Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000141

Physical Location & Seq

Genomic Coordinates Reverse (-)

59983742 .. 59984901

Gene Structure 1160 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000020009

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1041 bp

ATGGGGTTCACCAACCTCGGAAAATACCTATGTTTGGCTTTGATCCTCGTAATGTTTGGAGCTTGGTCTTCTGAAGCCACTTCTCGCACTCTCCAAGATGCATCAATGTATGGGAGATACGAGCAGTGGATGGCTCATTATGGACGTGTCCACAACGAGATTAACGAAAAGGAGAAGCGCTTCCAGATATTCAAGGAAAATGTAGCATTTGTAGAATCATCCAACAATGATGCAAGCAAACCTTACAAATTAAGTGTCAATCAATTTGCAGACCTTACAAATGAAGAATTCATTGCCTCGAGAAATCGATTCAAGGGGCATGGATGTTCCACAAAGACCACATCTTTCAAGTATGAAAACGTTACTGTGCCAGCTACTGTGGACTGGAGACAGAAAGGAGCTGTAACCCCAATCAAGGACCAAGGCCAATGTGGATCCTGTTGGGCTTTCTCAGCTGTGGCAGCCATGGAAGGAATCACTCAACTTACTACAGGTAAACTAATCTCTTTGTCCGAGCAAGAGCTGGTTGACTGTGATGTGAATGGTGGAGACCAAGGTTGTGACGGTGGCTTGATGGACAATGCCTTTGAGTTCATCGATCAAAATCATGGACTTAGTACTGAGGCTAATTACCCCTACACCGGTGTTGATGGTACATGCAATGCCCAGAAGGAAGCAAGCCATGCGGCCTCTATAACTGGTCACGAAGATGTTCCTGCAAATAGTGAAAGTGCCCTTCTTAAGGCCGTCGCTAATCAACCCATTTCTGTTGCCATTGATGCTAGTAGTTCGGATTTCCAATTCTATTCAAGTGGTGTTTTCATAGGAACTTGCGGAACAAGCGGCCTGCCATTGATGCTAAACCATGGTGTTACTGCAGTAGGTTATGGCGTCAGCGATGATGGGACTAAGTATTGGTTGGTTAAGAACTCATGGGGGGCACAATGGGGTGAAGAAGGGTACATAAGAATGCAAAGAGATGTTGCTGAGAAGGAAGGTCTGTGTGGTATTGCTATGGCAGCGTCTTATCCCACTGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000323 GO:0000325 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009505 GO:0009555 GO:0009605 GO:0009607 GO:0009620 GO:0009626 GO:0009791 GO:0009908 GO:0009987 GO:0010623 GO:0012501 GO:0012505 GO:0016787 GO:0019538 GO:0022414 GO:0030154 GO:0030163 GO:0030312 GO:0032501 GO:0032502 GO:0033554 GO:0034050 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048468 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050832 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0070011 GO:0071704 GO:0071944 GO:0090567 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I29 Peptidase_C1

Protein Analysis

347

Amino Acids

37.55

Weight (kDa)

4.93

Isoelectric Point (pI)

22.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I29	PF08246	40 - 97	1.5e-18	Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1	PF00112	123 - 345	1.1e-83	Papain family cysteine protease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22160
fragaria_vesca	FvH4_1g23580 FvH4_1g25982 FvH4_2g17070 FvH4_3g40500 FvH4_6g27180 FvH4_6g27320 FvH4_6g33300 FvH4_6g33310 FvH4_7g09480 FvH4_7g13000 FvH4_7g13320 FvH4_7g13600
malus_domestica	MD00G1208000.v1.1 MD09G1238200.v1.1 MD09G1238600.v1.1 MD09G1238800.v1.1 MD09G1239100.v1.1 MD16G1226900.v1.1 MD16G1242700.v1.1 MD16G1244200.v1.1 MD16G1245500.v1.1 MD16G1245800.v1.1 MD17G1231600.v1.1 MD17G1231700.v1.1 MD17G1231800.v1.1 MD17G1232200.v1.1 MD17G1232300.v1.1 MD17G1232400.v1.1
prunus_persica	Prupe.1G072300_v2.0.a1 Prupe.1G072400_v2.0.a1 Prupe.3G106300_v2.0.a1 Prupe.3G106400_v2.0.a1 Prupe.3G119400_v2.0.a1 Prupe.3G120600_v2.0.a1 Prupe.3G121900_v2.0.a1 Prupe.3G122000_v2.0.a1 Prupe.3G122100_v2.0.a1 Prupe.3G122200_v2.0.a1 Prupe.3G122700_v2.0.a1 Prupe.5G055900_v2.0.a1 Prupe.5G056500_v2.0.a1
pyrus_communis	pycom09g15770 pycom09g15780 pycom09g15790 pycom16g20640 pycom17g18390
rosa_chinensis	RchiOBHm_Chr1g0352141 RchiOBHm_Chr1g0352581 RchiOBHm_Chr1g0352601 RchiOBHm_Chr1g0352621 RchiOBHm_Chr1g0352631 RchiOBHm_Chr2g0119131 RchiOBHm_Chr2g0128691 RchiOBHm_Chr2g0128701 RchiOBHm_Chr2g0129151 RchiOBHm_Chr2g0129221 RchiOBHm_Chr2g0129401 RchiOBHm_Chr2g0129421 RchiOBHm_Chr2g0129431 RchiOBHm_Chr2g0129471 RchiOBHm_Chr2g0129481 RchiOBHm_Chr2g0129491 RchiOBHm_Chr2g0143051 RchiOBHm_Chr2g0143121 RchiOBHm_Chr2g0143171 RchiOBHm_Chr3g0457341 RchiOBHm_Chr5g0049011 RchiOBHm_Chr6g0281281 RchiOBHm_Chr6g0281311
rosa_laevigata	RLG00000012975 RLG00000012976 RLG00000012979 RLG00000018447 RLG00000019018 RLG00000019061 RLG00000019066 RLG00000019078 RLG00000019079 RLG00000019080 RLG00000019083 RLG00000019085 RLG00000020009 RLG00000020010 RLG00000025234 RLG00000028326 RLG00000028327 RLG00000028328 RLG00000028329 RLG00000028357 RLG00000031784
rosa_multiflora	Rmu_co8169188.1_g000001 Rmu_co8261007.1_g000001 Rmu_co8314361.1_g000001 Rmu_sc0000109.1_g000014 Rmu_sc0000638.1_g000020 Rmu_sc0000847.1_g000020 Rmu_sc0000847.1_g000028 Rmu_sc0000847.1_g000037 Rmu_sc0000847.1_g000046 Rmu_sc0000911.1_g000034 Rmu_sc0000999.1_g000021 Rmu_sc0001171.1_g000013 Rmu_sc0001171.1_g000018 Rmu_sc0001171.1_g000019 Rmu_sc0001653.1_g000004 Rmu_sc0002277.1_g000005 Rmu_sc0003479.1_g000001 Rmu_sc0005118.1_g000006 Rmu_sc0005118.1_g000008 Rmu_sc0005227.1_g000012 Rmu_sc0005442.1_g000010 Rmu_sc0005514.1_g000005 Rmu_sc0005996.1_g000014 Rmu_sc0008800.1_g000002 Rmu_sc0008800.1_g000010 Rmu_sc0008800.1_g000014
rosa_roxburghii	Rroxscaffold_1G00065560 Rroxscaffold_2G00102080 Rroxscaffold_2G00102090 Rroxscaffold_2G00102110 Rroxscaffold_2G00114560 Rroxscaffold_2G00114570 Rroxscaffold_2G00114610 Rroxscaffold_2G00114620 Rroxscaffold_2G00114640 Rroxscaffold_2G00114740 Rroxscaffold_2G00114790 Rroxscaffold_2G00115860 Rroxscaffold_2G00124490 Rroxscaffold_4G00302260 Rroxscaffold_4G00302530 Rroxscaffold_4G00302550 Rroxscaffold_4G00302560 Rroxscaffold_4G00302620 Rroxscaffold_6G00421980 Rroxscaffold_7G00187140 Rroxscaffold_7G00187170
rosa_rugosa	Rorug01G0225000 Rorug01G0230200 Rorug02G0220500 Rorug02G0280000 Rorug02G0285200 Rorug02G0285400 Rorug02G0286300 Rorug02G0286300 Rorug02G0286400 Rorug02G0286900 Rorug02G0377800 Rorug02G0377900 Rorug02G0378000 Rorug02G0378000 Rorug02G0378800 Rorug03G0019800 Rorug04G0452700 Rorug06G0140300 Rorug06G0140500 Rorug06G0140600
rosa_samantha	Rh1CG223600 Rh1CG227200 Rh1CG227500 Rh1CG227600 Rh2BG341200 Rh2BG345300 Rh2BG440200 Rh2DG284500 Rh2DG357900 Rh2DG362100 Rh2DG362600 Rh2DG364500 Rh2DG364600 Rh2DG364700 Rh2DG364800 Rh2DG364900 Rh2DG365000 Rh2DG365400 Rh2DG450400 Rh3AG080000 Rh3BG081900 Rh5AG322100 Rh5BG079800 Rh6AG252100 Rh6BG255600
rosa_wichuraiana	Rw1G020770 Rw1G021290 Rw2G022120 Rw2G026940 Rw2G027360 Rw2G027370 Rw2G027950 Rw2G027960 Rw2G027970 Rw2G035220 Rw3G006890 Rw6G021900 Rw6G021930 Rw6G021950 Rw6G021970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	3 cut(s)	686, 834, 843
AclI	AACGTT	1 cut(s)	360
AclWI	GGATC	3 cut(s)	37, 429, 442
AcsI	RAATTY	1 cut(s)	287
AcuI	CTGAAG	1 cut(s)	93
AcyI	GRCGYC	1 cut(s)	891
AfaI	GTAC	3 cut(s)	619, 655, 962
AfeI	AGCGCT	1 cut(s)	179
AfiI	CCNNNNNNNGG	4 cut(s)	34, 415, 641, 742
AflII	CTTAAG	1 cut(s)	740
AflIII	ACRYGT	1 cut(s)	145
AgeI	ACCGGT	1 cut(s)	641
AgsI	TTSAA	4 cut(s)	193, 313, 349, 810
AjiI	CACGTC	1 cut(s)	146
AluBI	AGCT	5 cut(s)	62, 374, 401, 455, 523
AluI	AGCT	5 cut(s)	62, 374, 401, 455, 523
Alw26I	GTCTC	2 cut(s)	382, 543
AlwI	GGATC	3 cut(s)	37, 429, 442
AlwNI	CAGNNNCTG	1 cut(s)	377
Ama87I	CYCGRG	1 cut(s)	298
Aor51HI	AGCGCT	1 cut(s)	179
AoxI	GGCC	4 cut(s)	424, 687, 744, 844
ApeKI	GCWGC	2 cut(s)	461, 1019
ApoI	RAATTY	1 cut(s)	287
ArsI	GACNNNNNNTTYG	4 cut(s)	240, 272, 569, 601
AsiGI	ACCGGT	1 cut(s)	641
Asp700I	GAANNNNTTC	2 cut(s)	179, 711
AspLEI	GCGC	1 cut(s)	180
AspS9I	GGNCC	1 cut(s)	418
AsuHPI	GGTGA	1 cut(s)	962
AvaI	CYCGRG	1 cut(s)	298
AvaII	GGWCC	1 cut(s)	418
BaeGI	GKGCMC	2 cut(s)	736, 943
BamHI	GGATCC	1 cut(s)	434
BbsI	GAAGAC	1 cut(s)	60
BbvI	GCAGC	2 cut(s)	473, 1031
BccI	CCATC	4 cut(s)	124, 568, 644, 896
BceAI	ACGGC	1 cut(s)	731
BcoDI	GTCTC	2 cut(s)	382, 543
BfaI	CTAG	1 cut(s)	783
BfmI	CTRYAG	2 cut(s)	489, 876
BfoI	RGCGCY	1 cut(s)	181
BfrI	CTTAAG	1 cut(s)	740
BisI	GCNGC	4 cut(s)	462, 687, 844, 1020
BlsI	GCNGC	4 cut(s)	463, 688, 845, 1021
BmcAI	AGTACT	1 cut(s)	619
Bme18I	GGWCC	1 cut(s)	418
BmeT110I	CYCGRG	1 cut(s)	298
BmgBI	CACGTC	1 cut(s)	146
BmgT120I	GGNCC	1 cut(s)	418
BmiI	GGNNCC	1 cut(s)	436
BmsI	GCATC	5 cut(s)	88, 110, 220, 769, 846
BpiI	GAAGAC	1 cut(s)	60
BpmI	CTGGAG	1 cut(s)	406
Bsa29I	ATCGAT	2 cut(s)	307, 597
BsaBI	GATNNNNATC	1 cut(s)	603
BsaHI	GRCGYC	1 cut(s)	891
BsaI	GGTCTC	1 cut(s)	543
BsaJI	CCNNGG	5 cut(s)	16, 421, 465, 553, 865
BsaWI	WCCGGW	1 cut(s)	641
Bsc4I	CCNNNNNNNGG	4 cut(s)	34, 415, 641, 742
Bse118I	RCCGGY	1 cut(s)	641
Bse1I	ACTGG	2 cut(s)	389, 703
Bse3DI	GCAATG	2 cut(s)	291, 667
Bse8I	GATNNNNATC	1 cut(s)	603
BseCI	ATCGAT	2 cut(s)	307, 597
BseDI	CCNNGG	5 cut(s)	16, 421, 465, 553, 865
BseGI	GGATG	3 cut(s)	135, 218, 329
BseJI	GATNNNNATC	1 cut(s)	603
BseLI	CCNNNNNNNGG	4 cut(s)	34, 415, 641, 742
BseMI	GCAATG	2 cut(s)	291, 667
BseMII	CTCAG	3 cut(s)	465, 612, 978
BseNI	ACTGG	2 cut(s)	389, 703
BseSI	GKGCMC	2 cut(s)	736, 943
BseXI	GCAGC	2 cut(s)	473, 1031
BshFI	GGCC	4 cut(s)	426, 689, 746, 846
BshTI	ACCGGT	1 cut(s)	641
BshVI	ATCGAT	2 cut(s)	307, 597
BsiHKCI	CYCGRG	1 cut(s)	298
BsiSI	CCGG	1 cut(s)	642
BslFI	GGGAC	1 cut(s)	919
BslI	CCNNNNNNNGG	4 cut(s)	34, 415, 641, 742
BsmAI	GTCTC	2 cut(s)	382, 543
BsmFI	GGGAC	1 cut(s)	919
BsmI	GAATGC	1 cut(s)	975
BsnI	GGCC	4 cut(s)	426, 689, 746, 846
Bso31I	GGTCTC	1 cut(s)	543
BsoBI	CYCGRG	1 cut(s)	298
Bsp1286I	GDGCHC	2 cut(s)	736, 943
Bsp143I	GATC	3 cut(s)	42, 434, 598
Bsp19I	CCATGG	2 cut(s)	465, 865
BspACI	CCGC	3 cut(s)	686, 834, 843
BspANI	GGCC	4 cut(s)	426, 689, 746, 846
BspCNI	CTCAG	3 cut(s)	464, 613, 979
BspDI	ATCGAT	2 cut(s)	307, 597
BspLI	GGNNCC	1 cut(s)	436
BspMAI	CTGCAG	1 cut(s)	880
BspPI	GGATC	3 cut(s)	37, 429, 442
BspTI	CTTAAG	1 cut(s)	740
BspTNI	GGTCTC	1 cut(s)	543
BsrDI	GCAATG	2 cut(s)	291, 667
BsrFI	RCCGGY	1 cut(s)	641
BsrI	ACTGG	2 cut(s)	389, 703
BssAI	RCCGGY	1 cut(s)	641
BssECI	CCNNGG	5 cut(s)	16, 421, 465, 553, 865
BssMI	GATC	3 cut(s)	42, 434, 598
BssNI	GRCGYC	1 cut(s)	891
BssT1I	CCWWGG	4 cut(s)	421, 465, 553, 865
Bst4CI	ACNGT	4 cut(s)	367, 379, 533, 566
BstACI	GRCGYC	1 cut(s)	891
BstAFI	CTTAAG	1 cut(s)	740
BstAPI	GCANNNNNTGC	1 cut(s)	683
BstC8I	GCNNGC	4 cut(s)	235, 372, 679, 848
BstDEI	CTNAG	5 cut(s)	451, 614, 621, 909, 987
BstDSI	CCRYGG	2 cut(s)	465, 865
BstENI	CCTNNNNNAGG	1 cut(s)	740
BstF5I	GGATG	3 cut(s)	135, 218, 329
BstH2I	RGCGCY	1 cut(s)	181
BstHHI	GCGC	1 cut(s)	180
BstKTI	GATC	3 cut(s)	45, 437, 601
BstMAI	GTCTC	2 cut(s)	382, 543
BstMBI	GATC	3 cut(s)	42, 434, 598
BstMWI	GCNNNNNNNGC	7 cut(s)	452, 461, 683, 779, 840, 856, 1019
BstNSI	RCATGY	1 cut(s)	660
BstSFI	CTRYAG	2 cut(s)	489, 876
BstSLI	GKGCMC	2 cut(s)	736, 943
BstV1I	GCAGC	2 cut(s)	473, 1031
BstV2I	GAAGAC	1 cut(s)	60
BstX2I	RGATCY	1 cut(s)	434
BstYI	RGATCY	1 cut(s)	434
Bsu15I	ATCGAT	2 cut(s)	307, 597
BsuRI	GGCC	4 cut(s)	426, 689, 746, 846
BsuTUI	ATCGAT	2 cut(s)	307, 597
BtgI	CCRYGG	2 cut(s)	465, 865
BtgZI	GCGATG	1 cut(s)	912
BtrI	CACGTC	1 cut(s)	146
BtsCI	GGATG	3 cut(s)	135, 218, 329
BtsI	GCAGTG	2 cut(s)	131, 1032
BtsIMutI	CAGTG	2 cut(s)	131, 1032
Cac8I	GCNNGC	4 cut(s)	235, 372, 679, 848
CaiI	CAGNNNCTG	1 cut(s)	377
CfoI	GCGC	1 cut(s)	180
Cfr10I	RCCGGY	1 cut(s)	641
Cfr13I	GGNCC	1 cut(s)	418
ClaI	ATCGAT	2 cut(s)	307, 597
CseI	GACGC	2 cut(s)	880, 1011
Csp6I	GTAC	3 cut(s)	618, 654, 961
CspAI	ACCGGT	1 cut(s)	641
CviAII	CATG	7 cut(s)	320, 466, 608, 657, 683, 866, 933
CviQI	GTAC	3 cut(s)	618, 654, 961
DdeI	CTNAG	5 cut(s)	451, 614, 621, 909, 987
DpnI	GATC	3 cut(s)	44, 436, 600
DpnII	GATC	3 cut(s)	42, 434, 598
Eco130I	CCWWGG	4 cut(s)	421, 465, 553, 865
Eco31I	GGTCTC	1 cut(s)	543
Eco47I	GGWCC	1 cut(s)	418
Eco47III	AGCGCT	1 cut(s)	179
Eco57I	CTGAAG	1 cut(s)	93
Eco88I	CYCGRG	1 cut(s)	298
EcoNI	CCTNNNNNAGG	1 cut(s)	740
EcoRI	GAATTC	1 cut(s)	287
EcoT14I	CCWWGG	4 cut(s)	421, 465, 553, 865
EcoT22I	ATGCAT	1 cut(s)	103
ErhI	CCWWGG	4 cut(s)	421, 465, 553, 865
FaeI	CATG	7 cut(s)	323, 469, 611, 660, 686, 869, 936
FalI	AAGNNNNNCTT	2 cut(s)	226, 258
FaqI	GGGAC	1 cut(s)	919
FatI	CATG	7 cut(s)	319, 465, 607, 656, 682, 865, 932
Fnu4HI	GCNGC	4 cut(s)	462, 687, 844, 1020
FokI	GGATG	3 cut(s)	142, 205, 336
Fsp4HI	GCNGC	4 cut(s)	462, 687, 844, 1020
FspBI	CTAG	1 cut(s)	783
GlaI	GCGC	1 cut(s)	179
GluI	GCNGC	4 cut(s)	462, 687, 844, 1020
GsuI	CTGGAG	1 cut(s)	406
HaeII	RGCGCY	1 cut(s)	181
HaeIII	GGCC	4 cut(s)	426, 689, 746, 846
HapII	CCGG	1 cut(s)	642
HgaI	GACGC	2 cut(s)	880, 1011
HhaI	GCGC	1 cut(s)	180
Hin1I	GRCGYC	1 cut(s)	891
Hin1II	CATG	7 cut(s)	323, 469, 611, 660, 686, 869, 936
Hin6I	GCGC	1 cut(s)	178
HinP1I	GCGC	1 cut(s)	178
HincII	GTYRAC	1 cut(s)	529
HindII	GTYRAC	1 cut(s)	529
HinfI	GANTC	3 cut(s)	215, 309, 474
HpaII	CCGG	1 cut(s)	642
HphI	GGTGA	1 cut(s)	962
Hpy166II	GTNNAC	5 cut(s)	9, 151, 382, 497, 529
Hpy188I	TCNGA	4 cut(s)	20, 73, 514, 793
Hpy188III	TCNNGA	3 cut(s)	184, 300, 704
Hpy8I	GTNNAC	5 cut(s)	9, 151, 382, 497, 529
Hpy99I	CGWCG	1 cut(s)	752
HpyAV	CCTTC	6 cut(s)	464, 664, 746, 950, 985, 989
HpyCH4III	ACNGT	4 cut(s)	367, 379, 533, 566
HpyCH4IV	ACGT	2 cut(s)	145, 360
HpyCH4V	TGCA	8 cut(s)	101, 233, 269, 660, 719, 878, 973, 1037
HpyF10VI	GCNNNNNNNGC	7 cut(s)	452, 461, 683, 779, 840, 856, 1019
HpyF3I	CTNAG	5 cut(s)	451, 614, 621, 909, 987
HpySE526I	ACGT	2 cut(s)	145, 360
Hsp92I	GRCGYC	1 cut(s)	891
Hsp92II	CATG	7 cut(s)	323, 469, 611, 660, 686, 869, 936
HspAI	GCGC	1 cut(s)	178
Kzo9I	GATC	3 cut(s)	42, 434, 598
LmnI	GCTCC	2 cut(s)	59, 398
Lsp1109I	GCAGC	2 cut(s)	473, 1031
LweI	GCATC	5 cut(s)	88, 110, 220, 769, 846
MaeI	CTAG	1 cut(s)	783
MaeII	ACGT	2 cut(s)	145, 360
MaeIII	GTNAC	5 cut(s)	361, 403, 560, 701, 871
MalI	GATC	3 cut(s)	44, 436, 600
MboI	GATC	3 cut(s)	42, 434, 598
MboII	GAAGA	4 cut(s)	60, 296, 719, 965
MflI	RGATCY	1 cut(s)	434
MhlI	GDGCHC	2 cut(s)	736, 943
MluCI	AATT	5 cut(s)	248, 263, 287, 628, 800
MmeI	TCCRAC	1 cut(s)	246
MnlI	CCTC	5 cut(s)	26, 56, 307, 616, 700
Mph1103I	ATGCAT	1 cut(s)	103
MroXI	GAANNNNTTC	2 cut(s)	179, 711
MseI	TTAA	4 cut(s)	162, 251, 741, 924
MslI	CAYNNNNRTG	2 cut(s)	708, 968
MspA1I	CMGCKG	1 cut(s)	455
MspCI	CTTAAG	1 cut(s)	740
MspI	CCGG	1 cut(s)	642
Mva1269I	GAATGC	1 cut(s)	975
MwoI	GCNNNNNNNGC	7 cut(s)	452, 461, 683, 779, 840, 856, 1019
NcoI	CCATGG	2 cut(s)	465, 865
NdeII	GATC	3 cut(s)	42, 434, 598
NlaIII	CATG	7 cut(s)	323, 469, 611, 660, 686, 869, 936
NlaIV	GGNNCC	1 cut(s)	436
NmuCI	GTSAC	2 cut(s)	560, 701
NsiI	ATGCAT	1 cut(s)	103
NspI	RCATGY	1 cut(s)	660
PaeR7I	CTCGAG	1 cut(s)	298
PcsI	WCGNNNNNNNCGW	1 cut(s)	162
PctI	GAATGC	1 cut(s)	975
PdmI	GAANNNNTTC	2 cut(s)	179, 711
PfeI	GAWTC	3 cut(s)	215, 309, 474
PinAI	ACCGGT	1 cut(s)	641
PkrI	GCNGC	4 cut(s)	463, 688, 845, 1021
Psp1406I	AACGTT	1 cut(s)	360
PspN4I	GGNNCC	1 cut(s)	436
PspPI	GGNCC	1 cut(s)	418
PstI	CTGCAG	1 cut(s)	880
PstNI	CAGNNNCTG	1 cut(s)	377
PsuI	RGATCY	1 cut(s)	434
PvuII	CAGCTG	1 cut(s)	455
RsaI	GTAC	3 cut(s)	619, 655, 962
RsaNI	GTAC	3 cut(s)	618, 654, 961
RseI	CAYNNNNRTG	2 cut(s)	708, 968
SaqAI	TTAA	4 cut(s)	162, 251, 741, 924
SatI	GCNGC	4 cut(s)	462, 687, 844, 1020
Sau3AI	GATC	3 cut(s)	42, 434, 598
Sau96I	GGNCC	1 cut(s)	418
ScaI	AGTACT	1 cut(s)	619
SduI	GDGCHC	2 cut(s)	736, 943
SfaNI	GCATC	5 cut(s)	88, 110, 220, 769, 846
SfcI	CTRYAG	2 cut(s)	489, 876
Sfr274I	CTCGAG	1 cut(s)	298
SgrAI	CRCCGGYG	1 cut(s)	641
SinI	GGWCC	1 cut(s)	418
SlaI	CTCGAG	1 cut(s)	298
SmiMI	CAYNNNNRTG	2 cut(s)	708, 968
SmlI	CTYRAG	2 cut(s)	298, 740
SmoI	CTYRAG	2 cut(s)	298, 740
Sse9I	AATT	5 cut(s)	248, 263, 287, 628, 800
SsiI	CCGC	3 cut(s)	686, 834, 843
SspMI	CTAG	1 cut(s)	783
StyI	CCWWGG	4 cut(s)	421, 465, 553, 865
TaaI	ACNGT	4 cut(s)	367, 379, 533, 566
TaiI	ACGT	2 cut(s)	148, 363
TaqI	TCGA	3 cut(s)	299, 307, 597
TasI	AATT	5 cut(s)	248, 263, 287, 628, 800
TatI	WGTACW	1 cut(s)	617
TauI	GCSGC	2 cut(s)	689, 846
TfiI	GAWTC	3 cut(s)	215, 309, 474
Tru1I	TTAA	4 cut(s)	162, 251, 741, 924
Tru9I	TTAA	4 cut(s)	162, 251, 741, 924
TscAI	CASTG	2 cut(s)	131, 1039
TseFI	GTSAC	2 cut(s)	560, 701
TseI	GCWGC	2 cut(s)	461, 1019
Tsp45I	GTSAC	2 cut(s)	560, 701
TspDTI	ATGAA	5 cut(s)	280, 297, 369, 583, 811
TspRI	CASTG	2 cut(s)	131, 1039
Vha464I	CTTAAG	1 cut(s)	740
VpaK11BI	GGWCC	1 cut(s)	418
XagI	CCTNNNNNAGG	1 cut(s)	740
XapI	RAATTY	1 cut(s)	287
XceI	RCATGY	1 cut(s)	660
XcmI	CCANNNNNNNNNTGG	1 cut(s)	428
XhoI	CTCGAG	1 cut(s)	298
XmnI	GAANNNNTTC	2 cut(s)	179, 711
XspI	CTAG	1 cut(s)	783
ZrmI	AGTACT	1 cut(s)	619
Zsp2I	ATGCAT	1 cut(s)	103

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.