Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000141

Physical Location & Seq

Genomic Coordinates Forward (+)

24106200 .. 24107182

Gene Structure 983 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00102080.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 855 bp

ATGGAGTTCACCAACCTCGGAAAATGTCTATGTTTCGCTTTGATCCTCTTGATATGTCGAGCTTGGTCTTCTGAAGCCACTTCTCGCACACTCCAAGATGCATCAATGTATGGGAGATATGAGCAATGGATGGCTGGTTATGGACGTGTCTATGAAGAGATCAACGAGAAGGAGAAGCGCTTCCAAATATTTAAGGAAAATGTAGCATTTGTAGAATTATCCAACAATGATGCAAGCAAACCTTACAAATTAAGTGTCAATCAATTTGCAGACCTTACAAATGAAGAATTCATTGCTTTGAGAAATCGATTCAAGGGGCATGAATGTTCCACAAAGACCACTTCTTTCAAGTATGAAAACGTTACTGTGCCAGCTACTGTGGACTGGAGACAGAAAGGAGCTGTAACCCCAATCAAGGACCAAGGCCAATGTGGATGCTGTTGGGCATTTTCAGCAGTGGCAGCCATGGAAGGAATCACTCAACTTACTACAGGTAAACTTATCTCTTTGTCCGAGCAAGAGCTGGTTGACTGTGATGTGAATGGTGAAGACCAAGGTTGTGAGGGTGGCTTGATGGACAATGCCTTTGAGTTCATCAATCAAAATCATGGACTTAATACTGAGGCTAATTACCCCTATACTGGTGTTGATGGTACATGCAATGCCCAGAAGGAAGCAAGCCATGCAGCCTCGATAACTGGTCATGAAGATGTGCCTGCAAATAGTGAAAGTGCCCTTCTTAAGGCTGTAGCTAATCAACCCATTTCCGTTGCCATTGATGCTAGTGGTTCTGATTTCCAATTCTATTCAAGATTTCAAGTGGTGTTTTCACAGGAACTTGTGGAACAAGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000323 GO:0000325 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009505 GO:0009555 GO:0009605 GO:0009607 GO:0009620 GO:0009626 GO:0009791 GO:0009908 GO:0009987 GO:0010623 GO:0012501 GO:0012505 GO:0016787 GO:0019538 GO:0022414 GO:0030154 GO:0030163 GO:0030312 GO:0032501 GO:0032502 GO:0033554 GO:0034050 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048468 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050832 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0070011 GO:0071704 GO:0071944 GO:0090567 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I29 Peptidase_C1

Protein Analysis

284

Amino Acids

31.47

Weight (kDa)

4.71

Isoelectric Point (pI)

24.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I29	PF08246	40 - 97	6.9e-19	Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1	PF00112	123 - 271	1e-54	Papain family cysteine protease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22160
fragaria_vesca	FvH4_1g23580 FvH4_1g25982 FvH4_2g17070 FvH4_3g40500 FvH4_6g27180 FvH4_6g27320 FvH4_6g33300 FvH4_6g33310 FvH4_7g09480 FvH4_7g13000 FvH4_7g13320 FvH4_7g13600
malus_domestica	MD00G1208000.v1.1 MD09G1238200.v1.1 MD09G1238600.v1.1 MD09G1238800.v1.1 MD09G1239100.v1.1 MD16G1226900.v1.1 MD16G1242700.v1.1 MD16G1244200.v1.1 MD16G1245500.v1.1 MD16G1245800.v1.1 MD17G1231600.v1.1 MD17G1231700.v1.1 MD17G1231800.v1.1 MD17G1232200.v1.1 MD17G1232300.v1.1 MD17G1232400.v1.1
prunus_persica	Prupe.1G072300_v2.0.a1 Prupe.1G072400_v2.0.a1 Prupe.3G106300_v2.0.a1 Prupe.3G106400_v2.0.a1 Prupe.3G119400_v2.0.a1 Prupe.3G120600_v2.0.a1 Prupe.3G121900_v2.0.a1 Prupe.3G122000_v2.0.a1 Prupe.3G122100_v2.0.a1 Prupe.3G122200_v2.0.a1 Prupe.3G122700_v2.0.a1 Prupe.5G055900_v2.0.a1 Prupe.5G056500_v2.0.a1
pyrus_communis	pycom09g15770 pycom09g15780 pycom09g15790 pycom16g20640 pycom17g18390
rosa_chinensis	RchiOBHm_Chr1g0352141 RchiOBHm_Chr1g0352581 RchiOBHm_Chr1g0352601 RchiOBHm_Chr1g0352621 RchiOBHm_Chr1g0352631 RchiOBHm_Chr2g0119131 RchiOBHm_Chr2g0128691 RchiOBHm_Chr2g0128701 RchiOBHm_Chr2g0129151 RchiOBHm_Chr2g0129221 RchiOBHm_Chr2g0129401 RchiOBHm_Chr2g0129421 RchiOBHm_Chr2g0129431 RchiOBHm_Chr2g0129471 RchiOBHm_Chr2g0129481 RchiOBHm_Chr2g0129491 RchiOBHm_Chr2g0143051 RchiOBHm_Chr2g0143121 RchiOBHm_Chr2g0143171 RchiOBHm_Chr3g0457341 RchiOBHm_Chr5g0049011 RchiOBHm_Chr6g0281281 RchiOBHm_Chr6g0281311
rosa_laevigata	RLG00000012975 RLG00000012976 RLG00000012979 RLG00000018447 RLG00000019018 RLG00000019061 RLG00000019066 RLG00000019078 RLG00000019079 RLG00000019080 RLG00000019083 RLG00000019085 RLG00000020009 RLG00000020010 RLG00000025234 RLG00000028326 RLG00000028327 RLG00000028328 RLG00000028329 RLG00000028357 RLG00000031784
rosa_multiflora	Rmu_co8169188.1_g000001 Rmu_co8261007.1_g000001 Rmu_co8314361.1_g000001 Rmu_sc0000109.1_g000014 Rmu_sc0000638.1_g000020 Rmu_sc0000847.1_g000020 Rmu_sc0000847.1_g000028 Rmu_sc0000847.1_g000037 Rmu_sc0000847.1_g000046 Rmu_sc0000911.1_g000034 Rmu_sc0000999.1_g000021 Rmu_sc0001171.1_g000013 Rmu_sc0001171.1_g000018 Rmu_sc0001171.1_g000019 Rmu_sc0001653.1_g000004 Rmu_sc0002277.1_g000005 Rmu_sc0003479.1_g000001 Rmu_sc0005118.1_g000006 Rmu_sc0005118.1_g000008 Rmu_sc0005227.1_g000012 Rmu_sc0005442.1_g000010 Rmu_sc0005514.1_g000005 Rmu_sc0005996.1_g000014 Rmu_sc0008800.1_g000002 Rmu_sc0008800.1_g000010 Rmu_sc0008800.1_g000014
rosa_roxburghii	Rroxscaffold_1G00065560 Rroxscaffold_2G00102080 Rroxscaffold_2G00102090 Rroxscaffold_2G00102110 Rroxscaffold_2G00114560 Rroxscaffold_2G00114570 Rroxscaffold_2G00114610 Rroxscaffold_2G00114620 Rroxscaffold_2G00114640 Rroxscaffold_2G00114740 Rroxscaffold_2G00114790 Rroxscaffold_2G00115860 Rroxscaffold_2G00124490 Rroxscaffold_4G00302260 Rroxscaffold_4G00302530 Rroxscaffold_4G00302550 Rroxscaffold_4G00302560 Rroxscaffold_4G00302620 Rroxscaffold_6G00421980 Rroxscaffold_7G00187140 Rroxscaffold_7G00187170
rosa_rugosa	Rorug01G0225000 Rorug01G0230200 Rorug02G0220500 Rorug02G0280000 Rorug02G0285200 Rorug02G0285400 Rorug02G0286300 Rorug02G0286300 Rorug02G0286400 Rorug02G0286900 Rorug02G0377800 Rorug02G0377900 Rorug02G0378000 Rorug02G0378000 Rorug02G0378800 Rorug03G0019800 Rorug04G0452700 Rorug06G0140300 Rorug06G0140500 Rorug06G0140600
rosa_samantha	Rh1CG223600 Rh1CG227200 Rh1CG227500 Rh1CG227600 Rh2BG341200 Rh2BG345300 Rh2BG440200 Rh2DG284500 Rh2DG357900 Rh2DG362100 Rh2DG362600 Rh2DG364500 Rh2DG364600 Rh2DG364700 Rh2DG364800 Rh2DG364900 Rh2DG365000 Rh2DG365400 Rh2DG450400 Rh3AG080000 Rh3BG081900 Rh5AG322100 Rh5BG079800 Rh6AG252100 Rh6BG255600
rosa_wichuraiana	Rw1G020770 Rw1G021290 Rw2G022120 Rw2G026940 Rw2G027360 Rw2G027370 Rw2G027950 Rw2G027960 Rw2G027970 Rw2G035220 Rw3G006890 Rw6G021900 Rw6G021930 Rw6G021950 Rw6G021970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AclI	AACGTT	1 cut(s)	360
AclWI	GGATC	1 cut(s)	37
AcsI	RAATTY	1 cut(s)	287
AcuI	CTGAAG	1 cut(s)	93
AfaI	GTAC	1 cut(s)	655
AfeI	AGCGCT	1 cut(s)	179
AfiI	CCNNNNNNNGG	3 cut(s)	415, 641, 742
AflII	CTTAAG	1 cut(s)	740
AflIII	ACRYGT	1 cut(s)	145
AgsI	TTSAA	4 cut(s)	313, 349, 810, 818
AjiI	CACGTC	1 cut(s)	146
AluBI	AGCT	5 cut(s)	62, 374, 401, 523, 752
AluI	AGCT	5 cut(s)	62, 374, 401, 523, 752
Alw26I	GTCTC	1 cut(s)	382
AlwI	GGATC	1 cut(s)	37
AlwNI	CAGNNNCTG	1 cut(s)	377
Aor51HI	AGCGCT	1 cut(s)	179
AoxI	GGCC	1 cut(s)	424
ApeKI	GCWGC	2 cut(s)	461, 686
ApoI	RAATTY	1 cut(s)	287
ArsI	GACNNNNNNTTYG	4 cut(s)	240, 272, 569, 601
Asp700I	GAANNNNTTC	1 cut(s)	179
AspLEI	GCGC	1 cut(s)	180
AspS9I	GGNCC	1 cut(s)	418
AsuHPI	GGTGA	1 cut(s)	557
AvaII	GGWCC	1 cut(s)	418
BaeGI	GKGCMC	1 cut(s)	736
BbsI	GAAGAC	2 cut(s)	60, 555
BbvI	GCAGC	2 cut(s)	473, 698
BccI	CCATC	3 cut(s)	124, 568, 644
BcoDI	GTCTC	1 cut(s)	382
BfaI	CTAG	2 cut(s)	783, 853
BfmI	CTRYAG	2 cut(s)	489, 747
BfoI	RGCGCY	1 cut(s)	181
BfrI	CTTAAG	1 cut(s)	740
BisI	GCNGC	2 cut(s)	462, 687
BlsI	GCNGC	2 cut(s)	463, 688
Bme18I	GGWCC	1 cut(s)	418
BmgBI	CACGTC	1 cut(s)	146
BmgT120I	GGNCC	1 cut(s)	418
BmsI	GCATC	5 cut(s)	88, 110, 220, 425, 769
BpiI	GAAGAC	2 cut(s)	60, 555
BpmI	CTGGAG	1 cut(s)	406
Bsa29I	ATCGAT	1 cut(s)	307
BsaJI	CCNNGG	4 cut(s)	16, 421, 465, 553
Bsc4I	CCNNNNNNNGG	3 cut(s)	415, 641, 742
Bse1I	ACTGG	3 cut(s)	389, 646, 703
Bse3DI	GCAATG	3 cut(s)	131, 291, 667
BseCI	ATCGAT	1 cut(s)	307
BseDI	CCNNGG	4 cut(s)	16, 421, 465, 553
BseGI	GGATG	2 cut(s)	135, 440
BseLI	CCNNNNNNNGG	3 cut(s)	415, 641, 742
BseMI	GCAATG	3 cut(s)	131, 291, 667
BseMII	CTCAG	1 cut(s)	612
BseNI	ACTGG	3 cut(s)	389, 646, 703
BseSI	GKGCMC	1 cut(s)	736
BseXI	GCAGC	2 cut(s)	473, 698
BshFI	GGCC	1 cut(s)	426
BshVI	ATCGAT	1 cut(s)	307
BslI	CCNNNNNNNGG	3 cut(s)	415, 641, 742
BsmAI	GTCTC	1 cut(s)	382
BsnI	GGCC	1 cut(s)	426
Bsp1286I	GDGCHC	1 cut(s)	736
Bsp143I	GATC	2 cut(s)	42, 159
Bsp19I	CCATGG	1 cut(s)	465
BspANI	GGCC	1 cut(s)	426
BspCNI	CTCAG	1 cut(s)	613
BspDI	ATCGAT	1 cut(s)	307
BspHI	TCATGA	1 cut(s)	703
BspPI	GGATC	1 cut(s)	37
BspTI	CTTAAG	1 cut(s)	740
BsrDI	GCAATG	3 cut(s)	131, 291, 667
BsrI	ACTGG	3 cut(s)	389, 646, 703
BssECI	CCNNGG	4 cut(s)	16, 421, 465, 553
BssMI	GATC	2 cut(s)	42, 159
BssT1I	CCWWGG	3 cut(s)	421, 465, 553
Bst4CI	ACNGT	3 cut(s)	367, 379, 533
Bst6I	CTCTTC	1 cut(s)	150
BstAFI	CTTAAG	1 cut(s)	740
BstAPI	GCANNNNNTGC	1 cut(s)	683
BstC8I	GCNNGC	4 cut(s)	235, 372, 679, 717
BstDEI	CTNAG	1 cut(s)	621
BstDSI	CCRYGG	1 cut(s)	465
BstENI	CCTNNNNNAGG	1 cut(s)	740
BstF5I	GGATG	2 cut(s)	135, 440
BstH2I	RGCGCY	1 cut(s)	181
BstHHI	GCGC	1 cut(s)	180
BstKTI	GATC	2 cut(s)	45, 162
BstMAI	GTCTC	1 cut(s)	382
BstMBI	GATC	2 cut(s)	42, 159
BstMWI	GCNNNNNNNGC	4 cut(s)	452, 461, 683, 779
BstNSI	RCATGY	1 cut(s)	660
BstSFI	CTRYAG	2 cut(s)	489, 747
BstSLI	GKGCMC	1 cut(s)	736
BstV1I	GCAGC	2 cut(s)	473, 698
BstV2I	GAAGAC	2 cut(s)	60, 555
Bsu15I	ATCGAT	1 cut(s)	307
BsuRI	GGCC	1 cut(s)	426
BsuTUI	ATCGAT	1 cut(s)	307
BtgI	CCRYGG	1 cut(s)	465
BtrI	CACGTC	1 cut(s)	146
BtsCI	GGATG	2 cut(s)	135, 440
BtsI	GCAGTG	1 cut(s)	462
BtsIMutI	CAGTG	1 cut(s)	462
Cac8I	GCNNGC	4 cut(s)	235, 372, 679, 717
CaiI	CAGNNNCTG	1 cut(s)	377
CciI	TCATGA	1 cut(s)	703
CfoI	GCGC	1 cut(s)	180
Cfr13I	GGNCC	1 cut(s)	418
ClaI	ATCGAT	1 cut(s)	307
Csp6I	GTAC	1 cut(s)	654
CviAII	CATG	6 cut(s)	320, 466, 608, 657, 683, 704
CviQI	GTAC	1 cut(s)	654
DdeI	CTNAG	1 cut(s)	621
DpnI	GATC	2 cut(s)	44, 161
DpnII	GATC	2 cut(s)	42, 159
Eam1104I	CTCTTC	1 cut(s)	150
EarI	CTCTTC	1 cut(s)	150
Eco130I	CCWWGG	3 cut(s)	421, 465, 553
Eco47I	GGWCC	1 cut(s)	418
Eco47III	AGCGCT	1 cut(s)	179
Eco57I	CTGAAG	1 cut(s)	93
EcoNI	CCTNNNNNAGG	1 cut(s)	740
EcoRI	GAATTC	1 cut(s)	287
EcoT14I	CCWWGG	3 cut(s)	421, 465, 553
EcoT22I	ATGCAT	1 cut(s)	103
ErhI	CCWWGG	3 cut(s)	421, 465, 553
FaeI	CATG	6 cut(s)	323, 469, 611, 660, 686, 707
FalI	AAGNNNNNCTT	2 cut(s)	226, 258
FatI	CATG	6 cut(s)	319, 465, 607, 656, 682, 703
Fnu4HI	GCNGC	2 cut(s)	462, 687
FokI	GGATG	2 cut(s)	142, 447
Fsp4HI	GCNGC	2 cut(s)	462, 687
FspBI	CTAG	2 cut(s)	783, 853
GlaI	GCGC	1 cut(s)	179
GluI	GCNGC	2 cut(s)	462, 687
GsuI	CTGGAG	1 cut(s)	406
HaeII	RGCGCY	1 cut(s)	181
HaeIII	GGCC	1 cut(s)	426
HhaI	GCGC	1 cut(s)	180
Hin1II	CATG	6 cut(s)	323, 469, 611, 660, 686, 707
Hin6I	GCGC	1 cut(s)	178
HinP1I	GCGC	1 cut(s)	178
HincII	GTYRAC	1 cut(s)	529
HindII	GTYRAC	1 cut(s)	529
HinfI	GANTC	2 cut(s)	309, 474
HphI	GGTGA	1 cut(s)	557
Hpy166II	GTNNAC	4 cut(s)	9, 382, 497, 529
Hpy188I	TCNGA	4 cut(s)	20, 73, 514, 793
Hpy188III	TCNNGA	3 cut(s)	49, 704, 810
Hpy8I	GTNNAC	4 cut(s)	9, 382, 497, 529
HpyAV	CCTTC	4 cut(s)	163, 464, 664, 746
HpyCH4III	ACNGT	3 cut(s)	367, 379, 533
HpyCH4IV	ACGT	2 cut(s)	145, 360
HpyCH4V	TGCA	6 cut(s)	101, 233, 269, 660, 686, 719
HpyF10VI	GCNNNNNNNGC	4 cut(s)	452, 461, 683, 779
HpyF3I	CTNAG	1 cut(s)	621
HpySE526I	ACGT	2 cut(s)	145, 360
Hsp92II	CATG	6 cut(s)	323, 469, 611, 660, 686, 707
HspAI	GCGC	1 cut(s)	178
Kzo9I	GATC	2 cut(s)	42, 159
LmnI	GCTCC	1 cut(s)	398
Lsp1109I	GCAGC	2 cut(s)	473, 698
LweI	GCATC	5 cut(s)	88, 110, 220, 425, 769
MaeI	CTAG	2 cut(s)	783, 853
MaeII	ACGT	2 cut(s)	145, 360
MaeIII	GTNAC	2 cut(s)	361, 403
MalI	GATC	2 cut(s)	44, 161
MboI	GATC	2 cut(s)	42, 159
MboII	GAAGA	5 cut(s)	60, 167, 296, 560, 719
MhlI	GDGCHC	1 cut(s)	736
MluCI	AATT	6 cut(s)	215, 248, 263, 287, 628, 800
MmeI	TCCRAC	1 cut(s)	246
MnlI	CCTC	5 cut(s)	26, 56, 556, 616, 700
Mph1103I	ATGCAT	1 cut(s)	103
MroXI	GAANNNNTTC	1 cut(s)	179
MseI	TTAA	4 cut(s)	192, 251, 615, 741
MslI	CAYNNNNRTG	1 cut(s)	708
MspCI	CTTAAG	1 cut(s)	740
MwoI	GCNNNNNNNGC	4 cut(s)	452, 461, 683, 779
NcoI	CCATGG	1 cut(s)	465
NdeII	GATC	2 cut(s)	42, 159
NlaIII	CATG	6 cut(s)	323, 469, 611, 660, 686, 707
NsiI	ATGCAT	1 cut(s)	103
NspI	RCATGY	1 cut(s)	660
PagI	TCATGA	1 cut(s)	703
PdmI	GAANNNNTTC	1 cut(s)	179
PfeI	GAWTC	2 cut(s)	309, 474
PkrI	GCNGC	2 cut(s)	463, 688
Psp1406I	AACGTT	1 cut(s)	360
PspPI	GGNCC	1 cut(s)	418
PstNI	CAGNNNCTG	1 cut(s)	377
RsaI	GTAC	1 cut(s)	655
RsaNI	GTAC	1 cut(s)	654
RseI	CAYNNNNRTG	1 cut(s)	708
SaqAI	TTAA	4 cut(s)	192, 251, 615, 741
SatI	GCNGC	2 cut(s)	462, 687
Sau3AI	GATC	2 cut(s)	42, 159
Sau96I	GGNCC	1 cut(s)	418
SduI	GDGCHC	1 cut(s)	736
SfaNI	GCATC	5 cut(s)	88, 110, 220, 425, 769
SfcI	CTRYAG	2 cut(s)	489, 747
SinI	GGWCC	1 cut(s)	418
SmiMI	CAYNNNNRTG	1 cut(s)	708
SmlI	CTYRAG	1 cut(s)	740
SmoI	CTYRAG	1 cut(s)	740
Sse9I	AATT	6 cut(s)	215, 248, 263, 287, 628, 800
SspI	AATATT	1 cut(s)	189
SspMI	CTAG	2 cut(s)	783, 853
StyI	CCWWGG	3 cut(s)	421, 465, 553
TaaI	ACNGT	3 cut(s)	367, 379, 533
TaiI	ACGT	2 cut(s)	148, 363
TaqI	TCGA	3 cut(s)	58, 307, 692
TasI	AATT	6 cut(s)	215, 248, 263, 287, 628, 800
TfiI	GAWTC	2 cut(s)	309, 474
Tru1I	TTAA	4 cut(s)	192, 251, 615, 741
Tru9I	TTAA	4 cut(s)	192, 251, 615, 741
TscAI	CASTG	1 cut(s)	462
TseI	GCWGC	2 cut(s)	461, 686
TspDTI	ATGAA	7 cut(s)	168, 280, 297, 336, 369, 583, 720
TspGWI	ACGGA	1 cut(s)	757
TspRI	CASTG	1 cut(s)	462
Vha464I	CTTAAG	1 cut(s)	740
VpaK11BI	GGWCC	1 cut(s)	418
XagI	CCTNNNNNAGG	1 cut(s)	740
XapI	RAATTY	1 cut(s)	287
XceI	RCATGY	1 cut(s)	660
XcmI	CCANNNNNNNNNTGG	1 cut(s)	428
XmnI	GAANNNNTTC	1 cut(s)	179
XspI	CTAG	2 cut(s)	783, 853
Zsp2I	ATGCAT	1 cut(s)	103

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.