Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0000141

Physical Location & Seq

Genomic Coordinates Reverse (-)

42840729 .. 42841878

Gene Structure 1150 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G027370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1014 bp

ATGTACTCTAAATGTATTTGCCTGTGCTTGATCCTCATATTTGGGGCTTGGTCTTCTGAAGCCACCTCTCGGAATCTTGAAGATGCTGCCATGTATGAGAGATACGAGCAATGGATGACTCGTTATGGACGCCAATACAGCAGCATGAATGAGAAGGAGACTCGCTTCAATGTATTCAAGAAAAATGTGGCAATGATTGATTCTTCGAATAACGATGTAAACAAACCATACAAATTGAGCGTCAATCAATTTGCAGACCTTACAACTGAAGAATTCAAAGCCCAAAGGACTGGATTCAAGGGTCTTCGGGATGTCCCACCACCGACTACTTCTTTCAAGTACGAAAATGTTAGCATGGTTCCATCTTCACTAGACTGGAGAACGAAAGGAGCTGTAATGCCTGTCAAGGACCAAGGCCAATGTGGAAGCTGTTGGGCTTTCGCAACAGTGGGAGCCTTGGAAGGAGCTCTTCAGCTTGCTACTGGTAAACTAGTCTCTATGTCTGAGCAAGAGTTGGTTGACTGTAACGTCGGAGGTGAGAATGAAGGCTGTGAAGGTGGCTACACCGACGTTGCCTTTCAGTACATCATAGAAAAGCACGGGCTTACAAACGAGGCTAATTATCCCTATACTGCTACTGATAATATGTGCAATACTGGAGAGGCAGACAGCCCTTCAGGTAGCATAACCGGCTACGAAGATGTGCCTGTAAACAGTGAACAGGACCTTCTCAAGGCTGTTGCTAATCAACCTGTATCCGTTTGCATTCAAGCTGAGGGTTTATTCCAATCCTATTCATCTGGTGTATTGACAGGAGATTGTGGAACGGACCTCGACCATTGTGTTACCGCTATTGGTTACGGAACAACTGATGATGGGATCGATTATTGGTTGCTGAAAAACTCATGGGGCACAGAATGGGGTGAAGAAGGCTACGTTAGGATACAAAGAAATATAGAGGCTGTGGAAGGAATGTGTGGCATTGCTACGTCAGCCTCTTACGCTACTGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000323 GO:0000325 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009505 GO:0009555 GO:0009605 GO:0009607 GO:0009620 GO:0009626 GO:0009791 GO:0009908 GO:0009987 GO:0010623 GO:0012501 GO:0012505 GO:0016787 GO:0019538 GO:0022414 GO:0030154 GO:0030163 GO:0030312 GO:0032501 GO:0032502 GO:0033554 GO:0034050 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048468 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050832 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0070011 GO:0071704 GO:0071944 GO:0090567 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I29 Peptidase_C1

Protein Analysis

337

Amino Acids

37.0

Weight (kDa)

4.47

Isoelectric Point (pI)

32.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I29	PF08246	35 - 92	2.4e-18	Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1	PF00112	120 - 335	5e-78	Papain family cysteine protease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22160
fragaria_vesca	FvH4_1g23580 FvH4_1g25982 FvH4_2g17070 FvH4_3g40500 FvH4_6g27180 FvH4_6g27320 FvH4_6g33300 FvH4_6g33310 FvH4_7g09480 FvH4_7g13000 FvH4_7g13320 FvH4_7g13600
malus_domestica	MD00G1208000.v1.1 MD09G1238200.v1.1 MD09G1238600.v1.1 MD09G1238800.v1.1 MD09G1239100.v1.1 MD16G1226900.v1.1 MD16G1242700.v1.1 MD16G1244200.v1.1 MD16G1245500.v1.1 MD16G1245800.v1.1 MD17G1231600.v1.1 MD17G1231700.v1.1 MD17G1231800.v1.1 MD17G1232200.v1.1 MD17G1232300.v1.1 MD17G1232400.v1.1
prunus_persica	Prupe.1G072300_v2.0.a1 Prupe.1G072400_v2.0.a1 Prupe.3G106300_v2.0.a1 Prupe.3G106400_v2.0.a1 Prupe.3G119400_v2.0.a1 Prupe.3G120600_v2.0.a1 Prupe.3G121900_v2.0.a1 Prupe.3G122000_v2.0.a1 Prupe.3G122100_v2.0.a1 Prupe.3G122200_v2.0.a1 Prupe.3G122700_v2.0.a1 Prupe.5G055900_v2.0.a1 Prupe.5G056500_v2.0.a1
pyrus_communis	pycom09g15770 pycom09g15780 pycom09g15790 pycom16g20640 pycom17g18390
rosa_chinensis	RchiOBHm_Chr1g0352141 RchiOBHm_Chr1g0352581 RchiOBHm_Chr1g0352601 RchiOBHm_Chr1g0352621 RchiOBHm_Chr1g0352631 RchiOBHm_Chr2g0119131 RchiOBHm_Chr2g0128691 RchiOBHm_Chr2g0128701 RchiOBHm_Chr2g0129151 RchiOBHm_Chr2g0129221 RchiOBHm_Chr2g0129401 RchiOBHm_Chr2g0129421 RchiOBHm_Chr2g0129431 RchiOBHm_Chr2g0129471 RchiOBHm_Chr2g0129481 RchiOBHm_Chr2g0129491 RchiOBHm_Chr2g0143051 RchiOBHm_Chr2g0143121 RchiOBHm_Chr2g0143171 RchiOBHm_Chr3g0457341 RchiOBHm_Chr5g0049011 RchiOBHm_Chr6g0281281 RchiOBHm_Chr6g0281311
rosa_laevigata	RLG00000012975 RLG00000012976 RLG00000012979 RLG00000018447 RLG00000019018 RLG00000019061 RLG00000019066 RLG00000019078 RLG00000019079 RLG00000019080 RLG00000019083 RLG00000019085 RLG00000020009 RLG00000020010 RLG00000025234 RLG00000028326 RLG00000028327 RLG00000028328 RLG00000028329 RLG00000028357 RLG00000031784
rosa_multiflora	Rmu_co8169188.1_g000001 Rmu_co8261007.1_g000001 Rmu_co8314361.1_g000001 Rmu_sc0000109.1_g000014 Rmu_sc0000638.1_g000020 Rmu_sc0000847.1_g000020 Rmu_sc0000847.1_g000028 Rmu_sc0000847.1_g000037 Rmu_sc0000847.1_g000046 Rmu_sc0000911.1_g000034 Rmu_sc0000999.1_g000021 Rmu_sc0001171.1_g000013 Rmu_sc0001171.1_g000018 Rmu_sc0001171.1_g000019 Rmu_sc0001653.1_g000004 Rmu_sc0002277.1_g000005 Rmu_sc0003479.1_g000001 Rmu_sc0005118.1_g000006 Rmu_sc0005118.1_g000008 Rmu_sc0005227.1_g000012 Rmu_sc0005442.1_g000010 Rmu_sc0005514.1_g000005 Rmu_sc0005996.1_g000014 Rmu_sc0008800.1_g000002 Rmu_sc0008800.1_g000010 Rmu_sc0008800.1_g000014
rosa_roxburghii	Rroxscaffold_1G00065560 Rroxscaffold_2G00102080 Rroxscaffold_2G00102090 Rroxscaffold_2G00102110 Rroxscaffold_2G00114560 Rroxscaffold_2G00114570 Rroxscaffold_2G00114610 Rroxscaffold_2G00114620 Rroxscaffold_2G00114640 Rroxscaffold_2G00114740 Rroxscaffold_2G00114790 Rroxscaffold_2G00115860 Rroxscaffold_2G00124490 Rroxscaffold_4G00302260 Rroxscaffold_4G00302530 Rroxscaffold_4G00302550 Rroxscaffold_4G00302560 Rroxscaffold_4G00302620 Rroxscaffold_6G00421980 Rroxscaffold_7G00187140 Rroxscaffold_7G00187170
rosa_rugosa	Rorug01G0225000 Rorug01G0230200 Rorug02G0220500 Rorug02G0280000 Rorug02G0285200 Rorug02G0285400 Rorug02G0286300 Rorug02G0286300 Rorug02G0286400 Rorug02G0286900 Rorug02G0377800 Rorug02G0377900 Rorug02G0378000 Rorug02G0378000 Rorug02G0378800 Rorug03G0019800 Rorug04G0452700 Rorug06G0140300 Rorug06G0140500 Rorug06G0140600
rosa_samantha	Rh1CG223600 Rh1CG227200 Rh1CG227500 Rh1CG227600 Rh2BG341200 Rh2BG345300 Rh2BG440200 Rh2DG284500 Rh2DG357900 Rh2DG362100 Rh2DG362600 Rh2DG364500 Rh2DG364600 Rh2DG364700 Rh2DG364800 Rh2DG364900 Rh2DG365000 Rh2DG365400 Rh2DG450400 Rh3AG080000 Rh3BG081900 Rh5AG322100 Rh5BG079800 Rh6AG252100 Rh6BG255600
rosa_wichuraiana	Rw1G020770 Rw1G021290 Rw2G022120 Rw2G026940 Rw2G027360 Rw2G027370 Rw2G027950 Rw2G027960 Rw2G027970 Rw2G035220 Rw3G006890 Rw6G021900 Rw6G021930 Rw6G021950 Rw6G021970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	527
AciI	CCGC	1 cut(s)	849
AclWI	GGATC	2 cut(s)	25, 887
AcsI	RAATTY	1 cut(s)	272
AcuI	CTGAAG	4 cut(s)	78, 288, 455, 660
AcyI	GRCGYC	1 cut(s)	130
AfaI	GTAC	3 cut(s)	5, 341, 584
AfiI	CCNNNNNNNGG	2 cut(s)	69, 733
AgsI	TTSAA	7 cut(s)	80, 169, 178, 277, 298, 337, 770
AhlI	ACTAGT	1 cut(s)	490
AluBI	AGCT	5 cut(s)	392, 429, 467, 475, 773
AluI	AGCT	5 cut(s)	392, 429, 467, 475, 773
Alw21I	GWGCWC	1 cut(s)	469
Alw26I	GTCTC	2 cut(s)	152, 499
AlwI	GGATC	2 cut(s)	25, 887
AoxI	GGCC	1 cut(s)	415
ApeKI	GCWGC	2 cut(s)	86, 141
ApoI	RAATTY	1 cut(s)	272
ArsI	GACNNNNNNTTYG	2 cut(s)	225, 257
AspS9I	GGNCC	3 cut(s)	409, 724, 829
AsuHPI	GGTGA	2 cut(s)	548, 935
AsuII	TTCGAA	1 cut(s)	206
AvaII	GGWCC	3 cut(s)	409, 724, 829
BaeGI	GKGCMC	1 cut(s)	914
BanII	GRGCYC	1 cut(s)	469
BbsI	GAAGAC	2 cut(s)	45, 296
Bbv12I	GWGCWC	1 cut(s)	469
BbvCI	CCTCAGC	1 cut(s)	774
BbvI	GCAGC	2 cut(s)	73, 153
BccI	CCATC	2 cut(s)	370, 869
BciVI	GTATCC	2 cut(s)	766, 936
BcoDI	GTCTC	2 cut(s)	152, 499
BcuI	ACTAGT	1 cut(s)	490
BfaI	CTAG	2 cut(s)	371, 491
BfuI	GTATCC	2 cut(s)	766, 936
BisI	GCNGC	2 cut(s)	87, 142
BlsI	GCNGC	2 cut(s)	88, 143
Bme18I	GGWCC	3 cut(s)	409, 724, 829
BmgT120I	GGNCC	3 cut(s)	409, 724, 829
BmiI	GGNNCC	2 cut(s)	360, 454
BmsI	GCATC	1 cut(s)	73
BpiI	GAAGAC	2 cut(s)	45, 296
BpmI	CTGGAG	2 cut(s)	397, 678
Bpu10I	CCTNAGC	1 cut(s)	774
Bpu14I	TTCGAA	1 cut(s)	206
BpuEI	CTTGAG	1 cut(s)	716
Bsa29I	ATCGAT	1 cut(s)	882
BsaHI	GRCGYC	1 cut(s)	130
BsaJI	CCNNGG	2 cut(s)	412, 456
Bsc4I	CCNNNNNNNGG	2 cut(s)	69, 733
Bse118I	RCCGGY	1 cut(s)	689
Bse1I	ACTGG	4 cut(s)	295, 380, 487, 661
Bse3DI	GCAATG	3 cut(s)	116, 198, 981
BseCI	ATCGAT	1 cut(s)	882
BseDI	CCNNGG	2 cut(s)	412, 456
BseGI	GGATG	2 cut(s)	120, 316
BseLI	CCNNNNNNNGG	2 cut(s)	69, 733
BseMI	GCAATG	3 cut(s)	116, 198, 981
BseMII	CTCAG	2 cut(s)	495, 765
BseNI	ACTGG	4 cut(s)	295, 380, 487, 661
BseSI	GKGCMC	1 cut(s)	914
BseXI	GCAGC	2 cut(s)	73, 153
BshFI	GGCC	1 cut(s)	417
BshVI	ATCGAT	1 cut(s)	882
BsiHKAI	GWGCWC	1 cut(s)	469
BsiSI	CCGG	1 cut(s)	690
BslFI	GGGAC	1 cut(s)	299
BslI	CCNNNNNNNGG	2 cut(s)	69, 733
BsmAI	GTCTC	2 cut(s)	152, 499
BsmFI	GGGAC	1 cut(s)	299
BsmI	GAATGC	1 cut(s)	765
BsnI	GGCC	1 cut(s)	417
Bsp119I	TTCGAA	1 cut(s)	206
Bsp1286I	GDGCHC	2 cut(s)	469, 914
Bsp143I	GATC	2 cut(s)	30, 879
BspACI	CCGC	1 cut(s)	849
BspANI	GGCC	1 cut(s)	417
BspCNI	CTCAG	2 cut(s)	496, 766
BspDI	ATCGAT	1 cut(s)	882
BspLI	GGNNCC	2 cut(s)	360, 454
BspPI	GGATC	2 cut(s)	25, 887
BspQI	GCTCTTC	1 cut(s)	474
BspT104I	TTCGAA	1 cut(s)	206
BsrDI	GCAATG	3 cut(s)	116, 198, 981
BsrFI	RCCGGY	1 cut(s)	689
BsrI	ACTGG	4 cut(s)	295, 380, 487, 661
BssAI	RCCGGY	1 cut(s)	689
BssECI	CCNNGG	2 cut(s)	412, 456
BssMI	GATC	2 cut(s)	30, 879
BssNI	GRCGYC	1 cut(s)	130
BssT1I	CCWWGG	2 cut(s)	412, 456
Bst4CI	ACNGT	4 cut(s)	448, 524, 716, 1009
Bst6I	CTCTTC	1 cut(s)	474
BstACI	GRCGYC	1 cut(s)	130
BstBI	TTCGAA	1 cut(s)	206
BstC8I	GCNNGC	1 cut(s)	477
BstDEI	CTNAG	2 cut(s)	504, 774
BstENI	CCTNNNNNAGG	1 cut(s)	731
BstF5I	GGATG	2 cut(s)	120, 316
BstKTI	GATC	2 cut(s)	33, 882
BstMAI	GTCTC	2 cut(s)	152, 499
BstMBI	GATC	2 cut(s)	30, 879
BstMWI	GCNNNNNNNGC	4 cut(s)	138, 690, 992, 1001
BstSLI	GKGCMC	1 cut(s)	914
BstV1I	GCAGC	2 cut(s)	73, 153
BstV2I	GAAGAC	2 cut(s)	45, 296
BstXI	CCANNNNNNTGG	1 cut(s)	290
Bsu15I	ATCGAT	1 cut(s)	882
BsuI	GTATCC	2 cut(s)	766, 936
BsuRI	GGCC	1 cut(s)	417
BsuTUI	ATCGAT	1 cut(s)	882
BtsCI	GGATG	2 cut(s)	120, 316
BtsIMutI	CAGTG	2 cut(s)	453, 721
Cac8I	GCNNGC	1 cut(s)	477
Cfr10I	RCCGGY	1 cut(s)	689
Cfr13I	GGNCC	3 cut(s)	409, 724, 829
ClaI	ATCGAT	1 cut(s)	882
CseI	GACGC	2 cut(s)	138, 229
Csp6I	GTAC	3 cut(s)	4, 340, 583
CviAII	CATG	4 cut(s)	91, 145, 355, 906
CviQI	GTAC	3 cut(s)	4, 340, 583
DdeI	CTNAG	2 cut(s)	504, 774
DpnI	GATC	2 cut(s)	32, 881
DpnII	GATC	2 cut(s)	30, 879
DrdI	GACNNNNNNGTC	1 cut(s)	527
DseDI	GACNNNNNNGTC	1 cut(s)	527
Eam1104I	CTCTTC	1 cut(s)	474
EarI	CTCTTC	1 cut(s)	474
Ecl136II	GAGCTC	1 cut(s)	467
Eco130I	CCWWGG	2 cut(s)	412, 456
Eco24I	GRGCYC	1 cut(s)	469
Eco47I	GGWCC	3 cut(s)	409, 724, 829
Eco53kI	GAGCTC	1 cut(s)	467
Eco57I	CTGAAG	4 cut(s)	78, 288, 455, 660
EcoICRI	GAGCTC	1 cut(s)	467
EcoNI	CCTNNNNNAGG	1 cut(s)	731
EcoO109I	RGGNCCY	1 cut(s)	724
EcoRI	GAATTC	1 cut(s)	272
EcoT14I	CCWWGG	2 cut(s)	412, 456
EcoT38I	GRGCYC	1 cut(s)	469
ErhI	CCWWGG	2 cut(s)	412, 456
FaeI	CATG	4 cut(s)	94, 148, 358, 909
FalI	AAGNNNNNCTT	2 cut(s)	453, 485
FaqI	GGGAC	1 cut(s)	299
FatI	CATG	4 cut(s)	90, 144, 354, 905
Fnu4HI	GCNGC	2 cut(s)	87, 142
FokI	GGATG	2 cut(s)	127, 323
FriOI	GRGCYC	1 cut(s)	469
Fsp4HI	GCNGC	2 cut(s)	87, 142
FspBI	CTAG	2 cut(s)	371, 491
GluI	GCNGC	2 cut(s)	87, 142
GsuI	CTGGAG	2 cut(s)	397, 678
HaeIII	GGCC	1 cut(s)	417
HapII	CCGG	1 cut(s)	690
HgaI	GACGC	2 cut(s)	138, 229
Hin1I	GRCGYC	1 cut(s)	130
Hin1II	CATG	4 cut(s)	94, 148, 358, 909
HincII	GTYRAC	1 cut(s)	520
HindII	GTYRAC	1 cut(s)	520
HinfI	GANTC	5 cut(s)	73, 118, 160, 200, 294
HpaII	CCGG	1 cut(s)	690
HphI	GGTGA	2 cut(s)	548, 935
Hpy166II	GTNNAC	5 cut(s)	220, 488, 520, 712, 719
Hpy188I	TCNGA	4 cut(s)	58, 72, 505, 533
Hpy188III	TCNNGA	3 cut(s)	77, 178, 308
Hpy8I	GTNNAC	5 cut(s)	220, 488, 520, 712, 719
Hpy99I	CGWCG	2 cut(s)	533, 572
HpyAV	CCTTC	8 cut(s)	148, 455, 539, 548, 684, 737, 923, 962
HpyCH4III	ACNGT	4 cut(s)	448, 524, 716, 1009
HpyCH4IV	ACGT	4 cut(s)	528, 570, 936, 989
HpyCH4V	TGCA	3 cut(s)	254, 651, 765
HpyF10VI	GCNNNNNNNGC	4 cut(s)	138, 690, 992, 1001
HpyF3I	CTNAG	2 cut(s)	504, 774
HpySE526I	ACGT	4 cut(s)	528, 570, 936, 989
Hsp92I	GRCGYC	1 cut(s)	130
Hsp92II	CATG	4 cut(s)	94, 148, 358, 909
Kzo9I	GATC	2 cut(s)	30, 879
LguI	GCTCTTC	1 cut(s)	474
LmnI	GCTCC	3 cut(s)	389, 452, 464
Lsp1109I	GCAGC	2 cut(s)	73, 153
LweI	GCATC	1 cut(s)	73
MaeI	CTAG	2 cut(s)	371, 491
MaeII	ACGT	4 cut(s)	528, 570, 936, 989
MaeIII	GTNAC	3 cut(s)	524, 844, 857
MalI	GATC	2 cut(s)	32, 881
MboI	GATC	2 cut(s)	30, 879
MboII	GAAGA	9 cut(s)	45, 92, 195, 281, 296, 357, 461, 710, 938
MhlI	GDGCHC	2 cut(s)	469, 914
MluCI	AATT	4 cut(s)	233, 248, 272, 619
MlyI	GAGTC	2 cut(s)	112, 154
MmeI	TCCRAC	1 cut(s)	511
MnlI	CCTC	9 cut(s)	44, 76, 527, 607, 655, 769, 842, 952, 1006
MspI	CCGG	1 cut(s)	690
Mva1269I	GAATGC	1 cut(s)	765
MwoI	GCNNNNNNNGC	4 cut(s)	138, 690, 992, 1001
NdeII	GATC	2 cut(s)	30, 879
NlaIII	CATG	4 cut(s)	94, 148, 358, 909
NlaIV	GGNNCC	2 cut(s)	360, 454
NspV	TTCGAA	1 cut(s)	206
PciSI	GCTCTTC	1 cut(s)	474
PctI	GAATGC	1 cut(s)	765
PfeI	GAWTC	3 cut(s)	73, 200, 294
PkrI	GCNGC	2 cut(s)	88, 143
PleI	GAGTC	2 cut(s)	112, 154
PpsI	GAGTC	2 cut(s)	112, 154
PpuMI	RGGWCCY	1 cut(s)	724
Psp124BI	GAGCTC	1 cut(s)	469
Psp5II	RGGWCCY	1 cut(s)	724
PspN4I	GGNNCC	2 cut(s)	360, 454
PspPI	GGNCC	3 cut(s)	409, 724, 829
PspPPI	RGGWCCY	1 cut(s)	724
RsaI	GTAC	3 cut(s)	5, 341, 584
RsaNI	GTAC	3 cut(s)	4, 340, 583
SacI	GAGCTC	1 cut(s)	469
SapI	GCTCTTC	1 cut(s)	474
SatI	GCNGC	2 cut(s)	87, 142
Sau3AI	GATC	2 cut(s)	30, 879
Sau96I	GGNCC	3 cut(s)	409, 724, 829
SchI	GAGTC	2 cut(s)	112, 154
SduI	GDGCHC	2 cut(s)	469, 914
SfaNI	GCATC	1 cut(s)	73
SfuI	TTCGAA	1 cut(s)	206
SinI	GGWCC	3 cut(s)	409, 724, 829
SmlI	CTYRAG	1 cut(s)	731
SmoI	CTYRAG	1 cut(s)	731
SpeI	ACTAGT	1 cut(s)	490
Sse9I	AATT	4 cut(s)	233, 248, 272, 619
SsiI	CCGC	1 cut(s)	849
SspMI	CTAG	2 cut(s)	371, 491
SstI	GAGCTC	1 cut(s)	469
StyI	CCWWGG	2 cut(s)	412, 456
TaaI	ACNGT	4 cut(s)	448, 524, 716, 1009
TaiI	ACGT	4 cut(s)	531, 573, 939, 992
TaqI	TCGA	3 cut(s)	206, 834, 882
TasI	AATT	4 cut(s)	233, 248, 272, 619
TatI	WGTACW	2 cut(s)	3, 582
TfiI	GAWTC	3 cut(s)	73, 200, 294
TscAI	CASTG	2 cut(s)	453, 721
TseI	GCWGC	2 cut(s)	86, 141
TspDTI	ATGAA	3 cut(s)	161, 558, 786
TspGWI	ACGGA	3 cut(s)	748, 842, 876
TspRI	CASTG	2 cut(s)	453, 721
VpaK11BI	GGWCC	3 cut(s)	409, 724, 829
XagI	CCTNNNNNAGG	1 cut(s)	731
XapI	RAATTY	1 cut(s)	272
XcmI	CCANNNNNNNNNTGG	1 cut(s)	419
XspI	CTAG	2 cut(s)	371, 491

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.