Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000141

Physical Location & Seq

Genomic Coordinates Forward (+)

6501978 .. 6503106

Gene Structure 1129 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ42409

Sequence Viewer

CDS Protein Promoter (2k)

Length: 981 bp

ATGTTGGGGGCATGGTCTTCGGAAGCCACTTCTCGTAGTCTCCAAGATGCATTAGCTTATGGAAGGTATGAGCAATGGATAGCTCGTTATGGACGTGTATATAATGATATCAAGGAGAAGGAGGACCGCTTCAAGGTATTCAAGGAGAATGAGGCATTCATAGAATCTTCCAACAACAATGGAAACAAAATTTACAAATTGAGTCTGAACCAATTTGCAGACCTTACAAATAAAGAGTTCACTGCCTCAAGAAATCGATTCAAGGCGCATGAATGTTCCACAAAGACGAAGACCAGTACTTTTAAGTATGAAAATGCTACTGTGCCAACTACAATGGACTGGAGAAAGAAGGGAGCTGTAACTCCCATCAAGGACCAAGGCCAATGTGGAAGTTGTTGGGCATTCTCGGCAGTGGGAGCTATGGAAGGAATCACTCAACTTACAACTGGTAAACTAATCTCTTTGTCTGAGCAAGAGCTTGTAGACTGTGATGTCAAAGGTGTAGACCAAGGCTGTGCAGGTGGCCTTATGGACGATGCCTTTCAGTTCGTTATTCAAAATCATGGTATTAATACCGAGGCTAATTATCCCTACACTGCTGCGGATGGTACATGCAATGCCAAGAAGGAAGCAGGTCATGCAGCCACAATAACTGGCCACGAAGATGTGCCTGCAAACAGCGAAAGTGCCCTTCTTAAGGCCGTGGCTAATCAACCTATCTCTGTTGCTATTGATGCTAGTGGATCCGACTTCCAGTTCTATTCAAGTGGTGTTTTCACAGGAACATGTGGAACGGGTCTAGACCATGGTGTTACCGCTGTTGGTTATGGTGTGAGTGCTGATGGGACAAAGTACTGGTTGGTAAAGAACTCATGGGGTGCACAATGGGGTGAAGAAGGTTACATAAGAATGCAAAGAGATGTTGCTGCACCGGAAGGTCTGTGTGGTATTGCCATGGAAGCCTCTTACCCCACTGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000323 GO:0000325 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009505 GO:0009555 GO:0009605 GO:0009607 GO:0009620 GO:0009626 GO:0009791 GO:0009908 GO:0009987 GO:0010623 GO:0012501 GO:0012505 GO:0016787 GO:0019538 GO:0022414 GO:0030154 GO:0030163 GO:0030312 GO:0032501 GO:0032502 GO:0033554 GO:0034050 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048468 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050832 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0070011 GO:0071704 GO:0071944 GO:0090567 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I29 Peptidase_C1

Protein Analysis

326

Amino Acids

35.36

Weight (kDa)

5.27

Isoelectric Point (pI)

16.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I29	PF08246	23 - 80	2.2e-16	Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1	PF00112	108 - 325	3.5e-85	Papain family cysteine protease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22160
fragaria_vesca	FvH4_1g23580 FvH4_1g25982 FvH4_2g17070 FvH4_3g40500 FvH4_6g27180 FvH4_6g27320 FvH4_6g33300 FvH4_6g33310 FvH4_7g09480 FvH4_7g13000 FvH4_7g13320 FvH4_7g13600
malus_domestica	MD00G1208000.v1.1 MD09G1238200.v1.1 MD09G1238600.v1.1 MD09G1238800.v1.1 MD09G1239100.v1.1 MD16G1226900.v1.1 MD16G1242700.v1.1 MD16G1244200.v1.1 MD16G1245500.v1.1 MD16G1245800.v1.1 MD17G1231600.v1.1 MD17G1231700.v1.1 MD17G1231800.v1.1 MD17G1232200.v1.1 MD17G1232300.v1.1 MD17G1232400.v1.1
prunus_persica	Prupe.1G072300_v2.0.a1 Prupe.1G072400_v2.0.a1 Prupe.3G106300_v2.0.a1 Prupe.3G106400_v2.0.a1 Prupe.3G119400_v2.0.a1 Prupe.3G120600_v2.0.a1 Prupe.3G121900_v2.0.a1 Prupe.3G122000_v2.0.a1 Prupe.3G122100_v2.0.a1 Prupe.3G122200_v2.0.a1 Prupe.3G122700_v2.0.a1 Prupe.5G055900_v2.0.a1 Prupe.5G056500_v2.0.a1
pyrus_communis	pycom09g15770 pycom09g15780 pycom09g15790 pycom16g20640 pycom17g18390
rosa_chinensis	RchiOBHm_Chr1g0352141 RchiOBHm_Chr1g0352581 RchiOBHm_Chr1g0352601 RchiOBHm_Chr1g0352621 RchiOBHm_Chr1g0352631 RchiOBHm_Chr2g0119131 RchiOBHm_Chr2g0128691 RchiOBHm_Chr2g0128701 RchiOBHm_Chr2g0129151 RchiOBHm_Chr2g0129221 RchiOBHm_Chr2g0129401 RchiOBHm_Chr2g0129421 RchiOBHm_Chr2g0129431 RchiOBHm_Chr2g0129471 RchiOBHm_Chr2g0129481 RchiOBHm_Chr2g0129491 RchiOBHm_Chr2g0143051 RchiOBHm_Chr2g0143121 RchiOBHm_Chr2g0143171 RchiOBHm_Chr3g0457341 RchiOBHm_Chr5g0049011 RchiOBHm_Chr6g0281281 RchiOBHm_Chr6g0281311
rosa_laevigata	RLG00000012975 RLG00000012976 RLG00000012979 RLG00000018447 RLG00000019018 RLG00000019061 RLG00000019066 RLG00000019078 RLG00000019079 RLG00000019080 RLG00000019083 RLG00000019085 RLG00000020009 RLG00000020010 RLG00000025234 RLG00000028326 RLG00000028327 RLG00000028328 RLG00000028329 RLG00000028357 RLG00000031784
rosa_multiflora	Rmu_co8169188.1_g000001 Rmu_co8261007.1_g000001 Rmu_co8314361.1_g000001 Rmu_sc0000109.1_g000014 Rmu_sc0000638.1_g000020 Rmu_sc0000847.1_g000020 Rmu_sc0000847.1_g000028 Rmu_sc0000847.1_g000037 Rmu_sc0000847.1_g000046 Rmu_sc0000911.1_g000034 Rmu_sc0000999.1_g000021 Rmu_sc0001171.1_g000013 Rmu_sc0001171.1_g000018 Rmu_sc0001171.1_g000019 Rmu_sc0001653.1_g000004 Rmu_sc0002277.1_g000005 Rmu_sc0003479.1_g000001 Rmu_sc0005118.1_g000006 Rmu_sc0005118.1_g000008 Rmu_sc0005227.1_g000012 Rmu_sc0005442.1_g000010 Rmu_sc0005514.1_g000005 Rmu_sc0005996.1_g000014 Rmu_sc0008800.1_g000002 Rmu_sc0008800.1_g000010 Rmu_sc0008800.1_g000014
rosa_roxburghii	Rroxscaffold_1G00065560 Rroxscaffold_2G00102080 Rroxscaffold_2G00102090 Rroxscaffold_2G00102110 Rroxscaffold_2G00114560 Rroxscaffold_2G00114570 Rroxscaffold_2G00114610 Rroxscaffold_2G00114620 Rroxscaffold_2G00114640 Rroxscaffold_2G00114740 Rroxscaffold_2G00114790 Rroxscaffold_2G00115860 Rroxscaffold_2G00124490 Rroxscaffold_4G00302260 Rroxscaffold_4G00302530 Rroxscaffold_4G00302550 Rroxscaffold_4G00302560 Rroxscaffold_4G00302620 Rroxscaffold_6G00421980 Rroxscaffold_7G00187140 Rroxscaffold_7G00187170
rosa_rugosa	Rorug01G0225000 Rorug01G0230200 Rorug02G0220500 Rorug02G0280000 Rorug02G0285200 Rorug02G0285400 Rorug02G0286300 Rorug02G0286300 Rorug02G0286400 Rorug02G0286900 Rorug02G0377800 Rorug02G0377900 Rorug02G0378000 Rorug02G0378000 Rorug02G0378800 Rorug03G0019800 Rorug04G0452700 Rorug06G0140300 Rorug06G0140500 Rorug06G0140600
rosa_samantha	Rh1CG223600 Rh1CG227200 Rh1CG227500 Rh1CG227600 Rh2BG341200 Rh2BG345300 Rh2BG440200 Rh2DG284500 Rh2DG357900 Rh2DG362100 Rh2DG362600 Rh2DG364500 Rh2DG364600 Rh2DG364700 Rh2DG364800 Rh2DG364900 Rh2DG365000 Rh2DG365400 Rh2DG450400 Rh3AG080000 Rh3BG081900 Rh5AG322100 Rh5BG079800 Rh6AG252100 Rh6BG255600
rosa_wichuraiana	Rw1G020770 Rw1G021290 Rw2G022120 Rw2G026940 Rw2G027360 Rw2G027370 Rw2G027950 Rw2G027960 Rw2G027970 Rw2G035220 Rw3G006890 Rw6G021900 Rw6G021930 Rw6G021950 Rw6G021970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	509
AasI	GACNNNNNNGTC	1 cut(s)	491
Acc36I	ACCTGC	2 cut(s)	509, 623
AccI	GTMKAC	2 cut(s)	483, 504
AciI	CCGC	3 cut(s)	127, 602, 816
AclWI	GGATC	2 cut(s)	738, 751
AcoI	YGGCCR	1 cut(s)	655
AcsI	RAATTY	1 cut(s)	189
AfaI	GTAC	3 cut(s)	298, 610, 854
AfiI	CCNNNNNNNGG	2 cut(s)	133, 697
AflII	CTTAAG	1 cut(s)	695
AflIII	ACRYGT	2 cut(s)	94, 785
AgsI	TTSAA	5 cut(s)	133, 142, 262, 557, 765
AjiI	CACGTC	1 cut(s)	95
AluBI	AGCT	5 cut(s)	56, 83, 356, 419, 478
AluI	AGCT	5 cut(s)	56, 83, 356, 419, 478
Alw21I	GWGCWC	1 cut(s)	883
Alw26I	GTCTC	1 cut(s)	44
Alw44I	GTGCAC	1 cut(s)	879
AlwI	GGATC	2 cut(s)	738, 751
AoxI	GGCC	4 cut(s)	379, 523, 655, 699
ApaLI	GTGCAC	1 cut(s)	879
ApeKI	GCWGC	3 cut(s)	599, 641, 926
ApoI	RAATTY	1 cut(s)	189
AseI	ATTAAT	1 cut(s)	570
AspLEI	GCGC	1 cut(s)	268
AspS9I	GGNCC	2 cut(s)	124, 373
AsuHPI	GGTGA	1 cut(s)	902
AvaII	GGWCC	2 cut(s)	124, 373
BaeGI	GKGCMC	2 cut(s)	691, 883
BalI	TGGCCA	1 cut(s)	657
BamHI	GGATCC	1 cut(s)	743
BbsI	GAAGAC	2 cut(s)	9, 296
Bbv12I	GWGCWC	1 cut(s)	883
BbvI	GCAGC	3 cut(s)	586, 653, 913
BccI	CCATC	3 cut(s)	374, 599, 836
BceAI	ACGGC	1 cut(s)	686
BcgI	CGANNNNNNTGC	1 cut(s)	34
BcoDI	GTCTC	1 cut(s)	44
BfaI	CTAG	2 cut(s)	738, 800
BfrI	CTTAAG	1 cut(s)	695
BfuAI	ACCTGC	2 cut(s)	509, 623
BisI	GCNGC	3 cut(s)	600, 642, 927
BlsI	GCNGC	3 cut(s)	601, 643, 928
BmcAI	AGTACT	2 cut(s)	298, 854
Bme18I	GGWCC	2 cut(s)	124, 373
BmgBI	CACGTC	1 cut(s)	95
BmgT120I	GGNCC	2 cut(s)	124, 373
BmiI	GGNNCC	1 cut(s)	745
BmsI	GCATC	3 cut(s)	37, 526, 724
BpiI	GAAGAC	2 cut(s)	9, 296
BpmI	CTGGAG	1 cut(s)	361
BpuEI	CTTGAG	1 cut(s)	232
Bsa29I	ATCGAT	1 cut(s)	256
BsaJI	CCNNGG	6 cut(s)	376, 508, 576, 702, 805, 954
BsaWI	WCCGGW	1 cut(s)	931
Bsc4I	CCNNNNNNNGG	2 cut(s)	133, 697
Bse1I	ACTGG	6 cut(s)	294, 344, 451, 658, 754, 860
Bse3DI	GCAATG	2 cut(s)	80, 622
BseCI	ATCGAT	1 cut(s)	256
BseDI	CCNNGG	6 cut(s)	376, 508, 576, 702, 805, 954
BseGI	GGATG	1 cut(s)	610
BseLI	CCNNNNNNNGG	2 cut(s)	133, 697
BseMI	GCAATG	2 cut(s)	80, 622
BseMII	CTCAG	1 cut(s)	459
BseNI	ACTGG	6 cut(s)	294, 344, 451, 658, 754, 860
BseSI	GKGCMC	2 cut(s)	691, 883
BseXI	GCAGC	3 cut(s)	586, 653, 913
BsgI	GTGCAG	2 cut(s)	537, 912
BshFI	GGCC	4 cut(s)	381, 525, 657, 701
BshVI	ATCGAT	1 cut(s)	256
BsiHKAI	GWGCWC	1 cut(s)	883
BsiSI	CCGG	1 cut(s)	932
BslFI	GGGAC	1 cut(s)	859
BslI	CCNNNNNNNGG	2 cut(s)	133, 697
BsmAI	GTCTC	1 cut(s)	44
BsmFI	GGGAC	1 cut(s)	859
BsmI	GAATGC	3 cut(s)	155, 401, 915
BsnI	GGCC	4 cut(s)	381, 525, 657, 701
Bsp1286I	GDGCHC	2 cut(s)	691, 883
Bsp143I	GATC	1 cut(s)	743
Bsp19I	CCATGG	2 cut(s)	805, 954
BspACI	CCGC	3 cut(s)	127, 602, 816
BspANI	GGCC	4 cut(s)	381, 525, 657, 701
BspCNI	CTCAG	1 cut(s)	460
BspDI	ATCGAT	1 cut(s)	256
BspLI	GGNNCC	1 cut(s)	745
BspMI	ACCTGC	2 cut(s)	509, 623
BspPI	GGATC	2 cut(s)	738, 751
BspTI	CTTAAG	1 cut(s)	695
BsrDI	GCAATG	2 cut(s)	80, 622
BsrI	ACTGG	6 cut(s)	294, 344, 451, 658, 754, 860
BssECI	CCNNGG	6 cut(s)	376, 508, 576, 702, 805, 954
BssMI	GATC	1 cut(s)	743
BssT1I	CCWWGG	4 cut(s)	376, 508, 805, 954
Bst4CI	ACNGT	2 cut(s)	322, 488
BstAFI	CTTAAG	1 cut(s)	695
BstAPI	GCANNNNNTGC	1 cut(s)	638
BstC8I	GCNNGC	1 cut(s)	672
BstDEI	CTNAG	1 cut(s)	468
BstDSI	CCRYGG	3 cut(s)	702, 805, 954
BstENI	CCTNNNNNAGG	1 cut(s)	695
BstF5I	GGATG	1 cut(s)	610
BstHHI	GCGC	1 cut(s)	268
BstKTI	GATC	1 cut(s)	746
BstMAI	GTCTC	1 cut(s)	44
BstMBI	GATC	1 cut(s)	743
BstMWI	GCNNNNNNNGC	5 cut(s)	407, 416, 638, 734, 959
BstNSI	RCATGY	2 cut(s)	615, 789
BstSLI	GKGCMC	2 cut(s)	691, 883
BstV1I	GCAGC	3 cut(s)	586, 653, 913
BstV2I	GAAGAC	2 cut(s)	9, 296
BstX2I	RGATCY	1 cut(s)	743
BstYI	RGATCY	1 cut(s)	743
Bsu15I	ATCGAT	1 cut(s)	256
BsuRI	GGCC	4 cut(s)	381, 525, 657, 701
BsuTUI	ATCGAT	1 cut(s)	256
BtgI	CCRYGG	3 cut(s)	702, 805, 954
BtrI	CACGTC	1 cut(s)	95
BtsCI	GGATG	1 cut(s)	610
BtsI	GCAGTG	4 cut(s)	240, 417, 594, 972
BtsIMutI	CAGTG	4 cut(s)	240, 417, 594, 972
BveI	ACCTGC	2 cut(s)	509, 623
Cac8I	GCNNGC	1 cut(s)	672
CfoI	GCGC	1 cut(s)	268
Cfr13I	GGNCC	2 cut(s)	124, 373
ClaI	ATCGAT	1 cut(s)	256
Csp6I	GTAC	3 cut(s)	297, 609, 853
CviAII	CATG	9 cut(s)	12, 269, 563, 612, 638, 786, 806, 873, 955
CviQI	GTAC	3 cut(s)	297, 609, 853
DdeI	CTNAG	1 cut(s)	468
DpnI	GATC	1 cut(s)	745
DpnII	GATC	1 cut(s)	743
DrdI	GACNNNNNNGTC	1 cut(s)	491
DseDI	GACNNNNNNGTC	1 cut(s)	491
EaeI	YGGCCR	1 cut(s)	655
Eco130I	CCWWGG	4 cut(s)	376, 508, 805, 954
Eco32I	GATATC	1 cut(s)	109
Eco47I	GGWCC	2 cut(s)	124, 373
EcoNI	CCTNNNNNAGG	1 cut(s)	695
EcoRV	GATATC	1 cut(s)	109
EcoT14I	CCWWGG	4 cut(s)	376, 508, 805, 954
EcoT22I	ATGCAT	1 cut(s)	52
ErhI	CCWWGG	4 cut(s)	376, 508, 805, 954
FaeI	CATG	9 cut(s)	15, 272, 566, 615, 641, 789, 809, 876, 958
FaqI	GGGAC	1 cut(s)	859
FatI	CATG	9 cut(s)	11, 268, 562, 611, 637, 785, 805, 872, 954
FblI	GTMKAC	2 cut(s)	483, 504
Fnu4HI	GCNGC	3 cut(s)	600, 642, 927
FokI	GGATG	1 cut(s)	617
Fsp4HI	GCNGC	3 cut(s)	600, 642, 927
FspBI	CTAG	2 cut(s)	738, 800
GlaI	GCGC	1 cut(s)	267
GluI	GCNGC	3 cut(s)	600, 642, 927
GsuI	CTGGAG	1 cut(s)	361
HaeIII	GGCC	4 cut(s)	381, 525, 657, 701
HapII	CCGG	1 cut(s)	932
HhaI	GCGC	1 cut(s)	268
Hin1II	CATG	9 cut(s)	15, 272, 566, 615, 641, 789, 809, 876, 958
Hin6I	GCGC	1 cut(s)	266
HinP1I	GCGC	1 cut(s)	266
HinfI	GANTC	4 cut(s)	164, 202, 258, 429
HpaII	CCGG	1 cut(s)	932
HphI	GGTGA	1 cut(s)	902
Hpy166II	GTNNAC	5 cut(s)	240, 452, 484, 505, 881
Hpy188I	TCNGA	4 cut(s)	22, 207, 469, 748
Hpy188III	TCNNGA	2 cut(s)	249, 800
Hpy8I	GTNNAC	5 cut(s)	240, 452, 484, 505, 881
HpyAV	CCTTC	8 cut(s)	57, 112, 343, 419, 619, 701, 890, 929
HpyCH4III	ACNGT	2 cut(s)	322, 488
HpyCH4IV	ACGT	1 cut(s)	94
HpyCH4V	TGCA	9 cut(s)	50, 218, 518, 615, 641, 674, 881, 913, 929
HpyF10VI	GCNNNNNNNGC	5 cut(s)	407, 416, 638, 734, 959
HpyF3I	CTNAG	1 cut(s)	468
HpySE526I	ACGT	1 cut(s)	94
Hsp92II	CATG	9 cut(s)	15, 272, 566, 615, 641, 789, 809, 876, 958
HspAI	GCGC	1 cut(s)	266
Kzo9I	GATC	1 cut(s)	743
LmnI	GCTCC	2 cut(s)	353, 416
Lsp1109I	GCAGC	3 cut(s)	586, 653, 913
LweI	GCATC	3 cut(s)	37, 526, 724
MaeI	CTAG	2 cut(s)	738, 800
MaeII	ACGT	1 cut(s)	94
MaeIII	GTNAC	3 cut(s)	358, 811, 899
MalI	GATC	1 cut(s)	745
MboI	GATC	1 cut(s)	743
MboII	GAAGA	5 cut(s)	9, 159, 301, 674, 905
MflI	RGATCY	1 cut(s)	743
MhlI	GDGCHC	2 cut(s)	691, 883
MlsI	TGGCCA	1 cut(s)	657
MluCI	AATT	4 cut(s)	189, 197, 212, 583
MluNI	TGGCCA	1 cut(s)	657
MlyI	GAGTC	1 cut(s)	211
MmeI	TCCRAC	2 cut(s)	195, 771
MnlI	CCTC	5 cut(s)	115, 145, 256, 571, 973
Mox20I	TGGCCA	1 cut(s)	657
Mph1103I	ATGCAT	1 cut(s)	52
MscI	TGGCCA	1 cut(s)	657
MseI	TTAA	3 cut(s)	303, 570, 696
MslI	CAYNNNNRTG	2 cut(s)	663, 908
Msp20I	TGGCCA	1 cut(s)	657
MspA1I	CMGCKG	1 cut(s)	818
MspCI	CTTAAG	1 cut(s)	695
MspI	CCGG	1 cut(s)	932
Mva1269I	GAATGC	3 cut(s)	155, 401, 915
MwoI	GCNNNNNNNGC	5 cut(s)	407, 416, 638, 734, 959
NcoI	CCATGG	2 cut(s)	805, 954
NdeII	GATC	1 cut(s)	743
NlaIII	CATG	9 cut(s)	15, 272, 566, 615, 641, 789, 809, 876, 958
NlaIV	GGNNCC	1 cut(s)	745
NmeAIII	GCCGAG	1 cut(s)	386
NsiI	ATGCAT	1 cut(s)	52
NspI	RCATGY	2 cut(s)	615, 789
PaqCI	CACCTGC	1 cut(s)	509
PciI	ACATGT	1 cut(s)	785
PcsI	WCGNNNNNNNCGW	1 cut(s)	91
PctI	GAATGC	3 cut(s)	155, 401, 915
PfeI	GAWTC	3 cut(s)	164, 258, 429
PkrI	GCNGC	3 cut(s)	601, 643, 928
PleI	GAGTC	1 cut(s)	210
PpsI	GAGTC	1 cut(s)	210
PscI	ACATGT	1 cut(s)	785
PshBI	ATTAAT	1 cut(s)	570
PspN4I	GGNNCC	1 cut(s)	745
PspPI	GGNCC	2 cut(s)	124, 373
PsuI	RGATCY	1 cut(s)	743
RsaI	GTAC	3 cut(s)	298, 610, 854
RsaNI	GTAC	3 cut(s)	297, 609, 853
RseI	CAYNNNNRTG	2 cut(s)	663, 908
SaqAI	TTAA	3 cut(s)	303, 570, 696
SatI	GCNGC	3 cut(s)	600, 642, 927
Sau3AI	GATC	1 cut(s)	743
Sau96I	GGNCC	2 cut(s)	124, 373
ScaI	AGTACT	2 cut(s)	298, 854
SchI	GAGTC	1 cut(s)	211
SduI	GDGCHC	2 cut(s)	691, 883
SfaNI	GCATC	3 cut(s)	37, 526, 724
SinI	GGWCC	2 cut(s)	124, 373
SmiMI	CAYNNNNRTG	2 cut(s)	663, 908
SmlI	CTYRAG	2 cut(s)	247, 695
SmoI	CTYRAG	2 cut(s)	247, 695
Sse9I	AATT	4 cut(s)	189, 197, 212, 583
SsiI	CCGC	3 cut(s)	127, 602, 816
SspMI	CTAG	2 cut(s)	738, 800
StyI	CCWWGG	4 cut(s)	376, 508, 805, 954
TaaI	ACNGT	2 cut(s)	322, 488
TaiI	ACGT	1 cut(s)	97
TaqI	TCGA	1 cut(s)	256
TasI	AATT	4 cut(s)	189, 197, 212, 583
TatI	WGTACW	2 cut(s)	296, 852
TfiI	GAWTC	3 cut(s)	164, 258, 429
Tru1I	TTAA	3 cut(s)	303, 570, 696
Tru9I	TTAA	3 cut(s)	303, 570, 696
TscAI	CASTG	4 cut(s)	247, 417, 601, 979
TseI	GCWGC	3 cut(s)	599, 641, 926
TspDTI	ATGAA	3 cut(s)	148, 285, 324
TspRI	CASTG	4 cut(s)	247, 417, 601, 979
Vha464I	CTTAAG	1 cut(s)	695
VneI	GTGCAC	1 cut(s)	879
VpaK11BI	GGWCC	2 cut(s)	124, 373
VspI	ATTAAT	1 cut(s)	570
XagI	CCTNNNNNAGG	1 cut(s)	695
XapI	RAATTY	1 cut(s)	189
XbaI	TCTAGA	1 cut(s)	799
XceI	RCATGY	2 cut(s)	615, 789
XcmI	CCANNNNNNNNNTGG	1 cut(s)	383
XmiI	GTMKAC	2 cut(s)	483, 504
XspI	CTAG	2 cut(s)	738, 800
ZrmI	AGTACT	2 cut(s)	298, 854
Zsp2I	ATGCAT	1 cut(s)	52

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.