Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000141

Physical Location & Seq

Genomic Coordinates Forward (+)

40680639 .. 40681833

Gene Structure 1195 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00114570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1029 bp

ATGGAGTTATTCACCAACCAGTTATGCAAGTGTATCCATTTGGCATTGATCCTTATGTTGGCAGCCTGGTCATCTGAAGCCACCTCTCGCAGTCTCCAAGATGTATCAATGTTTGCAAGATACGAGCAATGGATGGCACGCTATGGACGTGTGTTCAACGACATTAACGAGAAGGACAAGCGATTCAATATATTCAAAGAAAATGTGGAATTTATAGAATCTTCCAATGATGCAGGAAACAAACTCTATAAATTGAGTGTGAATCAATTTGCAGACCTTACAAATGAAGAACTCACAGCCTCCAGAAATCGGTTCAAAGGGCATGAGTGTTCCACAAAGACCACTACTTTCAGGTATGAAAATGCTAGTGTGCCGGCTACAATGGACTGGAGACAGAAAGGAGCTGTAACTCCCGTCAAGGACCAAGGCCAATGTGGGTCCTGTTGGGCGTTCTCAGCCGTGGCAGCCATGGAAGGAATTACTCAACTTACAACTGGTAAATTGATTTCTTTGTCTGAGCAAGAGCTAGTTGACTGTGATGTCAATGGTGAAGCCCAAGGCTGTTGGGGTGGCTTAATGGATGATGCATTTCGGTTCATCTATGAAAACCATGGACTTAGCACCGAGGCTAATTATCCCTACACCGGTGTTGAGGGTACATGCAATGCCAAGAAGGAAGCAAACCATGCAGCCTCGATAACTGGCCACGAAGATGTGCCTGCAAACAGTGAAAGCGCACTTCTTAAGGCTGTTGCCAATCAACCTATTTCTGTTTATATTGATGCTAGTGGATCTGATTTCCAATTCTATTCAAGTGGTGTTTTCACAGGAACCTGTGGAACGAGCCTAGACCATGGTGTTACTGCTGTTGGTTATGGCATCAGCGATGATGGGACTAAGTATTGGTTGGTTAAGAACTCATGGGGTACAGAATGGGGAGAAGAAGGTTACATAAGAATGCAAAGAGATGTTGCTTCACAGGAAGGTCTCTGTGGTATTGCTATGGAAGCCTCTTACCCTACTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000323 GO:0000325 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009505 GO:0009555 GO:0009605 GO:0009607 GO:0009620 GO:0009626 GO:0009791 GO:0009908 GO:0009987 GO:0010623 GO:0012501 GO:0012505 GO:0016787 GO:0019538 GO:0022414 GO:0030154 GO:0030163 GO:0030312 GO:0032501 GO:0032502 GO:0033554 GO:0034050 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048468 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050832 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0070011 GO:0071704 GO:0071944 GO:0090567 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I29 Peptidase_C1

Protein Analysis

342

Amino Acids

37.68

Weight (kDa)

4.82

Isoelectric Point (pI)

25.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I29	PF08246	41 - 98	6.7e-19	Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1	PF00112	124 - 341	3e-83	Papain family cysteine protease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22160
fragaria_vesca	FvH4_1g23580 FvH4_1g25982 FvH4_2g17070 FvH4_3g40500 FvH4_6g27180 FvH4_6g27320 FvH4_6g33300 FvH4_6g33310 FvH4_7g09480 FvH4_7g13000 FvH4_7g13320 FvH4_7g13600
malus_domestica	MD00G1208000.v1.1 MD09G1238200.v1.1 MD09G1238600.v1.1 MD09G1238800.v1.1 MD09G1239100.v1.1 MD16G1226900.v1.1 MD16G1242700.v1.1 MD16G1244200.v1.1 MD16G1245500.v1.1 MD16G1245800.v1.1 MD17G1231600.v1.1 MD17G1231700.v1.1 MD17G1231800.v1.1 MD17G1232200.v1.1 MD17G1232300.v1.1 MD17G1232400.v1.1
prunus_persica	Prupe.1G072300_v2.0.a1 Prupe.1G072400_v2.0.a1 Prupe.3G106300_v2.0.a1 Prupe.3G106400_v2.0.a1 Prupe.3G119400_v2.0.a1 Prupe.3G120600_v2.0.a1 Prupe.3G121900_v2.0.a1 Prupe.3G122000_v2.0.a1 Prupe.3G122100_v2.0.a1 Prupe.3G122200_v2.0.a1 Prupe.3G122700_v2.0.a1 Prupe.5G055900_v2.0.a1 Prupe.5G056500_v2.0.a1
pyrus_communis	pycom09g15770 pycom09g15780 pycom09g15790 pycom16g20640 pycom17g18390
rosa_chinensis	RchiOBHm_Chr1g0352141 RchiOBHm_Chr1g0352581 RchiOBHm_Chr1g0352601 RchiOBHm_Chr1g0352621 RchiOBHm_Chr1g0352631 RchiOBHm_Chr2g0119131 RchiOBHm_Chr2g0128691 RchiOBHm_Chr2g0128701 RchiOBHm_Chr2g0129151 RchiOBHm_Chr2g0129221 RchiOBHm_Chr2g0129401 RchiOBHm_Chr2g0129421 RchiOBHm_Chr2g0129431 RchiOBHm_Chr2g0129471 RchiOBHm_Chr2g0129481 RchiOBHm_Chr2g0129491 RchiOBHm_Chr2g0143051 RchiOBHm_Chr2g0143121 RchiOBHm_Chr2g0143171 RchiOBHm_Chr3g0457341 RchiOBHm_Chr5g0049011 RchiOBHm_Chr6g0281281 RchiOBHm_Chr6g0281311
rosa_laevigata	RLG00000012975 RLG00000012976 RLG00000012979 RLG00000018447 RLG00000019018 RLG00000019061 RLG00000019066 RLG00000019078 RLG00000019079 RLG00000019080 RLG00000019083 RLG00000019085 RLG00000020009 RLG00000020010 RLG00000025234 RLG00000028326 RLG00000028327 RLG00000028328 RLG00000028329 RLG00000028357 RLG00000031784
rosa_multiflora	Rmu_co8169188.1_g000001 Rmu_co8261007.1_g000001 Rmu_co8314361.1_g000001 Rmu_sc0000109.1_g000014 Rmu_sc0000638.1_g000020 Rmu_sc0000847.1_g000020 Rmu_sc0000847.1_g000028 Rmu_sc0000847.1_g000037 Rmu_sc0000847.1_g000046 Rmu_sc0000911.1_g000034 Rmu_sc0000999.1_g000021 Rmu_sc0001171.1_g000013 Rmu_sc0001171.1_g000018 Rmu_sc0001171.1_g000019 Rmu_sc0001653.1_g000004 Rmu_sc0002277.1_g000005 Rmu_sc0003479.1_g000001 Rmu_sc0005118.1_g000006 Rmu_sc0005118.1_g000008 Rmu_sc0005227.1_g000012 Rmu_sc0005442.1_g000010 Rmu_sc0005514.1_g000005 Rmu_sc0005996.1_g000014 Rmu_sc0008800.1_g000002 Rmu_sc0008800.1_g000010 Rmu_sc0008800.1_g000014
rosa_roxburghii	Rroxscaffold_1G00065560 Rroxscaffold_2G00102080 Rroxscaffold_2G00102090 Rroxscaffold_2G00102110 Rroxscaffold_2G00114560 Rroxscaffold_2G00114570 Rroxscaffold_2G00114610 Rroxscaffold_2G00114620 Rroxscaffold_2G00114640 Rroxscaffold_2G00114740 Rroxscaffold_2G00114790 Rroxscaffold_2G00115860 Rroxscaffold_2G00124490 Rroxscaffold_4G00302260 Rroxscaffold_4G00302530 Rroxscaffold_4G00302550 Rroxscaffold_4G00302560 Rroxscaffold_4G00302620 Rroxscaffold_6G00421980 Rroxscaffold_7G00187140 Rroxscaffold_7G00187170
rosa_rugosa	Rorug01G0225000 Rorug01G0230200 Rorug02G0220500 Rorug02G0280000 Rorug02G0285200 Rorug02G0285400 Rorug02G0286300 Rorug02G0286300 Rorug02G0286400 Rorug02G0286900 Rorug02G0377800 Rorug02G0377900 Rorug02G0378000 Rorug02G0378000 Rorug02G0378800 Rorug03G0019800 Rorug04G0452700 Rorug06G0140300 Rorug06G0140500 Rorug06G0140600
rosa_samantha	Rh1CG223600 Rh1CG227200 Rh1CG227500 Rh1CG227600 Rh2BG341200 Rh2BG345300 Rh2BG440200 Rh2DG284500 Rh2DG357900 Rh2DG362100 Rh2DG362600 Rh2DG364500 Rh2DG364600 Rh2DG364700 Rh2DG364800 Rh2DG364900 Rh2DG365000 Rh2DG365400 Rh2DG450400 Rh3AG080000 Rh3BG081900 Rh5AG322100 Rh5BG079800 Rh6AG252100 Rh6BG255600
rosa_wichuraiana	Rw1G020770 Rw1G021290 Rw2G022120 Rw2G026940 Rw2G027360 Rw2G027370 Rw2G027950 Rw2G027960 Rw2G027970 Rw2G035220 Rw3G006890 Rw6G021900 Rw6G021930 Rw6G021950 Rw6G021970

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	539
AclWI	GGATC	2 cut(s)	43, 799
AcoI	YGGCCR	1 cut(s)	703
AcsI	RAATTY	1 cut(s)	209
AcuI	CTGAAG	1 cut(s)	96
AfaI	GTAC	2 cut(s)	658, 928
AfiI	CCNNNNNNNGG	3 cut(s)	58, 309, 644
AflII	CTTAAG	1 cut(s)	743
AflIII	ACRYGT	1 cut(s)	148
AgeI	ACCGGT	1 cut(s)	644
AgsI	TTSAA	5 cut(s)	157, 187, 196, 316, 813
AjiI	CACGTC	1 cut(s)	149
AjnI	CCWGG	1 cut(s)	65
AluBI	AGCT	2 cut(s)	404, 526
AluI	AGCT	2 cut(s)	404, 526
Alw26I	GTCTC	3 cut(s)	98, 385, 992
AlwI	GGATC	2 cut(s)	43, 799
AoxI	GGCC	2 cut(s)	427, 703
ApeKI	GCWGC	3 cut(s)	62, 464, 689
ApoI	RAATTY	1 cut(s)	209
AsiGI	ACCGGT	1 cut(s)	644
AspLEI	GCGC	1 cut(s)	737
AspS9I	GGNCC	2 cut(s)	421, 438
AsuHPI	GGTGA	2 cut(s)	4, 560
AvaII	GGWCC	2 cut(s)	421, 438
BalI	TGGCCA	1 cut(s)	705
BbvI	GCAGC	3 cut(s)	74, 476, 701
BccI	CCATC	2 cut(s)	127, 884
BceAI	ACGGC	1 cut(s)	443
BciT130I	CCWGG	1 cut(s)	67
BciVI	GTATCC	1 cut(s)	44
BcoDI	GTCTC	3 cut(s)	98, 385, 992
BfaI	CTAG	4 cut(s)	366, 527, 786, 848
BfrI	CTTAAG	1 cut(s)	743
BfuI	GTATCC	1 cut(s)	44
BisI	GCNGC	3 cut(s)	63, 465, 690
BlsI	GCNGC	3 cut(s)	64, 466, 691
Bme1390I	CCNGG	1 cut(s)	67
Bme18I	GGWCC	2 cut(s)	421, 438
BmgBI	CACGTC	1 cut(s)	149
BmgT120I	GGNCC	2 cut(s)	421, 438
BmiI	GGNNCC	2 cut(s)	439, 832
BmrFI	CCNGG	1 cut(s)	67
BmsI	GCATC	4 cut(s)	220, 574, 772, 888
BpmI	CTGGAG	2 cut(s)	286, 409
BsaI	GGTCTC	1 cut(s)	992
BsaJI	CCNNGG	7 cut(s)	424, 459, 468, 556, 610, 624, 853
BsaWI	WCCGGW	1 cut(s)	644
Bsc4I	CCNNNNNNNGG	3 cut(s)	58, 309, 644
Bse118I	RCCGGY	2 cut(s)	373, 644
Bse1I	ACTGG	4 cut(s)	19, 392, 499, 706
Bse3DI	GCAATG	2 cut(s)	134, 670
BseBI	CCWGG	1 cut(s)	67
BseDI	CCNNGG	7 cut(s)	424, 459, 468, 556, 610, 624, 853
BseGI	GGATG	2 cut(s)	138, 586
BseLI	CCNNNNNNNGG	3 cut(s)	58, 309, 644
BseMI	GCAATG	2 cut(s)	134, 670
BseMII	CTCAG	2 cut(s)	468, 507
BseNI	ACTGG	4 cut(s)	19, 392, 499, 706
BseXI	GCAGC	3 cut(s)	74, 476, 701
BshFI	GGCC	2 cut(s)	429, 705
BshTI	ACCGGT	1 cut(s)	644
BsiSI	CCGG	2 cut(s)	374, 645
BslFI	GGGAC	1 cut(s)	907
BslI	CCNNNNNNNGG	3 cut(s)	58, 309, 644
BsmAI	GTCTC	3 cut(s)	98, 385, 992
BsmFI	GGGAC	1 cut(s)	907
BsmI	GAATGC	1 cut(s)	963
BsnI	GGCC	2 cut(s)	429, 705
Bso31I	GGTCTC	1 cut(s)	992
Bsp143I	GATC	2 cut(s)	48, 791
Bsp19I	CCATGG	3 cut(s)	468, 610, 853
BspANI	GGCC	2 cut(s)	429, 705
BspCNI	CTCAG	2 cut(s)	467, 508
BspLI	GGNNCC	2 cut(s)	439, 832
BspPI	GGATC	2 cut(s)	43, 799
BspTI	CTTAAG	1 cut(s)	743
BspTNI	GGTCTC	1 cut(s)	992
BsrDI	GCAATG	2 cut(s)	134, 670
BsrFI	RCCGGY	2 cut(s)	373, 644
BsrI	ACTGG	4 cut(s)	19, 392, 499, 706
BssAI	RCCGGY	2 cut(s)	373, 644
BssECI	CCNNGG	7 cut(s)	424, 459, 468, 556, 610, 624, 853
BssMI	GATC	2 cut(s)	48, 791
BssT1I	CCWWGG	5 cut(s)	424, 468, 556, 610, 853
Bst2UI	CCWGG	1 cut(s)	67
Bst4CI	ACNGT	2 cut(s)	536, 728
BstAFI	CTTAAG	1 cut(s)	743
BstAPI	GCANNNNNTGC	1 cut(s)	686
BstC8I	GCNNGC	3 cut(s)	139, 375, 720
BstDEI	CTNAG	4 cut(s)	454, 516, 617, 897
BstDSI	CCRYGG	4 cut(s)	459, 468, 610, 853
BstF5I	GGATG	2 cut(s)	138, 586
BstHHI	GCGC	1 cut(s)	737
BstKTI	GATC	2 cut(s)	51, 794
BstMAI	GTCTC	3 cut(s)	98, 385, 992
BstMBI	GATC	2 cut(s)	48, 791
BstMWI	GCNNNNNNNGC	4 cut(s)	455, 464, 686, 1007
BstNI	CCWGG	1 cut(s)	67
BstNSI	RCATGY	1 cut(s)	663
BstSCI	CCNGG	1 cut(s)	65
BstV1I	GCAGC	3 cut(s)	74, 476, 701
BstX2I	RGATCY	1 cut(s)	791
BstYI	RGATCY	1 cut(s)	791
BsuI	GTATCC	1 cut(s)	44
BsuRI	GGCC	2 cut(s)	429, 705
BtgI	CCRYGG	4 cut(s)	459, 468, 610, 853
BtgZI	GCGATG	1 cut(s)	900
BtrI	CACGTC	1 cut(s)	149
BtsCI	GGATG	2 cut(s)	138, 586
BtsIMutI	CAGTG	1 cut(s)	733
Cac8I	GCNNGC	3 cut(s)	139, 375, 720
CfoI	GCGC	1 cut(s)	737
Cfr10I	RCCGGY	2 cut(s)	373, 644
Cfr13I	GGNCC	2 cut(s)	421, 438
Csp6I	GTAC	2 cut(s)	657, 927
CspAI	ACCGGT	1 cut(s)	644
CviAII	CATG	8 cut(s)	323, 469, 611, 660, 686, 854, 921, 1026
CviQI	GTAC	2 cut(s)	657, 927
DdeI	CTNAG	4 cut(s)	454, 516, 617, 897
DpnI	GATC	2 cut(s)	50, 793
DpnII	GATC	2 cut(s)	48, 791
DrdI	GACNNNNNNGTC	1 cut(s)	539
DseDI	GACNNNNNNGTC	1 cut(s)	539
EaeI	YGGCCR	1 cut(s)	703
Eco130I	CCWWGG	5 cut(s)	424, 468, 556, 610, 853
Eco31I	GGTCTC	1 cut(s)	992
Eco47I	GGWCC	2 cut(s)	421, 438
Eco57I	CTGAAG	1 cut(s)	96
EcoO109I	RGGNCCY	1 cut(s)	438
EcoRII	CCWGG	1 cut(s)	65
EcoT14I	CCWWGG	5 cut(s)	424, 468, 556, 610, 853
EcoT22I	ATGCAT	1 cut(s)	589
ErhI	CCWWGG	5 cut(s)	424, 468, 556, 610, 853
FaeI	CATG	8 cut(s)	326, 472, 614, 663, 689, 857, 924, 1029
FaqI	GGGAC	1 cut(s)	907
FatI	CATG	8 cut(s)	322, 468, 610, 659, 685, 853, 920, 1025
Fnu4HI	GCNGC	3 cut(s)	63, 465, 690
FokI	GGATG	2 cut(s)	145, 593
Fsp4HI	GCNGC	3 cut(s)	63, 465, 690
FspBI	CTAG	4 cut(s)	366, 527, 786, 848
GlaI	GCGC	1 cut(s)	736
GluI	GCNGC	3 cut(s)	63, 465, 690
GsuI	CTGGAG	2 cut(s)	286, 409
HaeIII	GGCC	2 cut(s)	429, 705
HapII	CCGG	2 cut(s)	374, 645
HhaI	GCGC	1 cut(s)	737
Hin1II	CATG	8 cut(s)	326, 472, 614, 663, 689, 857, 924, 1029
Hin6I	GCGC	1 cut(s)	735
HinP1I	GCGC	1 cut(s)	735
HincII	GTYRAC	1 cut(s)	532
HindII	GTYRAC	1 cut(s)	532
HinfI	GANTC	3 cut(s)	183, 218, 262
HpaII	CCGG	2 cut(s)	374, 645
HphI	GGTGA	2 cut(s)	4, 560
Hpy166II	GTNNAC	1 cut(s)	532
Hpy188I	TCNGA	3 cut(s)	76, 517, 796
Hpy188III	TCNNGA	1 cut(s)	303
Hpy8I	GTNNAC	1 cut(s)	532
HpyAV	CCTTC	5 cut(s)	166, 467, 667, 938, 977
HpyCH4III	ACNGT	2 cut(s)	536, 728
HpyCH4IV	ACGT	1 cut(s)	148
HpyF10VI	GCNNNNNNNGC	4 cut(s)	455, 464, 686, 1007
HpyF3I	CTNAG	4 cut(s)	454, 516, 617, 897
HpySE526I	ACGT	1 cut(s)	148
Hsp92II	CATG	8 cut(s)	326, 472, 614, 663, 689, 857, 924, 1029
HspAI	GCGC	1 cut(s)	735
KroI	GCCGGC	1 cut(s)	373
KroNI	GCCGGC	1 cut(s)	375
Kzo9I	GATC	2 cut(s)	48, 791
LmnI	GCTCC	1 cut(s)	401
Lsp1109I	GCAGC	3 cut(s)	74, 476, 701
LweI	GCATC	4 cut(s)	220, 574, 772, 888
MaeI	CTAG	4 cut(s)	366, 527, 786, 848
MaeII	ACGT	1 cut(s)	148
MaeIII	GTNAC	3 cut(s)	406, 859, 947
MalI	GATC	2 cut(s)	50, 793
MboI	GATC	2 cut(s)	48, 791
MboII	GAAGA	4 cut(s)	213, 299, 722, 953
MflI	RGATCY	1 cut(s)	791
MlsI	TGGCCA	1 cut(s)	705
MluCI	AATT	7 cut(s)	209, 251, 266, 477, 500, 631, 803
MluNI	TGGCCA	1 cut(s)	705
MnlI	CCTC	6 cut(s)	94, 310, 619, 646, 703, 1021
Mox20I	TGGCCA	1 cut(s)	705
Mph1103I	ATGCAT	1 cut(s)	589
MroNI	GCCGGC	1 cut(s)	373
MscI	TGGCCA	1 cut(s)	705
MseI	TTAA	4 cut(s)	165, 575, 744, 912
MslI	CAYNNNNRTG	2 cut(s)	711, 956
Msp20I	TGGCCA	1 cut(s)	705
MspCI	CTTAAG	1 cut(s)	743
MspI	CCGG	2 cut(s)	374, 645
MspR9I	CCNGG	1 cut(s)	67
Mva1269I	GAATGC	1 cut(s)	963
MvaI	CCWGG	1 cut(s)	67
MwoI	GCNNNNNNNGC	4 cut(s)	455, 464, 686, 1007
NaeI	GCCGGC	1 cut(s)	375
NcoI	CCATGG	3 cut(s)	468, 610, 853
NdeII	GATC	2 cut(s)	48, 791
NgoMIV	GCCGGC	1 cut(s)	373
NlaIII	CATG	8 cut(s)	326, 472, 614, 663, 689, 857, 924, 1029
NlaIV	GGNNCC	2 cut(s)	439, 832
NsiI	ATGCAT	1 cut(s)	589
NspI	RCATGY	1 cut(s)	663
PcsI	WCGNNNNNNNCGW	2 cut(s)	145, 165
PctI	GAATGC	1 cut(s)	963
PdiI	GCCGGC	1 cut(s)	375
PfeI	GAWTC	3 cut(s)	183, 218, 262
PinAI	ACCGGT	1 cut(s)	644
PkrI	GCNGC	3 cut(s)	64, 466, 691
PpuMI	RGGWCCY	1 cut(s)	438
Psp5II	RGGWCCY	1 cut(s)	438
Psp6I	CCWGG	1 cut(s)	65
PspGI	CCWGG	1 cut(s)	65
PspN4I	GGNNCC	2 cut(s)	439, 832
PspPI	GGNCC	2 cut(s)	421, 438
PspPPI	RGGWCCY	1 cut(s)	438
PsuI	RGATCY	1 cut(s)	791
RsaI	GTAC	2 cut(s)	658, 928
RsaNI	GTAC	2 cut(s)	657, 927
RseI	CAYNNNNRTG	2 cut(s)	711, 956
SaqAI	TTAA	4 cut(s)	165, 575, 744, 912
SatI	GCNGC	3 cut(s)	63, 465, 690
Sau3AI	GATC	2 cut(s)	48, 791
Sau96I	GGNCC	2 cut(s)	421, 438
ScrFI	CCNGG	1 cut(s)	67
SfaNI	GCATC	4 cut(s)	220, 574, 772, 888
SgrAI	CRCCGGYG	1 cut(s)	644
SinI	GGWCC	2 cut(s)	421, 438
SmiMI	CAYNNNNRTG	2 cut(s)	711, 956
SmlI	CTYRAG	1 cut(s)	743
SmoI	CTYRAG	1 cut(s)	743
Sse9I	AATT	7 cut(s)	209, 251, 266, 477, 500, 631, 803
SspMI	CTAG	4 cut(s)	366, 527, 786, 848
StyD4I	CCNGG	1 cut(s)	65
StyI	CCWWGG	5 cut(s)	424, 468, 556, 610, 853
TaaI	ACNGT	2 cut(s)	536, 728
TaiI	ACGT	1 cut(s)	151
TaqI	TCGA	1 cut(s)	695
TasI	AATT	7 cut(s)	209, 251, 266, 477, 500, 631, 803
TfiI	GAWTC	3 cut(s)	183, 218, 262
Tru1I	TTAA	4 cut(s)	165, 575, 744, 912
Tru9I	TTAA	4 cut(s)	165, 575, 744, 912
TscAI	CASTG	1 cut(s)	733
TseI	GCWGC	3 cut(s)	62, 464, 689
TspDTI	ATGAA	4 cut(s)	300, 372, 586, 618
TspRI	CASTG	1 cut(s)	733
Vha464I	CTTAAG	1 cut(s)	743
VpaK11BI	GGWCC	2 cut(s)	421, 438
XapI	RAATTY	1 cut(s)	209
XceI	RCATGY	1 cut(s)	663
XcmI	CCANNNNNNNNNTGG	1 cut(s)	431
XspI	CTAG	4 cut(s)	366, 527, 786, 848
Zsp2I	ATGCAT	1 cut(s)	589

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.