Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0000141

Physical Location & Seq

Genomic Coordinates Forward (+)

21441986 .. 21442991

Gene Structure 1006 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000028328

Sequence Viewer

CDS Protein Promoter (2k)

Length: 750 bp

ATGGAGTTCACCAACCAGAGCAAATGCATCTGTTTGGCATTGGTCCTCATGTTGGCGGCCGCGGCTTGGTCTTTGGAAGCCACTTCTCGTAGTCTCCAAGATGCATTAGCTTGGGAGGAGGAGCGCTTCAAGATATTCCAGGAGAATGAGGCATTCATAGAATATTCCAACAACGATGGAAACAAACTTTACAAATTGAGTCTGAATCAATTTGCAGACCTTACAAATGAAGATCGACTGATCGAGTTCACTGCCTCAAGAAATCGATTCAAGGCACGTGAATGTTCCACGAAGACTACTACTTTCAAGAATGAAAATGCTACTGTGCCAACTACAATGGACTGGAGAAAGAAGGGAGTTGAAGTTGTTGAGCATTCTCGGCGGTGGGCGTTATGGAACGAATCACTCAACTTACAACTGAGCCTGTTGACTGTACGTGATGTCAAAGGTGTAGACCAAGGCTGTGCAGGAGGCCTTATGGACAATGCCTTTCAGTTTGTCATTCAAAATCATGGTATAAATACCGAGGCTAATTATCCCTACACGGCTGCGGATGGTACATGCAATGCCAAGAAGGAAGCAGGCCATGCAGCCTTAATAACTGGCCACGAAGATGTCCCTGCAAACAGCGAAAGCGCCCTTCTTAAGGCTGTGGCTAATCAACATTTCTCTGTTGCTATTGATGCTAGTGGATCTGACTTCCAGTTCTATTCAAGTGGTTTTACACAGGAACATGTGGAACGGGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000323 GO:0000325 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009505 GO:0009555 GO:0009605 GO:0009607 GO:0009620 GO:0009626 GO:0009791 GO:0009908 GO:0009987 GO:0010623 GO:0012501 GO:0012505 GO:0016787 GO:0019538 GO:0022414 GO:0030154 GO:0030163 GO:0030312 GO:0032501 GO:0032502 GO:0033554 GO:0034050 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048468 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050832 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0070011 GO:0071704 GO:0071944 GO:0090567 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I29 Peptidase_C1

Protein Analysis

250

Amino Acids

27.85

Weight (kDa)

5.21

Isoelectric Point (pI)

34.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I29	PF08246	39 - 78	9.6e-10	Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1	PF00112	133 - 244	6.8e-24	Papain family cysteine protease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22160
fragaria_vesca	FvH4_1g23580 FvH4_1g25982 FvH4_2g17070 FvH4_3g40500 FvH4_6g27180 FvH4_6g27320 FvH4_6g33300 FvH4_6g33310 FvH4_7g09480 FvH4_7g13000 FvH4_7g13320 FvH4_7g13600
malus_domestica	MD00G1208000.v1.1 MD09G1238200.v1.1 MD09G1238600.v1.1 MD09G1238800.v1.1 MD09G1239100.v1.1 MD16G1226900.v1.1 MD16G1242700.v1.1 MD16G1244200.v1.1 MD16G1245500.v1.1 MD16G1245800.v1.1 MD17G1231600.v1.1 MD17G1231700.v1.1 MD17G1231800.v1.1 MD17G1232200.v1.1 MD17G1232300.v1.1 MD17G1232400.v1.1
prunus_persica	Prupe.1G072300_v2.0.a1 Prupe.1G072400_v2.0.a1 Prupe.3G106300_v2.0.a1 Prupe.3G106400_v2.0.a1 Prupe.3G119400_v2.0.a1 Prupe.3G120600_v2.0.a1 Prupe.3G121900_v2.0.a1 Prupe.3G122000_v2.0.a1 Prupe.3G122100_v2.0.a1 Prupe.3G122200_v2.0.a1 Prupe.3G122700_v2.0.a1 Prupe.5G055900_v2.0.a1 Prupe.5G056500_v2.0.a1
pyrus_communis	pycom09g15770 pycom09g15780 pycom09g15790 pycom16g20640 pycom17g18390
rosa_chinensis	RchiOBHm_Chr1g0352141 RchiOBHm_Chr1g0352581 RchiOBHm_Chr1g0352601 RchiOBHm_Chr1g0352621 RchiOBHm_Chr1g0352631 RchiOBHm_Chr2g0119131 RchiOBHm_Chr2g0128691 RchiOBHm_Chr2g0128701 RchiOBHm_Chr2g0129151 RchiOBHm_Chr2g0129221 RchiOBHm_Chr2g0129401 RchiOBHm_Chr2g0129421 RchiOBHm_Chr2g0129431 RchiOBHm_Chr2g0129471 RchiOBHm_Chr2g0129481 RchiOBHm_Chr2g0129491 RchiOBHm_Chr2g0143051 RchiOBHm_Chr2g0143121 RchiOBHm_Chr2g0143171 RchiOBHm_Chr3g0457341 RchiOBHm_Chr5g0049011 RchiOBHm_Chr6g0281281 RchiOBHm_Chr6g0281311
rosa_laevigata	RLG00000012975 RLG00000012976 RLG00000012979 RLG00000018447 RLG00000019018 RLG00000019061 RLG00000019066 RLG00000019078 RLG00000019079 RLG00000019080 RLG00000019083 RLG00000019085 RLG00000020009 RLG00000020010 RLG00000025234 RLG00000028326 RLG00000028327 RLG00000028328 RLG00000028329 RLG00000028357 RLG00000031784
rosa_multiflora	Rmu_co8169188.1_g000001 Rmu_co8261007.1_g000001 Rmu_co8314361.1_g000001 Rmu_sc0000109.1_g000014 Rmu_sc0000638.1_g000020 Rmu_sc0000847.1_g000020 Rmu_sc0000847.1_g000028 Rmu_sc0000847.1_g000037 Rmu_sc0000847.1_g000046 Rmu_sc0000911.1_g000034 Rmu_sc0000999.1_g000021 Rmu_sc0001171.1_g000013 Rmu_sc0001171.1_g000018 Rmu_sc0001171.1_g000019 Rmu_sc0001653.1_g000004 Rmu_sc0002277.1_g000005 Rmu_sc0003479.1_g000001 Rmu_sc0005118.1_g000006 Rmu_sc0005118.1_g000008 Rmu_sc0005227.1_g000012 Rmu_sc0005442.1_g000010 Rmu_sc0005514.1_g000005 Rmu_sc0005996.1_g000014 Rmu_sc0008800.1_g000002 Rmu_sc0008800.1_g000010 Rmu_sc0008800.1_g000014
rosa_roxburghii	Rroxscaffold_1G00065560 Rroxscaffold_2G00102080 Rroxscaffold_2G00102090 Rroxscaffold_2G00102110 Rroxscaffold_2G00114560 Rroxscaffold_2G00114570 Rroxscaffold_2G00114610 Rroxscaffold_2G00114620 Rroxscaffold_2G00114640 Rroxscaffold_2G00114740 Rroxscaffold_2G00114790 Rroxscaffold_2G00115860 Rroxscaffold_2G00124490 Rroxscaffold_4G00302260 Rroxscaffold_4G00302530 Rroxscaffold_4G00302550 Rroxscaffold_4G00302560 Rroxscaffold_4G00302620 Rroxscaffold_6G00421980 Rroxscaffold_7G00187140 Rroxscaffold_7G00187170
rosa_rugosa	Rorug01G0225000 Rorug01G0230200 Rorug02G0220500 Rorug02G0280000 Rorug02G0285200 Rorug02G0285400 Rorug02G0286300 Rorug02G0286300 Rorug02G0286400 Rorug02G0286900 Rorug02G0377800 Rorug02G0377900 Rorug02G0378000 Rorug02G0378000 Rorug02G0378800 Rorug03G0019800 Rorug04G0452700 Rorug06G0140300 Rorug06G0140500 Rorug06G0140600
rosa_samantha	Rh1CG223600 Rh1CG227200 Rh1CG227500 Rh1CG227600 Rh2BG341200 Rh2BG345300 Rh2BG440200 Rh2DG284500 Rh2DG357900 Rh2DG362100 Rh2DG362600 Rh2DG364500 Rh2DG364600 Rh2DG364700 Rh2DG364800 Rh2DG364900 Rh2DG365000 Rh2DG365400 Rh2DG450400 Rh3AG080000 Rh3BG081900 Rh5AG322100 Rh5BG079800 Rh6AG252100 Rh6BG255600
rosa_wichuraiana	Rw1G020770 Rw1G021290 Rw2G022120 Rw2G026940 Rw2G027360 Rw2G027370 Rw2G027950 Rw2G027960 Rw2G027970 Rw2G035220 Rw3G006890 Rw6G021900 Rw6G021930 Rw6G021950 Rw6G021970

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	453
AccII	CGCG	1 cut(s)	62
AciI	CCGC	5 cut(s)	56, 60, 62, 382, 551
AclWI	GGATC	1 cut(s)	700
AcoI	YGGCCR	2 cut(s)	57, 604
AcvI	CACGTG	1 cut(s)	278
AfaI	GTAC	2 cut(s)	435, 559
AfeI	AGCGCT	1 cut(s)	125
AfiI	CCNNNNNNNGG	3 cut(s)	52, 66, 646
AflII	CTTAAG	1 cut(s)	644
AflIII	ACRYGT	1 cut(s)	733
AgsI	TTSAA	6 cut(s)	130, 271, 307, 362, 506, 714
AjnI	CCWGG	1 cut(s)	138
AluBI	AGCT	1 cut(s)	110
AluI	AGCT	1 cut(s)	110
Alw26I	GTCTC	1 cut(s)	98
AlwI	GGATC	1 cut(s)	700
Aor51HI	AGCGCT	1 cut(s)	125
AoxI	GGCC	4 cut(s)	57, 472, 583, 604
ApeKI	GCWGC	2 cut(s)	548, 590
AspLEI	GCGC	2 cut(s)	126, 638
AspS9I	GGNCC	1 cut(s)	43
AvaII	GGWCC	1 cut(s)	43
BalI	TGGCCA	1 cut(s)	606
BbrPI	CACGTG	1 cut(s)	278
BbsI	GAAGAC	1 cut(s)	299
BbvI	GCAGC	2 cut(s)	535, 602
BccI	CCATC	2 cut(s)	170, 548
BceAI	ACGGC	1 cut(s)	561
BcgI	CGANNNNNNTGC	2 cut(s)	233, 267
BciT130I	CCWGG	1 cut(s)	140
BcoDI	GTCTC	1 cut(s)	98
BfaI	CTAG	2 cut(s)	687, 748
BfoI	RGCGCY	2 cut(s)	127, 639
BfrI	CTTAAG	1 cut(s)	644
BisI	GCNGC	5 cut(s)	57, 60, 63, 549, 591
BlsI	GCNGC	5 cut(s)	58, 61, 64, 550, 592
Bme1390I	CCNGG	1 cut(s)	140
Bme18I	GGWCC	1 cut(s)	43
BmgT120I	GGNCC	1 cut(s)	43
BmrFI	CCNGG	1 cut(s)	140
BmsI	GCATC	3 cut(s)	36, 91, 673
BpiI	GAAGAC	1 cut(s)	299
BpmI	CTGGAG	1 cut(s)	364
BpuEI	CTTGAG	1 cut(s)	241
Bsa29I	ATCGAT	1 cut(s)	265
BsaAI	YACGTR	2 cut(s)	278, 437
BsaJI	CCNNGG	3 cut(s)	60, 457, 525
BsaXI	ACNNNNNCTCC	2 cut(s)	348, 378
Bsc4I	CCNNNNNNNGG	3 cut(s)	52, 66, 646
Bse1I	ACTGG	3 cut(s)	347, 607, 703
Bse3DI	GCAATG	1 cut(s)	571
BseBI	CCWGG	1 cut(s)	140
BseCI	ATCGAT	1 cut(s)	265
BseDI	CCNNGG	3 cut(s)	60, 457, 525
BseGI	GGATG	1 cut(s)	559
BseLI	CCNNNNNNNGG	3 cut(s)	52, 66, 646
BseMI	GCAATG	1 cut(s)	571
BseMII	CTCAG	1 cut(s)	410
BseNI	ACTGG	3 cut(s)	347, 607, 703
BseRI	GAGGAG	2 cut(s)	131, 134
BseX3I	CGGCCG	1 cut(s)	57
BseXI	GCAGC	2 cut(s)	535, 602
BsgI	GTGCAG	1 cut(s)	486
Bsh1236I	CGCG	1 cut(s)	62
Bsh1285I	CGRYCG	1 cut(s)	60
BshFI	GGCC	4 cut(s)	59, 474, 585, 606
BshVI	ATCGAT	1 cut(s)	265
BsiEI	CGRYCG	1 cut(s)	60
BslFI	GGGAC	1 cut(s)	602
BslI	CCNNNNNNNGG	3 cut(s)	52, 66, 646
BsmAI	GTCTC	1 cut(s)	98
BsmFI	GGGAC	1 cut(s)	602
BsmI	GAATGC	2 cut(s)	152, 373
BsnI	GGCC	4 cut(s)	59, 474, 585, 606
Bsp143I	GATC	3 cut(s)	232, 240, 692
BspACI	CCGC	5 cut(s)	56, 60, 62, 382, 551
BspANI	GGCC	4 cut(s)	59, 474, 585, 606
BspCNI	CTCAG	1 cut(s)	411
BspDI	ATCGAT	1 cut(s)	265
BspFNI	CGCG	1 cut(s)	62
BspPI	GGATC	1 cut(s)	700
BspTI	CTTAAG	1 cut(s)	644
BsrDI	GCAATG	1 cut(s)	571
BsrI	ACTGG	3 cut(s)	347, 607, 703
BssECI	CCNNGG	3 cut(s)	60, 457, 525
BssMI	GATC	3 cut(s)	232, 240, 692
BssT1I	CCWWGG	1 cut(s)	457
Bst2UI	CCWGG	1 cut(s)	140
Bst4CI	ACNGT	2 cut(s)	325, 433
BstAFI	CTTAAG	1 cut(s)	644
BstAPI	GCANNNNNTGC	1 cut(s)	587
BstBAI	YACGTR	2 cut(s)	278, 437
BstC8I	GCNNGC	1 cut(s)	583
BstDEI	CTNAG	1 cut(s)	419
BstDSI	CCRYGG	1 cut(s)	60
BstENI	CCTNNNNNAGG	1 cut(s)	644
BstF5I	GGATG	1 cut(s)	559
BstFNI	CGCG	1 cut(s)	62
BstH2I	RGCGCY	2 cut(s)	127, 639
BstHHI	GCGC	2 cut(s)	126, 638
BstKTI	GATC	3 cut(s)	235, 243, 695
BstMAI	GTCTC	1 cut(s)	98
BstMBI	GATC	3 cut(s)	232, 240, 692
BstMCI	CGRYCG	1 cut(s)	60
BstMWI	GCNNNNNNNGC	4 cut(s)	62, 379, 587, 683
BstNI	CCWGG	1 cut(s)	140
BstNSI	RCATGY	2 cut(s)	564, 737
BstSCI	CCNGG	1 cut(s)	138
BstUI	CGCG	1 cut(s)	62
BstV1I	GCAGC	2 cut(s)	535, 602
BstV2I	GAAGAC	1 cut(s)	299
BstX2I	RGATCY	1 cut(s)	692
BstYI	RGATCY	1 cut(s)	692
BstZI	CGGCCG	1 cut(s)	57
Bsu15I	ATCGAT	1 cut(s)	265
BsuRI	GGCC	4 cut(s)	59, 474, 585, 606
BsuTUI	ATCGAT	1 cut(s)	265
BtgI	CCRYGG	1 cut(s)	60
BtsCI	GGATG	1 cut(s)	559
BtsI	GCAGTG	1 cut(s)	249
BtsIMutI	CAGTG	1 cut(s)	249
Cac8I	GCNNGC	1 cut(s)	583
CciNI	GCGGCCGC	1 cut(s)	57
CfoI	GCGC	2 cut(s)	126, 638
Cfr13I	GGNCC	1 cut(s)	43
Cfr42I	CCGCGG	1 cut(s)	63
ClaI	ATCGAT	1 cut(s)	265
Csp6I	GTAC	2 cut(s)	434, 558
CviAII	CATG	5 cut(s)	49, 512, 561, 587, 734
CviQI	GTAC	2 cut(s)	434, 558
DdeI	CTNAG	1 cut(s)	419
DpnI	GATC	3 cut(s)	234, 242, 694
DpnII	GATC	3 cut(s)	232, 240, 692
EaeI	YGGCCR	2 cut(s)	57, 604
EagI	CGGCCG	1 cut(s)	57
EclXI	CGGCCG	1 cut(s)	57
Eco130I	CCWWGG	1 cut(s)	457
Eco147I	AGGCCT	1 cut(s)	474
Eco47I	GGWCC	1 cut(s)	43
Eco47III	AGCGCT	1 cut(s)	125
Eco52I	CGGCCG	1 cut(s)	57
Eco72I	CACGTG	1 cut(s)	278
EcoNI	CCTNNNNNAGG	1 cut(s)	644
EcoRII	CCWGG	1 cut(s)	138
EcoT14I	CCWWGG	1 cut(s)	457
EcoT22I	ATGCAT	2 cut(s)	29, 106
ErhI	CCWWGG	1 cut(s)	457
FaeI	CATG	5 cut(s)	52, 515, 564, 590, 737
FaiI	YATR	9 cut(s)	50, 158, 394, 479, 513, 518, 562, 588, 735
FaqI	GGGAC	1 cut(s)	602
FatI	CATG	5 cut(s)	48, 511, 560, 586, 733
FblI	GTMKAC	1 cut(s)	453
Fnu4HI	GCNGC	5 cut(s)	57, 60, 63, 549, 591
FokI	GGATG	1 cut(s)	566
Fsp4HI	GCNGC	5 cut(s)	57, 60, 63, 549, 591
FspBI	CTAG	2 cut(s)	687, 748
GlaI	GCGC	2 cut(s)	125, 637
GluI	GCNGC	5 cut(s)	57, 60, 63, 549, 591
GsuI	CTGGAG	1 cut(s)	364
HaeII	RGCGCY	2 cut(s)	127, 639
HaeIII	GGCC	4 cut(s)	59, 474, 585, 606
HhaI	GCGC	2 cut(s)	126, 638
Hin1II	CATG	5 cut(s)	52, 515, 564, 590, 737
Hin6I	GCGC	2 cut(s)	124, 636
HinP1I	GCGC	2 cut(s)	124, 636
HincII	GTYRAC	1 cut(s)	429
HindII	GTYRAC	1 cut(s)	429
HinfI	GANTC	4 cut(s)	199, 205, 267, 401
Hpy166II	GTNNAC	4 cut(s)	9, 249, 429, 454
Hpy188I	TCNGA	2 cut(s)	204, 697
Hpy188III	TCNNGA	3 cut(s)	130, 258, 307
Hpy8I	GTNNAC	4 cut(s)	9, 249, 429, 454
HpyAV	CCTTC	3 cut(s)	346, 568, 650
HpyCH4III	ACNGT	2 cut(s)	325, 433
HpyCH4IV	ACGT	2 cut(s)	277, 436
HpyCH4V	TGCA	7 cut(s)	27, 104, 215, 467, 564, 590, 623
HpyF10VI	GCNNNNNNNGC	4 cut(s)	62, 379, 587, 683
HpyF3I	CTNAG	1 cut(s)	419
HpySE526I	ACGT	2 cut(s)	277, 436
Hsp92II	CATG	5 cut(s)	52, 515, 564, 590, 737
HspAI	GCGC	2 cut(s)	124, 636
KspI	CCGCGG	1 cut(s)	63
Kzo9I	GATC	3 cut(s)	232, 240, 692
LmnI	GCTCC	1 cut(s)	121
Lsp1109I	GCAGC	2 cut(s)	535, 602
LweI	GCATC	3 cut(s)	36, 91, 673
MaeI	CTAG	2 cut(s)	687, 748
MaeII	ACGT	2 cut(s)	277, 436
MalI	GATC	3 cut(s)	234, 242, 694
MboI	GATC	3 cut(s)	232, 240, 692
MboII	GAAGA	3 cut(s)	242, 304, 623
MflI	RGATCY	1 cut(s)	692
MlsI	TGGCCA	1 cut(s)	606
MluCI	AATT	3 cut(s)	194, 209, 532
MluNI	TGGCCA	1 cut(s)	606
MlyI	GAGTC	1 cut(s)	208
MmeI	TCCRAC	1 cut(s)	192
MnlI	CCTC	7 cut(s)	56, 109, 112, 142, 265, 464, 520
Mox20I	TGGCCA	1 cut(s)	606
Mph1103I	ATGCAT	2 cut(s)	29, 106
MscI	TGGCCA	1 cut(s)	606
MseI	TTAA	2 cut(s)	596, 645
MslI	CAYNNNNRTG	2 cut(s)	280, 612
Msp20I	TGGCCA	1 cut(s)	606
MspA1I	CMGCKG	1 cut(s)	62
MspCI	CTTAAG	1 cut(s)	644
MspR9I	CCNGG	1 cut(s)	140
Mva1269I	GAATGC	2 cut(s)	152, 373
MvaI	CCWGG	1 cut(s)	140
MvnI	CGCG	1 cut(s)	62
MwoI	GCNNNNNNNGC	4 cut(s)	62, 379, 587, 683
NdeII	GATC	3 cut(s)	232, 240, 692
NlaIII	CATG	5 cut(s)	52, 515, 564, 590, 737
NmeAIII	GCCGAG	1 cut(s)	358
NotI	GCGGCCGC	1 cut(s)	57
NsiI	ATGCAT	2 cut(s)	29, 106
NspI	RCATGY	2 cut(s)	564, 737
PceI	AGGCCT	1 cut(s)	474
PciI	ACATGT	1 cut(s)	733
PctI	GAATGC	2 cut(s)	152, 373
PfeI	GAWTC	3 cut(s)	205, 267, 401
PfoI	TCCNGGA	1 cut(s)	138
PkrI	GCNGC	5 cut(s)	58, 61, 64, 550, 592
PleI	GAGTC	1 cut(s)	207
PmaCI	CACGTG	1 cut(s)	278
PmlI	CACGTG	1 cut(s)	278
PpsI	GAGTC	1 cut(s)	207
Ppu21I	YACGTR	2 cut(s)	278, 437
PscI	ACATGT	1 cut(s)	733
Psp6I	CCWGG	1 cut(s)	138
PspCI	CACGTG	1 cut(s)	278
PspGI	CCWGG	1 cut(s)	138
PspPI	GGNCC	1 cut(s)	43
PsuI	RGATCY	1 cut(s)	692
RsaI	GTAC	2 cut(s)	435, 559
RsaNI	GTAC	2 cut(s)	434, 558
RseI	CAYNNNNRTG	2 cut(s)	280, 612
SacII	CCGCGG	1 cut(s)	63
SaqAI	TTAA	2 cut(s)	596, 645
SatI	GCNGC	5 cut(s)	57, 60, 63, 549, 591
Sau3AI	GATC	3 cut(s)	232, 240, 692
Sau96I	GGNCC	1 cut(s)	43
SchI	GAGTC	1 cut(s)	208
ScrFI	CCNGG	1 cut(s)	140
SetI	ASST	5 cut(s)	112, 222, 280, 439, 451
SfaNI	GCATC	3 cut(s)	36, 91, 673
Sfr303I	CCGCGG	1 cut(s)	63
SgrBI	CCGCGG	1 cut(s)	63
SinI	GGWCC	1 cut(s)	43
SmiMI	CAYNNNNRTG	2 cut(s)	280, 612
SmlI	CTYRAG	2 cut(s)	256, 644
SmoI	CTYRAG	2 cut(s)	256, 644
Sse9I	AATT	3 cut(s)	194, 209, 532
SseBI	AGGCCT	1 cut(s)	474
SsiI	CCGC	5 cut(s)	56, 60, 62, 382, 551
SspI	AATATT	1 cut(s)	164
SspMI	CTAG	2 cut(s)	687, 748
StuI	AGGCCT	1 cut(s)	474
StyD4I	CCNGG	1 cut(s)	138
StyI	CCWWGG	1 cut(s)	457
TaaI	ACNGT	2 cut(s)	325, 433
TaiI	ACGT	2 cut(s)	280, 439
TaqI	TCGA	3 cut(s)	235, 243, 265
TasI	AATT	3 cut(s)	194, 209, 532
TauI	GCSGC	3 cut(s)	59, 62, 65
TfiI	GAWTC	3 cut(s)	205, 267, 401
Tru1I	TTAA	2 cut(s)	596, 645
Tru9I	TTAA	2 cut(s)	596, 645
TscAI	CASTG	1 cut(s)	256
TseI	GCWGC	2 cut(s)	548, 590
TspDTI	ATGAA	3 cut(s)	145, 243, 327
TspRI	CASTG	1 cut(s)	256
Vha464I	CTTAAG	1 cut(s)	644
VpaK11BI	GGWCC	1 cut(s)	43
XagI	CCTNNNNNAGG	1 cut(s)	644
XceI	RCATGY	2 cut(s)	564, 737
XmiI	GTMKAC	1 cut(s)	453
XspI	CTAG	2 cut(s)	687, 748
Zsp2I	ATGCAT	2 cut(s)	29, 106

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.