Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0000141

Physical Location & Seq

Genomic Coordinates Forward (+)

22892618 .. 22893794

Gene Structure 1177 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00302530.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 999 bp

ATGGAGTTCACCAACCAGAGCAAATGTATCTGCTTGGCCTTGGTCCTCATGTTGGGGGCTTGGTCTTCCGAAGCCACTTCTCGTAGTTTCAACGATGCATTTGCTTATGGGAGGTATGAGCAATGGATGGCTCGTTACGGACGTGTGTATAATGGTATCAAAGAGAAGGAGGATCGCTTCAACATATTCAAGGAGAATGAGGCATTTATAGAATCTTCCAATAACGATGGAAACAAACTTTACAAGTTGAGTTTGAACCAATTTGCAGATCTTACAAATGAAGAGTTCATTGCCTCAAGAAATCGATTCAAGGGGCACGAATGTTCCACGAAGACCACTACTTTCAAGTACGAAAATGCTACTGTGCCGGCTACAATGGACTGGAGAAAGAAGGGGGCTGTAACTCCCGTCAAGGACCAAGGCCAATGTGTGGGTGCTATGGAAGGAATCACTCAAATTACAACTGGTAAACTAATCTCTTTGTCTGAGCAAGAGCTGGTTGACTGTGATGTCCAAGGTGAAGACCAAGGCTGTTCAGGTGGCCTTATGGATGATGCCTTTCAGTTTGTCATTCAAAATCATGGTATTAATACTGAAGCTAATTATCCCTACACGGCTGGCGATGGTACATGCAATGCTAAGGAGGAAGCAGGTCATGCAGCCACGATAACTGGCTACGAAGATGTGCCTGCAAACAGCGAAAGTGCCCTTCTTAAGGCTGTGGCTAATCAGCCTATTTCTGTTGCCATTGATGCTAGTGGATCTGACTTCCAGTTCTATTCAAGTGGCGTTTTCACAGGAACATGTGGAACGGATCTAGACCATGGTGTTACCGCCGTTGGTTATGGCGTGAGTGCTGATGGGACTAGGTACTGGTTGGTGAAGAACTCATGGGGTGCACAATGGGGTGAAGAAGGTTATATAAGGATGCAGAGAGATGTTGCTGCAGCGGGAGGTCTTTGTGGCATTGCCATGGAAGCCTCTTACCCCACTGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000323 GO:0000325 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009505 GO:0009555 GO:0009605 GO:0009607 GO:0009620 GO:0009626 GO:0009791 GO:0009908 GO:0009987 GO:0010623 GO:0012501 GO:0012505 GO:0016787 GO:0019538 GO:0022414 GO:0030154 GO:0030163 GO:0030312 GO:0032501 GO:0032502 GO:0033554 GO:0034050 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048468 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050832 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0070011 GO:0071704 GO:0071944 GO:0090567 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I29 Peptidase_C1

Protein Analysis

332

Amino Acids

36.14

Weight (kDa)

4.7

Isoelectric Point (pI)

20.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I29	PF08246	39 - 96	8.6e-18	Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1	PF00112	122 - 331	7e-73	Papain family cysteine protease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22160
fragaria_vesca	FvH4_1g23580 FvH4_1g25982 FvH4_2g17070 FvH4_3g40500 FvH4_6g27180 FvH4_6g27320 FvH4_6g33300 FvH4_6g33310 FvH4_7g09480 FvH4_7g13000 FvH4_7g13320 FvH4_7g13600
malus_domestica	MD00G1208000.v1.1 MD09G1238200.v1.1 MD09G1238600.v1.1 MD09G1238800.v1.1 MD09G1239100.v1.1 MD16G1226900.v1.1 MD16G1242700.v1.1 MD16G1244200.v1.1 MD16G1245500.v1.1 MD16G1245800.v1.1 MD17G1231600.v1.1 MD17G1231700.v1.1 MD17G1231800.v1.1 MD17G1232200.v1.1 MD17G1232300.v1.1 MD17G1232400.v1.1
prunus_persica	Prupe.1G072300_v2.0.a1 Prupe.1G072400_v2.0.a1 Prupe.3G106300_v2.0.a1 Prupe.3G106400_v2.0.a1 Prupe.3G119400_v2.0.a1 Prupe.3G120600_v2.0.a1 Prupe.3G121900_v2.0.a1 Prupe.3G122000_v2.0.a1 Prupe.3G122100_v2.0.a1 Prupe.3G122200_v2.0.a1 Prupe.3G122700_v2.0.a1 Prupe.5G055900_v2.0.a1 Prupe.5G056500_v2.0.a1
pyrus_communis	pycom09g15770 pycom09g15780 pycom09g15790 pycom16g20640 pycom17g18390
rosa_chinensis	RchiOBHm_Chr1g0352141 RchiOBHm_Chr1g0352581 RchiOBHm_Chr1g0352601 RchiOBHm_Chr1g0352621 RchiOBHm_Chr1g0352631 RchiOBHm_Chr2g0119131 RchiOBHm_Chr2g0128691 RchiOBHm_Chr2g0128701 RchiOBHm_Chr2g0129151 RchiOBHm_Chr2g0129221 RchiOBHm_Chr2g0129401 RchiOBHm_Chr2g0129421 RchiOBHm_Chr2g0129431 RchiOBHm_Chr2g0129471 RchiOBHm_Chr2g0129481 RchiOBHm_Chr2g0129491 RchiOBHm_Chr2g0143051 RchiOBHm_Chr2g0143121 RchiOBHm_Chr2g0143171 RchiOBHm_Chr3g0457341 RchiOBHm_Chr5g0049011 RchiOBHm_Chr6g0281281 RchiOBHm_Chr6g0281311
rosa_laevigata	RLG00000012975 RLG00000012976 RLG00000012979 RLG00000018447 RLG00000019018 RLG00000019061 RLG00000019066 RLG00000019078 RLG00000019079 RLG00000019080 RLG00000019083 RLG00000019085 RLG00000020009 RLG00000020010 RLG00000025234 RLG00000028326 RLG00000028327 RLG00000028328 RLG00000028329 RLG00000028357 RLG00000031784
rosa_multiflora	Rmu_co8169188.1_g000001 Rmu_co8261007.1_g000001 Rmu_co8314361.1_g000001 Rmu_sc0000109.1_g000014 Rmu_sc0000638.1_g000020 Rmu_sc0000847.1_g000020 Rmu_sc0000847.1_g000028 Rmu_sc0000847.1_g000037 Rmu_sc0000847.1_g000046 Rmu_sc0000911.1_g000034 Rmu_sc0000999.1_g000021 Rmu_sc0001171.1_g000013 Rmu_sc0001171.1_g000018 Rmu_sc0001171.1_g000019 Rmu_sc0001653.1_g000004 Rmu_sc0002277.1_g000005 Rmu_sc0003479.1_g000001 Rmu_sc0005118.1_g000006 Rmu_sc0005118.1_g000008 Rmu_sc0005227.1_g000012 Rmu_sc0005442.1_g000010 Rmu_sc0005514.1_g000005 Rmu_sc0005996.1_g000014 Rmu_sc0008800.1_g000002 Rmu_sc0008800.1_g000010 Rmu_sc0008800.1_g000014
rosa_roxburghii	Rroxscaffold_1G00065560 Rroxscaffold_2G00102080 Rroxscaffold_2G00102090 Rroxscaffold_2G00102110 Rroxscaffold_2G00114560 Rroxscaffold_2G00114570 Rroxscaffold_2G00114610 Rroxscaffold_2G00114620 Rroxscaffold_2G00114640 Rroxscaffold_2G00114740 Rroxscaffold_2G00114790 Rroxscaffold_2G00115860 Rroxscaffold_2G00124490 Rroxscaffold_4G00302260 Rroxscaffold_4G00302530 Rroxscaffold_4G00302550 Rroxscaffold_4G00302560 Rroxscaffold_4G00302620 Rroxscaffold_6G00421980 Rroxscaffold_7G00187140 Rroxscaffold_7G00187170
rosa_rugosa	Rorug01G0225000 Rorug01G0230200 Rorug02G0220500 Rorug02G0280000 Rorug02G0285200 Rorug02G0285400 Rorug02G0286300 Rorug02G0286300 Rorug02G0286400 Rorug02G0286900 Rorug02G0377800 Rorug02G0377900 Rorug02G0378000 Rorug02G0378000 Rorug02G0378800 Rorug03G0019800 Rorug04G0452700 Rorug06G0140300 Rorug06G0140500 Rorug06G0140600
rosa_samantha	Rh1CG223600 Rh1CG227200 Rh1CG227500 Rh1CG227600 Rh2BG341200 Rh2BG345300 Rh2BG440200 Rh2DG284500 Rh2DG357900 Rh2DG362100 Rh2DG362600 Rh2DG364500 Rh2DG364600 Rh2DG364700 Rh2DG364800 Rh2DG364900 Rh2DG365000 Rh2DG365400 Rh2DG450400 Rh3AG080000 Rh3BG081900 Rh5AG322100 Rh5BG079800 Rh6AG252100 Rh6BG255600
rosa_wichuraiana	Rw1G020770 Rw1G021290 Rw2G022120 Rw2G026940 Rw2G027360 Rw2G027370 Rw2G027950 Rw2G027960 Rw2G027970 Rw2G035220 Rw3G006890 Rw6G021900 Rw6G021930 Rw6G021950 Rw6G021970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	509
Acc36I	ACCTGC	1 cut(s)	641
AccB7I	CCANNNNNTGG	1 cut(s)	430
AciI	CCGC	2 cut(s)	834, 950
AclWI	GGATC	3 cut(s)	180, 769, 822
AcuI	CTGAAG	1 cut(s)	615
AfaI	GTAC	3 cut(s)	350, 628, 872
AfiI	CCNNNNNNNGG	3 cut(s)	52, 430, 715
AflII	CTTAAG	1 cut(s)	713
AflIII	ACRYGT	2 cut(s)	142, 803
AgsI	TTSAA	8 cut(s)	91, 181, 190, 256, 310, 346, 575, 783
AjiI	CACGTC	1 cut(s)	143
AluBI	AGCT	2 cut(s)	496, 599
AluI	AGCT	2 cut(s)	496, 599
Alw21I	GWGCWC	1 cut(s)	901
Alw44I	GTGCAC	1 cut(s)	897
AlwI	GGATC	3 cut(s)	180, 769, 822
AoxI	GGCC	3 cut(s)	36, 421, 541
ApaLI	GTGCAC	1 cut(s)	897
ApeKI	GCWGC	3 cut(s)	659, 944, 947
AseI	ATTAAT	1 cut(s)	588
AspS9I	GGNCC	2 cut(s)	43, 415
AsuHPI	GGTGA	3 cut(s)	530, 892, 920
AvaII	GGWCC	2 cut(s)	43, 415
BaeGI	GKGCMC	3 cut(s)	318, 709, 901
BbsI	GAAGAC	3 cut(s)	57, 338, 528
Bbv12I	GWGCWC	1 cut(s)	901
BbvI	GCAGC	3 cut(s)	671, 931, 959
BccI	CCATC	4 cut(s)	121, 221, 617, 854
BceAI	ACGGC	2 cut(s)	630, 821
BcgI	CGANNNNNNTGC	2 cut(s)	83, 117
BfaI	CTAG	3 cut(s)	756, 818, 867
BfmI	CTRYAG	1 cut(s)	945
BfrI	CTTAAG	1 cut(s)	713
BfuAI	ACCTGC	1 cut(s)	641
BglII	AGATCT	1 cut(s)	268
BisI	GCNGC	3 cut(s)	660, 945, 948
BlsI	GCNGC	3 cut(s)	661, 946, 949
Bme18I	GGWCC	2 cut(s)	43, 415
BmgBI	CACGTC	1 cut(s)	143
BmgT120I	GGNCC	2 cut(s)	43, 415
BmsI	GCATC	4 cut(s)	85, 544, 742, 918
BpiI	GAAGAC	3 cut(s)	57, 338, 528
BpmI	CTGGAG	1 cut(s)	403
Bpu10I	CCTNAGC	1 cut(s)	639
BpuEI	CTTGAG	1 cut(s)	280
Bsa29I	ATCGAT	1 cut(s)	304
BsaJI	CCNNGG	6 cut(s)	39, 418, 514, 526, 823, 972
Bsc4I	CCNNNNNNNGG	3 cut(s)	52, 430, 715
Bse118I	RCCGGY	1 cut(s)	367
Bse1I	ACTGG	5 cut(s)	386, 469, 676, 772, 878
Bse3DI	GCAATG	4 cut(s)	128, 288, 640, 966
BseCI	ATCGAT	1 cut(s)	304
BseDI	CCNNGG	6 cut(s)	39, 418, 514, 526, 823, 972
BseGI	GGATG	3 cut(s)	132, 556, 933
BseLI	CCNNNNNNNGG	3 cut(s)	52, 430, 715
BseMI	GCAATG	4 cut(s)	128, 288, 640, 966
BseMII	CTCAG	1 cut(s)	477
BseNI	ACTGG	5 cut(s)	386, 469, 676, 772, 878
BseSI	GKGCMC	3 cut(s)	318, 709, 901
BseXI	GCAGC	3 cut(s)	671, 931, 959
BshFI	GGCC	3 cut(s)	38, 423, 543
BshVI	ATCGAT	1 cut(s)	304
BsiHKAI	GWGCWC	1 cut(s)	901
BsiSI	CCGG	1 cut(s)	368
BslFI	GGGAC	1 cut(s)	877
BslI	CCNNNNNNNGG	3 cut(s)	52, 430, 715
BsmFI	GGGAC	1 cut(s)	877
BsnI	GGCC	3 cut(s)	38, 423, 543
Bsp1286I	GDGCHC	3 cut(s)	318, 709, 901
Bsp143I	GATC	4 cut(s)	172, 268, 761, 814
Bsp19I	CCATGG	2 cut(s)	823, 972
BspACI	CCGC	2 cut(s)	834, 950
BspANI	GGCC	3 cut(s)	38, 423, 543
BspCNI	CTCAG	1 cut(s)	478
BspDI	ATCGAT	1 cut(s)	304
BspMAI	CTGCAG	1 cut(s)	949
BspMI	ACCTGC	1 cut(s)	641
BspPI	GGATC	3 cut(s)	180, 769, 822
BspTI	CTTAAG	1 cut(s)	713
BsrDI	GCAATG	4 cut(s)	128, 288, 640, 966
BsrFI	RCCGGY	1 cut(s)	367
BsrI	ACTGG	5 cut(s)	386, 469, 676, 772, 878
BssAI	RCCGGY	1 cut(s)	367
BssECI	CCNNGG	6 cut(s)	39, 418, 514, 526, 823, 972
BssMI	GATC	4 cut(s)	172, 268, 761, 814
BssT1I	CCWWGG	6 cut(s)	39, 418, 514, 526, 823, 972
Bst4CI	ACNGT	2 cut(s)	364, 506
Bst6I	CTCTTC	1 cut(s)	276
BstAFI	CTTAAG	1 cut(s)	713
BstAPI	GCANNNNNTGC	1 cut(s)	656
BstC8I	GCNNGC	3 cut(s)	369, 619, 690
BstDEI	CTNAG	2 cut(s)	486, 639
BstDSI	CCRYGG	2 cut(s)	823, 972
BstENI	CCTNNNNNAGG	1 cut(s)	713
BstF5I	GGATG	3 cut(s)	132, 556, 933
BstKTI	GATC	4 cut(s)	175, 271, 764, 817
BstMBI	GATC	4 cut(s)	172, 268, 761, 814
BstMWI	GCNNNNNNNGC	3 cut(s)	656, 752, 977
BstNSI	RCATGY	2 cut(s)	633, 807
BstSFI	CTRYAG	1 cut(s)	945
BstSLI	GKGCMC	3 cut(s)	318, 709, 901
BstV1I	GCAGC	3 cut(s)	671, 931, 959
BstV2I	GAAGAC	3 cut(s)	57, 338, 528
BstX2I	RGATCY	3 cut(s)	268, 761, 814
BstYI	RGATCY	3 cut(s)	268, 761, 814
Bsu15I	ATCGAT	1 cut(s)	304
BsuRI	GGCC	3 cut(s)	38, 423, 543
BsuTUI	ATCGAT	1 cut(s)	304
BtgI	CCRYGG	2 cut(s)	823, 972
BtgZI	GCGATG	1 cut(s)	636
BtrI	CACGTC	1 cut(s)	143
BtsCI	GGATG	3 cut(s)	132, 556, 933
BtsI	GCAGTG	1 cut(s)	990
BtsIMutI	CAGTG	1 cut(s)	990
BveI	ACCTGC	1 cut(s)	641
Cac8I	GCNNGC	3 cut(s)	369, 619, 690
Cfr10I	RCCGGY	1 cut(s)	367
Cfr13I	GGNCC	2 cut(s)	43, 415
ClaI	ATCGAT	1 cut(s)	304
Csp6I	GTAC	3 cut(s)	349, 627, 871
CviAII	CATG	8 cut(s)	49, 581, 630, 656, 804, 824, 891, 973
CviQI	GTAC	3 cut(s)	349, 627, 871
DdeI	CTNAG	2 cut(s)	486, 639
DpnI	GATC	4 cut(s)	174, 270, 763, 816
DpnII	GATC	4 cut(s)	172, 268, 761, 814
DrdI	GACNNNNNNGTC	1 cut(s)	509
DseDI	GACNNNNNNGTC	1 cut(s)	509
Eam1104I	CTCTTC	1 cut(s)	276
EarI	CTCTTC	1 cut(s)	276
Eco130I	CCWWGG	6 cut(s)	39, 418, 514, 526, 823, 972
Eco47I	GGWCC	2 cut(s)	43, 415
Eco57I	CTGAAG	1 cut(s)	615
EcoNI	CCTNNNNNAGG	1 cut(s)	713
EcoT14I	CCWWGG	6 cut(s)	39, 418, 514, 526, 823, 972
EcoT22I	ATGCAT	1 cut(s)	100
ErhI	CCWWGG	6 cut(s)	39, 418, 514, 526, 823, 972
FaeI	CATG	8 cut(s)	52, 584, 633, 659, 807, 827, 894, 976
FaqI	GGGAC	1 cut(s)	877
FatI	CATG	8 cut(s)	48, 580, 629, 655, 803, 823, 890, 972
FauI	CCCGC	1 cut(s)	943
Fnu4HI	GCNGC	3 cut(s)	660, 945, 948
FokI	GGATG	3 cut(s)	139, 563, 940
Fsp4HI	GCNGC	3 cut(s)	660, 945, 948
FspBI	CTAG	3 cut(s)	756, 818, 867
GluI	GCNGC	3 cut(s)	660, 945, 948
GsuI	CTGGAG	1 cut(s)	403
HaeIII	GGCC	3 cut(s)	38, 423, 543
HapII	CCGG	1 cut(s)	368
Hin1II	CATG	8 cut(s)	52, 584, 633, 659, 807, 827, 894, 976
HincII	GTYRAC	1 cut(s)	502
HindII	GTYRAC	1 cut(s)	502
HinfI	GANTC	3 cut(s)	212, 306, 447
HpaII	CCGG	1 cut(s)	368
HphI	GGTGA	3 cut(s)	530, 892, 920
Hpy166II	GTNNAC	4 cut(s)	9, 470, 502, 899
Hpy188I	TCNGA	3 cut(s)	70, 487, 766
Hpy188III	TCNNGA	2 cut(s)	297, 818
Hpy8I	GTNNAC	4 cut(s)	9, 470, 502, 899
HpyAV	CCTTC	5 cut(s)	160, 385, 437, 719, 908
HpyCH4III	ACNGT	2 cut(s)	364, 506
HpyCH4IV	ACGT	1 cut(s)	142
HpyCH4V	TGCA	9 cut(s)	98, 266, 633, 659, 692, 899, 931, 947, 995
HpyF10VI	GCNNNNNNNGC	3 cut(s)	656, 752, 977
HpyF3I	CTNAG	2 cut(s)	486, 639
HpySE526I	ACGT	1 cut(s)	142
Hsp92II	CATG	8 cut(s)	52, 584, 633, 659, 807, 827, 894, 976
KroI	GCCGGC	1 cut(s)	367
KroNI	GCCGGC	1 cut(s)	369
Kzo9I	GATC	4 cut(s)	172, 268, 761, 814
Lsp1109I	GCAGC	3 cut(s)	671, 931, 959
LweI	GCATC	4 cut(s)	85, 544, 742, 918
MaeI	CTAG	3 cut(s)	756, 818, 867
MaeII	ACGT	1 cut(s)	142
MaeIII	GTNAC	3 cut(s)	134, 400, 829
MalI	GATC	4 cut(s)	174, 270, 763, 816
MboI	GATC	4 cut(s)	172, 268, 761, 814
MboII	GAAGA	8 cut(s)	57, 207, 293, 343, 533, 692, 895, 923
MflI	RGATCY	3 cut(s)	268, 761, 814
MhlI	GDGCHC	3 cut(s)	318, 709, 901
MluCI	AATT	3 cut(s)	260, 456, 601
MnlI	CCTC	8 cut(s)	56, 105, 163, 193, 304, 637, 947, 991
Mph1103I	ATGCAT	1 cut(s)	100
MroNI	GCCGGC	1 cut(s)	367
MseI	TTAA	2 cut(s)	588, 714
MslI	CAYNNNNRTG	1 cut(s)	971
MspA1I	CMGCKG	1 cut(s)	950
MspCI	CTTAAG	1 cut(s)	713
MspI	CCGG	1 cut(s)	368
MwoI	GCNNNNNNNGC	3 cut(s)	656, 752, 977
NaeI	GCCGGC	1 cut(s)	369
NcoI	CCATGG	2 cut(s)	823, 972
NdeII	GATC	4 cut(s)	172, 268, 761, 814
NgoMIV	GCCGGC	1 cut(s)	367
NlaIII	CATG	8 cut(s)	52, 584, 633, 659, 807, 827, 894, 976
NsiI	ATGCAT	1 cut(s)	100
NspI	RCATGY	2 cut(s)	633, 807
PciI	ACATGT	1 cut(s)	803
PcsI	WCGNNNNNNNCGW	1 cut(s)	139
PdiI	GCCGGC	1 cut(s)	369
PfeI	GAWTC	3 cut(s)	212, 306, 447
PflMI	CCANNNNNTGG	1 cut(s)	430
PkrI	GCNGC	3 cut(s)	661, 946, 949
PscI	ACATGT	1 cut(s)	803
PshBI	ATTAAT	1 cut(s)	588
PspPI	GGNCC	2 cut(s)	43, 415
PstI	CTGCAG	1 cut(s)	949
PsuI	RGATCY	3 cut(s)	268, 761, 814
RsaI	GTAC	3 cut(s)	350, 628, 872
RsaNI	GTAC	3 cut(s)	349, 627, 871
RseI	CAYNNNNRTG	1 cut(s)	971
SaqAI	TTAA	2 cut(s)	588, 714
SatI	GCNGC	3 cut(s)	660, 945, 948
Sau3AI	GATC	4 cut(s)	172, 268, 761, 814
Sau96I	GGNCC	2 cut(s)	43, 415
SduI	GDGCHC	3 cut(s)	318, 709, 901
SfaNI	GCATC	4 cut(s)	85, 544, 742, 918
SfcI	CTRYAG	1 cut(s)	945
SinI	GGWCC	2 cut(s)	43, 415
SmiMI	CAYNNNNRTG	1 cut(s)	971
SmlI	CTYRAG	2 cut(s)	295, 713
SmoI	CTYRAG	2 cut(s)	295, 713
Sse9I	AATT	3 cut(s)	260, 456, 601
SsiI	CCGC	2 cut(s)	834, 950
SspMI	CTAG	3 cut(s)	756, 818, 867
StyI	CCWWGG	6 cut(s)	39, 418, 514, 526, 823, 972
TaaI	ACNGT	2 cut(s)	364, 506
TaiI	ACGT	1 cut(s)	145
TaqI	TCGA	1 cut(s)	304
TasI	AATT	3 cut(s)	260, 456, 601
TfiI	GAWTC	3 cut(s)	212, 306, 447
Tru1I	TTAA	2 cut(s)	588, 714
Tru9I	TTAA	2 cut(s)	588, 714
TscAI	CASTG	1 cut(s)	997
TseI	GCWGC	3 cut(s)	659, 944, 947
TspDTI	ATGAA	2 cut(s)	277, 294
TspGWI	ACGGA	2 cut(s)	153, 827
TspRI	CASTG	1 cut(s)	997
Van91I	CCANNNNNTGG	1 cut(s)	430
Vha464I	CTTAAG	1 cut(s)	713
VneI	GTGCAC	1 cut(s)	897
VpaK11BI	GGWCC	2 cut(s)	43, 415
VspI	ATTAAT	1 cut(s)	588
XagI	CCTNNNNNAGG	1 cut(s)	713
XbaI	TCTAGA	1 cut(s)	817
XceI	RCATGY	2 cut(s)	633, 807
XspI	CTAG	3 cut(s)	756, 818, 867
Zsp2I	ATGCAT	1 cut(s)	100

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.