Prupe.3G122700_v2.0.a1

Belongs to the peptidase C1 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
10956940 .. 10958192
1253 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G122700.1

Sequence Viewer

Length: 1038 bp
ATGGAGTCCATTAACCTGCAGCTGTGCAAATTCTGTACTTGTCTGGCGTTAATCATCATGTTGGGTGCATGGTCTTCTGAAGCCACTTCTCGTAGTCTTCAAGATGCATCCATGTATGGGAGACACGAACAGTGGATGACTCGTTATGGGCGTGTATATACCGACAATGAAGAGAAAGAAAAACGTTTCAAGATATTTAAGGAAAATGTTGCATATATAGAATCTTCCAACGCCGATACAAGCAAACCTTACAAATTAAGAGTCAATCAATTTACAGACCTTACAAATGAAGAATTCATAGCCTCAAGAAATAGATTCAAGGGGCATGAATGTTCCACAAAAACGACTTCCTTCAAGTATGAAAATGTTACGACATCGGTGCCAGCTACGATGGATTGGAGAAAGAAAGGAGCTGTAACACCCATCAAGGACCAAGGCCAATGTGGATGTTGTTGGGCATTTTCAGCAGTGGCAGCTACAGAAGGAATTACTCAACTTACAACTGGTAAACTGGTCTCTTTGTCTGAGCAAGAGCTTGTTGATTGCGACACCAAAGGTGTAGACCAAGGTTGTGAGGGTGGTTTAATGGATGATGCCTTTCAGTTCATCCAACAAAATCATGGGCTTAGCACAGAAGCTAACTACCCCTACAACGGTGTTGATGGTACATGCAACACCAAGAAGGAAGCTAACATTGCAGCCAAGATAACTGGCCACGAAGATGTTCCCGCAAACGACGAAAAGGCCCTTCTTAACGCGGTCGCTCATCAACCTGTTTCTGTTGCCATTGACGCTAGTGGTTCTGACTTCCAATTCTATTCAAGTGGTGTCTTTACAGGAACTTGCGGAACGAGCCTAGACCATGGTGTTACGGCTGTTGGTTATGGAGTCAGTGATGATGGGACTAAGTATTGGTTGGTGAAAAACTCATGGGGCACGGAATGGGGTGAAGAAGGATACATAAGAATGCAAAGAGATGTTGATGCTAAGGAAGGCCTATGTGGCATTGCTATGGAAGCCTCTTACCCCACTGCATAG

Protein Analysis

346

Amino Acids

37.96

Weight (kDa)

5.0

Isoelectric Point (pI)

23.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000141)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22160
fragaria_vesca FvH4_1g23580 FvH4_1g25982 FvH4_2g17070 FvH4_3g40500 FvH4_6g27180 FvH4_6g27320 FvH4_6g33300 FvH4_6g33310 FvH4_7g09480 FvH4_7g13000 FvH4_7g13320 FvH4_7g13600
malus_domestica MD00G1208000.v1.1 MD09G1238200.v1.1 MD09G1238600.v1.1 MD09G1238800.v1.1 MD09G1239100.v1.1 MD16G1226900.v1.1 MD16G1242700.v1.1 MD16G1244200.v1.1 MD16G1245500.v1.1 MD16G1245800.v1.1 MD17G1231600.v1.1 MD17G1231700.v1.1 MD17G1231800.v1.1 MD17G1232200.v1.1 MD17G1232300.v1.1 MD17G1232400.v1.1
prunus_persica Prupe.1G072300_v2.0.a1 Prupe.1G072400_v2.0.a1 Prupe.3G106300_v2.0.a1 Prupe.3G106400_v2.0.a1 Prupe.3G119400_v2.0.a1 Prupe.3G120600_v2.0.a1 Prupe.3G121900_v2.0.a1 Prupe.3G122000_v2.0.a1 Prupe.3G122100_v2.0.a1 Prupe.3G122200_v2.0.a1 Prupe.3G122700_v2.0.a1 Prupe.5G055900_v2.0.a1 Prupe.5G056500_v2.0.a1
pyrus_communis pycom09g15770 pycom09g15780 pycom09g15790 pycom16g20640 pycom17g18390
rosa_chinensis RchiOBHm_Chr1g0352141 RchiOBHm_Chr1g0352581 RchiOBHm_Chr1g0352601 RchiOBHm_Chr1g0352621 RchiOBHm_Chr1g0352631 RchiOBHm_Chr2g0119131 RchiOBHm_Chr2g0128691 RchiOBHm_Chr2g0128701 RchiOBHm_Chr2g0129151 RchiOBHm_Chr2g0129221 RchiOBHm_Chr2g0129401 RchiOBHm_Chr2g0129421 RchiOBHm_Chr2g0129431 RchiOBHm_Chr2g0129471 RchiOBHm_Chr2g0129481 RchiOBHm_Chr2g0129491 RchiOBHm_Chr2g0143051 RchiOBHm_Chr2g0143121 RchiOBHm_Chr2g0143171 RchiOBHm_Chr3g0457341 RchiOBHm_Chr5g0049011 RchiOBHm_Chr6g0281281 RchiOBHm_Chr6g0281311
rosa_laevigata RLG00000012975 RLG00000012976 RLG00000012979 RLG00000018447 RLG00000019018 RLG00000019061 RLG00000019066 RLG00000019078 RLG00000019079 RLG00000019080 RLG00000019083 RLG00000019085 RLG00000020009 RLG00000020010 RLG00000025234 RLG00000028326 RLG00000028327 RLG00000028328 RLG00000028329 RLG00000028357 RLG00000031784
rosa_multiflora Rmu_co8169188.1_g000001 Rmu_co8261007.1_g000001 Rmu_co8314361.1_g000001 Rmu_sc0000109.1_g000014 Rmu_sc0000638.1_g000020 Rmu_sc0000847.1_g000020 Rmu_sc0000847.1_g000028 Rmu_sc0000847.1_g000037 Rmu_sc0000847.1_g000046 Rmu_sc0000911.1_g000034 Rmu_sc0000999.1_g000021 Rmu_sc0001171.1_g000013 Rmu_sc0001171.1_g000018 Rmu_sc0001171.1_g000019 Rmu_sc0001653.1_g000004 Rmu_sc0002277.1_g000005 Rmu_sc0003479.1_g000001 Rmu_sc0005118.1_g000006 Rmu_sc0005118.1_g000008 Rmu_sc0005227.1_g000012 Rmu_sc0005442.1_g000010 Rmu_sc0005514.1_g000005 Rmu_sc0005996.1_g000014 Rmu_sc0008800.1_g000002 Rmu_sc0008800.1_g000010 Rmu_sc0008800.1_g000014
rosa_roxburghii Rroxscaffold_1G00065560 Rroxscaffold_2G00102080 Rroxscaffold_2G00102090 Rroxscaffold_2G00102110 Rroxscaffold_2G00114560 Rroxscaffold_2G00114570 Rroxscaffold_2G00114610 Rroxscaffold_2G00114620 Rroxscaffold_2G00114640 Rroxscaffold_2G00114740 Rroxscaffold_2G00114790 Rroxscaffold_2G00115860 Rroxscaffold_2G00124490 Rroxscaffold_4G00302260 Rroxscaffold_4G00302530 Rroxscaffold_4G00302550 Rroxscaffold_4G00302560 Rroxscaffold_4G00302620 Rroxscaffold_6G00421980 Rroxscaffold_7G00187140 Rroxscaffold_7G00187170
rosa_rugosa Rorug01G0225000 Rorug01G0230200 Rorug02G0220500 Rorug02G0280000 Rorug02G0285200 Rorug02G0285400 Rorug02G0286300 Rorug02G0286300 Rorug02G0286400 Rorug02G0286900 Rorug02G0377800 Rorug02G0377900 Rorug02G0378000 Rorug02G0378000 Rorug02G0378800 Rorug03G0019800 Rorug04G0452700 Rorug06G0140300 Rorug06G0140500 Rorug06G0140600
rosa_samantha Rh1CG223600 Rh1CG227200 Rh1CG227500 Rh1CG227600 Rh2BG341200 Rh2BG345300 Rh2BG440200 Rh2DG284500 Rh2DG357900 Rh2DG362100 Rh2DG362600 Rh2DG364500 Rh2DG364600 Rh2DG364700 Rh2DG364800 Rh2DG364900 Rh2DG365000 Rh2DG365400 Rh2DG450400 Rh3AG080000 Rh3BG081900 Rh5AG322100 Rh5BG079800 Rh6AG252100 Rh6BG255600
rosa_wichuraiana Rw1G020770 Rw1G021290 Rw2G022120 Rw2G026940 Rw2G027360 Rw2G027370 Rw2G027950 Rw2G027960 Rw2G027970 Rw2G035220 Rw3G006890 Rw6G021900 Rw6G021930 Rw6G021950 Rw6G021970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 24
AccB1I GGYRCC 1 cut(s) 379
AccI GTMKAC 1 cut(s) 561
AccII CGCG 1 cut(s) 758
AciI CCGC 3 cut(s) 729, 758, 846
AclI AACGTT 1 cut(s) 184
AcoI YGGCCR 1 cut(s) 712
AcsI RAATTY 2 cut(s) 29, 293
AcuI CTGAAG 1 cut(s) 99
AfaI GTAC 2 cut(s) 37, 667
AfiI CCNNNNNNNGG 2 cut(s) 117, 653
AgsI TTSAA 5 cut(s) 101, 190, 319, 355, 822
AluBI AGCT 7 cut(s) 22, 386, 413, 476, 535, 638, 689
AluI AGCT 7 cut(s) 22, 386, 413, 476, 535, 638, 689
Alw26I GTCTC 2 cut(s) 115, 520
AoxI GGCC 4 cut(s) 436, 712, 744, 994
ApeKI GCWGC 3 cut(s) 19, 473, 698
ApoI RAATTY 2 cut(s) 29, 293
ArsI GACNNNNNNTTYG 2 cut(s) 246, 278
Asp700I GAANNNNTTC 1 cut(s) 723
AspS9I GGNCC 2 cut(s) 430, 745
AsuHPI GGTGA 2 cut(s) 931, 959
AvaII GGWCC 1 cut(s) 430
BaeGI GKGCMC 1 cut(s) 938
BalI TGGCCA 1 cut(s) 714
BanI GGYRCC 1 cut(s) 379
BbsI GAAGAC 2 cut(s) 66, 89
BbvI GCAGC 3 cut(s) 31, 485, 710
BccI CCATC 4 cut(s) 385, 431, 656, 893
BceAI ACGGC 1 cut(s) 888
BcgI CGANNNNNNTGC 2 cut(s) 361, 395
BciVI GTATCC 1 cut(s) 950
BcoDI GTCTC 2 cut(s) 115, 520
BfaI CTAG 2 cut(s) 795, 857
BfmI CTRYAG 2 cut(s) 17, 477
BfuAI ACCTGC 1 cut(s) 24
BfuI GTATCC 1 cut(s) 950
BglI GCCNNNNNGGC 1 cut(s) 1002
BisI GCNGC 3 cut(s) 20, 474, 699
BlpI GCTNAGC 1 cut(s) 626
BlsI GCNGC 3 cut(s) 21, 475, 700
Bme18I GGWCC 1 cut(s) 430
BmgT120I GGNCC 2 cut(s) 430, 745
BmiI GGNNCC 1 cut(s) 381
BmsI GCATC 4 cut(s) 94, 116, 583, 973
BpiI GAAGAC 2 cut(s) 66, 89
Bpu10I CCTNAGC 1 cut(s) 987
Bpu1102I GCTNAGC 1 cut(s) 626
BpuEI CTTGAG 1 cut(s) 289
BsaI GGTCTC 1 cut(s) 520
BsaJI CCNNGG 3 cut(s) 433, 565, 862
Bsc4I CCNNNNNNNGG 2 cut(s) 117, 653
Bse1I ACTGG 3 cut(s) 508, 516, 715
Bse3DI GCAATG 2 cut(s) 693, 1005
BseDI CCNNGG 3 cut(s) 433, 565, 862
BseGI GGATG 5 cut(s) 107, 141, 452, 595, 606
BseLI CCNNNNNNNGG 2 cut(s) 117, 653
BseMI GCAATG 2 cut(s) 693, 1005
BseMII CTCAG 1 cut(s) 516
BseNI ACTGG 3 cut(s) 508, 516, 715
BseSI GKGCMC 1 cut(s) 938
BseXI GCAGC 3 cut(s) 31, 485, 710
Bsh1236I CGCG 1 cut(s) 758
Bsh1285I CGRYCG 1 cut(s) 762
BshFI GGCC 4 cut(s) 438, 714, 746, 996
BshNI GGYRCC 1 cut(s) 379
BsiEI CGRYCG 1 cut(s) 762
BslFI GGGAC 1 cut(s) 916
BslI CCNNNNNNNGG 2 cut(s) 117, 653
BsmAI GTCTC 2 cut(s) 115, 520
BsmFI GGGAC 1 cut(s) 916
BsmI GAATGC 1 cut(s) 972
BsnI GGCC 4 cut(s) 438, 714, 746, 996
Bso31I GGTCTC 1 cut(s) 520
Bsp1286I GDGCHC 1 cut(s) 938
Bsp1720I GCTNAGC 1 cut(s) 626
Bsp19I CCATGG 1 cut(s) 862
BspACI CCGC 3 cut(s) 729, 758, 846
BspANI GGCC 4 cut(s) 438, 714, 746, 996
BspCNI CTCAG 1 cut(s) 517
BspFNI CGCG 1 cut(s) 758
BspLI GGNNCC 1 cut(s) 381
BspMAI CTGCAG 1 cut(s) 21
BspMI ACCTGC 1 cut(s) 24
BspT107I GGYRCC 1 cut(s) 379
BspTNI GGTCTC 1 cut(s) 520
BsrDI GCAATG 2 cut(s) 693, 1005
BsrI ACTGG 3 cut(s) 508, 516, 715
BssECI CCNNGG 3 cut(s) 433, 565, 862
BssT1I CCWWGG 3 cut(s) 433, 565, 862
Bst4CI ACNGT 2 cut(s) 132, 656
Bst6I CTCTTC 1 cut(s) 165
BstC8I GCNNGC 1 cut(s) 384
BstDEI CTNAG 4 cut(s) 525, 626, 906, 987
BstDSI CCRYGG 1 cut(s) 862
BstF5I GGATG 5 cut(s) 107, 141, 452, 595, 606
BstFNI CGCG 1 cut(s) 758
BstMAI GTCTC 2 cut(s) 115, 520
BstMCI CGRYCG 1 cut(s) 762
BstMWI GCNNNNNNNGC 7 cut(s) 464, 473, 695, 791, 852, 1002, 1016
BstNSI RCATGY 1 cut(s) 672
BstSFI CTRYAG 2 cut(s) 17, 477
BstSLI GKGCMC 1 cut(s) 938
BstUI CGCG 1 cut(s) 758
BstV1I GCAGC 3 cut(s) 31, 485, 710
BstV2I GAAGAC 2 cut(s) 66, 89
BsuI GTATCC 1 cut(s) 950
BsuRI GGCC 4 cut(s) 438, 714, 746, 996
BtgI CCRYGG 1 cut(s) 862
BtsCI GGATG 5 cut(s) 107, 141, 452, 595, 606
BtsI GCAGTG 2 cut(s) 474, 1029
BtsIMutI CAGTG 4 cut(s) 137, 474, 898, 1029
BveI ACCTGC 1 cut(s) 24
Cac8I GCNNGC 1 cut(s) 384
Cfr13I GGNCC 2 cut(s) 430, 745
CseI GACGC 1 cut(s) 800
Csp6I GTAC 2 cut(s) 36, 666
CviAII CATG 8 cut(s) 58, 69, 112, 326, 620, 669, 863, 930
CviQI GTAC 2 cut(s) 36, 666
DdeI CTNAG 4 cut(s) 525, 626, 906, 987
EaeI YGGCCR 1 cut(s) 712
Eam1104I CTCTTC 1 cut(s) 165
EarI CTCTTC 1 cut(s) 165
Eco130I CCWWGG 3 cut(s) 433, 565, 862
Eco147I AGGCCT 1 cut(s) 996
Eco31I GGTCTC 1 cut(s) 520
Eco47I GGWCC 1 cut(s) 430
Eco57I CTGAAG 1 cut(s) 99
EcoO109I RGGNCCY 1 cut(s) 745
EcoRI GAATTC 1 cut(s) 293
EcoT14I CCWWGG 3 cut(s) 433, 565, 862
EcoT22I ATGCAT 1 cut(s) 109
ErhI CCWWGG 3 cut(s) 433, 565, 862
FaeI CATG 8 cut(s) 61, 72, 115, 329, 623, 672, 866, 933
FalI AAGNNNNNCTT 2 cut(s) 232, 264
FaqI GGGAC 1 cut(s) 916
FatI CATG 8 cut(s) 57, 68, 111, 325, 619, 668, 862, 929
FauI CCCGC 1 cut(s) 736
FblI GTMKAC 1 cut(s) 561
Fnu4HI GCNGC 3 cut(s) 20, 474, 699
FokI GGATG 5 cut(s) 94, 148, 459, 593, 602
Fsp4HI GCNGC 3 cut(s) 20, 474, 699
FspBI CTAG 2 cut(s) 795, 857
GluI GCNGC 3 cut(s) 20, 474, 699
HaeIII GGCC 4 cut(s) 438, 714, 746, 996
HgaI GACGC 1 cut(s) 800
Hin1II CATG 8 cut(s) 61, 72, 115, 329, 623, 672, 866, 933
HinfI GANTC 6 cut(s) 5, 139, 221, 261, 315, 888
HphI GGTGA 2 cut(s) 931, 959
Hpy166II GTNNAC 2 cut(s) 509, 562
Hpy188I TCNGA 3 cut(s) 79, 526, 805
Hpy188III TCNNGA 3 cut(s) 101, 190, 306
Hpy8I GTNNAC 2 cut(s) 509, 562
Hpy99I CGWCG 1 cut(s) 740
HpyAV CCTTC 6 cut(s) 361, 476, 676, 758, 947, 986
HpyCH4III ACNGT 2 cut(s) 132, 656
HpyCH4IV ACGT 1 cut(s) 184
HpyCH4V TGCA 9 cut(s) 19, 27, 68, 107, 212, 672, 698, 970, 1034
HpyF10VI GCNNNNNNNGC 7 cut(s) 464, 473, 695, 791, 852, 1002, 1016
HpyF3I CTNAG 4 cut(s) 525, 626, 906, 987
HpySE526I ACGT 1 cut(s) 184
Hsp92II CATG 8 cut(s) 61, 72, 115, 329, 623, 672, 866, 933
LmnI GCTCC 1 cut(s) 410
LpnPI CCDG 8 cut(s) 29, 29, 396, 489, 497, 696, 786, 822
Lsp1109I GCAGC 3 cut(s) 31, 485, 710
LweI GCATC 4 cut(s) 94, 116, 583, 973
MaeI CTAG 2 cut(s) 795, 857
MaeII ACGT 1 cut(s) 184
MaeIII GTNAC 3 cut(s) 367, 415, 868
MboII GAAGA 7 cut(s) 66, 89, 182, 216, 302, 731, 962
MhlI GDGCHC 1 cut(s) 938
MlsI TGGCCA 1 cut(s) 714
MluCI AATT 6 cut(s) 29, 254, 269, 293, 486, 812
MluNI TGGCCA 1 cut(s) 714
MlyI GAGTC 4 cut(s) 14, 133, 270, 897
MmeI TCCRAC 2 cut(s) 252, 634
MnlI CCTC 3 cut(s) 313, 568, 1030
Mox20I TGGCCA 1 cut(s) 714
Mph1103I ATGCAT 1 cut(s) 109
MroXI GAANNNNTTC 1 cut(s) 723
MscI TGGCCA 1 cut(s) 714
MseI TTAA 6 cut(s) 12, 50, 198, 257, 584, 753
MslI CAYNNNNRTG 3 cut(s) 720, 965, 1010
Msp20I TGGCCA 1 cut(s) 714
MspA1I CMGCKG 1 cut(s) 22
Mva1269I GAATGC 1 cut(s) 972
MvnI CGCG 1 cut(s) 758
MwoI GCNNNNNNNGC 7 cut(s) 464, 473, 695, 791, 852, 1002, 1016
NcoI CCATGG 1 cut(s) 862
NlaIII CATG 8 cut(s) 61, 72, 115, 329, 623, 672, 866, 933
NlaIV GGNNCC 1 cut(s) 381
NsiI ATGCAT 1 cut(s) 109
NspI RCATGY 1 cut(s) 672
PceI AGGCCT 1 cut(s) 996
PcsI WCGNNNNNNNCGW 1 cut(s) 148
PctI GAATGC 1 cut(s) 972
PdmI GAANNNNTTC 1 cut(s) 723
PfeI GAWTC 2 cut(s) 221, 315
PkrI GCNGC 3 cut(s) 21, 475, 700
PleI GAGTC 4 cut(s) 13, 133, 269, 896
PpsI GAGTC 4 cut(s) 13, 133, 269, 896
Psp1406I AACGTT 1 cut(s) 184
PspN4I GGNNCC 1 cut(s) 381
PspPI GGNCC 2 cut(s) 430, 745
PstI CTGCAG 1 cut(s) 21
PvuII CAGCTG 1 cut(s) 22
RsaI GTAC 2 cut(s) 37, 667
RsaNI GTAC 2 cut(s) 36, 666
RseI CAYNNNNRTG 3 cut(s) 720, 965, 1010
SaqAI TTAA 6 cut(s) 12, 50, 198, 257, 584, 753
SatI GCNGC 3 cut(s) 20, 474, 699
Sau96I GGNCC 2 cut(s) 430, 745
SchI GAGTC 4 cut(s) 14, 133, 270, 897
SduI GDGCHC 1 cut(s) 938
SfaNI GCATC 4 cut(s) 94, 116, 583, 973
SfcI CTRYAG 2 cut(s) 17, 477
SinI GGWCC 1 cut(s) 430
SmiMI CAYNNNNRTG 3 cut(s) 720, 965, 1010
SmlI CTYRAG 1 cut(s) 304
SmoI CTYRAG 1 cut(s) 304
Sse9I AATT 6 cut(s) 29, 254, 269, 293, 486, 812
SseBI AGGCCT 1 cut(s) 996
SsiI CCGC 3 cut(s) 729, 758, 846
SspMI CTAG 2 cut(s) 795, 857
StuI AGGCCT 1 cut(s) 996
StyI CCWWGG 3 cut(s) 433, 565, 862
TaaI ACNGT 2 cut(s) 132, 656
TaiI ACGT 1 cut(s) 187
TasI AATT 6 cut(s) 29, 254, 269, 293, 486, 812
TatI WGTACW 1 cut(s) 35
TfiI GAWTC 2 cut(s) 221, 315
Tru1I TTAA 6 cut(s) 12, 50, 198, 257, 584, 753
Tru9I TTAA 6 cut(s) 12, 50, 198, 257, 584, 753
TscAI CASTG 4 cut(s) 137, 474, 898, 1036
TseI GCWGC 3 cut(s) 19, 473, 698
TspDTI ATGAA 6 cut(s) 183, 286, 303, 342, 375, 595
TspGWI ACGGA 1 cut(s) 953
TspRI CASTG 4 cut(s) 137, 474, 898, 1036
VpaK11BI GGWCC 1 cut(s) 430
XapI RAATTY 2 cut(s) 29, 293
XceI RCATGY 1 cut(s) 672
XcmI CCANNNNNNNNNTGG 2 cut(s) 440, 617
XmiI GTMKAC 1 cut(s) 561
XmnI GAANNNNTTC 1 cut(s) 723
XspI CTAG 2 cut(s) 795, 857
Zsp2I ATGCAT 1 cut(s) 109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.