Rorug06G0026500

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000268
Physical Location & Seq
Forward (+)
3214667 .. 3216017
1351 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0026500.1

Sequence Viewer

Length: 954 bp
ATGGATCAAATCAACAGGCCAACGATGGAGGAAGATAAAGTTCATGCTTTCTCTTCCCCCATGCCATTAATGTCAGAACATTGGAAGACTGAAGAGGGGAAGAAATCCAATCCCTCCACTTTGAGTGAGGTTTTGGGCTTGCGCGAGTTATTTTCTCCACAGGTGTGGAGAGCATCTCTAGCTGAGCTGGTTGGCACGGCAGCGCTTGTTTTTGCTATAGACGCAATTGTGATCTCCTCCATTGAGACCAATATCTCAGCACCAAACCTTGTATTGTCAATCCTGGTAGCAATCATCGCGGCGATTCTCCTAATTGCTACCAACCCGGTTTCCGGAGGCCACATCAACCCCGTCATCACCTTTTCCGCGGCACTGGTCGGCATCATTTCCTTCTCACGAGCTGCCGTGTACATTTTCATGCAATGCGTCGGAAGAGTTCTAGGTGCCTTGGCACTCAAGGCTGTGGTTAACAGCAGCCTTGAAGAAACATTCTCGCTTGGAGGTTGCATCCTAACCGTGGTTACCCCGGGCCCACAAGGGCCCATCACGGTCGGGATCGGGACAGGCCAGGCCCTTTGGCTCGAGATAATATGCACATTTATTTTCCTCTTTGCTTCGATATGGATGGCGTTCGACCACCGCCAAGCCCACGCCATGGGTAAGGTTATGGTCCTCTCTATCGTCGGAATAGTGGTGGGCATTCTTGTGTTTATCTCGACCTCTGTAACAACAGTGAAGGGCTACGCTGGGGTTGGAATGAACCCAGCTAGATGCCTCGGCCCAGCAATTGTTCGTGGGGGCCACCTCTGGACCGGCCACTGGGTATTTTGGGTCGGGCCTACGATTTCTTGCTTCGCTTTCTACGTGTACGTCAAGCTCATTCCCCGTCAACATTTCCACGTGGAGGGCTACAAGCACGATATCTTCAACTATGTGAAGACTCTTCCCAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

317

Amino Acids

34.22

Weight (kDa)

8.27

Isoelectric Point (pI)

34.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MIP PF00230 51 - 283 5.6e-37 Major intrinsic protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000268)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23642 FvH4_2g09911 FvH4_2g09911 FvH4_2g09911 FvH4_3g18421 FvH4_4g05321 FvH4_6g28332 FvH4_7g31231
prunus_persica Prupe.2G063700_v2.0.a1 Prupe.5G238300_v2.0.a1 Prupe.6G153700_v2.0.a1 Prupe.7G017400_v2.0.a1 Prupe.7G070100_v2.0.a1 Prupe.7G070100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0345471 RchiOBHm_Chr1g0366901 RchiOBHm_Chr2g0162601 RchiOBHm_Chr6g0266661 RchiOBHm_Chr6g0266671
rosa_laevigata RLG00000005047 RLG00000007971 RLG00000008530 RLG00000009009 RLG00000009046 RLG00000014086 RLG00000017162 RLG00000017163 RLG00000017440 RLG00000019098 RLG00000022623 RLG00000024566 RLG00000027733 RLG00000029878 RLG00000029945 RLG00000030127 RLG00000030157 RLG00000031078 RLG00000031080 RLG00000034338 RLG00000034670
rosa_multiflora Rmu_sc0002106.1_g000007 Rmu_sc0002531.1_g000064 Rmu_sc0003433.1_g000005 Rmu_sc0004704.1_g000001 Rmu_sc0004704.1_g000002 Rmu_sc0004888.1_g000042 Rmu_sc0005599.1_g000031 Rmu_sc0006413.1_g000014 Rmu_sc0006413.1_g000018
rosa_roxburghii Rroxscaffold_1G00031940 Rroxscaffold_1G00032500 Rroxscaffold_1G00074770 Rroxscaffold_1G00074780 Rroxscaffold_1G00075150 Rroxscaffold_2G00125060 Rroxscaffold_2G00125070 Rroxscaffold_2G00125800 Rroxscaffold_2G00125820 Rroxscaffold_2G00139560 Rroxscaffold_2G00140550 Rroxscaffold_4G00314090 Rroxscaffold_6G00390050 Rroxscaffold_6G00390520 Rroxscaffold_6G00390530 Rroxscaffold_6G00428030 Rroxscaffold_7G00201570 Rroxscaffold_7G00201580 Rroxscaffold_7G00207070 Rroxscaffold_7G00207080 Rroxscaffold_7G00207240
rosa_rugosa Rorug01G0408000 Rorug01G0408100 Rorug01G0408100 Rorug01G0408200 Rorug02G0155200 Rorug02G0181500 Rorug02G0288400 Rorug03G0208600 Rorug03G0272300 Rorug06G0005500 Rorug06G0005600 Rorug06G0026300.1 Rorug06G0026400 Rorug06G0026500 Rorug06G0026600 Rorug06G0026600 Rorug06G0026600 Rorug06G0145800 Rorug07G0305200
rosa_samantha Rh1AG062100 Rh1BG131900 Rh1BG157000 Rh1CG021100 Rh1CG321600 Rh1DG188200 Rh2DG388300 Rh3AG320500 Rh3BG355400 Rh3CG352400 Rh3CG353200 Rh4AG045800 Rh4DG171700 Rh5AG196000 Rh5AG196100 Rh5CG346800 Rh6BG147600 Rh6BG147700 Rh6CG143200 Rh6CG143500 Rh6CG174600 Rh6CG391800 Rh6DG132100 Rh6DG132300 Rh6DG167100 Rh6DG167200 Rh7AG211600 Rh7BG307000 Rh7BG307300 Rh7BG398300
rosa_wichuraiana Rw0G001830 Rw0G001840 Rw0G018160 Rw0G018170 Rw3G028040 Rw5G017860 Rw5G026710 Rw6G012630 Rw6G012650 Rw6G012780 Rw6G012800 Rw7G019130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 443
AccB7I CCANNNNNTGG 1 cut(s) 655
AccII CGCG 3 cut(s) 144, 299, 368
AccIII TCCGGA 1 cut(s) 332
AciI CCGC 4 cut(s) 299, 366, 368, 640
AclWI GGATC 2 cut(s) 12, 563
AcoI YGGCCR 1 cut(s) 814
AcuI CTGAAG 1 cut(s) 111
AcvI CACGTG 1 cut(s) 901
AfaI GTAC 2 cut(s) 410, 869
AfeI AGCGCT 1 cut(s) 204
AfiI CCNNNNNNNGG 5 cut(s) 332, 517, 655, 819, 904
AflIII ACRYGT 1 cut(s) 864
AgsI TTSAA 2 cut(s) 482, 928
AjnI CCWGG 2 cut(s) 282, 567
AleI CACNNNNGTG 1 cut(s) 163
AluBI AGCT 5 cut(s) 182, 187, 401, 767, 877
AluI AGCT 5 cut(s) 182, 187, 401, 767, 877
Alw26I GTCTC 1 cut(s) 239
AlwI GGATC 2 cut(s) 12, 563
Ama87I CYCGRG 2 cut(s) 526, 581
Aor13HI TCCGGA 1 cut(s) 332
Aor51HI AGCGCT 1 cut(s) 204
ApaI GGGCCC 2 cut(s) 533, 543
ApeKI GCWGC 3 cut(s) 200, 401, 474
AseI ATTAAT 1 cut(s) 68
AspLEI GCGC 2 cut(s) 144, 205
AsuC2I CCSGG 3 cut(s) 326, 527, 528
AsuHPI GGTGA 1 cut(s) 349
AvaI CYCGRG 2 cut(s) 526, 581
AvaII GGWCC 2 cut(s) 670, 810
BaeGI GKGCMC 2 cut(s) 533, 543
BanI GGYRCC 1 cut(s) 443
BanII GRGCYC 2 cut(s) 533, 543
BauI CACGAG 1 cut(s) 396
BbrPI CACGTG 1 cut(s) 901
BbsI GAAGAC 2 cut(s) 92, 944
BbvI GCAGC 3 cut(s) 212, 388, 486
BccI CCATC 3 cut(s) 19, 551, 619
BceAI ACGGC 2 cut(s) 213, 389
BciT130I CCWGG 2 cut(s) 284, 569
BcnI CCSGG 3 cut(s) 326, 527, 528
BcoDI GTCTC 1 cut(s) 239
BfaI CTAG 3 cut(s) 179, 440, 768
BfmI CTRYAG 1 cut(s) 216
BfoI RGCGCY 1 cut(s) 206
BisI GCNGC 5 cut(s) 201, 300, 369, 402, 475
BlpI GCTNAGC 1 cut(s) 183
BlsI GCNGC 5 cut(s) 202, 301, 370, 403, 476
Bme1390I CCNGG 5 cut(s) 284, 326, 527, 528, 569
Bme18I GGWCC 2 cut(s) 670, 810
BmeT110I CYCGRG 2 cut(s) 526, 581
BmiI GGNNCC 4 cut(s) 445, 531, 541, 800
BmrFI CCNGG 5 cut(s) 284, 326, 527, 528, 569
BmrI ACTGGG 1 cut(s) 829
BmsI GCATC 4 cut(s) 182, 390, 516, 761
BmuI ACTGGG 1 cut(s) 829
BpiI GAAGAC 2 cut(s) 92, 944
BplI GAGNNNNNCTC 2 cut(s) 160, 192
Bpu1102I GCTNAGC 1 cut(s) 183
BpuEI CTTGAG 1 cut(s) 440
BpuMI CCSGG 3 cut(s) 326, 527, 528
BsaAI YACGTR 2 cut(s) 865, 901
BsaI GGTCTC 1 cut(s) 239
BsaJI CCNNGG 7 cut(s) 366, 447, 516, 525, 526, 654, 775
BsaWI WCCGGW 1 cut(s) 332
Bsc4I CCNNNNNNNGG 5 cut(s) 332, 517, 655, 819, 904
Bse118I RCCGGY 1 cut(s) 812
Bse1I ACTGG 2 cut(s) 378, 824
Bse3DI GCAATG 1 cut(s) 428
BseAI TCCGGA 1 cut(s) 332
BseBI CCWGG 2 cut(s) 284, 569
BseDI CCNNGG 7 cut(s) 366, 447, 516, 525, 526, 654, 775
BseGI GGATG 2 cut(s) 507, 630
BseLI CCNNNNNNNGG 5 cut(s) 332, 517, 655, 819, 904
BseMI GCAATG 1 cut(s) 428
BseMII CTCAG 2 cut(s) 174, 270
BseNI ACTGG 2 cut(s) 378, 824
BseRI GAGGAG 1 cut(s) 226
BseSI GKGCMC 2 cut(s) 533, 543
BseXI GCAGC 3 cut(s) 212, 388, 486
BseYI CCCAGC 3 cut(s) 746, 763, 781
Bsh1236I CGCG 3 cut(s) 144, 299, 368
Bsh1285I CGRYCG 1 cut(s) 552
BshNI GGYRCC 1 cut(s) 443
BsiEI CGRYCG 1 cut(s) 552
BsiHKCI CYCGRG 2 cut(s) 526, 581
BsiSI CCGG 4 cut(s) 326, 333, 527, 813
BslFI GGGAC 1 cut(s) 574
BslI CCNNNNNNNGG 5 cut(s) 332, 517, 655, 819, 904
BsmAI GTCTC 1 cut(s) 239
BsmFI GGGAC 1 cut(s) 574
BsmI GAATGC 1 cut(s) 699
Bso31I GGTCTC 1 cut(s) 239
BsoBI CYCGRG 2 cut(s) 526, 581
Bsp120I GGGCCC 2 cut(s) 529, 539
Bsp1286I GDGCHC 2 cut(s) 533, 543
Bsp13I TCCGGA 1 cut(s) 332
Bsp1407I TGTACA 1 cut(s) 408
Bsp143I GATC 3 cut(s) 4, 231, 555
Bsp1720I GCTNAGC 1 cut(s) 183
Bsp19I CCATGG 1 cut(s) 654
BspACI CCGC 4 cut(s) 299, 366, 368, 640
BspCNI CTCAG 2 cut(s) 175, 269
BspEI TCCGGA 1 cut(s) 332
BspFNI CGCG 3 cut(s) 144, 299, 368
BspLI GGNNCC 4 cut(s) 445, 531, 541, 800
BspPI GGATC 2 cut(s) 12, 563
BspT107I GGYRCC 1 cut(s) 443
BspTNI GGTCTC 1 cut(s) 239
BsrDI GCAATG 1 cut(s) 428
BsrFI RCCGGY 1 cut(s) 812
BsrGI TGTACA 1 cut(s) 408
BsrI ACTGG 2 cut(s) 378, 824
BssAI RCCGGY 1 cut(s) 812
BssECI CCNNGG 7 cut(s) 366, 447, 516, 525, 526, 654, 775
BssMI GATC 3 cut(s) 4, 231, 555
BssSI CACGAG 1 cut(s) 396
BssT1I CCWWGG 2 cut(s) 447, 654
Bst2BI CACGAG 1 cut(s) 396
Bst2UI CCWGG 2 cut(s) 284, 569
Bst4CI ACNGT 3 cut(s) 517, 550, 733
Bst6I CTCTTC 4 cut(s) 58, 87, 427, 948
BstAUI TGTACA 1 cut(s) 408
BstBAI YACGTR 2 cut(s) 865, 901
BstC8I GCNNGC 1 cut(s) 140
BstDEI CTNAG 2 cut(s) 183, 256
BstDSI CCRYGG 3 cut(s) 366, 516, 654
BstEII GGTNACC 1 cut(s) 520
BstF5I GGATG 2 cut(s) 507, 630
BstFNI CGCG 3 cut(s) 144, 299, 368
BstH2I RGCGCY 1 cut(s) 206
BstHHI GCGC 2 cut(s) 144, 205
BstKTI GATC 3 cut(s) 7, 234, 558
BstMAI GTCTC 1 cut(s) 239
BstMBI GATC 3 cut(s) 4, 231, 555
BstMCI CGRYCG 1 cut(s) 552
BstMWI GCNNNNNNNGC 4 cut(s) 179, 221, 296, 458
BstNI CCWGG 2 cut(s) 284, 569
BstPI GGTNACC 1 cut(s) 520
BstSCI CCNGG 5 cut(s) 282, 324, 525, 526, 567
BstSFI CTRYAG 1 cut(s) 216
BstSLI GKGCMC 2 cut(s) 533, 543
BstUI CGCG 3 cut(s) 144, 299, 368
BstV1I GCAGC 3 cut(s) 212, 388, 486
BstV2I GAAGAC 2 cut(s) 92, 944
BstXI CCANNNNNNTGG 1 cut(s) 165
BtgI CCRYGG 3 cut(s) 366, 516, 654
BtgZI GCGATG 1 cut(s) 280
BtsCI GGATG 2 cut(s) 507, 630
BtsIMutI CAGTG 3 cut(s) 371, 738, 817
Cac8I GCNNGC 1 cut(s) 140
CfoI GCGC 2 cut(s) 144, 205
Cfr10I RCCGGY 1 cut(s) 812
Cfr42I CCGCGG 1 cut(s) 369
Cfr9I CCCGGG 1 cut(s) 526
CseI GACGC 2 cut(s) 230, 415
Csp6I GTAC 2 cut(s) 409, 868
CviAII CATG 4 cut(s) 44, 61, 418, 655
CviQI GTAC 2 cut(s) 409, 868
DdeI CTNAG 2 cut(s) 183, 256
DpnI GATC 3 cut(s) 6, 233, 557
DpnII GATC 3 cut(s) 4, 231, 555
EaeI YGGCCR 1 cut(s) 814
Eam1104I CTCTTC 4 cut(s) 58, 87, 427, 948
EarI CTCTTC 4 cut(s) 58, 87, 427, 948
Eco130I CCWWGG 2 cut(s) 447, 654
Eco24I GRGCYC 2 cut(s) 533, 543
Eco31I GGTCTC 1 cut(s) 239
Eco32I GATATC 1 cut(s) 922
Eco47I GGWCC 2 cut(s) 670, 810
Eco47III AGCGCT 1 cut(s) 204
Eco57I CTGAAG 1 cut(s) 111
Eco72I CACGTG 1 cut(s) 901
Eco88I CYCGRG 2 cut(s) 526, 581
Eco91I GGTNACC 1 cut(s) 520
EcoO109I RGGNCCY 2 cut(s) 539, 571
EcoO65I GGTNACC 1 cut(s) 520
EcoRII CCWGG 2 cut(s) 282, 567
EcoRV GATATC 1 cut(s) 922
EcoT14I CCWWGG 2 cut(s) 447, 654
EcoT38I GRGCYC 2 cut(s) 533, 543
ErhI CCWWGG 2 cut(s) 447, 654
FaeI CATG 4 cut(s) 47, 64, 421, 658
FaiI YATR 9 cut(s) 45, 62, 218, 419, 592, 622, 656, 668, 933
FaqI GGGAC 1 cut(s) 574
FatI CATG 4 cut(s) 43, 60, 417, 654
Fnu4HI GCNGC 5 cut(s) 201, 300, 369, 402, 475
FokI GGATG 2 cut(s) 494, 637
FriOI GRGCYC 2 cut(s) 533, 543
Fsp4HI GCNGC 5 cut(s) 201, 300, 369, 402, 475
FspBI CTAG 3 cut(s) 179, 440, 768
GlaI GCGC 2 cut(s) 143, 204
GluI GCNGC 5 cut(s) 201, 300, 369, 402, 475
GsaI CCCAGC 3 cut(s) 750, 767, 785
HaeII RGCGCY 1 cut(s) 206
HapII CCGG 4 cut(s) 326, 333, 527, 813
HgaI GACGC 2 cut(s) 230, 415
HhaI GCGC 2 cut(s) 144, 205
Hin1II CATG 4 cut(s) 47, 64, 421, 658
Hin6I GCGC 2 cut(s) 142, 203
HinP1I GCGC 2 cut(s) 142, 203
HincII GTYRAC 2 cut(s) 469, 890
HindII GTYRAC 2 cut(s) 469, 890
HinfI GANTC 2 cut(s) 304, 940
HpaI GTTAAC 1 cut(s) 469
HpaII CCGG 4 cut(s) 326, 333, 527, 813
HphI GGTGA 1 cut(s) 349
Hpy166II GTNNAC 4 cut(s) 409, 469, 868, 890
Hpy188I TCNGA 3 cut(s) 76, 431, 686
Hpy188III TCNNGA 7 cut(s) 333, 396, 553, 559, 583, 715, 808
Hpy8I GTNNAC 4 cut(s) 409, 469, 868, 890
Hpy99I CGWCG 2 cut(s) 431, 686
HpyAV CCTTC 2 cut(s) 400, 730
HpyCH4III ACNGT 3 cut(s) 517, 550, 733
HpyCH4IV ACGT 3 cut(s) 864, 870, 900
HpyCH4V TGCA 3 cut(s) 421, 507, 594
HpyF10VI GCNNNNNNNGC 4 cut(s) 179, 221, 296, 458
HpyF3I CTNAG 2 cut(s) 183, 256
HpySE526I ACGT 3 cut(s) 864, 870, 900
Hsp92II CATG 4 cut(s) 47, 64, 421, 658
HspAI GCGC 2 cut(s) 142, 203
Kpn2I TCCGGA 1 cut(s) 332
KspAI GTTAAC 1 cut(s) 469
KspI CCGCGG 1 cut(s) 369
Kzo9I GATC 3 cut(s) 4, 231, 555
Lsp1109I GCAGC 3 cut(s) 212, 388, 486
LweI GCATC 4 cut(s) 182, 390, 516, 761
MaeI CTAG 3 cut(s) 179, 440, 768
MaeII ACGT 3 cut(s) 864, 870, 900
MaeIII GTNAC 2 cut(s) 520, 724
MalI GATC 3 cut(s) 6, 233, 557
MboI GATC 3 cut(s) 4, 231, 555
MfeI CAATTG 2 cut(s) 225, 786
MhlI GDGCHC 2 cut(s) 533, 543
MluCI AATT 3 cut(s) 225, 312, 786
MlyI GAGTC 1 cut(s) 934
MmeI TCCRAC 3 cut(s) 409, 664, 733
MroI TCCGGA 1 cut(s) 332
MseI TTAA 2 cut(s) 68, 468
MslI CAYNNNNRTG 3 cut(s) 163, 416, 704
MspA1I CMGCKG 1 cut(s) 368
MspI CCGG 4 cut(s) 326, 333, 527, 813
MspR9I CCNGG 5 cut(s) 284, 326, 527, 528, 569
MunI CAATTG 2 cut(s) 225, 786
Mva1269I GAATGC 1 cut(s) 699
MvaI CCWGG 2 cut(s) 284, 569
MvnI CGCG 3 cut(s) 144, 299, 368
MwoI GCNNNNNNNGC 4 cut(s) 179, 221, 296, 458
NciI CCSGG 3 cut(s) 326, 527, 528
NcoI CCATGG 1 cut(s) 654
NdeII GATC 3 cut(s) 4, 231, 555
NlaIII CATG 4 cut(s) 47, 64, 421, 658
NlaIV GGNNCC 4 cut(s) 445, 531, 541, 800
NmeAIII GCCGAG 1 cut(s) 756
OliI CACNNNNGTG 1 cut(s) 163
PaeR7I CTCGAG 1 cut(s) 581
PcsI WCGNNNNNNNCGW 1 cut(s) 861
PctI GAATGC 1 cut(s) 699
PfeI GAWTC 1 cut(s) 304
PflMI CCANNNNNTGG 1 cut(s) 655
PkrI GCNGC 5 cut(s) 202, 301, 370, 403, 476
PleI GAGTC 1 cut(s) 934
PmaCI CACGTG 1 cut(s) 901
PmlI CACGTG 1 cut(s) 901
PpsI GAGTC 1 cut(s) 934
Ppu21I YACGTR 2 cut(s) 865, 901
PshBI ATTAAT 1 cut(s) 68
Psp6I CCWGG 2 cut(s) 282, 567
PspCI CACGTG 1 cut(s) 901
PspEI GGTNACC 1 cut(s) 520
PspFI CCCAGC 3 cut(s) 746, 763, 781
PspGI CCWGG 2 cut(s) 282, 567
PspN4I GGNNCC 4 cut(s) 445, 531, 541, 800
PspOMI GGGCCC 2 cut(s) 529, 539
RsaI GTAC 2 cut(s) 410, 869
RsaNI GTAC 2 cut(s) 409, 868
RseI CAYNNNNRTG 3 cut(s) 163, 416, 704
SacII CCGCGG 1 cut(s) 369
SaqAI TTAA 2 cut(s) 68, 468
SatI GCNGC 5 cut(s) 201, 300, 369, 402, 475
Sau3AI GATC 3 cut(s) 4, 231, 555
SchI GAGTC 1 cut(s) 934
ScrFI CCNGG 5 cut(s) 284, 326, 527, 528, 569
SduI GDGCHC 2 cut(s) 533, 543
SfaNI GCATC 4 cut(s) 182, 390, 516, 761
SfcI CTRYAG 1 cut(s) 216
Sfr274I CTCGAG 1 cut(s) 581
Sfr303I CCGCGG 1 cut(s) 369
SgrBI CCGCGG 1 cut(s) 369
SinI GGWCC 2 cut(s) 670, 810
SlaI CTCGAG 1 cut(s) 581
SmaI CCCGGG 1 cut(s) 528
SmiMI CAYNNNNRTG 3 cut(s) 163, 416, 704
SmlI CTYRAG 2 cut(s) 455, 581
SmoI CTYRAG 2 cut(s) 455, 581
Sse9I AATT 3 cut(s) 225, 312, 786
SsiI CCGC 4 cut(s) 299, 366, 368, 640
SspMI CTAG 3 cut(s) 179, 440, 768
StyD4I CCNGG 5 cut(s) 282, 324, 525, 526, 567
StyI CCWWGG 2 cut(s) 447, 654
TaaI ACNGT 3 cut(s) 517, 550, 733
TaiI ACGT 3 cut(s) 867, 873, 903
TaqI TCGA 4 cut(s) 582, 617, 633, 716
TasI AATT 3 cut(s) 225, 312, 786
TatI WGTACW 1 cut(s) 408
TauI GCSGC 2 cut(s) 302, 371
TfiI GAWTC 1 cut(s) 304
Tru1I TTAA 2 cut(s) 68, 468
Tru9I TTAA 2 cut(s) 68, 468
TscAI CASTG 3 cut(s) 378, 738, 824
TseI GCWGC 3 cut(s) 200, 401, 474
TspDTI ATGAA 3 cut(s) 32, 406, 773
TspMI CCCGGG 1 cut(s) 526
TspRI CASTG 3 cut(s) 378, 738, 824
Van91I CCANNNNNTGG 1 cut(s) 655
VpaK11BI GGWCC 2 cut(s) 670, 810
VspI ATTAAT 1 cut(s) 68
XhoI CTCGAG 1 cut(s) 581
XmaI CCCGGG 1 cut(s) 526
XspI CTAG 3 cut(s) 179, 440, 768
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.