Prupe.7G017400_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000268
Physical Location & Seq
Forward (+)
2558132 .. 2560897
2766 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G017400.1

Sequence Viewer

Length: 1992 bp
ATGATTTACAAGAAAAAAGAACGACATGAAATGGGGAAAGTGGCCAATGCAAAGTTGGACCATAAGGTACAAGAAGAGATTAGTAATAAGTGGAGGAAATTGAACACTGCAGAGAAGGCAACATATGGTTCTGCCTTAGAAGGTTCAAGCGGGCAAGTAAACGACTCAGTGAATGAGATGAGTTGGATAACTAGATGCAGCCCGGACCGATTCCATCGTACGGTGGAAAAATTGTCAGAGGAGAAGCGGTTAGCAATTAAGGCTATTGGGTTCGGTAATGTGTCATCTTTGTCGTGCACTCGTTTACACCGCCAATTATGCCATTTTTTGATTCAAAAGTTCAATCCTGATATGTCTTCTATAGAACTGCACGGCAATGTGATTAGAATAAGTGCCGATGAGTTTGGGCGTGTTATGGGTCTTAAGAACACCGGCGAGGATGTTCAACTCGACAGGCTGGTAGAAGATGAAAAGGTGAAACAATTAGTCAAGAGTTTCGGTGGAAATGGCAAAAGAGTATTAGTAAAGGGTTTAGCTGAACAATTGGAAAAGTGCGAAAATGCGAATGAGGACTTTAAAGTTCGATTTGTGATGTTTGCACTTGGCACTATACTTTGCCCCACATCTTCACCATCAGTGACCGGGAAATATTTAACTTTCTTGACGATCCCAAGGAAGATAGAGACCAAGAACTGGGCCGACCATGGATTCAACTTCTTATGTGAAGGTGTTAGGTCGTTCAAAGCGAAGAAAGTTGCATATGTAAATGGGTCATTGCTTTTTCTGCAACTATTGTATTTCGATTCAATTTTCCATGGTGGAGTATATGTTGATAAGTCTTTGGATCCCATTATGTCTTGGGACAATAACTCAGTGTGGAAAATGATTAGATGGGTTATCAAGCAAGGTGGGTTTGATAGTCCTACCGTGCGGGTTGTTTCACAGCACCGTCGAACAAATGAAGTGTCTGGAGTAAATGTTGAAAGAATAGTTCAACAAGTTTCTATCAATTTGGCTCCAGTAATACAGGCAGAGGTGAAGCGATCAATTGAAGGACTTGCTTTGGGCCAGATAATACAGGCAGAGGTCCAGCGCTCAGTGTTGGAACTCACTAACAAGGTAATGAGTGAAGTGAGGTCCTTTATGAAAGACGCAAGACATGAAGATGTGAATCAAACTAAGGAGGACGGGCCACCGAAAATACGAGATGAAGGTGGTGAGAATGCTGTGAAGAAGAAGTTGAAATTTGGCGTGGAAAAGAGGAAGTTCACAAAATTGGCCCGTGGTGATCAAAGTCGAACTCAAACACGTCGAACGGCTGAAAGGCGTCCAGGGCTTCATTGTAGAGAGCCATGGGTTGACCCGTCAAATGCAAAAGGAAAGGCTGTGCAAAAGACGGCGTCTAAGATTAAAATTGGGCCTTTCAAATTAAAACCCGAGGACTTACAAGACTCCGATTTTGAATTATTCAGTTATATTTTTAGGTCTAACAACTTCTCAAGTGAGGAAGTTATAATTGAAATAGAAAACGAACATCATGTCACGAGAGATGAGTTCATGTGCCTGAGGCCCGAAATGTGGATTAATGATAGAGTACTGAACGCGCAAGTCTATTATCTACAAGAAAAGGGGTCAGGGAATTGGTACTTCCACACATATATGTCGATTTTCATTCCCGTTTTGGATCGAATTGGGAGTCATTGGTATTTGCTAGTGGTGCTTATGGGTGATAAAAAGGTTGAACTATGGGATAGTCTCCCCGGTGCTAAATACAACGCATCTCGTTATCAATTAGCGGAACGAATTATGAAAGTGTTGGACTACATTTATAAAGATGAGATTGTCAAACAATTTGACAAAGGATGGCAGTTTGCAAAATTCAACATTGTGCGAACTGACAAGGCCCGCAGACAACTAAATGGATGCGATTGTGGTATCTTCGTCATGAATTGGCTAGAAGATATAGAATGCACATCACACGGTTCCAATAAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

664

Amino Acids

76.3

Weight (kDa)

9.19

Isoelectric Point (pI)

42.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000268)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23642 FvH4_2g09911 FvH4_2g09911 FvH4_2g09911 FvH4_3g18421 FvH4_4g05321 FvH4_6g28332 FvH4_7g31231
prunus_persica Prupe.2G063700_v2.0.a1 Prupe.5G238300_v2.0.a1 Prupe.6G153700_v2.0.a1 Prupe.7G017400_v2.0.a1 Prupe.7G070100_v2.0.a1 Prupe.7G070100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0345471 RchiOBHm_Chr1g0366901 RchiOBHm_Chr2g0162601 RchiOBHm_Chr6g0266661 RchiOBHm_Chr6g0266671
rosa_laevigata RLG00000005047 RLG00000007971 RLG00000008530 RLG00000009009 RLG00000009046 RLG00000014086 RLG00000017162 RLG00000017163 RLG00000017440 RLG00000019098 RLG00000022623 RLG00000024566 RLG00000027733 RLG00000029878 RLG00000029945 RLG00000030127 RLG00000030157 RLG00000031078 RLG00000031080 RLG00000034338 RLG00000034670
rosa_multiflora Rmu_sc0002106.1_g000007 Rmu_sc0002531.1_g000064 Rmu_sc0003433.1_g000005 Rmu_sc0004704.1_g000001 Rmu_sc0004704.1_g000002 Rmu_sc0004888.1_g000042 Rmu_sc0005599.1_g000031 Rmu_sc0006413.1_g000014 Rmu_sc0006413.1_g000018
rosa_roxburghii Rroxscaffold_1G00031940 Rroxscaffold_1G00032500 Rroxscaffold_1G00074770 Rroxscaffold_1G00074780 Rroxscaffold_1G00075150 Rroxscaffold_2G00125060 Rroxscaffold_2G00125070 Rroxscaffold_2G00125800 Rroxscaffold_2G00125820 Rroxscaffold_2G00139560 Rroxscaffold_2G00140550 Rroxscaffold_4G00314090 Rroxscaffold_6G00390050 Rroxscaffold_6G00390520 Rroxscaffold_6G00390530 Rroxscaffold_6G00428030 Rroxscaffold_7G00201570 Rroxscaffold_7G00201580 Rroxscaffold_7G00207070 Rroxscaffold_7G00207080 Rroxscaffold_7G00207240
rosa_rugosa Rorug01G0408000 Rorug01G0408100 Rorug01G0408100 Rorug01G0408200 Rorug02G0155200 Rorug02G0181500 Rorug02G0288400 Rorug03G0208600 Rorug03G0272300 Rorug06G0005500 Rorug06G0005600 Rorug06G0026300.1 Rorug06G0026400 Rorug06G0026500 Rorug06G0026600 Rorug06G0026600 Rorug06G0026600 Rorug06G0145800 Rorug07G0305200
rosa_samantha Rh1AG062100 Rh1BG131900 Rh1BG157000 Rh1CG021100 Rh1CG321600 Rh1DG188200 Rh2DG388300 Rh3AG320500 Rh3BG355400 Rh3CG352400 Rh3CG353200 Rh4AG045800 Rh4DG171700 Rh5AG196000 Rh5AG196100 Rh5CG346800 Rh6BG147600 Rh6BG147700 Rh6CG143200 Rh6CG143500 Rh6CG174600 Rh6CG391800 Rh6DG132100 Rh6DG132300 Rh6DG167100 Rh6DG167200 Rh7AG211600 Rh7BG307000 Rh7BG307300 Rh7BG398300
rosa_wichuraiana Rw0G001830 Rw0G001840 Rw0G018160 Rw0G018170 Rw3G028040 Rw5G017860 Rw5G026710 Rw6G012630 Rw6G012650 Rw6G012780 Rw6G012800 Rw7G019130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1514, 1830
AccB7I CCANNNNNTGG 1 cut(s) 693
AccII CGCG 1 cut(s) 1604
AciI CCGC 6 cut(s) 150, 247, 310, 931, 1796, 1906
AclWI GGATC 4 cut(s) 661, 839, 852, 1692
AcoI YGGCCR 1 cut(s) 42
AcsI RAATTY 2 cut(s) 1244, 1877
AcyI GRCGYC 2 cut(s) 1327, 1400
AfaI GTAC 4 cut(s) 69, 220, 1596, 1646
AfeI AGCGCT 1 cut(s) 1094
AfiI CCNNNNNNNGG 3 cut(s) 220, 693, 1578
AflII CTTAAG 1 cut(s) 422
AflIII ACRYGT 1 cut(s) 1307
AjiI CACGTC 1 cut(s) 1310
AjnI CCWGG 1 cut(s) 1330
AluBI AGCT 1 cut(s) 536
AluI AGCT 1 cut(s) 536
Alw21I GWGCWC 1 cut(s) 299
Alw26I GTCTC 2 cut(s) 677, 1760
Alw44I GTGCAC 1 cut(s) 295
AlwI GGATC 4 cut(s) 661, 839, 852, 1692
Ama87I CYCGRG 1 cut(s) 1436
Aor51HI AGCGCT 1 cut(s) 1094
AoxI GGCC 8 cut(s) 42, 696, 1066, 1190, 1278, 1418, 1568, 1902
ApaLI GTGCAC 1 cut(s) 295
ApeKI GCWGC 1 cut(s) 198
ApoI RAATTY 2 cut(s) 1244, 1877
ArsI GACNNNNNNTTYG 8 cut(s) 950, 982, 1442, 1474, 1524, 1556, 1681, 1713
AseI ATTAAT 1 cut(s) 1584
AspLEI GCGC 2 cut(s) 1095, 1606
AsuC2I CCSGG 3 cut(s) 203, 643, 1761
AsuHPI GGTGA 6 cut(s) 487, 621, 1048, 1229, 1298, 1739
AvaI CYCGRG 1 cut(s) 1436
AvaII GGWCC 4 cut(s) 58, 205, 1087, 1137
AxyI CCTNAGG 1 cut(s) 1565
BaeGI GKGCMC 1 cut(s) 299
BalI TGGCCA 1 cut(s) 44
BamHI GGATCC 1 cut(s) 844
BauI CACGAG 1 cut(s) 1543
BbsI GAAGAC 1 cut(s) 348
Bbv12I GWGCWC 1 cut(s) 299
BbvI GCAGC 1 cut(s) 210
BccI CCATC 4 cut(s) 222, 640, 885, 1857
BceAI ACGGC 3 cut(s) 388, 1332, 1413
BciT130I CCWGG 1 cut(s) 1332
BclI TGATCA 1 cut(s) 1288
BcnI CCSGG 3 cut(s) 203, 643, 1761
BcoDI GTCTC 2 cut(s) 677, 1760
BfaI CTAG 3 cut(s) 192, 1712, 1955
BfmI CTRYAG 2 cut(s) 108, 360
BfoI RGCGCY 1 cut(s) 1096
BfrI CTTAAG 1 cut(s) 422
BisI GCNGC 1 cut(s) 199
BlsI GCNGC 1 cut(s) 200
BmcAI AGTACT 1 cut(s) 1596
Bme1390I CCNGG 4 cut(s) 203, 643, 1332, 1761
Bme18I GGWCC 4 cut(s) 58, 205, 1087, 1137
BmeT110I CYCGRG 1 cut(s) 1436
BmgBI CACGTC 1 cut(s) 1310
BmiI GGNNCC 3 cut(s) 846, 1017, 1984
BmrFI CCNGG 4 cut(s) 203, 643, 1332, 1761
BmrI ACTGGG 1 cut(s) 703
BmsI GCATC 3 cut(s) 185, 1787, 1913
BmuI ACTGGG 1 cut(s) 703
BpiI GAAGAC 1 cut(s) 348
BpmI CTGGAG 2 cut(s) 990, 1002
BpuEI CTTGAG 1 cut(s) 1483
BpuMI CCSGG 3 cut(s) 203, 643, 1761
BsaBI GATNNNNATC 1 cut(s) 1170
BsaHI GRCGYC 2 cut(s) 1327, 1400
BsaI GGTCTC 1 cut(s) 677
BsaJI CCNNGG 8 cut(s) 671, 703, 814, 1282, 1331, 1352, 1437, 1759
BsaXI ACNNNNNCTCC 6 cut(s) 233, 263, 813, 843, 963, 993
Bsc4I CCNNNNNNNGG 3 cut(s) 220, 693, 1578
Bse118I RCCGGY 1 cut(s) 431
Bse1I ACTGG 2 cut(s) 698, 1019
Bse21I CCTNAGG 1 cut(s) 1565
Bse3DI GCAATG 2 cut(s) 382, 773
Bse8I GATNNNNATC 1 cut(s) 1170
BseBI CCWGG 1 cut(s) 1332
BseDI CCNNGG 8 cut(s) 671, 703, 814, 1282, 1331, 1352, 1437, 1759
BseGI GGATG 3 cut(s) 445, 1868, 1928
BseJI GATNNNNATC 1 cut(s) 1170
BseLI CCNNNNNNNGG 3 cut(s) 220, 693, 1578
BseMI GCAATG 2 cut(s) 382, 773
BseMII CTCAG 4 cut(s) 180, 885, 1110, 1556
BseNI ACTGG 2 cut(s) 698, 1019
BseRI GAGGAG 1 cut(s) 254
BseSI GKGCMC 1 cut(s) 299
BseXI GCAGC 1 cut(s) 210
BsgI GTGCAG 1 cut(s) 353
Bsh1236I CGCG 1 cut(s) 1604
BshFI GGCC 8 cut(s) 44, 698, 1068, 1192, 1280, 1420, 1570, 1904
BsiHKAI GWGCWC 1 cut(s) 299
BsiHKCI CYCGRG 1 cut(s) 1436
BsiSI CCGG 4 cut(s) 203, 432, 642, 1761
BsiWI CGTACG 1 cut(s) 218
BslFI GGGAC 1 cut(s) 875
BslI CCNNNNNNNGG 3 cut(s) 220, 693, 1578
BsmAI GTCTC 2 cut(s) 677, 1760
BsmFI GGGAC 1 cut(s) 875
BsmI GAATGC 2 cut(s) 1228, 1973
BsnI GGCC 8 cut(s) 44, 698, 1068, 1192, 1280, 1420, 1570, 1904
Bso31I GGTCTC 1 cut(s) 677
BsoBI CYCGRG 1 cut(s) 1436
Bsp1286I GDGCHC 1 cut(s) 299
Bsp143I GATC 5 cut(s) 666, 844, 1043, 1288, 1684
Bsp19I CCATGG 3 cut(s) 703, 814, 1352
BspACI CCGC 6 cut(s) 150, 247, 310, 931, 1796, 1906
BspANI GGCC 8 cut(s) 44, 698, 1068, 1192, 1280, 1420, 1570, 1904
BspCNI CTCAG 4 cut(s) 179, 884, 1109, 1557
BspFNI CGCG 1 cut(s) 1604
BspHI TCATGA 1 cut(s) 1944
BspLI GGNNCC 3 cut(s) 846, 1017, 1984
BspMAI CTGCAG 1 cut(s) 112
BspPI GGATC 4 cut(s) 661, 839, 852, 1692
BspTI CTTAAG 1 cut(s) 422
BspTNI GGTCTC 1 cut(s) 677
BsrDI GCAATG 2 cut(s) 382, 773
BsrFI RCCGGY 1 cut(s) 431
BsrI ACTGG 2 cut(s) 698, 1019
BssAI RCCGGY 1 cut(s) 431
BssECI CCNNGG 8 cut(s) 671, 703, 814, 1282, 1331, 1352, 1437, 1759
BssMI GATC 5 cut(s) 666, 844, 1043, 1288, 1684
BssNI GRCGYC 2 cut(s) 1327, 1400
BssSI CACGAG 1 cut(s) 1543
BssT1I CCWWGG 4 cut(s) 671, 703, 814, 1352
Bst2BI CACGAG 1 cut(s) 1543
Bst2UI CCWGG 1 cut(s) 1332
Bst4CI ACNGT 4 cut(s) 223, 928, 950, 1982
Bst6I CTCTTC 1 cut(s) 69
BstACI GRCGYC 2 cut(s) 1327, 1400
BstAFI CTTAAG 1 cut(s) 422
BstC8I GCNNGC 2 cut(s) 152, 1906
BstDEI CTNAG 7 cut(s) 136, 166, 871, 1096, 1179, 1404, 1565
BstDSI CCRYGG 4 cut(s) 703, 814, 1282, 1352
BstF5I GGATG 3 cut(s) 445, 1868, 1928
BstFNI CGCG 1 cut(s) 1604
BstH2I RGCGCY 1 cut(s) 1096
BstHHI GCGC 2 cut(s) 1095, 1606
BstKTI GATC 5 cut(s) 669, 847, 1046, 1291, 1687
BstMAI GTCTC 2 cut(s) 677, 1760
BstMBI GATC 5 cut(s) 666, 844, 1043, 1288, 1684
BstMWI GCNNNNNNNGC 6 cut(s) 116, 260, 318, 784, 1333, 1717
BstNI CCWGG 1 cut(s) 1332
BstSCI CCNGG 4 cut(s) 201, 641, 1330, 1759
BstSFI CTRYAG 2 cut(s) 108, 360
BstSLI GKGCMC 1 cut(s) 299
BstUI CGCG 1 cut(s) 1604
BstV1I GCAGC 1 cut(s) 210
BstV2I GAAGAC 1 cut(s) 348
BstX2I RGATCY 1 cut(s) 844
BstYI RGATCY 1 cut(s) 844
Bsu36I CCTNAGG 1 cut(s) 1565
BsuRI GGCC 8 cut(s) 44, 698, 1068, 1192, 1280, 1420, 1570, 1904
BtgI CCRYGG 4 cut(s) 703, 814, 1282, 1352
BtrI CACGTC 1 cut(s) 1310
BtsCI GGATG 3 cut(s) 445, 1868, 1928
BtsI GCAGTG 1 cut(s) 105
BtsIMutI CAGTG 5 cut(s) 105, 174, 642, 879, 1104
Cac8I GCNNGC 2 cut(s) 152, 1906
CciI TCATGA 1 cut(s) 1944
CfoI GCGC 2 cut(s) 1095, 1606
Cfr10I RCCGGY 1 cut(s) 431
CpoI CGGWCCG 1 cut(s) 205
CseI GACGC 3 cut(s) 1160, 1316, 1389
Csp6I GTAC 4 cut(s) 68, 219, 1595, 1645
CspCI CAANNNNNGTGG 2 cut(s) 889, 924
CspI CGGWCCG 1 cut(s) 205
CviAII CATG 8 cut(s) 26, 704, 815, 1160, 1353, 1538, 1558, 1945
CviQI GTAC 4 cut(s) 68, 219, 1595, 1645
DdeI CTNAG 7 cut(s) 136, 166, 871, 1096, 1179, 1404, 1565
DpnI GATC 5 cut(s) 668, 846, 1045, 1290, 1686
DpnII GATC 5 cut(s) 666, 844, 1043, 1288, 1684
DraI TTTAAA 1 cut(s) 577
EaeI YGGCCR 1 cut(s) 42
Eam1104I CTCTTC 1 cut(s) 69
EarI CTCTTC 1 cut(s) 69
Eco130I CCWWGG 4 cut(s) 671, 703, 814, 1352
Eco31I GGTCTC 1 cut(s) 677
Eco47I GGWCC 4 cut(s) 58, 205, 1087, 1137
Eco47III AGCGCT 1 cut(s) 1094
Eco81I CCTNAGG 1 cut(s) 1565
Eco88I CYCGRG 1 cut(s) 1436
EcoO109I RGGNCCY 1 cut(s) 1137
EcoRII CCWGG 1 cut(s) 1330
EcoT14I CCWWGG 4 cut(s) 671, 703, 814, 1352
ErhI CCWWGG 4 cut(s) 671, 703, 814, 1352
FaeI CATG 8 cut(s) 29, 707, 818, 1163, 1356, 1541, 1561, 1948
FaqI GGGAC 1 cut(s) 875
FatI CATG 8 cut(s) 25, 703, 814, 1159, 1352, 1537, 1557, 1944
FauI CCCGC 3 cut(s) 143, 924, 1913
FauNDI CATATG 2 cut(s) 124, 760
FbaI TGATCA 1 cut(s) 1288
Fnu4HI GCNGC 1 cut(s) 199
FokI GGATG 3 cut(s) 452, 1875, 1935
Fsp4HI GCNGC 1 cut(s) 199
FspBI CTAG 3 cut(s) 192, 1712, 1955
GlaI GCGC 2 cut(s) 1094, 1605
GluI GCNGC 1 cut(s) 199
GsuI CTGGAG 2 cut(s) 990, 1002
HaeII RGCGCY 1 cut(s) 1096
HaeIII GGCC 8 cut(s) 44, 698, 1068, 1192, 1280, 1420, 1570, 1904
HapII CCGG 4 cut(s) 203, 432, 642, 1761
HgaI GACGC 3 cut(s) 1160, 1316, 1389
HhaI GCGC 2 cut(s) 1095, 1606
Hin1I GRCGYC 2 cut(s) 1327, 1400
Hin1II CATG 8 cut(s) 29, 707, 818, 1163, 1356, 1541, 1561, 1948
Hin6I GCGC 2 cut(s) 1093, 1604
HinP1I GCGC 2 cut(s) 1093, 1604
HincII GTYRAC 1 cut(s) 1360
HindII GTYRAC 1 cut(s) 1360
HinfI GANTC 8 cut(s) 164, 210, 331, 708, 803, 1171, 1451, 1696
HpaII CCGG 4 cut(s) 203, 432, 642, 1761
HphI GGTGA 6 cut(s) 487, 621, 1048, 1229, 1298, 1739
Hpy166II GTNNAC 5 cut(s) 160, 297, 305, 1269, 1360
Hpy188I TCNGA 2 cut(s) 238, 1456
Hpy188III TCNNGA 6 cut(s) 347, 490, 661, 969, 1543, 1945
Hpy8I GTNNAC 5 cut(s) 160, 297, 305, 1269, 1360
Hpy99I CGWCG 2 cut(s) 954, 1314
HpyAV CCTTC 5 cut(s) 109, 134, 719, 1046, 1205
HpyCH4III ACNGT 4 cut(s) 223, 928, 950, 1982
HpyCH4IV ACGT 1 cut(s) 1309
HpyF10VI GCNNNNNNNGC 6 cut(s) 116, 260, 318, 784, 1333, 1717
HpyF3I CTNAG 7 cut(s) 136, 166, 871, 1096, 1179, 1404, 1565
HpySE526I ACGT 1 cut(s) 1309
Hsp92I GRCGYC 2 cut(s) 1327, 1400
Hsp92II CATG 8 cut(s) 29, 707, 818, 1163, 1356, 1541, 1561, 1948
HspAI GCGC 2 cut(s) 1093, 1604
Ksp22I TGATCA 1 cut(s) 1288
Kzo9I GATC 5 cut(s) 666, 844, 1043, 1288, 1684
LmnI GCTCC 1 cut(s) 1021
Lsp1109I GCAGC 1 cut(s) 210
LweI GCATC 3 cut(s) 185, 1787, 1913
MaeI CTAG 3 cut(s) 192, 1712, 1955
MaeII ACGT 1 cut(s) 1309
MaeIII GTNAC 2 cut(s) 637, 1540
MalI GATC 5 cut(s) 668, 846, 1045, 1290, 1686
MboI GATC 5 cut(s) 666, 844, 1043, 1288, 1684
MfeI CAATTG 2 cut(s) 542, 1047
MflI RGATCY 1 cut(s) 844
MhlI GDGCHC 1 cut(s) 299
MlsI TGGCCA 1 cut(s) 44
MluNI TGGCCA 1 cut(s) 44
MlyI GAGTC 3 cut(s) 158, 1445, 1705
MmeI TCCRAC 4 cut(s) 36, 164, 1083, 1797
Mox20I TGGCCA 1 cut(s) 44
MscI TGGCCA 1 cut(s) 44
MseI TTAA 7 cut(s) 258, 423, 576, 653, 1410, 1430, 1584
MslI CAYNNNNRTG 3 cut(s) 375, 1164, 1658
Msp20I TGGCCA 1 cut(s) 44
MspCI CTTAAG 1 cut(s) 422
MspI CCGG 4 cut(s) 203, 432, 642, 1761
MspR9I CCNGG 4 cut(s) 203, 643, 1332, 1761
MunI CAATTG 2 cut(s) 542, 1047
Mva1269I GAATGC 2 cut(s) 1228, 1973
MvaI CCWGG 1 cut(s) 1332
MvnI CGCG 1 cut(s) 1604
MwoI GCNNNNNNNGC 6 cut(s) 116, 260, 318, 784, 1333, 1717
NciI CCSGG 3 cut(s) 203, 643, 1761
NcoI CCATGG 3 cut(s) 703, 814, 1352
NdeI CATATG 2 cut(s) 124, 760
NdeII GATC 5 cut(s) 666, 844, 1043, 1288, 1684
NlaIII CATG 8 cut(s) 29, 707, 818, 1163, 1356, 1541, 1561, 1948
NlaIV GGNNCC 3 cut(s) 846, 1017, 1984
NmuCI GTSAC 2 cut(s) 637, 1540
PagI TCATGA 1 cut(s) 1944
PcsI WCGNNNNNNNCGW 1 cut(s) 743
PctI GAATGC 2 cut(s) 1228, 1973
PfeI GAWTC 5 cut(s) 210, 331, 708, 803, 1171
Pfl23II CGTACG 1 cut(s) 218
PflFI GACNNNGTC 1 cut(s) 1399
PflMI CCANNNNNTGG 1 cut(s) 693
PkrI GCNGC 1 cut(s) 200
PleI GAGTC 3 cut(s) 158, 1445, 1704
PpsI GAGTC 3 cut(s) 158, 1445, 1704
PpuMI RGGWCCY 1 cut(s) 1137
PshBI ATTAAT 1 cut(s) 1584
PsiI TTATAA 2 cut(s) 1514, 1830
Psp5II RGGWCCY 1 cut(s) 1137
Psp6I CCWGG 1 cut(s) 1330
PspGI CCWGG 1 cut(s) 1330
PspLI CGTACG 1 cut(s) 218
PspN4I GGNNCC 3 cut(s) 846, 1017, 1984
PspPPI RGGWCCY 1 cut(s) 1137
PstI CTGCAG 1 cut(s) 112
PsuI RGATCY 1 cut(s) 844
PsyI GACNNNGTC 1 cut(s) 1399
RsaI GTAC 4 cut(s) 69, 220, 1596, 1646
RsaNI GTAC 4 cut(s) 68, 219, 1595, 1645
RseI CAYNNNNRTG 3 cut(s) 375, 1164, 1658
Rsr2I CGGWCCG 1 cut(s) 205
RsrII CGGWCCG 1 cut(s) 205
SaqAI TTAA 7 cut(s) 258, 423, 576, 653, 1410, 1430, 1584
SatI GCNGC 1 cut(s) 199
Sau3AI GATC 5 cut(s) 666, 844, 1043, 1288, 1684
ScaI AGTACT 1 cut(s) 1596
SchI GAGTC 3 cut(s) 158, 1445, 1705
ScrFI CCNGG 4 cut(s) 203, 643, 1332, 1761
SduI GDGCHC 1 cut(s) 299
SfaNI GCATC 3 cut(s) 185, 1787, 1913
SfcI CTRYAG 2 cut(s) 108, 360
SgrAI CRCCGGYG 1 cut(s) 431
SinI GGWCC 4 cut(s) 58, 205, 1087, 1137
SmiMI CAYNNNNRTG 3 cut(s) 375, 1164, 1658
SmlI CTYRAG 2 cut(s) 422, 1498
SmoI CTYRAG 2 cut(s) 422, 1498
SsiI CCGC 6 cut(s) 150, 247, 310, 931, 1796, 1906
SspI AATATT 1 cut(s) 650
SspMI CTAG 3 cut(s) 192, 1712, 1955
StyD4I CCNGG 4 cut(s) 201, 641, 1330, 1759
StyI CCWWGG 4 cut(s) 671, 703, 814, 1352
TaaI ACNGT 4 cut(s) 223, 928, 950, 1982
TaiI ACGT 1 cut(s) 1312
TaqI TCGA 8 cut(s) 450, 583, 801, 952, 1297, 1312, 1664, 1687
TaqII GACCGA 1 cut(s) 222
TatI WGTACW 1 cut(s) 1594
TfiI GAWTC 5 cut(s) 210, 331, 708, 803, 1171
Tru1I TTAA 7 cut(s) 258, 423, 576, 653, 1410, 1430, 1584
Tru9I TTAA 7 cut(s) 258, 423, 576, 653, 1410, 1430, 1584
TscAI CASTG 5 cut(s) 112, 174, 642, 879, 1104
TseFI GTSAC 2 cut(s) 637, 1540
TseI GCWGC 1 cut(s) 198
Tsp45I GTSAC 2 cut(s) 637, 1540
TspRI CASTG 5 cut(s) 112, 174, 642, 879, 1104
Tth111I GACNNNGTC 1 cut(s) 1399
Van91I CCANNNNNTGG 1 cut(s) 693
Vha464I CTTAAG 1 cut(s) 422
VneI GTGCAC 1 cut(s) 295
VpaK11BI GGWCC 4 cut(s) 58, 205, 1087, 1137
VspI ATTAAT 1 cut(s) 1584
XapI RAATTY 2 cut(s) 1244, 1877
XcmI CCANNNNNNNNNTGG 1 cut(s) 52
XspI CTAG 3 cut(s) 192, 1712, 1955
ZrmI AGTACT 1 cut(s) 1596
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.