Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0000141

Physical Location & Seq

Genomic Coordinates Forward (+)

45536626 .. 45537705

Gene Structure 1080 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G021290.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 975 bp

ATGTTGGGGGCATGGTCTTCCGAAGCCACTTCTCGCAGTCTCCAAGATGCATTGGCGTATGGGAGGTATGAGCAATGGATAGCTCGTTATGGACGTGTGTATGCTGATATCAAAGAGAAGGAGGATCGCTTCAAGATATTCAAGGAAAATGAGGCATTTATAGAATCTTCCAACAATGACGGAAACAAACTTTACAAGTTGAGTTTGAACCAATTTGCAGACCTTACAAATGAAGAGTTCACTGCCTCAAGAAATCGATTCAAGGCGCATGAATGTTCCACAAAGACCACTACTTTCAAGTACGAAAATGCTACTGTGCCGGCTACAATGGACTGGAGAAAGAAGGGAGCTGTAACTCCCATCAAGGACCAAGGCCAATGTGGAAGTTGTTGGGCATTCTCTGCAGTGGGAGCTATGGAAGGAATCACTCAACTTACAACTGGTAAACTAATCTCTTTGTCTGAGCAAGAGCTTGTTGACTGTGATGTCAAAGGTGTAGACCAAGGCTGTGCAGGTGGCCTTATGGATGATGCATTTCAGTTTGTTATTCAAAATCATGGTATTAATACCGAGGCTAATTATCCCTACACGGCTGTCGATGGTACATGCAATGCCAAGAAGGAAGCAGGCCATGCTGCCACAATAACTGGCCACGAAGATGTGCCTGCAAACAGCGAAAGTGCCCTTCTTAAGGCCGTGGCTAATCAACCTATCTCTGTTGCTATTGATGCTAGTGGATCTGACTTCCAGTTCTATTCAAGTGGTGTTTTCACAGGAACATGTGGAACGGGTCTAGACCATGGTGTTACCGCTGTTGGTTATGGTGTGAGTGCTGATGGGACAAAGTACTGGTTAGTAAAGAACTCATGGGGTGCACAATGGGGTGAAGAAGGTTACATAAGAATGCAAAGAGATGTTGCTGCACCGGAAGGTCTGTGTGGTATTGCCATGGAAGCCTCTTACCCCACTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000323 GO:0000325 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009505 GO:0009555 GO:0009605 GO:0009607 GO:0009620 GO:0009626 GO:0009791 GO:0009908 GO:0009987 GO:0010623 GO:0012501 GO:0012505 GO:0016787 GO:0019538 GO:0022414 GO:0030154 GO:0030163 GO:0030312 GO:0032501 GO:0032502 GO:0033554 GO:0034050 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048468 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050832 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0070011 GO:0071704 GO:0071944 GO:0090567 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I29 Peptidase_C1

Protein Analysis

324

Amino Acids

35.11

Weight (kDa)

4.95

Isoelectric Point (pI)

17.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I29	PF08246	23 - 80	1.5e-17	Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1	PF00112	106 - 323	5.2e-85	Papain family cysteine protease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22160
fragaria_vesca	FvH4_1g23580 FvH4_1g25982 FvH4_2g17070 FvH4_3g40500 FvH4_6g27180 FvH4_6g27320 FvH4_6g33300 FvH4_6g33310 FvH4_7g09480 FvH4_7g13000 FvH4_7g13320 FvH4_7g13600
malus_domestica	MD00G1208000.v1.1 MD09G1238200.v1.1 MD09G1238600.v1.1 MD09G1238800.v1.1 MD09G1239100.v1.1 MD16G1226900.v1.1 MD16G1242700.v1.1 MD16G1244200.v1.1 MD16G1245500.v1.1 MD16G1245800.v1.1 MD17G1231600.v1.1 MD17G1231700.v1.1 MD17G1231800.v1.1 MD17G1232200.v1.1 MD17G1232300.v1.1 MD17G1232400.v1.1
prunus_persica	Prupe.1G072300_v2.0.a1 Prupe.1G072400_v2.0.a1 Prupe.3G106300_v2.0.a1 Prupe.3G106400_v2.0.a1 Prupe.3G119400_v2.0.a1 Prupe.3G120600_v2.0.a1 Prupe.3G121900_v2.0.a1 Prupe.3G122000_v2.0.a1 Prupe.3G122100_v2.0.a1 Prupe.3G122200_v2.0.a1 Prupe.3G122700_v2.0.a1 Prupe.5G055900_v2.0.a1 Prupe.5G056500_v2.0.a1
pyrus_communis	pycom09g15770 pycom09g15780 pycom09g15790 pycom16g20640 pycom17g18390
rosa_chinensis	RchiOBHm_Chr1g0352141 RchiOBHm_Chr1g0352581 RchiOBHm_Chr1g0352601 RchiOBHm_Chr1g0352621 RchiOBHm_Chr1g0352631 RchiOBHm_Chr2g0119131 RchiOBHm_Chr2g0128691 RchiOBHm_Chr2g0128701 RchiOBHm_Chr2g0129151 RchiOBHm_Chr2g0129221 RchiOBHm_Chr2g0129401 RchiOBHm_Chr2g0129421 RchiOBHm_Chr2g0129431 RchiOBHm_Chr2g0129471 RchiOBHm_Chr2g0129481 RchiOBHm_Chr2g0129491 RchiOBHm_Chr2g0143051 RchiOBHm_Chr2g0143121 RchiOBHm_Chr2g0143171 RchiOBHm_Chr3g0457341 RchiOBHm_Chr5g0049011 RchiOBHm_Chr6g0281281 RchiOBHm_Chr6g0281311
rosa_laevigata	RLG00000012975 RLG00000012976 RLG00000012979 RLG00000018447 RLG00000019018 RLG00000019061 RLG00000019066 RLG00000019078 RLG00000019079 RLG00000019080 RLG00000019083 RLG00000019085 RLG00000020009 RLG00000020010 RLG00000025234 RLG00000028326 RLG00000028327 RLG00000028328 RLG00000028329 RLG00000028357 RLG00000031784
rosa_multiflora	Rmu_co8169188.1_g000001 Rmu_co8261007.1_g000001 Rmu_co8314361.1_g000001 Rmu_sc0000109.1_g000014 Rmu_sc0000638.1_g000020 Rmu_sc0000847.1_g000020 Rmu_sc0000847.1_g000028 Rmu_sc0000847.1_g000037 Rmu_sc0000847.1_g000046 Rmu_sc0000911.1_g000034 Rmu_sc0000999.1_g000021 Rmu_sc0001171.1_g000013 Rmu_sc0001171.1_g000018 Rmu_sc0001171.1_g000019 Rmu_sc0001653.1_g000004 Rmu_sc0002277.1_g000005 Rmu_sc0003479.1_g000001 Rmu_sc0005118.1_g000006 Rmu_sc0005118.1_g000008 Rmu_sc0005227.1_g000012 Rmu_sc0005442.1_g000010 Rmu_sc0005514.1_g000005 Rmu_sc0005996.1_g000014 Rmu_sc0008800.1_g000002 Rmu_sc0008800.1_g000010 Rmu_sc0008800.1_g000014
rosa_roxburghii	Rroxscaffold_1G00065560 Rroxscaffold_2G00102080 Rroxscaffold_2G00102090 Rroxscaffold_2G00102110 Rroxscaffold_2G00114560 Rroxscaffold_2G00114570 Rroxscaffold_2G00114610 Rroxscaffold_2G00114620 Rroxscaffold_2G00114640 Rroxscaffold_2G00114740 Rroxscaffold_2G00114790 Rroxscaffold_2G00115860 Rroxscaffold_2G00124490 Rroxscaffold_4G00302260 Rroxscaffold_4G00302530 Rroxscaffold_4G00302550 Rroxscaffold_4G00302560 Rroxscaffold_4G00302620 Rroxscaffold_6G00421980 Rroxscaffold_7G00187140 Rroxscaffold_7G00187170
rosa_rugosa	Rorug01G0225000 Rorug01G0230200 Rorug02G0220500 Rorug02G0280000 Rorug02G0285200 Rorug02G0285400 Rorug02G0286300 Rorug02G0286300 Rorug02G0286400 Rorug02G0286900 Rorug02G0377800 Rorug02G0377900 Rorug02G0378000 Rorug02G0378000 Rorug02G0378800 Rorug03G0019800 Rorug04G0452700 Rorug06G0140300 Rorug06G0140500 Rorug06G0140600
rosa_samantha	Rh1CG223600 Rh1CG227200 Rh1CG227500 Rh1CG227600 Rh2BG341200 Rh2BG345300 Rh2BG440200 Rh2DG284500 Rh2DG357900 Rh2DG362100 Rh2DG362600 Rh2DG364500 Rh2DG364600 Rh2DG364700 Rh2DG364800 Rh2DG364900 Rh2DG365000 Rh2DG365400 Rh2DG450400 Rh3AG080000 Rh3BG081900 Rh5AG322100 Rh5BG079800 Rh6AG252100 Rh6BG255600
rosa_wichuraiana	Rw1G020770 Rw1G021290 Rw2G022120 Rw2G026940 Rw2G027360 Rw2G027370 Rw2G027950 Rw2G027960 Rw2G027970 Rw2G035220 Rw3G006890 Rw6G021900 Rw6G021930 Rw6G021950 Rw6G021970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	503
AasI	GACNNNNNNGTC	1 cut(s)	485
Acc36I	ACCTGC	1 cut(s)	503
AccI	GTMKAC	1 cut(s)	498
AciI	CCGC	1 cut(s)	810
AclWI	GGATC	2 cut(s)	132, 745
AcoI	YGGCCR	1 cut(s)	649
AfaI	GTAC	3 cut(s)	302, 604, 848
AfiI	CCNNNNNNNGG	1 cut(s)	691
AflII	CTTAAG	1 cut(s)	689
AflIII	ACRYGT	2 cut(s)	94, 779
AgsI	TTSAA	7 cut(s)	133, 142, 208, 262, 298, 551, 759
AjiI	CACGTC	1 cut(s)	95
AluBI	AGCT	4 cut(s)	83, 350, 413, 472
AluI	AGCT	4 cut(s)	83, 350, 413, 472
Alw21I	GWGCWC	1 cut(s)	877
Alw26I	GTCTC	1 cut(s)	44
Alw44I	GTGCAC	1 cut(s)	873
AlwI	GGATC	2 cut(s)	132, 745
AoxI	GGCC	5 cut(s)	373, 517, 628, 649, 693
ApaLI	GTGCAC	1 cut(s)	873
ApeKI	GCWGC	2 cut(s)	635, 920
AseI	ATTAAT	1 cut(s)	564
AspLEI	GCGC	1 cut(s)	268
AspS9I	GGNCC	1 cut(s)	367
AsuHPI	GGTGA	1 cut(s)	896
AvaII	GGWCC	1 cut(s)	367
BaeGI	GKGCMC	2 cut(s)	685, 877
BalI	TGGCCA	1 cut(s)	651
BbsI	GAAGAC	1 cut(s)	9
Bbv12I	GWGCWC	1 cut(s)	877
BbvI	GCAGC	2 cut(s)	622, 907
BccI	CCATC	3 cut(s)	368, 593, 830
BceAI	ACGGC	2 cut(s)	606, 680
BcoDI	GTCTC	1 cut(s)	44
BfaI	CTAG	2 cut(s)	732, 794
BfmI	CTRYAG	1 cut(s)	402
BfrI	CTTAAG	1 cut(s)	689
BfuAI	ACCTGC	1 cut(s)	503
BisI	GCNGC	2 cut(s)	636, 921
BlsI	GCNGC	2 cut(s)	637, 922
BmcAI	AGTACT	1 cut(s)	848
Bme18I	GGWCC	1 cut(s)	367
BmgBI	CACGTC	1 cut(s)	95
BmgT120I	GGNCC	1 cut(s)	367
BmsI	GCATC	3 cut(s)	37, 520, 718
BpiI	GAAGAC	1 cut(s)	9
BpmI	CTGGAG	1 cut(s)	355
BpuEI	CTTGAG	1 cut(s)	232
Bsa29I	ATCGAT	1 cut(s)	256
BsaJI	CCNNGG	6 cut(s)	370, 502, 570, 696, 799, 948
BsaWI	WCCGGW	1 cut(s)	925
Bsc4I	CCNNNNNNNGG	1 cut(s)	691
Bse118I	RCCGGY	1 cut(s)	319
Bse1I	ACTGG	5 cut(s)	338, 445, 652, 748, 854
Bse3DI	GCAATG	2 cut(s)	80, 616
BseCI	ATCGAT	1 cut(s)	256
BseDI	CCNNGG	6 cut(s)	370, 502, 570, 696, 799, 948
BseGI	GGATG	1 cut(s)	532
BseLI	CCNNNNNNNGG	1 cut(s)	691
BseMI	GCAATG	2 cut(s)	80, 616
BseMII	CTCAG	1 cut(s)	453
BseNI	ACTGG	5 cut(s)	338, 445, 652, 748, 854
BseSI	GKGCMC	2 cut(s)	685, 877
BseXI	GCAGC	2 cut(s)	622, 907
BsgI	GTGCAG	2 cut(s)	531, 906
BshFI	GGCC	5 cut(s)	375, 519, 630, 651, 695
BshVI	ATCGAT	1 cut(s)	256
BsiHKAI	GWGCWC	1 cut(s)	877
BsiSI	CCGG	2 cut(s)	320, 926
BslFI	GGGAC	1 cut(s)	853
BslI	CCNNNNNNNGG	1 cut(s)	691
BsmAI	GTCTC	1 cut(s)	44
BsmFI	GGGAC	1 cut(s)	853
BsmI	GAATGC	2 cut(s)	395, 909
BsnI	GGCC	5 cut(s)	375, 519, 630, 651, 695
Bsp1286I	GDGCHC	2 cut(s)	685, 877
Bsp143I	GATC	2 cut(s)	124, 737
Bsp19I	CCATGG	2 cut(s)	799, 948
BspACI	CCGC	1 cut(s)	810
BspANI	GGCC	5 cut(s)	375, 519, 630, 651, 695
BspCNI	CTCAG	1 cut(s)	454
BspDI	ATCGAT	1 cut(s)	256
BspMAI	CTGCAG	1 cut(s)	406
BspMI	ACCTGC	1 cut(s)	503
BspPI	GGATC	2 cut(s)	132, 745
BspTI	CTTAAG	1 cut(s)	689
BsrDI	GCAATG	2 cut(s)	80, 616
BsrFI	RCCGGY	1 cut(s)	319
BsrI	ACTGG	5 cut(s)	338, 445, 652, 748, 854
BssAI	RCCGGY	1 cut(s)	319
BssECI	CCNNGG	6 cut(s)	370, 502, 570, 696, 799, 948
BssMI	GATC	2 cut(s)	124, 737
BssT1I	CCWWGG	4 cut(s)	370, 502, 799, 948
Bst4CI	ACNGT	2 cut(s)	316, 482
Bst6I	CTCTTC	1 cut(s)	228
BstAFI	CTTAAG	1 cut(s)	689
BstAPI	GCANNNNNTGC	2 cut(s)	401, 632
BstC8I	GCNNGC	3 cut(s)	321, 628, 666
BstDEI	CTNAG	1 cut(s)	462
BstDSI	CCRYGG	3 cut(s)	696, 799, 948
BstENI	CCTNNNNNAGG	1 cut(s)	689
BstF5I	GGATG	1 cut(s)	532
BstHHI	GCGC	1 cut(s)	268
BstKTI	GATC	2 cut(s)	127, 740
BstMAI	GTCTC	1 cut(s)	44
BstMBI	GATC	2 cut(s)	124, 737
BstMWI	GCNNNNNNNGC	5 cut(s)	401, 410, 632, 728, 953
BstNSI	RCATGY	2 cut(s)	609, 783
BstSFI	CTRYAG	1 cut(s)	402
BstSLI	GKGCMC	2 cut(s)	685, 877
BstV1I	GCAGC	2 cut(s)	622, 907
BstV2I	GAAGAC	1 cut(s)	9
BstX2I	RGATCY	1 cut(s)	737
BstYI	RGATCY	1 cut(s)	737
Bsu15I	ATCGAT	1 cut(s)	256
BsuRI	GGCC	5 cut(s)	375, 519, 630, 651, 695
BsuTUI	ATCGAT	1 cut(s)	256
BtgI	CCRYGG	3 cut(s)	696, 799, 948
BtrI	CACGTC	1 cut(s)	95
BtsCI	GGATG	1 cut(s)	532
BtsI	GCAGTG	3 cut(s)	240, 411, 966
BtsIMutI	CAGTG	3 cut(s)	240, 411, 966
BveI	ACCTGC	1 cut(s)	503
Cac8I	GCNNGC	3 cut(s)	321, 628, 666
CfoI	GCGC	1 cut(s)	268
Cfr10I	RCCGGY	1 cut(s)	319
Cfr13I	GGNCC	1 cut(s)	367
ClaI	ATCGAT	1 cut(s)	256
Csp6I	GTAC	3 cut(s)	301, 603, 847
CviAII	CATG	9 cut(s)	12, 269, 557, 606, 632, 780, 800, 867, 949
CviQI	GTAC	3 cut(s)	301, 603, 847
DdeI	CTNAG	1 cut(s)	462
DpnI	GATC	2 cut(s)	126, 739
DpnII	GATC	2 cut(s)	124, 737
DrdI	GACNNNNNNGTC	1 cut(s)	485
DseDI	GACNNNNNNGTC	1 cut(s)	485
EaeI	YGGCCR	1 cut(s)	649
Eam1104I	CTCTTC	1 cut(s)	228
EarI	CTCTTC	1 cut(s)	228
Eco130I	CCWWGG	4 cut(s)	370, 502, 799, 948
Eco32I	GATATC	1 cut(s)	109
Eco47I	GGWCC	1 cut(s)	367
EcoNI	CCTNNNNNAGG	1 cut(s)	689
EcoRV	GATATC	1 cut(s)	109
EcoT14I	CCWWGG	4 cut(s)	370, 502, 799, 948
EcoT22I	ATGCAT	2 cut(s)	52, 535
ErhI	CCWWGG	4 cut(s)	370, 502, 799, 948
FaeI	CATG	9 cut(s)	15, 272, 560, 609, 635, 783, 803, 870, 952
FaqI	GGGAC	1 cut(s)	853
FatI	CATG	9 cut(s)	11, 268, 556, 605, 631, 779, 799, 866, 948
FblI	GTMKAC	1 cut(s)	498
Fnu4HI	GCNGC	2 cut(s)	636, 921
FokI	GGATG	1 cut(s)	539
Fsp4HI	GCNGC	2 cut(s)	636, 921
FspBI	CTAG	2 cut(s)	732, 794
GlaI	GCGC	1 cut(s)	267
GluI	GCNGC	2 cut(s)	636, 921
GsuI	CTGGAG	1 cut(s)	355
HaeIII	GGCC	5 cut(s)	375, 519, 630, 651, 695
HapII	CCGG	2 cut(s)	320, 926
HhaI	GCGC	1 cut(s)	268
Hin1II	CATG	9 cut(s)	15, 272, 560, 609, 635, 783, 803, 870, 952
Hin6I	GCGC	1 cut(s)	266
HinP1I	GCGC	1 cut(s)	266
HincII	GTYRAC	1 cut(s)	478
HindII	GTYRAC	1 cut(s)	478
HinfI	GANTC	3 cut(s)	164, 258, 423
HpaII	CCGG	2 cut(s)	320, 926
HphI	GGTGA	1 cut(s)	896
Hpy166II	GTNNAC	5 cut(s)	240, 446, 478, 499, 875
Hpy188I	TCNGA	3 cut(s)	22, 463, 742
Hpy188III	TCNNGA	3 cut(s)	133, 249, 794
Hpy8I	GTNNAC	5 cut(s)	240, 446, 478, 499, 875
HpyAV	CCTTC	7 cut(s)	112, 337, 413, 613, 695, 884, 923
HpyCH4III	ACNGT	2 cut(s)	316, 482
HpyCH4IV	ACGT	1 cut(s)	94
HpyF10VI	GCNNNNNNNGC	5 cut(s)	401, 410, 632, 728, 953
HpyF3I	CTNAG	1 cut(s)	462
HpySE526I	ACGT	1 cut(s)	94
Hsp92II	CATG	9 cut(s)	15, 272, 560, 609, 635, 783, 803, 870, 952
HspAI	GCGC	1 cut(s)	266
KroI	GCCGGC	1 cut(s)	319
KroNI	GCCGGC	1 cut(s)	321
Kzo9I	GATC	2 cut(s)	124, 737
LmnI	GCTCC	2 cut(s)	347, 410
Lsp1109I	GCAGC	2 cut(s)	622, 907
LweI	GCATC	3 cut(s)	37, 520, 718
MaeI	CTAG	2 cut(s)	732, 794
MaeII	ACGT	1 cut(s)	94
MaeIII	GTNAC	3 cut(s)	352, 805, 893
MalI	GATC	2 cut(s)	126, 739
MboI	GATC	2 cut(s)	124, 737
MboII	GAAGA	5 cut(s)	9, 159, 245, 668, 899
MflI	RGATCY	1 cut(s)	737
MhlI	GDGCHC	2 cut(s)	685, 877
MlsI	TGGCCA	1 cut(s)	651
MluCI	AATT	2 cut(s)	212, 577
MluNI	TGGCCA	1 cut(s)	651
MmeI	TCCRAC	1 cut(s)	195
MnlI	CCTC	6 cut(s)	57, 115, 145, 256, 565, 967
Mox20I	TGGCCA	1 cut(s)	651
Mph1103I	ATGCAT	2 cut(s)	52, 535
MroNI	GCCGGC	1 cut(s)	319
MscI	TGGCCA	1 cut(s)	651
MseI	TTAA	3 cut(s)	564, 690, 973
MslI	CAYNNNNRTG	2 cut(s)	657, 902
Msp20I	TGGCCA	1 cut(s)	651
MspA1I	CMGCKG	1 cut(s)	812
MspCI	CTTAAG	1 cut(s)	689
MspI	CCGG	2 cut(s)	320, 926
Mva1269I	GAATGC	2 cut(s)	395, 909
MwoI	GCNNNNNNNGC	5 cut(s)	401, 410, 632, 728, 953
NaeI	GCCGGC	1 cut(s)	321
NcoI	CCATGG	2 cut(s)	799, 948
NdeII	GATC	2 cut(s)	124, 737
NgoMIV	GCCGGC	1 cut(s)	319
NlaIII	CATG	9 cut(s)	15, 272, 560, 609, 635, 783, 803, 870, 952
NsiI	ATGCAT	2 cut(s)	52, 535
NspI	RCATGY	2 cut(s)	609, 783
PaqCI	CACCTGC	1 cut(s)	503
PciI	ACATGT	1 cut(s)	779
PcsI	WCGNNNNNNNCGW	1 cut(s)	91
PctI	GAATGC	2 cut(s)	395, 909
PdiI	GCCGGC	1 cut(s)	321
PfeI	GAWTC	3 cut(s)	164, 258, 423
PkrI	GCNGC	2 cut(s)	637, 922
PscI	ACATGT	1 cut(s)	779
PshBI	ATTAAT	1 cut(s)	564
PspPI	GGNCC	1 cut(s)	367
PstI	CTGCAG	1 cut(s)	406
PsuI	RGATCY	1 cut(s)	737
RsaI	GTAC	3 cut(s)	302, 604, 848
RsaNI	GTAC	3 cut(s)	301, 603, 847
RseI	CAYNNNNRTG	2 cut(s)	657, 902
SaqAI	TTAA	3 cut(s)	564, 690, 973
SatI	GCNGC	2 cut(s)	636, 921
Sau3AI	GATC	2 cut(s)	124, 737
Sau96I	GGNCC	1 cut(s)	367
ScaI	AGTACT	1 cut(s)	848
SduI	GDGCHC	2 cut(s)	685, 877
SfaNI	GCATC	3 cut(s)	37, 520, 718
SfcI	CTRYAG	1 cut(s)	402
SinI	GGWCC	1 cut(s)	367
SmiMI	CAYNNNNRTG	2 cut(s)	657, 902
SmlI	CTYRAG	2 cut(s)	247, 689
SmoI	CTYRAG	2 cut(s)	247, 689
Sse9I	AATT	2 cut(s)	212, 577
SsiI	CCGC	1 cut(s)	810
SspMI	CTAG	2 cut(s)	732, 794
StyI	CCWWGG	4 cut(s)	370, 502, 799, 948
TaaI	ACNGT	2 cut(s)	316, 482
TaiI	ACGT	1 cut(s)	97
TaqI	TCGA	2 cut(s)	256, 597
TasI	AATT	2 cut(s)	212, 577
TatI	WGTACW	1 cut(s)	846
TfiI	GAWTC	3 cut(s)	164, 258, 423
Tru1I	TTAA	3 cut(s)	564, 690, 973
Tru9I	TTAA	3 cut(s)	564, 690, 973
TscAI	CASTG	3 cut(s)	247, 411, 973
TseI	GCWGC	2 cut(s)	635, 920
TspDTI	ATGAA	2 cut(s)	246, 285
TspGWI	ACGGA	1 cut(s)	195
TspRI	CASTG	3 cut(s)	247, 411, 973
Vha464I	CTTAAG	1 cut(s)	689
VneI	GTGCAC	1 cut(s)	873
VpaK11BI	GGWCC	1 cut(s)	367
VspI	ATTAAT	1 cut(s)	564
XagI	CCTNNNNNAGG	1 cut(s)	689
XbaI	TCTAGA	1 cut(s)	793
XceI	RCATGY	2 cut(s)	609, 783
XcmI	CCANNNNNNNNNTGG	1 cut(s)	377
XmiI	GTMKAC	1 cut(s)	498
XspI	CTAG	2 cut(s)	732, 794
ZrmI	AGTACT	1 cut(s)	848
Zsp2I	ATGCAT	2 cut(s)	52, 535

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.