Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000141

Physical Location & Seq

Genomic Coordinates Reverse (-)

46067890 .. 46069027

Gene Structure 1138 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000019085

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1023 bp

ATGGAGTTCATCAACCACACCAAATTTATATGTTTGGCATTGATTCTCATGTTGGGGGCTTGGTCTTCTGAAGCCACTTCCCGCAGTCTCCAAGATGCAATGATGTATGGGAGATACGAGCAATGGATGGCTCGTTATAGACGCGTATACAGCGACATTGACGAGAAGGAGAAGCGCTTCCAGATATTCAAGGAAAATGTAGCTTTTATAGAATCTTCCAATGGCGAAGCAAACAAACCTTACAAATTAAGTGTCAATCGATTTGCAGACCTTACAAATGAAGAGTTCACAGCCTCAAGAAATCGATTCAAGGGGCATGAATGTTCCACAACAACCACTTCTTTCAAATATGAAAATGTTACCGTCCCAGCTACAGTGGACTGGAGACAGAAAGGAGCTGTGACTCCCATCAAGGACCAAGGCCAATGTGGATGCTGTTGGGCTTTCTCAGCCGTGGCAGCTATGGAAGGAATTACTCAACTTAAAACAGGTAAACTAATCTCTTTGTCTGAGCAAGAGCTAGTTGACTGTGATGTCAATGGTGAAGATCAAGGCTGTGAAGGAGGCTTGATGGATGATGCATTTCAGTTCATCAATCAAAATCATGGACTTAGTACCGAGGCTAATTACCCCTATACTGGTGTTGACGGTACATGCAATGCCAAGAAGGAAGCAAACCATGCAGCCTCAATCACTGGCCACGAAGATGTGCCTGCAAATAGTGAAAGTGCACTACTTAAGGCTGTTGCCAATCAACCTATTTCTGTTGCCATTGATGCTAGCGGATCTGATTTCCAATTCTATTCAAGTGGTGTTTTCACAGGAACCTGTGGAACTAGCCTAGACCATGGTGTTACTGCTGTTGGTTATGGTGTCAGCGATGATGGGACTAAGTATTGGTTGGTGAAGAACTCATGGGGCGCAGAATGGGGCGAAGAAGGTTACATAAGAATGCAAAGAGATGTTGCTGCACAGGAAGGTCTCTGTGGCATTGCTATGGCAGCCTCTTACCCCACTGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000323 GO:0000325 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009505 GO:0009555 GO:0009605 GO:0009607 GO:0009620 GO:0009626 GO:0009791 GO:0009908 GO:0009987 GO:0010623 GO:0012501 GO:0012505 GO:0016787 GO:0019538 GO:0022414 GO:0030154 GO:0030163 GO:0030312 GO:0032501 GO:0032502 GO:0033554 GO:0034050 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048468 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050832 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0070011 GO:0071704 GO:0071944 GO:0090567 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I29 Peptidase_C1

Protein Analysis

341

Amino Acids

37.29

Weight (kDa)

4.87

Isoelectric Point (pI)

22.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I29	PF08246	39 - 96	1.1e-18	Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1	PF00112	122 - 339	6.3e-85	Papain family cysteine protease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22160
fragaria_vesca	FvH4_1g23580 FvH4_1g25982 FvH4_2g17070 FvH4_3g40500 FvH4_6g27180 FvH4_6g27320 FvH4_6g33300 FvH4_6g33310 FvH4_7g09480 FvH4_7g13000 FvH4_7g13320 FvH4_7g13600
malus_domestica	MD00G1208000.v1.1 MD09G1238200.v1.1 MD09G1238600.v1.1 MD09G1238800.v1.1 MD09G1239100.v1.1 MD16G1226900.v1.1 MD16G1242700.v1.1 MD16G1244200.v1.1 MD16G1245500.v1.1 MD16G1245800.v1.1 MD17G1231600.v1.1 MD17G1231700.v1.1 MD17G1231800.v1.1 MD17G1232200.v1.1 MD17G1232300.v1.1 MD17G1232400.v1.1
prunus_persica	Prupe.1G072300_v2.0.a1 Prupe.1G072400_v2.0.a1 Prupe.3G106300_v2.0.a1 Prupe.3G106400_v2.0.a1 Prupe.3G119400_v2.0.a1 Prupe.3G120600_v2.0.a1 Prupe.3G121900_v2.0.a1 Prupe.3G122000_v2.0.a1 Prupe.3G122100_v2.0.a1 Prupe.3G122200_v2.0.a1 Prupe.3G122700_v2.0.a1 Prupe.5G055900_v2.0.a1 Prupe.5G056500_v2.0.a1
pyrus_communis	pycom09g15770 pycom09g15780 pycom09g15790 pycom16g20640 pycom17g18390
rosa_chinensis	RchiOBHm_Chr1g0352141 RchiOBHm_Chr1g0352581 RchiOBHm_Chr1g0352601 RchiOBHm_Chr1g0352621 RchiOBHm_Chr1g0352631 RchiOBHm_Chr2g0119131 RchiOBHm_Chr2g0128691 RchiOBHm_Chr2g0128701 RchiOBHm_Chr2g0129151 RchiOBHm_Chr2g0129221 RchiOBHm_Chr2g0129401 RchiOBHm_Chr2g0129421 RchiOBHm_Chr2g0129431 RchiOBHm_Chr2g0129471 RchiOBHm_Chr2g0129481 RchiOBHm_Chr2g0129491 RchiOBHm_Chr2g0143051 RchiOBHm_Chr2g0143121 RchiOBHm_Chr2g0143171 RchiOBHm_Chr3g0457341 RchiOBHm_Chr5g0049011 RchiOBHm_Chr6g0281281 RchiOBHm_Chr6g0281311
rosa_laevigata	RLG00000012975 RLG00000012976 RLG00000012979 RLG00000018447 RLG00000019018 RLG00000019061 RLG00000019066 RLG00000019078 RLG00000019079 RLG00000019080 RLG00000019083 RLG00000019085 RLG00000020009 RLG00000020010 RLG00000025234 RLG00000028326 RLG00000028327 RLG00000028328 RLG00000028329 RLG00000028357 RLG00000031784
rosa_multiflora	Rmu_co8169188.1_g000001 Rmu_co8261007.1_g000001 Rmu_co8314361.1_g000001 Rmu_sc0000109.1_g000014 Rmu_sc0000638.1_g000020 Rmu_sc0000847.1_g000020 Rmu_sc0000847.1_g000028 Rmu_sc0000847.1_g000037 Rmu_sc0000847.1_g000046 Rmu_sc0000911.1_g000034 Rmu_sc0000999.1_g000021 Rmu_sc0001171.1_g000013 Rmu_sc0001171.1_g000018 Rmu_sc0001171.1_g000019 Rmu_sc0001653.1_g000004 Rmu_sc0002277.1_g000005 Rmu_sc0003479.1_g000001 Rmu_sc0005118.1_g000006 Rmu_sc0005118.1_g000008 Rmu_sc0005227.1_g000012 Rmu_sc0005442.1_g000010 Rmu_sc0005514.1_g000005 Rmu_sc0005996.1_g000014 Rmu_sc0008800.1_g000002 Rmu_sc0008800.1_g000010 Rmu_sc0008800.1_g000014
rosa_roxburghii	Rroxscaffold_1G00065560 Rroxscaffold_2G00102080 Rroxscaffold_2G00102090 Rroxscaffold_2G00102110 Rroxscaffold_2G00114560 Rroxscaffold_2G00114570 Rroxscaffold_2G00114610 Rroxscaffold_2G00114620 Rroxscaffold_2G00114640 Rroxscaffold_2G00114740 Rroxscaffold_2G00114790 Rroxscaffold_2G00115860 Rroxscaffold_2G00124490 Rroxscaffold_4G00302260 Rroxscaffold_4G00302530 Rroxscaffold_4G00302550 Rroxscaffold_4G00302560 Rroxscaffold_4G00302620 Rroxscaffold_6G00421980 Rroxscaffold_7G00187140 Rroxscaffold_7G00187170
rosa_rugosa	Rorug01G0225000 Rorug01G0230200 Rorug02G0220500 Rorug02G0280000 Rorug02G0285200 Rorug02G0285400 Rorug02G0286300 Rorug02G0286300 Rorug02G0286400 Rorug02G0286900 Rorug02G0377800 Rorug02G0377900 Rorug02G0378000 Rorug02G0378000 Rorug02G0378800 Rorug03G0019800 Rorug04G0452700 Rorug06G0140300 Rorug06G0140500 Rorug06G0140600
rosa_samantha	Rh1CG223600 Rh1CG227200 Rh1CG227500 Rh1CG227600 Rh2BG341200 Rh2BG345300 Rh2BG440200 Rh2DG284500 Rh2DG357900 Rh2DG362100 Rh2DG362600 Rh2DG364500 Rh2DG364600 Rh2DG364700 Rh2DG364800 Rh2DG364900 Rh2DG365000 Rh2DG365400 Rh2DG450400 Rh3AG080000 Rh3BG081900 Rh5AG322100 Rh5BG079800 Rh6AG252100 Rh6BG255600
rosa_wichuraiana	Rw1G020770 Rw1G021290 Rw2G022120 Rw2G026940 Rw2G027360 Rw2G027370 Rw2G027950 Rw2G027960 Rw2G027970 Rw2G035220 Rw3G006890 Rw6G021900 Rw6G021930 Rw6G021950 Rw6G021970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	533
AccI	GTMKAC	1 cut(s)	147
AccII	CGCG	1 cut(s)	144
AciI	CCGC	2 cut(s)	82, 783
AclWI	GGATC	1 cut(s)	793
AcoI	YGGCCR	1 cut(s)	697
AcsI	RAATTY	1 cut(s)	23
AcuI	CTGAAG	1 cut(s)	90
AfaI	GTAC	2 cut(s)	616, 652
AfeI	AGCGCT	1 cut(s)	176
AfiI	CCNNNNNNNGG	1 cut(s)	638
AflII	CTTAAG	1 cut(s)	737
AflIII	ACRYGT	1 cut(s)	142
AgsI	TTSAA	4 cut(s)	190, 310, 346, 807
AluBI	AGCT	5 cut(s)	203, 371, 398, 461, 520
AluI	AGCT	5 cut(s)	203, 371, 398, 461, 520
Alw21I	GWGCWC	1 cut(s)	733
Alw26I	GTCTC	3 cut(s)	92, 379, 986
Alw44I	GTGCAC	1 cut(s)	729
AlwI	GGATC	1 cut(s)	793
Aor51HI	AGCGCT	1 cut(s)	176
AoxI	GGCC	2 cut(s)	421, 697
ApaLI	GTGCAC	1 cut(s)	729
ApeKI	GCWGC	4 cut(s)	458, 683, 968, 1001
ApoI	RAATTY	1 cut(s)	23
ArsI	GACNNNNNNTTYG	2 cut(s)	237, 269
Asp700I	GAANNNNTTC	1 cut(s)	176
AspLEI	GCGC	2 cut(s)	177, 923
AspS9I	GGNCC	1 cut(s)	415
AsuHPI	GGTGA	2 cut(s)	554, 916
AsuNHI	GCTAGC	1 cut(s)	779
AvaII	GGWCC	1 cut(s)	415
BaeGI	GKGCMC	1 cut(s)	733
BalI	TGGCCA	1 cut(s)	699
BbsI	GAAGAC	1 cut(s)	57
Bbv12I	GWGCWC	1 cut(s)	733
BbvI	GCAGC	4 cut(s)	470, 695, 955, 1013
BccI	CCATC	4 cut(s)	121, 416, 565, 878
BceAI	ACGGC	1 cut(s)	437
BcoDI	GTCTC	3 cut(s)	92, 379, 986
BfaI	CTAG	4 cut(s)	521, 780, 837, 842
BfmI	CTRYAG	1 cut(s)	372
BfoI	RGCGCY	1 cut(s)	178
BfrI	CTTAAG	1 cut(s)	737
BisI	GCNGC	4 cut(s)	459, 684, 969, 1002
BlsI	GCNGC	4 cut(s)	460, 685, 970, 1003
Bme18I	GGWCC	1 cut(s)	415
BmgT120I	GGNCC	1 cut(s)	415
BmiI	GGNNCC	1 cut(s)	826
BmsI	GCATC	4 cut(s)	85, 422, 568, 766
BmtI	GCTAGC	1 cut(s)	783
BpiI	GAAGAC	1 cut(s)	57
BpmI	CTGGAG	1 cut(s)	403
BpuEI	CTTGAG	1 cut(s)	280
Bsa29I	ATCGAT	2 cut(s)	259, 304
BsaI	GGTCTC	1 cut(s)	986
BsaJI	CCNNGG	4 cut(s)	418, 453, 618, 847
Bsc4I	CCNNNNNNNGG	1 cut(s)	638
Bse1I	ACTGG	3 cut(s)	386, 643, 700
Bse3DI	GCAATG	4 cut(s)	105, 128, 664, 990
BseCI	ATCGAT	2 cut(s)	259, 304
BseDI	CCNNGG	4 cut(s)	418, 453, 618, 847
BseGI	GGATG	3 cut(s)	132, 437, 580
BseLI	CCNNNNNNNGG	1 cut(s)	638
BseMI	GCAATG	4 cut(s)	105, 128, 664, 990
BseMII	CTCAG	2 cut(s)	462, 501
BseNI	ACTGG	3 cut(s)	386, 643, 700
BseSI	GKGCMC	1 cut(s)	733
BseXI	GCAGC	4 cut(s)	470, 695, 955, 1013
BseYI	CCCAGC	1 cut(s)	367
BsgI	GTGCAG	1 cut(s)	954
Bsh1236I	CGCG	1 cut(s)	144
BshFI	GGCC	2 cut(s)	423, 699
BshVI	ATCGAT	2 cut(s)	259, 304
BsiHKAI	GWGCWC	1 cut(s)	733
BslFI	GGGAC	2 cut(s)	350, 901
BslI	CCNNNNNNNGG	1 cut(s)	638
BsmAI	GTCTC	3 cut(s)	92, 379, 986
BsmFI	GGGAC	2 cut(s)	350, 901
BsmI	GAATGC	1 cut(s)	957
BsnI	GGCC	2 cut(s)	423, 699
Bso31I	GGTCTC	1 cut(s)	986
Bsp1286I	GDGCHC	1 cut(s)	733
Bsp143I	GATC	2 cut(s)	547, 785
Bsp19I	CCATGG	1 cut(s)	847
BspACI	CCGC	2 cut(s)	82, 783
BspANI	GGCC	2 cut(s)	423, 699
BspCNI	CTCAG	2 cut(s)	461, 502
BspDI	ATCGAT	2 cut(s)	259, 304
BspFNI	CGCG	1 cut(s)	144
BspLI	GGNNCC	1 cut(s)	826
BspOI	GCTAGC	1 cut(s)	783
BspPI	GGATC	1 cut(s)	793
BspTI	CTTAAG	1 cut(s)	737
BspTNI	GGTCTC	1 cut(s)	986
BsrDI	GCAATG	4 cut(s)	105, 128, 664, 990
BsrI	ACTGG	3 cut(s)	386, 643, 700
BssECI	CCNNGG	4 cut(s)	418, 453, 618, 847
BssMI	GATC	2 cut(s)	547, 785
BssNAI	GTATAC	1 cut(s)	148
BssT1I	CCWWGG	2 cut(s)	418, 847
Bst1107I	GTATAC	1 cut(s)	148
Bst4CI	ACNGT	4 cut(s)	364, 376, 530, 650
Bst6I	CTCTTC	1 cut(s)	276
BstAFI	CTTAAG	1 cut(s)	737
BstAPI	GCANNNNNTGC	1 cut(s)	680
BstC8I	GCNNGC	2 cut(s)	714, 781
BstDEI	CTNAG	4 cut(s)	448, 510, 611, 891
BstDSI	CCRYGG	2 cut(s)	453, 847
BstF5I	GGATG	3 cut(s)	132, 437, 580
BstFNI	CGCG	1 cut(s)	144
BstH2I	RGCGCY	1 cut(s)	178
BstHHI	GCGC	2 cut(s)	177, 923
BstKTI	GATC	2 cut(s)	550, 788
BstMAI	GTCTC	3 cut(s)	92, 379, 986
BstMBI	GATC	2 cut(s)	547, 785
BstMWI	GCNNNNNNNGC	6 cut(s)	150, 449, 458, 680, 776, 1001
BstNSI	RCATGY	1 cut(s)	657
BstSFI	CTRYAG	1 cut(s)	372
BstSLI	GKGCMC	1 cut(s)	733
BstUI	CGCG	1 cut(s)	144
BstV1I	GCAGC	4 cut(s)	470, 695, 955, 1013
BstV2I	GAAGAC	1 cut(s)	57
BstX2I	RGATCY	1 cut(s)	785
BstYI	RGATCY	1 cut(s)	785
BstZ17I	GTATAC	1 cut(s)	148
Bsu15I	ATCGAT	2 cut(s)	259, 304
BsuRI	GGCC	2 cut(s)	423, 699
BsuTUI	ATCGAT	2 cut(s)	259, 304
BtgI	CCRYGG	2 cut(s)	453, 847
BtgZI	GCGATG	1 cut(s)	894
BtsCI	GGATG	3 cut(s)	132, 437, 580
BtsI	GCAGTG	1 cut(s)	1014
BtsIMutI	CAGTG	3 cut(s)	381, 693, 1014
Cac8I	GCNNGC	2 cut(s)	714, 781
CfoI	GCGC	2 cut(s)	177, 923
Cfr13I	GGNCC	1 cut(s)	415
ClaI	ATCGAT	2 cut(s)	259, 304
CseI	GACGC	1 cut(s)	150
Csp6I	GTAC	2 cut(s)	615, 651
CviAII	CATG	7 cut(s)	49, 317, 605, 654, 680, 848, 915
CviQI	GTAC	2 cut(s)	615, 651
DdeI	CTNAG	4 cut(s)	448, 510, 611, 891
DpnI	GATC	2 cut(s)	549, 787
DpnII	GATC	2 cut(s)	547, 785
DrdI	GACNNNNNNGTC	1 cut(s)	533
DseDI	GACNNNNNNGTC	1 cut(s)	533
EaeI	YGGCCR	1 cut(s)	697
Eam1104I	CTCTTC	1 cut(s)	276
EarI	CTCTTC	1 cut(s)	276
Eco130I	CCWWGG	2 cut(s)	418, 847
Eco31I	GGTCTC	1 cut(s)	986
Eco47I	GGWCC	1 cut(s)	415
Eco47III	AGCGCT	1 cut(s)	176
Eco57I	CTGAAG	1 cut(s)	90
EcoT14I	CCWWGG	2 cut(s)	418, 847
EcoT22I	ATGCAT	1 cut(s)	583
ErhI	CCWWGG	2 cut(s)	418, 847
FaeI	CATG	7 cut(s)	52, 320, 608, 657, 683, 851, 918
FaqI	GGGAC	2 cut(s)	350, 901
FatI	CATG	7 cut(s)	48, 316, 604, 653, 679, 847, 914
FauI	CCCGC	1 cut(s)	89
FblI	GTMKAC	1 cut(s)	147
Fnu4HI	GCNGC	4 cut(s)	459, 684, 969, 1002
FokI	GGATG	3 cut(s)	139, 444, 587
Fsp4HI	GCNGC	4 cut(s)	459, 684, 969, 1002
FspBI	CTAG	4 cut(s)	521, 780, 837, 842
GlaI	GCGC	2 cut(s)	176, 922
GluI	GCNGC	4 cut(s)	459, 684, 969, 1002
GsaI	CCCAGC	1 cut(s)	371
GsuI	CTGGAG	1 cut(s)	403
HaeII	RGCGCY	1 cut(s)	178
HaeIII	GGCC	2 cut(s)	423, 699
HgaI	GACGC	1 cut(s)	150
HhaI	GCGC	2 cut(s)	177, 923
Hin1II	CATG	7 cut(s)	52, 320, 608, 657, 683, 851, 918
Hin6I	GCGC	2 cut(s)	175, 921
HinP1I	GCGC	2 cut(s)	175, 921
HincII	GTYRAC	2 cut(s)	526, 646
HindII	GTYRAC	2 cut(s)	526, 646
HinfI	GANTC	4 cut(s)	43, 212, 306, 403
HphI	GGTGA	2 cut(s)	554, 916
Hpy166II	GTNNAC	7 cut(s)	148, 288, 379, 494, 526, 646, 731
Hpy188I	TCNGA	3 cut(s)	70, 511, 790
Hpy188III	TCNNGA	2 cut(s)	181, 297
Hpy8I	GTNNAC	7 cut(s)	148, 288, 379, 494, 526, 646, 731
HpyAV	CCTTC	6 cut(s)	160, 461, 554, 661, 932, 971
HpyCH4III	ACNGT	4 cut(s)	364, 376, 530, 650
HpyCH4V	TGCA	9 cut(s)	98, 266, 581, 657, 683, 716, 731, 955, 971
HpyF10VI	GCNNNNNNNGC	6 cut(s)	150, 449, 458, 680, 776, 1001
HpyF3I	CTNAG	4 cut(s)	448, 510, 611, 891
Hsp92II	CATG	7 cut(s)	52, 320, 608, 657, 683, 851, 918
HspAI	GCGC	2 cut(s)	175, 921
Kzo9I	GATC	2 cut(s)	547, 785
LmnI	GCTCC	1 cut(s)	395
Lsp1109I	GCAGC	4 cut(s)	470, 695, 955, 1013
LweI	GCATC	4 cut(s)	85, 422, 568, 766
MaeI	CTAG	4 cut(s)	521, 780, 837, 842
MaeIII	GTNAC	4 cut(s)	358, 400, 853, 941
MalI	GATC	2 cut(s)	549, 787
MboI	GATC	2 cut(s)	547, 785
MboII	GAAGA	7 cut(s)	57, 207, 293, 557, 716, 919, 947
MflI	RGATCY	1 cut(s)	785
MhlI	GDGCHC	1 cut(s)	733
MlsI	TGGCCA	1 cut(s)	699
MluCI	AATT	5 cut(s)	23, 245, 471, 625, 797
MluI	ACGCGT	1 cut(s)	142
MluNI	TGGCCA	1 cut(s)	699
MlyI	GAGTC	1 cut(s)	397
MnlI	CCTC	5 cut(s)	304, 557, 613, 697, 1015
Mox20I	TGGCCA	1 cut(s)	699
Mph1103I	ATGCAT	1 cut(s)	583
MroXI	GAANNNNTTC	1 cut(s)	176
MscI	TGGCCA	1 cut(s)	699
MseI	TTAA	3 cut(s)	248, 483, 738
MslI	CAYNNNNRTG	3 cut(s)	705, 950, 995
Msp20I	TGGCCA	1 cut(s)	699
MspCI	CTTAAG	1 cut(s)	737
Mva1269I	GAATGC	1 cut(s)	957
MvnI	CGCG	1 cut(s)	144
MwoI	GCNNNNNNNGC	6 cut(s)	150, 449, 458, 680, 776, 1001
NcoI	CCATGG	1 cut(s)	847
NdeII	GATC	2 cut(s)	547, 785
NheI	GCTAGC	1 cut(s)	779
NlaIII	CATG	7 cut(s)	52, 320, 608, 657, 683, 851, 918
NlaIV	GGNNCC	1 cut(s)	826
NmuCI	GTSAC	1 cut(s)	400
NsiI	ATGCAT	1 cut(s)	583
NspI	RCATGY	1 cut(s)	657
PctI	GAATGC	1 cut(s)	957
PdmI	GAANNNNTTC	1 cut(s)	176
PfeI	GAWTC	3 cut(s)	43, 212, 306
PkrI	GCNGC	4 cut(s)	460, 685, 970, 1003
PleI	GAGTC	1 cut(s)	397
PpsI	GAGTC	1 cut(s)	397
PspFI	CCCAGC	1 cut(s)	367
PspN4I	GGNNCC	1 cut(s)	826
PspPI	GGNCC	1 cut(s)	415
PsuI	RGATCY	1 cut(s)	785
RsaI	GTAC	2 cut(s)	616, 652
RsaNI	GTAC	2 cut(s)	615, 651
RseI	CAYNNNNRTG	3 cut(s)	705, 950, 995
SaqAI	TTAA	3 cut(s)	248, 483, 738
SatI	GCNGC	4 cut(s)	459, 684, 969, 1002
Sau3AI	GATC	2 cut(s)	547, 785
Sau96I	GGNCC	1 cut(s)	415
SchI	GAGTC	1 cut(s)	397
SduI	GDGCHC	1 cut(s)	733
SfaNI	GCATC	4 cut(s)	85, 422, 568, 766
SfcI	CTRYAG	1 cut(s)	372
SinI	GGWCC	1 cut(s)	415
SmiMI	CAYNNNNRTG	3 cut(s)	705, 950, 995
SmlI	CTYRAG	2 cut(s)	295, 737
SmoI	CTYRAG	2 cut(s)	295, 737
Sse9I	AATT	5 cut(s)	23, 245, 471, 625, 797
SsiI	CCGC	2 cut(s)	82, 783
SspMI	CTAG	4 cut(s)	521, 780, 837, 842
StyI	CCWWGG	2 cut(s)	418, 847
TaaI	ACNGT	4 cut(s)	364, 376, 530, 650
TaqI	TCGA	2 cut(s)	259, 304
TasI	AATT	5 cut(s)	23, 245, 471, 625, 797
TfiI	GAWTC	3 cut(s)	43, 212, 306
Tru1I	TTAA	3 cut(s)	248, 483, 738
Tru9I	TTAA	3 cut(s)	248, 483, 738
TscAI	CASTG	3 cut(s)	381, 700, 1021
TseFI	GTSAC	1 cut(s)	400
TseI	GCWGC	4 cut(s)	458, 683, 968, 1001
Tsp45I	GTSAC	1 cut(s)	400
TspDTI	ATGAA	4 cut(s)	294, 333, 366, 580
TspRI	CASTG	3 cut(s)	381, 700, 1021
Vha464I	CTTAAG	1 cut(s)	737
VneI	GTGCAC	1 cut(s)	729
VpaK11BI	GGWCC	1 cut(s)	415
XapI	RAATTY	1 cut(s)	23
XceI	RCATGY	1 cut(s)	657
XcmI	CCANNNNNNNNNTGG	1 cut(s)	425
XmiI	GTMKAC	1 cut(s)	147
XmnI	GAANNNNTTC	1 cut(s)	176
XspI	CTAG	4 cut(s)	521, 780, 837, 842
Zsp2I	ATGCAT	1 cut(s)	583

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.