Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0000141

Physical Location & Seq

Genomic Coordinates Reverse (-)

43434886 .. 43436240

Gene Structure 1355 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G021900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1023 bp

ATGGAGTTCATCAAACACAGCAAATTTATCTGTTTTGCCTTGATCCTCATGTTGGGGGCCTGGTCTTCAGAAGCCACTTCTCGCAGCCTGCAAGATGCATTAATGTATGGGAGATACGAGCAATGGATGACTCGTTACGGACGCGTATACACTGACACTGATGAGAAGGAGAAGCGGTTCAAGATATTCAAGGAAAATGTAGCATTTATAGAATCTTCCAATGACAAAGCAAACAAACCTTACAAACTAAGTGTCAATGGATTTGCAGACCTTACAAATGAAGAGTTCACAGCCTCAAGAAATCGATTTAAGGCTCATGAATGTTCCACAAAGACCACTTCTTTCAAATATGAAAATGCTACTGTGCCAGCAACAATGGACTGGAGACAGAAAGGAGCTGTTACCCCAATCAAGGACCAAGGCCAATGTGGTTGCTGTTGGGCGTTCTCAGCAGTGGCAGCCATGGAAGGAATTACTCAACTCACAACTGGTAAACTGATTTCTTTGTCAGAGCAAGAGCTGGTTGACTGTGATGTTAATGGTGAAGACCAAGGTTGTGAGGGTGGCCTCATGGATGATGCCTTTCAGTTCATCAATCAAAACCATGGACTAAGTACCGAGGCCAATTATCCCTACACAGGTGTTGATGGTACATGCAATGCTAAGAAAGAAGCAAACCATGCAGCCTCGATAACTGGCCACGAAGATGTGCCTGCAAACAGTGAAAGCTCCCTACTTAATGCTGTTGCTAATCAACCAATTTCTGTTGCCATTGATGCCAGCGGATCTGATTTCCAATTCTATTCGAGTGGTGTTTTCACAGGAACATGCGGAACGAGCCTAGACCATGGCGTTACCGCTGTTGGTTATGGTGTCAGCGATGATGGGTTTAAGTATTGGTTGGTGAAGAACTCTTGGGGGACAGAATGGGGTGAACAAGGATACATAAGAATGCAAAGAGATGTTGATGCACCGGAAGGCCTCTGTGGTATTGCTATGGAAGCCTCTTATCCCACTGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000323 GO:0000325 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009505 GO:0009555 GO:0009605 GO:0009607 GO:0009620 GO:0009626 GO:0009791 GO:0009908 GO:0009987 GO:0010623 GO:0012501 GO:0012505 GO:0016787 GO:0019538 GO:0022414 GO:0030154 GO:0030163 GO:0030312 GO:0032501 GO:0032502 GO:0033554 GO:0034050 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048468 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050832 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0070011 GO:0071704 GO:0071944 GO:0090567 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I29 Peptidase_C1

Protein Analysis

340

Amino Acids

37.36

Weight (kDa)

4.81

Isoelectric Point (pI)

19.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I29	PF08246	39 - 96	1.2e-19	Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1	PF00112	122 - 339	8.1e-85	Papain family cysteine protease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22160
fragaria_vesca	FvH4_1g23580 FvH4_1g25982 FvH4_2g17070 FvH4_3g40500 FvH4_6g27180 FvH4_6g27320 FvH4_6g33300 FvH4_6g33310 FvH4_7g09480 FvH4_7g13000 FvH4_7g13320 FvH4_7g13600
malus_domestica	MD00G1208000.v1.1 MD09G1238200.v1.1 MD09G1238600.v1.1 MD09G1238800.v1.1 MD09G1239100.v1.1 MD16G1226900.v1.1 MD16G1242700.v1.1 MD16G1244200.v1.1 MD16G1245500.v1.1 MD16G1245800.v1.1 MD17G1231600.v1.1 MD17G1231700.v1.1 MD17G1231800.v1.1 MD17G1232200.v1.1 MD17G1232300.v1.1 MD17G1232400.v1.1
prunus_persica	Prupe.1G072300_v2.0.a1 Prupe.1G072400_v2.0.a1 Prupe.3G106300_v2.0.a1 Prupe.3G106400_v2.0.a1 Prupe.3G119400_v2.0.a1 Prupe.3G120600_v2.0.a1 Prupe.3G121900_v2.0.a1 Prupe.3G122000_v2.0.a1 Prupe.3G122100_v2.0.a1 Prupe.3G122200_v2.0.a1 Prupe.3G122700_v2.0.a1 Prupe.5G055900_v2.0.a1 Prupe.5G056500_v2.0.a1
pyrus_communis	pycom09g15770 pycom09g15780 pycom09g15790 pycom16g20640 pycom17g18390
rosa_chinensis	RchiOBHm_Chr1g0352141 RchiOBHm_Chr1g0352581 RchiOBHm_Chr1g0352601 RchiOBHm_Chr1g0352621 RchiOBHm_Chr1g0352631 RchiOBHm_Chr2g0119131 RchiOBHm_Chr2g0128691 RchiOBHm_Chr2g0128701 RchiOBHm_Chr2g0129151 RchiOBHm_Chr2g0129221 RchiOBHm_Chr2g0129401 RchiOBHm_Chr2g0129421 RchiOBHm_Chr2g0129431 RchiOBHm_Chr2g0129471 RchiOBHm_Chr2g0129481 RchiOBHm_Chr2g0129491 RchiOBHm_Chr2g0143051 RchiOBHm_Chr2g0143121 RchiOBHm_Chr2g0143171 RchiOBHm_Chr3g0457341 RchiOBHm_Chr5g0049011 RchiOBHm_Chr6g0281281 RchiOBHm_Chr6g0281311
rosa_laevigata	RLG00000012975 RLG00000012976 RLG00000012979 RLG00000018447 RLG00000019018 RLG00000019061 RLG00000019066 RLG00000019078 RLG00000019079 RLG00000019080 RLG00000019083 RLG00000019085 RLG00000020009 RLG00000020010 RLG00000025234 RLG00000028326 RLG00000028327 RLG00000028328 RLG00000028329 RLG00000028357 RLG00000031784
rosa_multiflora	Rmu_co8169188.1_g000001 Rmu_co8261007.1_g000001 Rmu_co8314361.1_g000001 Rmu_sc0000109.1_g000014 Rmu_sc0000638.1_g000020 Rmu_sc0000847.1_g000020 Rmu_sc0000847.1_g000028 Rmu_sc0000847.1_g000037 Rmu_sc0000847.1_g000046 Rmu_sc0000911.1_g000034 Rmu_sc0000999.1_g000021 Rmu_sc0001171.1_g000013 Rmu_sc0001171.1_g000018 Rmu_sc0001171.1_g000019 Rmu_sc0001653.1_g000004 Rmu_sc0002277.1_g000005 Rmu_sc0003479.1_g000001 Rmu_sc0005118.1_g000006 Rmu_sc0005118.1_g000008 Rmu_sc0005227.1_g000012 Rmu_sc0005442.1_g000010 Rmu_sc0005514.1_g000005 Rmu_sc0005996.1_g000014 Rmu_sc0008800.1_g000002 Rmu_sc0008800.1_g000010 Rmu_sc0008800.1_g000014
rosa_roxburghii	Rroxscaffold_1G00065560 Rroxscaffold_2G00102080 Rroxscaffold_2G00102090 Rroxscaffold_2G00102110 Rroxscaffold_2G00114560 Rroxscaffold_2G00114570 Rroxscaffold_2G00114610 Rroxscaffold_2G00114620 Rroxscaffold_2G00114640 Rroxscaffold_2G00114740 Rroxscaffold_2G00114790 Rroxscaffold_2G00115860 Rroxscaffold_2G00124490 Rroxscaffold_4G00302260 Rroxscaffold_4G00302530 Rroxscaffold_4G00302550 Rroxscaffold_4G00302560 Rroxscaffold_4G00302620 Rroxscaffold_6G00421980 Rroxscaffold_7G00187140 Rroxscaffold_7G00187170
rosa_rugosa	Rorug01G0225000 Rorug01G0230200 Rorug02G0220500 Rorug02G0280000 Rorug02G0285200 Rorug02G0285400 Rorug02G0286300 Rorug02G0286300 Rorug02G0286400 Rorug02G0286900 Rorug02G0377800 Rorug02G0377900 Rorug02G0378000 Rorug02G0378000 Rorug02G0378800 Rorug03G0019800 Rorug04G0452700 Rorug06G0140300 Rorug06G0140500 Rorug06G0140600
rosa_samantha	Rh1CG223600 Rh1CG227200 Rh1CG227500 Rh1CG227600 Rh2BG341200 Rh2BG345300 Rh2BG440200 Rh2DG284500 Rh2DG357900 Rh2DG362100 Rh2DG362600 Rh2DG364500 Rh2DG364600 Rh2DG364700 Rh2DG364800 Rh2DG364900 Rh2DG365000 Rh2DG365400 Rh2DG450400 Rh3AG080000 Rh3BG081900 Rh5AG322100 Rh5BG079800 Rh6AG252100 Rh6BG255600
rosa_wichuraiana	Rw1G020770 Rw1G021290 Rw2G022120 Rw2G026940 Rw2G027360 Rw2G027370 Rw2G027950 Rw2G027960 Rw2G027970 Rw2G035220 Rw3G006890 Rw6G021900 Rw6G021930 Rw6G021950 Rw6G021970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	147
AccII	CGCG	1 cut(s)	144
AciI	CCGC	4 cut(s)	175, 783, 831, 858
AclWI	GGATC	2 cut(s)	37, 793
AcoI	YGGCCR	1 cut(s)	697
AcsI	RAATTY	1 cut(s)	23
AcuI	CTGAAG	1 cut(s)	51
AfaI	GTAC	2 cut(s)	616, 652
AfiI	CCNNNNNNNGG	3 cut(s)	52, 412, 638
AflIII	ACRYGT	1 cut(s)	142
AgsI	TTSAA	3 cut(s)	181, 190, 346
AjnI	CCWGG	1 cut(s)	59
AloI	GAACNNNNNNTCC	2 cut(s)	161, 193
AluBI	AGCT	3 cut(s)	398, 520, 729
AluI	AGCT	3 cut(s)	398, 520, 729
Alw26I	GTCTC	1 cut(s)	379
AlwI	GGATC	2 cut(s)	37, 793
AoxI	GGCC	6 cut(s)	57, 421, 565, 621, 697, 979
ApeKI	GCWGC	3 cut(s)	84, 458, 683
ApoI	RAATTY	1 cut(s)	23
ArsI	GACNNNNNNTTYG	2 cut(s)	237, 269
AseI	ATTAAT	1 cut(s)	101
Asp700I	GAANNNNTTC	1 cut(s)	176
AspS9I	GGNCC	2 cut(s)	57, 415
AsuHPI	GGTGA	3 cut(s)	554, 916, 944
AvaII	GGWCC	1 cut(s)	415
BalI	TGGCCA	1 cut(s)	699
BbsI	GAAGAC	2 cut(s)	57, 552
BbvI	GCAGC	3 cut(s)	96, 470, 695
BccI	CCATC	2 cut(s)	641, 878
BciT130I	CCWGG	1 cut(s)	61
BciVI	GTATCC	1 cut(s)	935
BcoDI	GTCTC	1 cut(s)	379
BfaI	CTAG	1 cut(s)	842
BfuI	GTATCC	1 cut(s)	935
BisI	GCNGC	3 cut(s)	85, 459, 684
BlsI	GCNGC	3 cut(s)	86, 460, 685
Bme1390I	CCNGG	1 cut(s)	61
Bme18I	GGWCC	1 cut(s)	415
BmgT120I	GGNCC	2 cut(s)	57, 415
BmiI	GGNNCC	1 cut(s)	58
BmrFI	CCNGG	1 cut(s)	61
BmsI	GCATC	4 cut(s)	85, 568, 766, 958
BpiI	GAAGAC	2 cut(s)	57, 552
BpmI	CTGGAG	1 cut(s)	403
BpuEI	CTTGAG	1 cut(s)	280
Bsa29I	ATCGAT	1 cut(s)	304
BsaJI	CCNNGG	6 cut(s)	418, 462, 550, 604, 618, 847
BsaWI	WCCGGW	1 cut(s)	973
BsaXI	ACNNNNNCTCC	2 cut(s)	161, 191
Bsc4I	CCNNNNNNNGG	3 cut(s)	52, 412, 638
Bse1I	ACTGG	3 cut(s)	386, 493, 700
Bse3DI	GCAATG	2 cut(s)	128, 664
BseBI	CCWGG	1 cut(s)	61
BseCI	ATCGAT	1 cut(s)	304
BseDI	CCNNGG	6 cut(s)	418, 462, 550, 604, 618, 847
BseGI	GGATG	2 cut(s)	132, 580
BseLI	CCNNNNNNNGG	3 cut(s)	52, 412, 638
BseMI	GCAATG	2 cut(s)	128, 664
BseMII	CTCAG	1 cut(s)	462
BseNI	ACTGG	3 cut(s)	386, 493, 700
BseXI	GCAGC	3 cut(s)	96, 470, 695
Bsh1236I	CGCG	1 cut(s)	144
BshFI	GGCC	6 cut(s)	59, 423, 567, 623, 699, 981
BshVI	ATCGAT	1 cut(s)	304
BsiSI	CCGG	1 cut(s)	974
BslFI	GGGAC	1 cut(s)	934
BslI	CCNNNNNNNGG	3 cut(s)	52, 412, 638
BsmAI	GTCTC	1 cut(s)	379
BsmFI	GGGAC	1 cut(s)	934
BsmI	GAATGC	1 cut(s)	957
BsnI	GGCC	6 cut(s)	59, 423, 567, 623, 699, 981
Bsp143I	GATC	2 cut(s)	42, 785
Bsp19I	CCATGG	3 cut(s)	462, 604, 847
BspACI	CCGC	4 cut(s)	175, 783, 831, 858
BspANI	GGCC	6 cut(s)	59, 423, 567, 623, 699, 981
BspCNI	CTCAG	1 cut(s)	461
BspDI	ATCGAT	1 cut(s)	304
BspFNI	CGCG	1 cut(s)	144
BspHI	TCATGA	1 cut(s)	316
BspLI	GGNNCC	1 cut(s)	58
BspPI	GGATC	2 cut(s)	37, 793
BsrDI	GCAATG	2 cut(s)	128, 664
BsrI	ACTGG	3 cut(s)	386, 493, 700
BssECI	CCNNGG	6 cut(s)	418, 462, 550, 604, 618, 847
BssMI	GATC	2 cut(s)	42, 785
BssNAI	GTATAC	1 cut(s)	148
BssT1I	CCWWGG	5 cut(s)	418, 462, 550, 604, 847
Bst1107I	GTATAC	1 cut(s)	148
Bst2UI	CCWGG	1 cut(s)	61
Bst4CI	ACNGT	3 cut(s)	364, 530, 722
Bst6I	CTCTTC	1 cut(s)	276
BstAPI	GCANNNNNTGC	1 cut(s)	680
BstC8I	GCNNGC	4 cut(s)	89, 369, 714, 781
BstDEI	CTNAG	4 cut(s)	248, 448, 611, 663
BstDSI	CCRYGG	3 cut(s)	462, 604, 847
BstF5I	GGATG	2 cut(s)	132, 580
BstFNI	CGCG	1 cut(s)	144
BstKTI	GATC	2 cut(s)	45, 788
BstMAI	GTCTC	1 cut(s)	379
BstMBI	GATC	2 cut(s)	42, 785
BstMWI	GCNNNNNNNGC	6 cut(s)	449, 458, 680, 776, 837, 1001
BstNI	CCWGG	1 cut(s)	61
BstNSI	RCATGY	2 cut(s)	657, 831
BstSCI	CCNGG	1 cut(s)	59
BstUI	CGCG	1 cut(s)	144
BstV1I	GCAGC	3 cut(s)	96, 470, 695
BstV2I	GAAGAC	2 cut(s)	57, 552
BstX2I	RGATCY	1 cut(s)	785
BstYI	RGATCY	1 cut(s)	785
BstZ17I	GTATAC	1 cut(s)	148
Bsu15I	ATCGAT	1 cut(s)	304
BsuI	GTATCC	1 cut(s)	935
BsuRI	GGCC	6 cut(s)	59, 423, 567, 623, 699, 981
BsuTUI	ATCGAT	1 cut(s)	304
BtgI	CCRYGG	3 cut(s)	462, 604, 847
BtgZI	GCGATG	1 cut(s)	894
BtsCI	GGATG	2 cut(s)	132, 580
BtsI	GCAGTG	2 cut(s)	459, 1014
BtsIMutI	CAGTG	5 cut(s)	150, 156, 459, 727, 1014
Cac8I	GCNNGC	4 cut(s)	89, 369, 714, 781
CciI	TCATGA	1 cut(s)	316
Cfr13I	GGNCC	2 cut(s)	57, 415
ClaI	ATCGAT	1 cut(s)	304
CseI	GACGC	1 cut(s)	150
Csp6I	GTAC	2 cut(s)	615, 651
CviAII	CATG	9 cut(s)	49, 317, 463, 571, 605, 654, 680, 828, 848
CviQI	GTAC	2 cut(s)	615, 651
DdeI	CTNAG	4 cut(s)	248, 448, 611, 663
DpnI	GATC	2 cut(s)	44, 787
DpnII	GATC	2 cut(s)	42, 785
EaeI	YGGCCR	1 cut(s)	697
Eam1104I	CTCTTC	1 cut(s)	276
EarI	CTCTTC	1 cut(s)	276
Eco130I	CCWWGG	5 cut(s)	418, 462, 550, 604, 847
Eco147I	AGGCCT	1 cut(s)	981
Eco47I	GGWCC	1 cut(s)	415
Eco57I	CTGAAG	1 cut(s)	51
EcoO109I	RGGNCCY	1 cut(s)	57
EcoRII	CCWGG	1 cut(s)	59
EcoT14I	CCWWGG	5 cut(s)	418, 462, 550, 604, 847
EcoT22I	ATGCAT	1 cut(s)	100
ErhI	CCWWGG	5 cut(s)	418, 462, 550, 604, 847
FaeI	CATG	9 cut(s)	52, 320, 466, 574, 608, 657, 683, 831, 851
FaqI	GGGAC	1 cut(s)	934
FatI	CATG	9 cut(s)	48, 316, 462, 570, 604, 653, 679, 827, 847
FblI	GTMKAC	1 cut(s)	147
Fnu4HI	GCNGC	3 cut(s)	85, 459, 684
FokI	GGATG	2 cut(s)	139, 587
Fsp4HI	GCNGC	3 cut(s)	85, 459, 684
FspBI	CTAG	1 cut(s)	842
GluI	GCNGC	3 cut(s)	85, 459, 684
GsuI	CTGGAG	1 cut(s)	403
HaeIII	GGCC	6 cut(s)	59, 423, 567, 623, 699, 981
HapII	CCGG	1 cut(s)	974
HgaI	GACGC	1 cut(s)	150
Hin1II	CATG	9 cut(s)	52, 320, 466, 574, 608, 657, 683, 831, 851
HincII	GTYRAC	1 cut(s)	526
HindII	GTYRAC	1 cut(s)	526
HinfI	GANTC	2 cut(s)	130, 212
HpaII	CCGG	1 cut(s)	974
HphI	GGTGA	3 cut(s)	554, 916, 944
Hpy166II	GTNNAC	5 cut(s)	148, 288, 494, 526, 935
Hpy188I	TCNGA	3 cut(s)	70, 511, 790
Hpy188III	TCNNGA	3 cut(s)	181, 297, 317
Hpy8I	GTNNAC	5 cut(s)	148, 288, 494, 526, 935
HpyAV	CCTTC	3 cut(s)	160, 461, 971
HpyCH4III	ACNGT	3 cut(s)	364, 530, 722
HpyCH4V	TGCA	9 cut(s)	91, 98, 266, 657, 683, 716, 955, 971, 1019
HpyF10VI	GCNNNNNNNGC	6 cut(s)	449, 458, 680, 776, 837, 1001
HpyF3I	CTNAG	4 cut(s)	248, 448, 611, 663
Hsp92II	CATG	9 cut(s)	52, 320, 466, 574, 608, 657, 683, 831, 851
Kzo9I	GATC	2 cut(s)	42, 785
LmnI	GCTCC	2 cut(s)	395, 734
Lsp1109I	GCAGC	3 cut(s)	96, 470, 695
LweI	GCATC	4 cut(s)	85, 568, 766, 958
MaeI	CTAG	1 cut(s)	842
MaeIII	GTNAC	3 cut(s)	134, 400, 853
MalI	GATC	2 cut(s)	44, 787
MboI	GATC	2 cut(s)	42, 785
MboII	GAAGA	6 cut(s)	57, 207, 293, 557, 716, 919
MflI	RGATCY	1 cut(s)	785
MlsI	TGGCCA	1 cut(s)	699
MluCI	AATT	5 cut(s)	23, 471, 625, 759, 797
MluI	ACGCGT	1 cut(s)	142
MluNI	TGGCCA	1 cut(s)	699
MlyI	GAGTC	1 cut(s)	124
MnlI	CCTC	8 cut(s)	56, 304, 553, 578, 613, 697, 992, 1015
Mox20I	TGGCCA	1 cut(s)	699
Mph1103I	ATGCAT	1 cut(s)	100
MroXI	GAANNNNTTC	1 cut(s)	176
MscI	TGGCCA	1 cut(s)	699
MseI	TTAA	5 cut(s)	101, 309, 537, 738, 891
MslI	CAYNNNNRTG	2 cut(s)	705, 950
Msp20I	TGGCCA	1 cut(s)	699
MspA1I	CMGCKG	2 cut(s)	783, 860
MspI	CCGG	1 cut(s)	974
MspR9I	CCNGG	1 cut(s)	61
Mva1269I	GAATGC	1 cut(s)	957
MvaI	CCWGG	1 cut(s)	61
MvnI	CGCG	1 cut(s)	144
MwoI	GCNNNNNNNGC	6 cut(s)	449, 458, 680, 776, 837, 1001
NcoI	CCATGG	3 cut(s)	462, 604, 847
NdeII	GATC	2 cut(s)	42, 785
NlaIII	CATG	9 cut(s)	52, 320, 466, 574, 608, 657, 683, 831, 851
NlaIV	GGNNCC	1 cut(s)	58
NsiI	ATGCAT	1 cut(s)	100
NspI	RCATGY	2 cut(s)	657, 831
PagI	TCATGA	1 cut(s)	316
PceI	AGGCCT	1 cut(s)	981
PctI	GAATGC	1 cut(s)	957
PdmI	GAANNNNTTC	1 cut(s)	176
PfeI	GAWTC	1 cut(s)	212
PkrI	GCNGC	3 cut(s)	86, 460, 685
PleI	GAGTC	1 cut(s)	124
PpsI	GAGTC	1 cut(s)	124
PshBI	ATTAAT	1 cut(s)	101
Psp6I	CCWGG	1 cut(s)	59
PspGI	CCWGG	1 cut(s)	59
PspN4I	GGNNCC	1 cut(s)	58
PspPI	GGNCC	2 cut(s)	57, 415
PsuI	RGATCY	1 cut(s)	785
RsaI	GTAC	2 cut(s)	616, 652
RsaNI	GTAC	2 cut(s)	615, 651
RseI	CAYNNNNRTG	2 cut(s)	705, 950
SaqAI	TTAA	5 cut(s)	101, 309, 537, 738, 891
SatI	GCNGC	3 cut(s)	85, 459, 684
Sau3AI	GATC	2 cut(s)	42, 785
Sau96I	GGNCC	2 cut(s)	57, 415
SchI	GAGTC	1 cut(s)	124
ScrFI	CCNGG	1 cut(s)	61
SetI	ASST	7 cut(s)	241, 273, 400, 522, 556, 643, 731
SfaNI	GCATC	4 cut(s)	85, 568, 766, 958
SinI	GGWCC	1 cut(s)	415
SmiMI	CAYNNNNRTG	2 cut(s)	705, 950
SmlI	CTYRAG	1 cut(s)	295
SmoI	CTYRAG	1 cut(s)	295
Sse9I	AATT	5 cut(s)	23, 471, 625, 759, 797
SseBI	AGGCCT	1 cut(s)	981
SsiI	CCGC	4 cut(s)	175, 783, 831, 858
SspMI	CTAG	1 cut(s)	842
StuI	AGGCCT	1 cut(s)	981
StyD4I	CCNGG	1 cut(s)	59
StyI	CCWWGG	5 cut(s)	418, 462, 550, 604, 847
TaaI	ACNGT	3 cut(s)	364, 530, 722
TaqI	TCGA	3 cut(s)	304, 689, 806
TasI	AATT	5 cut(s)	23, 471, 625, 759, 797
TfiI	GAWTC	1 cut(s)	212
Tru1I	TTAA	5 cut(s)	101, 309, 537, 738, 891
Tru9I	TTAA	5 cut(s)	101, 309, 537, 738, 891
TscAI	CASTG	5 cut(s)	157, 163, 459, 727, 1021
TseI	GCWGC	3 cut(s)	84, 458, 683
TspDTI	ATGAA	4 cut(s)	294, 333, 366, 580
TspGWI	ACGGA	1 cut(s)	153
TspRI	CASTG	5 cut(s)	157, 163, 459, 727, 1021
VpaK11BI	GGWCC	1 cut(s)	415
VspI	ATTAAT	1 cut(s)	101
XapI	RAATTY	1 cut(s)	23
XceI	RCATGY	2 cut(s)	657, 831
XcmI	CCANNNNNNNNNTGG	1 cut(s)	425
XmiI	GTMKAC	1 cut(s)	147
XmnI	GAANNNNTTC	1 cut(s)	176
XspI	CTAG	1 cut(s)	842
Zsp2I	ATGCAT	1 cut(s)	100

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.