.1_g000001 Rmu_co8261007.1_g000001 Rmu_co8314361.1_g000001 Rmu_sc0000109.1_g000014 Rmu_sc0000638.1_g000020 Rmu_sc0000847.1_g000020 Rmu_sc0000847.1_g000028 Rmu_sc0000847.1_g000037 Rmu_sc0000847.1_g000046 Rmu_sc0000911.1_g000034 Rmu_sc0000999.1_g000021 Rmu_sc0001171.1_g000013 Rmu_sc0001171.1_g000018 Rmu_sc0001171.1_g000019 Rmu_sc0001653.1_g000004 Rmu_sc0002277.1_g000005 Rmu_sc0003479.1_g000001 Rmu_sc0005118.1_g000006 Rmu_sc0005118.1_g000008 Rmu_sc0005227.1_g000012 Rmu_sc0005442.1_g000010 Rmu_sc0005514.1_g000005 Rmu_sc0005996.1_g000014 Rmu_sc0008800.1_g000002 Rmu_sc0008800.1_g000010 Rmu_sc0008800.1_g000014
rosa_roxburghii Rroxscaffold_1G00065560 Rroxscaffold_2G00102080 Rroxscaffold_2G00102090 Rroxscaffold_2G00102110 Rroxscaffold_2G00114560 Rroxscaffold_2G00114570 Rroxscaffold_2G00114610 Rroxscaffold_2G00114620 Rroxscaffold_2G00114640 Rroxscaffold_2G00114740 Rroxscaffold_2G00114790 Rroxscaffold_2G00115860 Rroxscaffold_2G00124490 Rroxscaffold_4G00302260 Rroxscaffold_4G00302530 Rroxscaffold_4G00302550 Rroxscaffold_4G00302560 Rroxscaffold_4G00302620 Rroxscaffold_6G00421980 Rroxscaffold_7G00187140 Rroxscaffold_7G00187170
rosa_rugosa Rorug01G0225000 Rorug01G0230200 Rorug02G0220500 Rorug02G0280000 Rorug02G0285200 Rorug02G0285400 Rorug02G0286300 Rorug02G0286300 Rorug02G0286400 Rorug02G0286900 Rorug02G0377800 Rorug02G0377900 Rorug02G0378000 Rorug02G0378000 Rorug02G0378800 Rorug03G0019800 Rorug04G0452700 Rorug06G0140300 Rorug06G0140500 Rorug06G0140600
rosa_samantha Rh1CG223600 Rh1CG227200 Rh1CG227500 Rh1CG227600 Rh2BG341200 Rh2BG345300 Rh2BG440200 Rh2DG284500 Rh2DG357900 Rh2DG362100 Rh2DG362600 Rh2DG364500 Rh2DG364600 Rh2DG364700 Rh2DG364800 Rh2DG364900 Rh2DG365000 Rh2DG365400 Rh2DG450400 Rh3AG080000 Rh3BG081900 Rh5AG322100 Rh5BG079800 Rh6AG252100 Rh6BG255600
rosa_wichuraiana Rw1G020770 Rw1G021290 Rw2G022120 Rw2G026940 Rw2G027360 Rw2G027370 Rw2G027950 Rw2G027960 Rw2G027970 Rw2G035220 Rw3G006890 Rw6G021900 Rw6G021930 Rw6G021950 Rw6G021970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 993
AccII CGCG 1 cut(s) 974
AciI CCGC 1 cut(s) 583
AclWI GGATC 3 cut(s) 96, 714, 752
AcoI YGGCCR 1 cut(s) 221
AcsI RAATTY 4 cut(s) 503, 764, 932, 1205
AcuI CTGAAG 1 cut(s) 321
AfaI GTAC 2 cut(s) 401, 1020
AfiI CCNNNNNNNGG 2 cut(s) 409, 486
AflII CTTAAG 1 cut(s) 1190
AflIII ACRYGT 3 cut(s) 420, 972, 1105
AgsI TTSAA 8 cut(s) 643, 650, 664, 744, 905, 1010, 1121, 1241
AhdI GACNNNNNGTC 1 cut(s) 421
AluBI AGCT 9 cut(s) 82, 242, 494, 646, 803, 1006, 1015, 1183, 1235
AluI AGCT 9 cut(s) 82, 242, 494, 646, 803, 1006, 1015, 1183, 1235
AlwI GGATC 3 cut(s) 96, 714, 752
AoxI GGCC 3 cut(s) 3, 57, 221
ApeKI GCWGC 1 cut(s) 1070
ApoI RAATTY 4 cut(s) 503, 764, 932, 1205
ArsI GACNNNNNNTTYG 2 cut(s) 313, 345
Asp700I GAANNNNTTC 1 cut(s) 1044
AspLEI GCGC 1 cut(s) 345
AspS9I GGNCC 1 cut(s) 779
AsuHPI GGTGA 4 cut(s) 83, 224, 742, 980
AsuNHI GCTAGC 1 cut(s) 1136
AvaII GGWCC 1 cut(s) 779
BaeGI GKGCMC 1 cut(s) 1168
BanII GRGCYC 1 cut(s) 688
BbsI GAAGAC 1 cut(s) 136
BbvCI CCTCAGC 1 cut(s) 615
BbvI GCAGC 1 cut(s) 1057
BccI CCATC 3 cut(s) 116, 119, 836
BclI TGATCA 1 cut(s) 289
BfaI CTAG 2 cut(s) 95, 1137
BfrI CTTAAG 1 cut(s) 1190
BisI GCNGC 1 cut(s) 1071
BlsI GCNGC 1 cut(s) 1072
Bme18I GGWCC 1 cut(s) 779
BmeRI GACNNNNNGTC 1 cut(s) 421
BmgT120I GGNCC 1 cut(s) 779
BmiI GGNNCC 2 cut(s) 354, 917
BmsI GCATC 4 cut(s) 601, 940, 952, 1123
BmtI GCTAGC 1 cut(s) 1140
BpiI GAAGAC 1 cut(s) 136
Bpu10I CCTNAGC 1 cut(s) 615
BpuEI CTTGAG 3 cut(s) 68, 732, 1190
BsaBI GATNNNNATC 1 cut(s) 129
BsaJI CCNNGG 1 cut(s) 1057
Bsc4I CCNNNNNNNGG 2 cut(s) 409, 486
Bse1I ACTGG 2 cut(s) 721, 1249
Bse8I GATNNNNATC 1 cut(s) 129
BseDI CCNNGG 1 cut(s) 1057
BseGI GGATG 1 cut(s) 955
BseJI GATNNNNATC 1 cut(s) 129
BseLI CCNNNNNNNGG 2 cut(s) 409, 486
BseMII CTCAG 4 cut(s) 528, 606, 648, 993
BseNI ACTGG 2 cut(s) 721, 1249
BseRI GAGGAG 1 cut(s) 1213
BseSI GKGCMC 1 cut(s) 1168
BseXI GCAGC 1 cut(s) 1057
Bsh1236I CGCG 1 cut(s) 974
BshFI GGCC 3 cut(s) 5, 59, 223
BslI CCNNNNNNNGG 2 cut(s) 409, 486
BsnI GGCC 3 cut(s) 5, 59, 223
Bsp1286I GDGCHC 2 cut(s) 688, 1168
Bsp1407I TGTACA 1 cut(s) 1018
Bsp143I GATC 6 cut(s) 88, 289, 316, 706, 757, 865
BspACI CCGC 1 cut(s) 583
BspANI GGCC 3 cut(s) 5, 59, 223
BspCNI CTCAG 4 cut(s) 529, 607, 649, 994
BspFNI CGCG 1 cut(s) 974
BspHI TCATGA 1 cut(s) 1048
BspLI GGNNCC 2 cut(s) 354, 917
BspOI GCTAGC 1 cut(s) 1140
BspPI GGATC 3 cut(s) 96, 714, 752
BspQI GCTCTTC 1 cut(s) 195
BspTI CTTAAG 1 cut(s) 1190
BsrGI TGTACA 1 cut(s) 1018
BsrI ACTGG 2 cut(s) 721, 1249
BssECI CCNNGG 1 cut(s) 1057
BssMI GATC 6 cut(s) 88, 289, 316, 706, 757, 865
BssT1I CCWWGG 1 cut(s) 1057
Bst6I CTCTTC 2 cut(s) 79, 195
BstAFI CTTAAG 1 cut(s) 1190
BstAUI TGTACA 1 cut(s) 1018
BstC8I GCNNGC 7 cut(s) 186, 341, 411, 530, 849, 1138, 1150
BstDEI CTNAG 4 cut(s) 537, 615, 657, 1002
BstF5I GGATG 1 cut(s) 955
BstFNI CGCG 1 cut(s) 974
BstHHI GCGC 1 cut(s) 345
BstKTI GATC 6 cut(s) 91, 292, 319, 709, 760, 868
BstMBI GATC 6 cut(s) 88, 289, 316, 706, 757, 865
BstMWI GCNNNNNNNGC 4 cut(s) 538, 881, 971, 1012
BstNSI RCATGY 4 cut(s) 343, 424, 851, 1109
BstSLI GKGCMC 1 cut(s) 1168
BstUI CGCG 1 cut(s) 974
BstV1I GCAGC 1 cut(s) 1057
BstV2I GAAGAC 1 cut(s) 136
BstX2I RGATCY 2 cut(s) 706, 757
BstYI RGATCY 2 cut(s) 706, 757
BsuRI GGCC 3 cut(s) 5, 59, 223
BtgZI GCGATG 1 cut(s) 138
BtsCI GGATG 1 cut(s) 955
BtsIMutI CAGTG 4 cut(s) 23, 534, 714, 1128
Cac8I GCNNGC 7 cut(s) 186, 341, 411, 530, 849, 1138, 1150
CciI TCATGA 1 cut(s) 1048
CfoI GCGC 1 cut(s) 345
Cfr13I GGNCC 1 cut(s) 779
CseI GACGC 1 cut(s) 980
Csp6I GTAC 2 cut(s) 400, 1019
CviQI GTAC 2 cut(s) 400, 1019
DdeI CTNAG 4 cut(s) 537, 615, 657, 1002
DpnI GATC 6 cut(s) 90, 291, 318, 708, 759, 867
DpnII GATC 6 cut(s) 88, 289, 316, 706, 757, 865
DriI GACNNNNNGTC 1 cut(s) 421
EaeI YGGCCR 1 cut(s) 221
Eam1104I CTCTTC 2 cut(s) 79, 195
Eam1105I GACNNNNNGTC 1 cut(s) 421
EarI CTCTTC 2 cut(s) 79, 195
Eco130I CCWWGG 1 cut(s) 1057
Eco24I GRGCYC 1 cut(s) 688
Eco47I GGWCC 1 cut(s) 779
Eco57I CTGAAG 1 cut(s) 321
EcoT14I CCWWGG 1 cut(s) 1057
EcoT38I GRGCYC 1 cut(s) 688
ErhI CCWWGG 1 cut(s) 1057
FalI AAGNNNNNCTT 2 cut(s) 1029, 1061
FbaI TGATCA 1 cut(s) 289
Fnu4HI GCNGC 1 cut(s) 1071
FokI GGATG 1 cut(s) 962
FriOI GRGCYC 1 cut(s) 688
Fsp4HI GCNGC 1 cut(s) 1071
FspBI CTAG 2 cut(s) 95, 1137
GlaI GCGC 1 cut(s) 344
GluI GCNGC 1 cut(s) 1071
HaeIII GGCC 3 cut(s) 5, 59, 223
HgaI GACGC 1 cut(s) 980
HhaI GCGC 1 cut(s) 345
Hin6I GCGC 1 cut(s) 343
HinP1I GCGC 1 cut(s) 343
HindIII AAGCTT 1 cut(s) 644
HinfI GANTC 8 cut(s) 215, 283, 442, 605, 733, 740, 1121, 1186
HphI GGTGA 4 cut(s) 83, 224, 742, 980
Hpy188I TCNGA 8 cut(s) 13, 321, 427, 556, 574, 610, 1003, 1212
Hpy188III TCNNGA 5 cut(s) 287, 602, 737, 761, 1049
Hpy99I CGWCG 1 cut(s) 1164
HpyAV CCTTC 2 cut(s) 16, 75
HpyCH4IV ACGT 1 cut(s) 202
HpyCH4V TGCA 6 cut(s) 528, 770, 836, 953, 986, 1178
HpyF10VI GCNNNNNNNGC 4 cut(s) 538, 881, 971, 1012
HpyF3I CTNAG 4 cut(s) 537, 615, 657, 1002
HpySE526I ACGT 1 cut(s) 202
HspAI GCGC 1 cut(s) 343
Ksp22I TGATCA 1 cut(s) 289
Kzo9I GATC 6 cut(s) 88, 289, 316, 706, 757, 865
LguI GCTCTTC 1 cut(s) 195
LmnI GCTCC 1 cut(s) 800
Lsp1109I GCAGC 1 cut(s) 1057
LweI GCATC 4 cut(s) 601, 940, 952, 1123
MaeI CTAG 2 cut(s) 95, 1137
MaeII ACGT 1 cut(s) 202
MaeIII GTNAC 2 cut(s) 730, 968
MalI GATC 6 cut(s) 90, 291, 318, 708, 759, 867
MboI GATC 6 cut(s) 88, 289, 316, 706, 757, 865
MboII GAAGA 6 cut(s) 66, 136, 182, 701, 971, 1124
MflI RGATCY 2 cut(s) 706, 757
MhlI GDGCHC 2 cut(s) 688, 1168
MluI ACGCGT 1 cut(s) 972
MlyI GAGTC 4 cut(s) 224, 292, 436, 727
MnlI CCTC 8 cut(s) 80, 244, 366, 610, 622, 888, 1191, 1213
MroXI GAANNNNTTC 1 cut(s) 1044
MseI TTAA 2 cut(s) 1035, 1191
MslI CAYNNNNRTG 1 cut(s) 852
MspA1I CMGCKG 2 cut(s) 585, 1235
MspCI CTTAAG 1 cut(s) 1190
MvnI CGCG 1 cut(s) 974
MwoI GCNNNNNNNGC 4 cut(s) 538, 881, 971, 1012
NdeII GATC 6 cut(s) 88, 289, 316, 706, 757, 865
NheI GCTAGC 1 cut(s) 1136
NlaIV GGNNCC 2 cut(s) 354, 917
NmuCI GTSAC 2 cut(s) 730, 968
NspI RCATGY 4 cut(s) 343, 424, 851, 1109
PaeI GCATGC 2 cut(s) 343, 851
PagI TCATGA 1 cut(s) 1048
PciI ACATGT 2 cut(s) 420, 1105
PciSI GCTCTTC 1 cut(s) 195
PcsI WCGNNNNNNNCGW 1 cut(s) 147
PdmI GAANNNNTTC 1 cut(s) 1044
PfeI GAWTC 4 cut(s) 605, 740, 1121, 1186
PflFI GACNNNGTC 1 cut(s) 325
PkrI GCNGC 1 cut(s) 1072
PleI GAGTC 4 cut(s) 223, 291, 436, 727
PpsI GAGTC 4 cut(s) 223, 291, 436, 727
PscI ACATGT 2 cut(s) 420, 1105
PsiI TTATAA 1 cut(s) 993
PspN4I GGNNCC 2 cut(s) 354, 917
PspPI GGNCC 1 cut(s) 779
PsuI RGATCY 2 cut(s) 706, 757
PsyI GACNNNGTC 1 cut(s) 325
PvuII CAGCTG 1 cut(s) 1235
RsaI GTAC 2 cut(s) 401, 1020
RsaNI GTAC 2 cut(s) 400, 1019
RseI CAYNNNNRTG 1 cut(s) 852
SapI GCTCTTC 1 cut(s) 195
SaqAI TTAA 2 cut(s) 1035, 1191
SatI GCNGC 1 cut(s) 1071
Sau3AI GATC 6 cut(s) 88, 289, 316, 706, 757, 865
Sau96I GGNCC 1 cut(s) 779
SchI GAGTC 4 cut(s) 224, 292, 436, 727
SduI GDGCHC 2 cut(s) 688, 1168
SfaNI GCATC 4 cut(s) 601, 940, 952, 1123
SinI GGWCC 1 cut(s) 779
SmiMI CAYNNNNRTG 1 cut(s) 852
SmlI CTYRAG 4 cut(s) 83, 747, 1169, 1190
SmoI CTYRAG 4 cut(s) 83, 747, 1169, 1190
SphI GCATGC 2 cut(s) 343, 851
SsiI CCGC 1 cut(s) 583
SspMI CTAG 2 cut(s) 95, 1137
StyI CCWWGG 1 cut(s) 1057
TaiI ACGT 1 cut(s) 205
TaqI TCGA 3 cut(s) 18, 868, 1110
TatI WGTACW 1 cut(s) 1018
TfiI GAWTC 4 cut(s) 605, 740, 1121, 1186
Tru1I TTAA 2 cut(s) 1035, 1191
Tru9I TTAA 2 cut(s) 1035, 1191
TscAI CASTG 4 cut(s) 30, 541, 721, 1135
TseFI GTSAC 2 cut(s) 730, 968
TseI GCWGC 1 cut(s) 1070
Tsp45I GTSAC 2 cut(s) 730, 968
TspDTI ATGAA 3 cut(s) 136, 870, 1037
TspRI CASTG 4 cut(s) 30, 541, 721, 1135
Tth111I GACNNNGTC 1 cut(s) 325
Vha464I CTTAAG 1 cut(s) 1190
VpaK11BI GGWCC 1 cut(s) 779
XapI RAATTY 4 cut(s) 503, 764, 932, 1205
XceI RCATGY 4 cut(s) 343, 424, 851, 1109
XmnI GAANNNNTTC 1 cut(s) 1044
XspI CTAG 2 cut(s) 95, 1137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.