Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000141

Physical Location & Seq

Genomic Coordinates Forward (+)

40818445 .. 40819571

Gene Structure 1127 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00114640.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1008 bp

ATGTGCAACCGTATCTGTTTGGCCTTGATCCTCGTGCTGGGGGTTTGGTCTTCTGAGGCCACTTCTCGCAATCTCCAAGATGCATCAATGTATGGGAGGTACGAGCAATGGATGGCTCGTTACGGACGTGTCTACAATGACATGAACGAAAAGGAGGAACGCTTCAATATATTCAAGGACAATGTGGCATTTATAGAATCTTCCAATAATGCAGGAAACAAACTTTACAAATTGAGTGTGAATCAATTTGCAGACCTTACGAATGAAGAATTCACTACCGCAAGAAATCGGTTCAAGGGGCATGAGTGTTCCACAAAGACCACTACTTTCAAGTATGAAAATGCTAGCGTGCCAGCTACAATGGACTGGAGGCAGAAAGGAGCTGTAACTCCCATTAAGGACCAAGGCCAATGTGGATGTTGTTGGGCGTTCTCAGCCGTGGCAGCCATGGAAGGAATTACTCAACTTACAACTGGTAAATTGATTTCTTTGTCTGAGCAAGAACTAGTTGACTGTGATGTCAATGGTGAAGATCAAGGCTGTGAGGGTGGCTTGATGGACGATGCCTTTCAGTTCATCAATCAAAATCATGGACTCAGTACCGAAGCTAATTATCCATACACTGGTGTTGATGGTACATGCAATGCCAAGAAGGAAGCAGACCATGCAGCCTCAATCACAGGCCACGAAGATGTGCCTGCAAATAGTGAAAGTGCACTCCTTAAGGCTGTCGCTAATCAACCTATTTCTGTTGCCATTGATGCTAGTGGATCCGATTTCCAGTTCTACTCAAGTGGTGTTTTCACAGGAACCTGTGGAACTAGCCTAGACCATGGTGTTACCGCTGTTGGTTATGGTGCTAGCAATGATGGGACTAAGTACTGGCTGGTGAAGAACTCATGGGGCGAACAATGGGGCGAAGAAGGTTACATAAGGATGCAAAGAGATGTTGCTGCACCAGAAGGTCTCTGTGGCATTGCCATGGAAGCTTCCTATCCCACTGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000323 GO:0000325 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009505 GO:0009555 GO:0009605 GO:0009607 GO:0009620 GO:0009626 GO:0009791 GO:0009908 GO:0009987 GO:0010623 GO:0012501 GO:0012505 GO:0016787 GO:0019538 GO:0022414 GO:0030154 GO:0030163 GO:0030312 GO:0032501 GO:0032502 GO:0033554 GO:0034050 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048468 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050832 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0070011 GO:0071704 GO:0071944 GO:0090567 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I29 Peptidase_C1

Protein Analysis

335

Amino Acids

36.59

Weight (kDa)

4.7

Isoelectric Point (pI)

23.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I29	PF08246	34 - 91	3e-19	Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1	PF00112	117 - 334	4.2e-85	Papain family cysteine protease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22160
fragaria_vesca	FvH4_1g23580 FvH4_1g25982 FvH4_2g17070 FvH4_3g40500 FvH4_6g27180 FvH4_6g27320 FvH4_6g33300 FvH4_6g33310 FvH4_7g09480 FvH4_7g13000 FvH4_7g13320 FvH4_7g13600
malus_domestica	MD00G1208000.v1.1 MD09G1238200.v1.1 MD09G1238600.v1.1 MD09G1238800.v1.1 MD09G1239100.v1.1 MD16G1226900.v1.1 MD16G1242700.v1.1 MD16G1244200.v1.1 MD16G1245500.v1.1 MD16G1245800.v1.1 MD17G1231600.v1.1 MD17G1231700.v1.1 MD17G1231800.v1.1 MD17G1232200.v1.1 MD17G1232300.v1.1 MD17G1232400.v1.1
prunus_persica	Prupe.1G072300_v2.0.a1 Prupe.1G072400_v2.0.a1 Prupe.3G106300_v2.0.a1 Prupe.3G106400_v2.0.a1 Prupe.3G119400_v2.0.a1 Prupe.3G120600_v2.0.a1 Prupe.3G121900_v2.0.a1 Prupe.3G122000_v2.0.a1 Prupe.3G122100_v2.0.a1 Prupe.3G122200_v2.0.a1 Prupe.3G122700_v2.0.a1 Prupe.5G055900_v2.0.a1 Prupe.5G056500_v2.0.a1
pyrus_communis	pycom09g15770 pycom09g15780 pycom09g15790 pycom16g20640 pycom17g18390
rosa_chinensis	RchiOBHm_Chr1g0352141 RchiOBHm_Chr1g0352581 RchiOBHm_Chr1g0352601 RchiOBHm_Chr1g0352621 RchiOBHm_Chr1g0352631 RchiOBHm_Chr2g0119131 RchiOBHm_Chr2g0128691 RchiOBHm_Chr2g0128701 RchiOBHm_Chr2g0129151 RchiOBHm_Chr2g0129221 RchiOBHm_Chr2g0129401 RchiOBHm_Chr2g0129421 RchiOBHm_Chr2g0129431 RchiOBHm_Chr2g0129471 RchiOBHm_Chr2g0129481 RchiOBHm_Chr2g0129491 RchiOBHm_Chr2g0143051 RchiOBHm_Chr2g0143121 RchiOBHm_Chr2g0143171 RchiOBHm_Chr3g0457341 RchiOBHm_Chr5g0049011 RchiOBHm_Chr6g0281281 RchiOBHm_Chr6g0281311
rosa_laevigata	RLG00000012975 RLG00000012976 RLG00000012979 RLG00000018447 RLG00000019018 RLG00000019061 RLG00000019066 RLG00000019078 RLG00000019079 RLG00000019080 RLG00000019083 RLG00000019085 RLG00000020009 RLG00000020010 RLG00000025234 RLG00000028326 RLG00000028327 RLG00000028328 RLG00000028329 RLG00000028357 RLG00000031784
rosa_multiflora	Rmu_co8169188.1_g000001 Rmu_co8261007.1_g000001 Rmu_co8314361.1_g000001 Rmu_sc0000109.1_g000014 Rmu_sc0000638.1_g000020 Rmu_sc0000847.1_g000020 Rmu_sc0000847.1_g000028 Rmu_sc0000847.1_g000037 Rmu_sc0000847.1_g000046 Rmu_sc0000911.1_g000034 Rmu_sc0000999.1_g000021 Rmu_sc0001171.1_g000013 Rmu_sc0001171.1_g000018 Rmu_sc0001171.1_g000019 Rmu_sc0001653.1_g000004 Rmu_sc0002277.1_g000005 Rmu_sc0003479.1_g000001 Rmu_sc0005118.1_g000006 Rmu_sc0005118.1_g000008 Rmu_sc0005227.1_g000012 Rmu_sc0005442.1_g000010 Rmu_sc0005514.1_g000005 Rmu_sc0005996.1_g000014 Rmu_sc0008800.1_g000002 Rmu_sc0008800.1_g000010 Rmu_sc0008800.1_g000014
rosa_roxburghii	Rroxscaffold_1G00065560 Rroxscaffold_2G00102080 Rroxscaffold_2G00102090 Rroxscaffold_2G00102110 Rroxscaffold_2G00114560 Rroxscaffold_2G00114570 Rroxscaffold_2G00114610 Rroxscaffold_2G00114620 Rroxscaffold_2G00114640 Rroxscaffold_2G00114740 Rroxscaffold_2G00114790 Rroxscaffold_2G00115860 Rroxscaffold_2G00124490 Rroxscaffold_4G00302260 Rroxscaffold_4G00302530 Rroxscaffold_4G00302550 Rroxscaffold_4G00302560 Rroxscaffold_4G00302620 Rroxscaffold_6G00421980 Rroxscaffold_7G00187140 Rroxscaffold_7G00187170
rosa_rugosa	Rorug01G0225000 Rorug01G0230200 Rorug02G0220500 Rorug02G0280000 Rorug02G0285200 Rorug02G0285400 Rorug02G0286300 Rorug02G0286300 Rorug02G0286400 Rorug02G0286900 Rorug02G0377800 Rorug02G0377900 Rorug02G0378000 Rorug02G0378000 Rorug02G0378800 Rorug03G0019800 Rorug04G0452700 Rorug06G0140300 Rorug06G0140500 Rorug06G0140600
rosa_samantha	Rh1CG223600 Rh1CG227200 Rh1CG227500 Rh1CG227600 Rh2BG341200 Rh2BG345300 Rh2BG440200 Rh2DG284500 Rh2DG357900 Rh2DG362100 Rh2DG362600 Rh2DG364500 Rh2DG364600 Rh2DG364700 Rh2DG364800 Rh2DG364900 Rh2DG365000 Rh2DG365400 Rh2DG450400 Rh3AG080000 Rh3BG081900 Rh5AG322100 Rh5BG079800 Rh6AG252100 Rh6BG255600
rosa_wichuraiana	Rw1G020770 Rw1G021290 Rw2G022120 Rw2G026940 Rw2G027360 Rw2G027370 Rw2G027950 Rw2G027960 Rw2G027970 Rw2G035220 Rw3G006890 Rw6G021900 Rw6G021930 Rw6G021950 Rw6G021970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	518
AccB7I	CCANNNNNTGG	1 cut(s)	623
AccI	GTMKAC	1 cut(s)	132
AciI	CCGC	2 cut(s)	279, 843
AclWI	GGATC	3 cut(s)	22, 765, 778
AcsI	RAATTY	1 cut(s)	269
AfaI	GTAC	4 cut(s)	101, 601, 637, 881
AfiI	CCNNNNNNNGG	2 cut(s)	37, 623
AflII	CTTAAG	1 cut(s)	722
AflIII	ACRYGT	1 cut(s)	127
AgsI	TTSAA	4 cut(s)	166, 175, 295, 331
AhlI	ACTAGT	1 cut(s)	505
AjiI	CACGTC	1 cut(s)	128
AluBI	AGCT	4 cut(s)	356, 383, 608, 989
AluI	AGCT	4 cut(s)	356, 383, 608, 989
Alw21I	GWGCWC	1 cut(s)	718
Alw26I	GTCTC	1 cut(s)	971
Alw44I	GTGCAC	1 cut(s)	714
AlwI	GGATC	3 cut(s)	22, 765, 778
AoxI	GGCC	4 cut(s)	21, 57, 406, 682
ApaLI	GTGCAC	1 cut(s)	714
ApeKI	GCWGC	3 cut(s)	443, 668, 953
ApoI	RAATTY	1 cut(s)	269
AspS9I	GGNCC	1 cut(s)	400
AsuHPI	GGTGA	2 cut(s)	539, 901
AsuNHI	GCTAGC	2 cut(s)	344, 860
AvaII	GGWCC	1 cut(s)	400
BaeGI	GKGCMC	1 cut(s)	718
BamHI	GGATCC	1 cut(s)	770
BauI	CACGAG	1 cut(s)	32
BbsI	GAAGAC	1 cut(s)	42
Bbv12I	GWGCWC	1 cut(s)	718
BbvI	GCAGC	3 cut(s)	455, 680, 940
BccI	CCATC	4 cut(s)	106, 550, 626, 863
BceAI	ACGGC	1 cut(s)	422
BcoDI	GTCTC	1 cut(s)	971
BcuI	ACTAGT	1 cut(s)	505
BfaI	CTAG	6 cut(s)	345, 506, 765, 822, 827, 861
BfrI	CTTAAG	1 cut(s)	722
BisI	GCNGC	3 cut(s)	444, 669, 954
BlsI	GCNGC	3 cut(s)	445, 670, 955
BmcAI	AGTACT	1 cut(s)	881
Bme18I	GGWCC	1 cut(s)	400
BmgBI	CACGTC	1 cut(s)	128
BmgT120I	GGNCC	1 cut(s)	400
BmiI	GGNNCC	2 cut(s)	772, 811
BmsI	GCATC	5 cut(s)	70, 92, 553, 751, 927
BmtI	GCTAGC	2 cut(s)	348, 864
BpiI	GAAGAC	1 cut(s)	42
BpmI	CTGGAG	1 cut(s)	388
BpuEI	CTTGAG	1 cut(s)	775
BsaI	GGTCTC	1 cut(s)	971
BsaJI	CCNNGG	5 cut(s)	403, 438, 447, 832, 981
Bsc4I	CCNNNNNNNGG	2 cut(s)	37, 623
Bse1I	ACTGG	5 cut(s)	371, 478, 628, 781, 887
Bse3DI	GCAATG	4 cut(s)	113, 649, 871, 975
BseDI	CCNNGG	5 cut(s)	403, 438, 447, 832, 981
BseGI	GGATG	3 cut(s)	117, 422, 942
BseLI	CCNNNNNNNGG	2 cut(s)	37, 623
BseMI	GCAATG	4 cut(s)	113, 649, 871, 975
BseMII	CTCAG	4 cut(s)	45, 447, 486, 610
BseNI	ACTGG	5 cut(s)	371, 478, 628, 781, 887
BseSI	GKGCMC	1 cut(s)	718
BseXI	GCAGC	3 cut(s)	455, 680, 940
BseYI	CCCAGC	1 cut(s)	37
BsgI	GTGCAG	1 cut(s)	939
BshFI	GGCC	4 cut(s)	23, 59, 408, 684
BsiHKAI	GWGCWC	1 cut(s)	718
BslFI	GGGAC	1 cut(s)	886
BslI	CCNNNNNNNGG	2 cut(s)	37, 623
BsmAI	GTCTC	1 cut(s)	971
BsmFI	GGGAC	1 cut(s)	886
BsnI	GGCC	4 cut(s)	23, 59, 408, 684
Bso31I	GGTCTC	1 cut(s)	971
Bsp1286I	GDGCHC	1 cut(s)	718
Bsp143I	GATC	3 cut(s)	27, 532, 770
Bsp19I	CCATGG	3 cut(s)	447, 832, 981
BspACI	CCGC	2 cut(s)	279, 843
BspANI	GGCC	4 cut(s)	23, 59, 408, 684
BspCNI	CTCAG	4 cut(s)	46, 446, 487, 609
BspLI	GGNNCC	2 cut(s)	772, 811
BspOI	GCTAGC	2 cut(s)	348, 864
BspPI	GGATC	3 cut(s)	22, 765, 778
BspTI	CTTAAG	1 cut(s)	722
BspTNI	GGTCTC	1 cut(s)	971
BsrDI	GCAATG	4 cut(s)	113, 649, 871, 975
BsrI	ACTGG	5 cut(s)	371, 478, 628, 781, 887
BssECI	CCNNGG	5 cut(s)	403, 438, 447, 832, 981
BssMI	GATC	3 cut(s)	27, 532, 770
BssSI	CACGAG	1 cut(s)	32
BssT1I	CCWWGG	4 cut(s)	403, 447, 832, 981
Bst2BI	CACGAG	1 cut(s)	32
Bst4CI	ACNGT	2 cut(s)	11, 515
BstAFI	CTTAAG	1 cut(s)	722
BstAPI	GCANNNNNTGC	1 cut(s)	665
BstC8I	GCNNGC	5 cut(s)	346, 350, 354, 699, 862
BstDEI	CTNAG	5 cut(s)	54, 433, 495, 596, 876
BstDSI	CCRYGG	4 cut(s)	438, 447, 832, 981
BstF5I	GGATG	3 cut(s)	117, 422, 942
BstKTI	GATC	3 cut(s)	30, 535, 773
BstMAI	GTCTC	1 cut(s)	971
BstMBI	GATC	3 cut(s)	27, 532, 770
BstMWI	GCNNNNNNNGC	5 cut(s)	434, 443, 665, 761, 986
BstNSI	RCATGY	1 cut(s)	642
BstSLI	GKGCMC	1 cut(s)	718
BstV1I	GCAGC	3 cut(s)	455, 680, 940
BstV2I	GAAGAC	1 cut(s)	42
BstX2I	RGATCY	1 cut(s)	770
BstYI	RGATCY	1 cut(s)	770
BsuRI	GGCC	4 cut(s)	23, 59, 408, 684
BtgI	CCRYGG	4 cut(s)	438, 447, 832, 981
BtrI	CACGTC	1 cut(s)	128
BtsCI	GGATG	3 cut(s)	117, 422, 942
BtsI	GCAGTG	1 cut(s)	999
BtsIMutI	CAGTG	2 cut(s)	621, 999
Cac8I	GCNNGC	5 cut(s)	346, 350, 354, 699, 862
Cfr13I	GGNCC	1 cut(s)	400
Csp6I	GTAC	4 cut(s)	100, 600, 636, 880
CviAII	CATG	9 cut(s)	142, 302, 448, 590, 639, 665, 833, 900, 982
CviQI	GTAC	4 cut(s)	100, 600, 636, 880
DdeI	CTNAG	5 cut(s)	54, 433, 495, 596, 876
DpnI	GATC	3 cut(s)	29, 534, 772
DpnII	GATC	3 cut(s)	27, 532, 770
DrdI	GACNNNNNNGTC	1 cut(s)	518
DseDI	GACNNNNNNGTC	1 cut(s)	518
Eco130I	CCWWGG	4 cut(s)	403, 447, 832, 981
Eco31I	GGTCTC	1 cut(s)	971
Eco47I	GGWCC	1 cut(s)	400
EcoRI	GAATTC	1 cut(s)	269
EcoT14I	CCWWGG	4 cut(s)	403, 447, 832, 981
EcoT22I	ATGCAT	1 cut(s)	85
ErhI	CCWWGG	4 cut(s)	403, 447, 832, 981
FaeI	CATG	9 cut(s)	145, 305, 451, 593, 642, 668, 836, 903, 985
FaqI	GGGAC	1 cut(s)	886
FatI	CATG	9 cut(s)	141, 301, 447, 589, 638, 664, 832, 899, 981
FblI	GTMKAC	1 cut(s)	132
Fnu4HI	GCNGC	3 cut(s)	444, 669, 954
FokI	GGATG	3 cut(s)	124, 429, 949
Fsp4HI	GCNGC	3 cut(s)	444, 669, 954
FspBI	CTAG	6 cut(s)	345, 506, 765, 822, 827, 861
GluI	GCNGC	3 cut(s)	444, 669, 954
GsaI	CCCAGC	1 cut(s)	41
GsuI	CTGGAG	1 cut(s)	388
HaeIII	GGCC	4 cut(s)	23, 59, 408, 684
Hin1II	CATG	9 cut(s)	145, 305, 451, 593, 642, 668, 836, 903, 985
HincII	GTYRAC	1 cut(s)	511
HindII	GTYRAC	1 cut(s)	511
HindIII	AAGCTT	1 cut(s)	987
HinfI	GANTC	3 cut(s)	197, 241, 594
HphI	GGTGA	2 cut(s)	539, 901
Hpy166II	GTNNAC	3 cut(s)	133, 511, 716
Hpy188I	TCNGA	3 cut(s)	55, 496, 775
Hpy8I	GTNNAC	3 cut(s)	133, 511, 716
HpyAV	CCTTC	4 cut(s)	446, 646, 917, 956
HpyCH4III	ACNGT	2 cut(s)	11, 515
HpyCH4IV	ACGT	1 cut(s)	127
HpyF10VI	GCNNNNNNNGC	5 cut(s)	434, 443, 665, 761, 986
HpyF3I	CTNAG	5 cut(s)	54, 433, 495, 596, 876
HpySE526I	ACGT	1 cut(s)	127
Hsp92II	CATG	9 cut(s)	145, 305, 451, 593, 642, 668, 836, 903, 985
Kzo9I	GATC	3 cut(s)	27, 532, 770
LmnI	GCTCC	1 cut(s)	380
Lsp1109I	GCAGC	3 cut(s)	455, 680, 940
LweI	GCATC	5 cut(s)	70, 92, 553, 751, 927
MaeI	CTAG	6 cut(s)	345, 506, 765, 822, 827, 861
MaeII	ACGT	1 cut(s)	127
MaeIII	GTNAC	4 cut(s)	119, 385, 838, 926
MalI	GATC	3 cut(s)	29, 534, 772
MboI	GATC	3 cut(s)	27, 532, 770
MboII	GAAGA	7 cut(s)	42, 192, 278, 542, 701, 904, 932
MflI	RGATCY	1 cut(s)	770
MhlI	GDGCHC	1 cut(s)	718
MluCI	AATT	6 cut(s)	230, 245, 269, 456, 479, 610
MlyI	GAGTC	1 cut(s)	588
MnlI	CCTC	7 cut(s)	41, 49, 90, 148, 363, 538, 682
Mph1103I	ATGCAT	1 cut(s)	85
MseI	TTAA	2 cut(s)	396, 723
MslI	CAYNNNNRTG	3 cut(s)	690, 935, 980
MspA1I	CMGCKG	1 cut(s)	845
MspCI	CTTAAG	1 cut(s)	722
MwoI	GCNNNNNNNGC	5 cut(s)	434, 443, 665, 761, 986
NcoI	CCATGG	3 cut(s)	447, 832, 981
NdeII	GATC	3 cut(s)	27, 532, 770
NheI	GCTAGC	2 cut(s)	344, 860
NlaIII	CATG	9 cut(s)	145, 305, 451, 593, 642, 668, 836, 903, 985
NlaIV	GGNNCC	2 cut(s)	772, 811
NsiI	ATGCAT	1 cut(s)	85
NspI	RCATGY	1 cut(s)	642
PcsI	WCGNNNNNNNCGW	1 cut(s)	124
PfeI	GAWTC	2 cut(s)	197, 241
PflMI	CCANNNNNTGG	1 cut(s)	623
PkrI	GCNGC	3 cut(s)	445, 670, 955
PleI	GAGTC	1 cut(s)	588
PpsI	GAGTC	1 cut(s)	588
PspFI	CCCAGC	1 cut(s)	37
PspN4I	GGNNCC	2 cut(s)	772, 811
PspPI	GGNCC	1 cut(s)	400
PsuI	RGATCY	1 cut(s)	770
RsaI	GTAC	4 cut(s)	101, 601, 637, 881
RsaNI	GTAC	4 cut(s)	100, 600, 636, 880
RseI	CAYNNNNRTG	3 cut(s)	690, 935, 980
SaqAI	TTAA	2 cut(s)	396, 723
SatI	GCNGC	3 cut(s)	444, 669, 954
Sau3AI	GATC	3 cut(s)	27, 532, 770
Sau96I	GGNCC	1 cut(s)	400
ScaI	AGTACT	1 cut(s)	881
SchI	GAGTC	1 cut(s)	588
SduI	GDGCHC	1 cut(s)	718
SfaNI	GCATC	5 cut(s)	70, 92, 553, 751, 927
SinI	GGWCC	1 cut(s)	400
SmiMI	CAYNNNNRTG	3 cut(s)	690, 935, 980
SmlI	CTYRAG	2 cut(s)	722, 790
SmoI	CTYRAG	2 cut(s)	722, 790
SpeI	ACTAGT	1 cut(s)	505
Sse9I	AATT	6 cut(s)	230, 245, 269, 456, 479, 610
SsiI	CCGC	2 cut(s)	279, 843
SspMI	CTAG	6 cut(s)	345, 506, 765, 822, 827, 861
StyI	CCWWGG	4 cut(s)	403, 447, 832, 981
TaaI	ACNGT	2 cut(s)	11, 515
TaiI	ACGT	1 cut(s)	130
TasI	AATT	6 cut(s)	230, 245, 269, 456, 479, 610
TatI	WGTACW	1 cut(s)	879
TfiI	GAWTC	2 cut(s)	197, 241
Tru1I	TTAA	2 cut(s)	396, 723
Tru9I	TTAA	2 cut(s)	396, 723
TscAI	CASTG	2 cut(s)	628, 1006
TseI	GCWGC	3 cut(s)	443, 668, 953
TspDTI	ATGAA	4 cut(s)	158, 279, 351, 565
TspGWI	ACGGA	1 cut(s)	138
TspRI	CASTG	2 cut(s)	628, 1006
Van91I	CCANNNNNTGG	1 cut(s)	623
Vha464I	CTTAAG	1 cut(s)	722
VneI	GTGCAC	1 cut(s)	714
VpaK11BI	GGWCC	1 cut(s)	400
XapI	RAATTY	1 cut(s)	269
XceI	RCATGY	1 cut(s)	642
XcmI	CCANNNNNNNNNTGG	1 cut(s)	410
XmiI	GTMKAC	1 cut(s)	132
XspI	CTAG	6 cut(s)	345, 506, 765, 822, 827, 861
ZrmI	AGTACT	1 cut(s)	881
Zsp2I	ATGCAT	1 cut(s)	85

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.