Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0000141

Physical Location & Seq

Genomic Coordinates Reverse (-)

34168453 .. 34170274

Gene Structure 1822 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g40500.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1023 bp

ATGGAGTTCACCAACAAGAGCAAATGTATCTGCTTGGCCTTGGTCCTCATGTTAGGGGCTTGGTCTTCGGAAGCCACTTCTCGTAGTCTCCAAGATGCATTAGCTTATGGGAGGTACGAGCAATGGATAGCTCGTTATAGACGTGTGTATAAGGATGTCAACGAGAAGGAGGATCACTTCAAGATATTCAAGGAGAATGAGGCATATGTGGAATCTTCCAACAAAGATGGAAACAAACTTTACAAATTGAGTCTGAACCAATTTGCAGACCTTACAAATGAGGAGTTCACTACCTCAAGAAATCGATTCTTGGGGCACGAGTGTTCCACCAAGACCACTACTTTCAAGTACGAAAATGCTACTGTGCCGGCTACAATGGACTGGAGAAAGAAGGGAGCTGTGACTCCAGTGAAGGACCAAGGCCAATGTGGAAGTTGTTGGGCCTTCTCAGCAGTGGCAGCTATGGAAGGAATCACTCAGCTTACAACTGGTAAACTAATCTCTTTGTCTGAGCAAGAGCTAGTTGACTGTGATGTCAATGGTGTTGACCAAGGTTGTTCAGGTGGCGAAATGGATGATGCCTTTAAGTTTGTCATTCAAAATCATGGTATTAATACCGAGGCTAATTATCCCTACACGGCTGCTGATGGTACATGCAATGCCAAAAAGGAAGCAGGCCATGCAGCCACAATAACTGGCCACGAAGATGTGCCTGCAAACAGCGAAAGCGCCCTTCTTAAGGCCGTGGCTAATCAGCCAATTGCTGTTGCCATTGATGCTAGTGGATTTGACTTCCAGTTATATTCAAGTGGTGTTTTCACAGGAACATGTGGAACTGAACTAGACCATGGTGTTACCGCTGTTGGATATGGCGTGGATGCTGATGGAACTAAGTACTGGTTGGTAAAGAACTCATGGGGTGCACAATGGGGTGAAGAAGGTTACATCAGAATGCAAAGAGATGTTGCTGCACCTGAAGGTCTATGCGGCATTGCCATGGATGCCTCTTACCCCACTGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000323 GO:0000325 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009505 GO:0009555 GO:0009605 GO:0009607 GO:0009620 GO:0009626 GO:0009791 GO:0009908 GO:0009987 GO:0010623 GO:0012501 GO:0012505 GO:0016787 GO:0019538 GO:0022414 GO:0030154 GO:0030163 GO:0030312 GO:0032501 GO:0032502 GO:0033554 GO:0034050 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048468 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050832 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0070011 GO:0071704 GO:0071944 GO:0090567 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I29 Peptidase_C1

Protein Analysis

341

Amino Acids

37.12

Weight (kDa)

4.93

Isoelectric Point (pI)

20.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I29	PF08246	39 - 96	1.8e-15	Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1	PF00112	122 - 339	2.9e-84	Papain family cysteine protease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22160
fragaria_vesca	FvH4_1g23580 FvH4_1g25982 FvH4_2g17070 FvH4_3g40500 FvH4_6g27180 FvH4_6g27320 FvH4_6g33300 FvH4_6g33310 FvH4_7g09480 FvH4_7g13000 FvH4_7g13320 FvH4_7g13600
malus_domestica	MD00G1208000.v1.1 MD09G1238200.v1.1 MD09G1238600.v1.1 MD09G1238800.v1.1 MD09G1239100.v1.1 MD16G1226900.v1.1 MD16G1242700.v1.1 MD16G1244200.v1.1 MD16G1245500.v1.1 MD16G1245800.v1.1 MD17G1231600.v1.1 MD17G1231700.v1.1 MD17G1231800.v1.1 MD17G1232200.v1.1 MD17G1232300.v1.1 MD17G1232400.v1.1
prunus_persica	Prupe.1G072300_v2.0.a1 Prupe.1G072400_v2.0.a1 Prupe.3G106300_v2.0.a1 Prupe.3G106400_v2.0.a1 Prupe.3G119400_v2.0.a1 Prupe.3G120600_v2.0.a1 Prupe.3G121900_v2.0.a1 Prupe.3G122000_v2.0.a1 Prupe.3G122100_v2.0.a1 Prupe.3G122200_v2.0.a1 Prupe.3G122700_v2.0.a1 Prupe.5G055900_v2.0.a1 Prupe.5G056500_v2.0.a1
pyrus_communis	pycom09g15770 pycom09g15780 pycom09g15790 pycom16g20640 pycom17g18390
rosa_chinensis	RchiOBHm_Chr1g0352141 RchiOBHm_Chr1g0352581 RchiOBHm_Chr1g0352601 RchiOBHm_Chr1g0352621 RchiOBHm_Chr1g0352631 RchiOBHm_Chr2g0119131 RchiOBHm_Chr2g0128691 RchiOBHm_Chr2g0128701 RchiOBHm_Chr2g0129151 RchiOBHm_Chr2g0129221 RchiOBHm_Chr2g0129401 RchiOBHm_Chr2g0129421 RchiOBHm_Chr2g0129431 RchiOBHm_Chr2g0129471 RchiOBHm_Chr2g0129481 RchiOBHm_Chr2g0129491 RchiOBHm_Chr2g0143051 RchiOBHm_Chr2g0143121 RchiOBHm_Chr2g0143171 RchiOBHm_Chr3g0457341 RchiOBHm_Chr5g0049011 RchiOBHm_Chr6g0281281 RchiOBHm_Chr6g0281311
rosa_laevigata	RLG00000012975 RLG00000012976 RLG00000012979 RLG00000018447 RLG00000019018 RLG00000019061 RLG00000019066 RLG00000019078 RLG00000019079 RLG00000019080 RLG00000019083 RLG00000019085 RLG00000020009 RLG00000020010 RLG00000025234 RLG00000028326 RLG00000028327 RLG00000028328 RLG00000028329 RLG00000028357 RLG00000031784
rosa_multiflora	Rmu_co8169188.1_g000001 Rmu_co8261007.1_g000001 Rmu_co8314361.1_g000001 Rmu_sc0000109.1_g000014 Rmu_sc0000638.1_g000020 Rmu_sc0000847.1_g000020 Rmu_sc0000847.1_g000028 Rmu_sc0000847.1_g000037 Rmu_sc0000847.1_g000046 Rmu_sc0000911.1_g000034 Rmu_sc0000999.1_g000021 Rmu_sc0001171.1_g000013 Rmu_sc0001171.1_g000018 Rmu_sc0001171.1_g000019 Rmu_sc0001653.1_g000004 Rmu_sc0002277.1_g000005 Rmu_sc0003479.1_g000001 Rmu_sc0005118.1_g000006 Rmu_sc0005118.1_g000008 Rmu_sc0005227.1_g000012 Rmu_sc0005442.1_g000010 Rmu_sc0005514.1_g000005 Rmu_sc0005996.1_g000014 Rmu_sc0008800.1_g000002 Rmu_sc0008800.1_g000010 Rmu_sc0008800.1_g000014
rosa_roxburghii	Rroxscaffold_1G00065560 Rroxscaffold_2G00102080 Rroxscaffold_2G00102090 Rroxscaffold_2G00102110 Rroxscaffold_2G00114560 Rroxscaffold_2G00114570 Rroxscaffold_2G00114610 Rroxscaffold_2G00114620 Rroxscaffold_2G00114640 Rroxscaffold_2G00114740 Rroxscaffold_2G00114790 Rroxscaffold_2G00115860 Rroxscaffold_2G00124490 Rroxscaffold_4G00302260 Rroxscaffold_4G00302530 Rroxscaffold_4G00302550 Rroxscaffold_4G00302560 Rroxscaffold_4G00302620 Rroxscaffold_6G00421980 Rroxscaffold_7G00187140 Rroxscaffold_7G00187170
rosa_rugosa	Rorug01G0225000 Rorug01G0230200 Rorug02G0220500 Rorug02G0280000 Rorug02G0285200 Rorug02G0285400 Rorug02G0286300 Rorug02G0286300 Rorug02G0286400 Rorug02G0286900 Rorug02G0377800 Rorug02G0377900 Rorug02G0378000 Rorug02G0378000 Rorug02G0378800 Rorug03G0019800 Rorug04G0452700 Rorug06G0140300 Rorug06G0140500 Rorug06G0140600
rosa_samantha	Rh1CG223600 Rh1CG227200 Rh1CG227500 Rh1CG227600 Rh2BG341200 Rh2BG345300 Rh2BG440200 Rh2DG284500 Rh2DG357900 Rh2DG362100 Rh2DG362600 Rh2DG364500 Rh2DG364600 Rh2DG364700 Rh2DG364800 Rh2DG364900 Rh2DG365000 Rh2DG365400 Rh2DG450400 Rh3AG080000 Rh3BG081900 Rh5AG322100 Rh5BG079800 Rh6AG252100 Rh6BG255600
rosa_wichuraiana	Rw1G020770 Rw1G021290 Rw2G022120 Rw2G026940 Rw2G027360 Rw2G027370 Rw2G027950 Rw2G027960 Rw2G027970 Rw2G035220 Rw3G006890 Rw6G021900 Rw6G021930 Rw6G021950 Rw6G021970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	533
AciI	CCGC	2 cut(s)	858, 987
AclWI	GGATC	1 cut(s)	180
AcoI	YGGCCR	1 cut(s)	697
AcuI	CTGAAG	1 cut(s)	996
AfaI	GTAC	4 cut(s)	116, 350, 652, 896
AfiI	CCNNNNNNNGG	1 cut(s)	739
AflII	CTTAAG	1 cut(s)	737
AflIII	ACRYGT	2 cut(s)	142, 827
AgsI	TTSAA	5 cut(s)	181, 190, 346, 599, 807
AjiI	CACGTC	1 cut(s)	143
AluBI	AGCT	6 cut(s)	104, 131, 398, 461, 481, 520
AluI	AGCT	6 cut(s)	104, 131, 398, 461, 481, 520
Alw21I	GWGCWC	1 cut(s)	925
Alw26I	GTCTC	1 cut(s)	92
Alw44I	GTGCAC	1 cut(s)	921
AlwI	GGATC	1 cut(s)	180
AoxI	GGCC	6 cut(s)	36, 421, 441, 676, 697, 741
ApaLI	GTGCAC	1 cut(s)	921
ApeKI	GCWGC	4 cut(s)	458, 641, 683, 968
AseI	ATTAAT	1 cut(s)	612
AspLEI	GCGC	1 cut(s)	731
AspS9I	GGNCC	3 cut(s)	43, 415, 441
AsuHPI	GGTGA	1 cut(s)	944
AvaII	GGWCC	2 cut(s)	43, 415
BaeGI	GKGCMC	2 cut(s)	318, 925
BalI	TGGCCA	1 cut(s)	699
BauI	CACGAG	1 cut(s)	317
BbsI	GAAGAC	1 cut(s)	57
Bbv12I	GWGCWC	1 cut(s)	925
BbvI	GCAGC	4 cut(s)	470, 628, 695, 955
BccI	CCATC	3 cut(s)	221, 641, 878
BceAI	ACGGC	2 cut(s)	654, 728
BcoDI	GTCTC	1 cut(s)	92
BfaI	CTAG	3 cut(s)	521, 780, 842
BfoI	RGCGCY	1 cut(s)	732
BfrI	CTTAAG	1 cut(s)	737
BisI	GCNGC	5 cut(s)	459, 642, 684, 969, 988
BlsI	GCNGC	5 cut(s)	460, 643, 685, 970, 989
BmcAI	AGTACT	1 cut(s)	896
Bme18I	GGWCC	2 cut(s)	43, 415
BmgBI	CACGTC	1 cut(s)	143
BmgT120I	GGNCC	3 cut(s)	43, 415, 441
BmsI	GCATC	5 cut(s)	85, 568, 766, 868, 991
BpiI	GAAGAC	1 cut(s)	57
BpmI	CTGGAG	2 cut(s)	390, 403
BpuEI	CTTGAG	1 cut(s)	280
Bsa29I	ATCGAT	1 cut(s)	304
BsaJI	CCNNGG	7 cut(s)	39, 418, 550, 618, 744, 847, 996
Bsc4I	CCNNNNNNNGG	1 cut(s)	739
Bse118I	RCCGGY	1 cut(s)	367
Bse1I	ACTGG	6 cut(s)	386, 407, 493, 700, 796, 902
Bse3DI	GCAATG	3 cut(s)	128, 664, 990
BseCI	ATCGAT	1 cut(s)	304
BseDI	CCNNGG	7 cut(s)	39, 418, 550, 618, 744, 847, 996
BseGI	GGATG	4 cut(s)	160, 580, 883, 1006
BseLI	CCNNNNNNNGG	1 cut(s)	739
BseMI	GCAATG	3 cut(s)	128, 664, 990
BseMII	CTCAG	3 cut(s)	462, 491, 501
BseNI	ACTGG	6 cut(s)	386, 407, 493, 700, 796, 902
BseRI	GAGGAG	1 cut(s)	296
BseSI	GKGCMC	2 cut(s)	318, 925
BseXI	GCAGC	4 cut(s)	470, 628, 695, 955
BsgI	GTGCAG	1 cut(s)	954
BshFI	GGCC	6 cut(s)	38, 423, 443, 678, 699, 743
BshVI	ATCGAT	1 cut(s)	304
BsiHKAI	GWGCWC	1 cut(s)	925
BsiSI	CCGG	1 cut(s)	368
BslI	CCNNNNNNNGG	1 cut(s)	739
BsmAI	GTCTC	1 cut(s)	92
BsmI	GAATGC	1 cut(s)	957
BsnI	GGCC	6 cut(s)	38, 423, 443, 678, 699, 743
Bsp1286I	GDGCHC	2 cut(s)	318, 925
Bsp143I	GATC	1 cut(s)	172
Bsp19I	CCATGG	2 cut(s)	847, 996
BspACI	CCGC	2 cut(s)	858, 987
BspANI	GGCC	6 cut(s)	38, 423, 443, 678, 699, 743
BspCNI	CTCAG	3 cut(s)	461, 490, 502
BspDI	ATCGAT	1 cut(s)	304
BspPI	GGATC	1 cut(s)	180
BspTI	CTTAAG	1 cut(s)	737
BsrDI	GCAATG	3 cut(s)	128, 664, 990
BsrFI	RCCGGY	1 cut(s)	367
BsrI	ACTGG	6 cut(s)	386, 407, 493, 700, 796, 902
BssAI	RCCGGY	1 cut(s)	367
BssECI	CCNNGG	7 cut(s)	39, 418, 550, 618, 744, 847, 996
BssMI	GATC	1 cut(s)	172
BssSI	CACGAG	1 cut(s)	317
BssT1I	CCWWGG	5 cut(s)	39, 418, 550, 847, 996
Bst2BI	CACGAG	1 cut(s)	317
Bst4CI	ACNGT	2 cut(s)	364, 530
BstAFI	CTTAAG	1 cut(s)	737
BstAPI	GCANNNNNTGC	1 cut(s)	680
BstC8I	GCNNGC	3 cut(s)	369, 676, 714
BstDEI	CTNAG	4 cut(s)	448, 477, 510, 891
BstDSI	CCRYGG	3 cut(s)	744, 847, 996
BstENI	CCTNNNNNAGG	1 cut(s)	737
BstF5I	GGATG	4 cut(s)	160, 580, 883, 1006
BstH2I	RGCGCY	1 cut(s)	732
BstHHI	GCGC	1 cut(s)	731
BstKTI	GATC	1 cut(s)	175
BstMAI	GTCTC	1 cut(s)	92
BstMBI	GATC	1 cut(s)	172
BstMWI	GCNNNNNNNGC	5 cut(s)	449, 458, 680, 776, 1001
BstNSI	RCATGY	2 cut(s)	657, 831
BstSLI	GKGCMC	2 cut(s)	318, 925
BstV1I	GCAGC	4 cut(s)	470, 628, 695, 955
BstV2I	GAAGAC	1 cut(s)	57
Bsu15I	ATCGAT	1 cut(s)	304
BsuRI	GGCC	6 cut(s)	38, 423, 443, 678, 699, 743
BsuTUI	ATCGAT	1 cut(s)	304
BtgI	CCRYGG	3 cut(s)	744, 847, 996
BtrI	CACGTC	1 cut(s)	143
BtsCI	GGATG	4 cut(s)	160, 580, 883, 1006
BtsI	GCAGTG	2 cut(s)	459, 1014
BtsIMutI	CAGTG	3 cut(s)	414, 459, 1014
Cac8I	GCNNGC	3 cut(s)	369, 676, 714
CfoI	GCGC	1 cut(s)	731
Cfr10I	RCCGGY	1 cut(s)	367
Cfr13I	GGNCC	3 cut(s)	43, 415, 441
ClaI	ATCGAT	1 cut(s)	304
Csp6I	GTAC	4 cut(s)	115, 349, 651, 895
CviAII	CATG	8 cut(s)	49, 605, 654, 680, 828, 848, 915, 997
CviQI	GTAC	4 cut(s)	115, 349, 651, 895
DdeI	CTNAG	4 cut(s)	448, 477, 510, 891
DpnI	GATC	1 cut(s)	174
DpnII	GATC	1 cut(s)	172
DrdI	GACNNNNNNGTC	1 cut(s)	533
DseDI	GACNNNNNNGTC	1 cut(s)	533
EaeI	YGGCCR	1 cut(s)	697
Eco130I	CCWWGG	5 cut(s)	39, 418, 550, 847, 996
Eco47I	GGWCC	2 cut(s)	43, 415
Eco57I	CTGAAG	1 cut(s)	996
EcoNI	CCTNNNNNAGG	1 cut(s)	737
EcoT14I	CCWWGG	5 cut(s)	39, 418, 550, 847, 996
EcoT22I	ATGCAT	1 cut(s)	100
ErhI	CCWWGG	5 cut(s)	39, 418, 550, 847, 996
FaeI	CATG	8 cut(s)	52, 608, 657, 683, 831, 851, 918, 1000
FatI	CATG	8 cut(s)	48, 604, 653, 679, 827, 847, 914, 996
FauNDI	CATATG	1 cut(s)	205
Fnu4HI	GCNGC	5 cut(s)	459, 642, 684, 969, 988
FokI	GGATG	4 cut(s)	167, 587, 890, 1013
Fsp4HI	GCNGC	5 cut(s)	459, 642, 684, 969, 988
FspBI	CTAG	3 cut(s)	521, 780, 842
GlaI	GCGC	1 cut(s)	730
GluI	GCNGC	5 cut(s)	459, 642, 684, 969, 988
GsuI	CTGGAG	2 cut(s)	390, 403
HaeII	RGCGCY	1 cut(s)	732
HaeIII	GGCC	6 cut(s)	38, 423, 443, 678, 699, 743
HapII	CCGG	1 cut(s)	368
HhaI	GCGC	1 cut(s)	731
Hin1II	CATG	8 cut(s)	52, 608, 657, 683, 831, 851, 918, 1000
Hin6I	GCGC	1 cut(s)	729
HinP1I	GCGC	1 cut(s)	729
HincII	GTYRAC	3 cut(s)	160, 526, 547
HindII	GTYRAC	3 cut(s)	160, 526, 547
HinfI	GANTC	5 cut(s)	212, 250, 306, 403, 471
HpaII	CCGG	1 cut(s)	368
HphI	GGTGA	1 cut(s)	944
Hpy166II	GTNNAC	7 cut(s)	9, 160, 288, 494, 526, 547, 923
Hpy188I	TCNGA	4 cut(s)	70, 255, 511, 950
Hpy188III	TCNNGA	2 cut(s)	181, 297
Hpy8I	GTNNAC	7 cut(s)	9, 160, 288, 494, 526, 547, 923
HpyAV	CCTTC	8 cut(s)	160, 385, 406, 454, 461, 743, 932, 971
HpyCH4III	ACNGT	2 cut(s)	364, 530
HpyCH4IV	ACGT	1 cut(s)	142
HpyCH4V	TGCA	9 cut(s)	98, 266, 657, 683, 716, 923, 955, 971, 1019
HpyF10VI	GCNNNNNNNGC	5 cut(s)	449, 458, 680, 776, 1001
HpyF3I	CTNAG	4 cut(s)	448, 477, 510, 891
HpySE526I	ACGT	1 cut(s)	142
Hsp92II	CATG	8 cut(s)	52, 608, 657, 683, 831, 851, 918, 1000
HspAI	GCGC	1 cut(s)	729
KroI	GCCGGC	1 cut(s)	367
KroNI	GCCGGC	1 cut(s)	369
Kzo9I	GATC	1 cut(s)	172
LmnI	GCTCC	1 cut(s)	395
Lsp1109I	GCAGC	4 cut(s)	470, 628, 695, 955
LweI	GCATC	5 cut(s)	85, 568, 766, 868, 991
MaeI	CTAG	3 cut(s)	521, 780, 842
MaeII	ACGT	1 cut(s)	142
MaeIII	GTNAC	3 cut(s)	400, 853, 941
MalI	GATC	1 cut(s)	174
MboI	GATC	1 cut(s)	172
MboII	GAAGA	4 cut(s)	57, 207, 716, 947
MfeI	CAATTG	1 cut(s)	759
MhlI	GDGCHC	2 cut(s)	318, 925
MlsI	TGGCCA	1 cut(s)	699
MluCI	AATT	4 cut(s)	245, 260, 625, 759
MluNI	TGGCCA	1 cut(s)	699
MlyI	GAGTC	2 cut(s)	259, 397
MmeI	TCCRAC	2 cut(s)	243, 844
MnlI	CCTC	8 cut(s)	56, 105, 163, 193, 274, 304, 613, 1015
Mox20I	TGGCCA	1 cut(s)	699
Mph1103I	ATGCAT	1 cut(s)	100
MroNI	GCCGGC	1 cut(s)	367
MscI	TGGCCA	1 cut(s)	699
MseI	TTAA	3 cut(s)	585, 612, 738
MslI	CAYNNNNRTG	3 cut(s)	705, 950, 995
Msp20I	TGGCCA	1 cut(s)	699
MspA1I	CMGCKG	1 cut(s)	860
MspCI	CTTAAG	1 cut(s)	737
MspI	CCGG	1 cut(s)	368
MunI	CAATTG	1 cut(s)	759
Mva1269I	GAATGC	1 cut(s)	957
MwoI	GCNNNNNNNGC	5 cut(s)	449, 458, 680, 776, 1001
NaeI	GCCGGC	1 cut(s)	369
NcoI	CCATGG	2 cut(s)	847, 996
NdeI	CATATG	1 cut(s)	205
NdeII	GATC	1 cut(s)	172
NgoMIV	GCCGGC	1 cut(s)	367
NlaIII	CATG	8 cut(s)	52, 608, 657, 683, 831, 851, 918, 1000
NmuCI	GTSAC	1 cut(s)	400
NsiI	ATGCAT	1 cut(s)	100
NspI	RCATGY	2 cut(s)	657, 831
PciI	ACATGT	1 cut(s)	827
PcsI	WCGNNNNNNNCGW	1 cut(s)	139
PctI	GAATGC	1 cut(s)	957
PdiI	GCCGGC	1 cut(s)	369
PfeI	GAWTC	3 cut(s)	212, 306, 471
PkrI	GCNGC	5 cut(s)	460, 643, 685, 970, 989
PleI	GAGTC	2 cut(s)	258, 397
PpsI	GAGTC	2 cut(s)	258, 397
PscI	ACATGT	1 cut(s)	827
PshBI	ATTAAT	1 cut(s)	612
PspPI	GGNCC	3 cut(s)	43, 415, 441
RsaI	GTAC	4 cut(s)	116, 350, 652, 896
RsaNI	GTAC	4 cut(s)	115, 349, 651, 895
RseI	CAYNNNNRTG	3 cut(s)	705, 950, 995
SaqAI	TTAA	3 cut(s)	585, 612, 738
SatI	GCNGC	5 cut(s)	459, 642, 684, 969, 988
Sau3AI	GATC	1 cut(s)	172
Sau96I	GGNCC	3 cut(s)	43, 415, 441
ScaI	AGTACT	1 cut(s)	896
SchI	GAGTC	2 cut(s)	259, 397
SduI	GDGCHC	2 cut(s)	318, 925
SfaNI	GCATC	5 cut(s)	85, 568, 766, 868, 991
SinI	GGWCC	2 cut(s)	43, 415
SmiMI	CAYNNNNRTG	3 cut(s)	705, 950, 995
SmlI	CTYRAG	2 cut(s)	295, 737
SmoI	CTYRAG	2 cut(s)	295, 737
Sse9I	AATT	4 cut(s)	245, 260, 625, 759
SsiI	CCGC	2 cut(s)	858, 987
SspMI	CTAG	3 cut(s)	521, 780, 842
StyI	CCWWGG	5 cut(s)	39, 418, 550, 847, 996
TaaI	ACNGT	2 cut(s)	364, 530
TaiI	ACGT	1 cut(s)	145
TaqI	TCGA	1 cut(s)	304
TasI	AATT	4 cut(s)	245, 260, 625, 759
TatI	WGTACW	1 cut(s)	894
TauI	GCSGC	1 cut(s)	990
TfiI	GAWTC	3 cut(s)	212, 306, 471
Tru1I	TTAA	3 cut(s)	585, 612, 738
Tru9I	TTAA	3 cut(s)	585, 612, 738
TscAI	CASTG	3 cut(s)	414, 459, 1021
TseFI	GTSAC	1 cut(s)	400
TseI	GCWGC	4 cut(s)	458, 641, 683, 968
Tsp45I	GTSAC	1 cut(s)	400
TspRI	CASTG	3 cut(s)	414, 459, 1021
Vha464I	CTTAAG	1 cut(s)	737
VneI	GTGCAC	1 cut(s)	921
VpaK11BI	GGWCC	2 cut(s)	43, 415
VspI	ATTAAT	1 cut(s)	612
XagI	CCTNNNNNAGG	1 cut(s)	737
XceI	RCATGY	2 cut(s)	657, 831
XcmI	CCANNNNNNNNNTGG	1 cut(s)	425
XspI	CTAG	3 cut(s)	521, 780, 842
ZrmI	AGTACT	1 cut(s)	896
Zsp2I	ATGCAT	1 cut(s)	100

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.