Rmu_sc0003433.1_g000005

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003433.1
OG0000268
Physical Location & Seq
Reverse (-)
26840 .. 32089
5250 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003433.1_g000005.1.cds

Sequence Viewer

Length: 2367 bp
atgttgtggaggcatcttggcaagggcgggaacgtggcttcccggcgacggatttgcctattccggataccgtggggtagcttgaacatagggctacaagatgcaagtagcggttgggcctcaccatggcttgtgggtgtcctaaagaagcatgagcgcatgagggagatacctttgtccttagtattaaagcggtggacaaagcaagcaaaatctgaagttcactccacagtgcccaaggaaaatatgcctagtgaagctgtaagattggccaggcatggagatttaagttatttaagtagcagggtatcatatcttgcttcacagacaaaggagggtaccgacattttgaagaaagaactcagcagattggagccgatacttggagatgttttgaagcaacaaaaagatttcagaaaagaggttgcttttcaatggcatacgttgaaccctaatcagaaggccgaatattttgttccaaactcgaatgattccaatgcaattcctaaggtcaatagtgatactttagcagactcaaaattcatggccacacggtgtagtccgaaaaagtttcaagatcttgtttccatattttcagaagatcaaattactgcagcaaagggaatgggatttggtaccttgttgcaattgtcctacactagagtacaccatgatttgtgtggcttcttggtagataagtttgacacagaaaatcgatcaattgagttgcatggtaggacagtgagtattagttcttcggaatttcaacatattatgggtgtacctgaaggtggaacgaatatagatttcattggctcgagtgatgacaactctgatatgaagaagaaatcaagatacatgtgcggttgcgtcctctttttacaagtttattattacaatattgttgcatatgggagagctcttatagattattcaaggcctcctattactgtttggggtgaaaaggagtcatcaaaattaattaagtggatctcaaaaaaaggaggttatgaaagtcttgatgttaatctagttcccaaaattgatattgtgaagacacatgagcatgaagtgggagatatgtatgttttgaaaaatgatgtagaatatttgaagaatgctgtttgtaatattgacaaatcagttgacgagctgaaaggtgttgttggtaccattcttccaaatgttgtgggagagctgaaaggtgtttttggtagtaatacgatgacaaacgctttgggggacctgaaagaggaatttttcaaagcgataaatgaactgaaagagccatatgtcaaggaagatctagttgcttcttcatgtcagatattaagcgaagatgacgttgagccaccaaatatcgaggtcaaggctagggagcctagcaccaaaaaaataattataaaaaaggaggcctcatcgaatgatattagtccaaagaatcttcgacgcactggtgaaagaaagcctggccatcaaatctcaagtccatttgtgcatttagggaagttggaagtgatggggaataaaatagatcttttaactacaaaacttatggaggataagccaagaaagctgcaagatattggtcctttcacagggtgtcgtgatctttatgatgacgacgtatatttgatcgcctttgtatttctggaatcggaagatctagatttcaaaatttttcaaactgattatgaacatcttgaccgttcggcaatgaaatgcctagagccagggggacttgttacctccgagatatttatccccatcctggatccagatactaccccaaaccactggttcttcattgtgattaaattagcgagaacagatgtagagatatgggacacttacccgaaccctgcacgcactatggctcgaaatgatcttgtttattatgtgcttttggcattggacacaatatttgacactgaaatccaaagctgtttcaagaaaggatggtcgttatgttcattcacagttttcaatgtagatgacattcacattcaacaaaacaactttgattgtggcattttcatgctcagatacataataaactatgataatccattgaaagatgagttagattccgtaaatcgtcgtgtgcaacttgccctttggatgttgaagcacccaaagaaccaagcatgggtgaaaattaatgaggctttagataatgaaaacaaaaatgatggtgccaagaacaagatcaagacaatagaagaaattgacgaagctactggaaatagtgttgatcaacatcatggcaagagctgttcacaagtcgtgcagagaaaaacctcaacactacaagcaaggggtcgtggtcgccctcgtggtgcaaagaataaaaactctcgaaaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

788

Amino Acids

89.5

Weight (kDa)

7.83

Isoelectric Point (pI)

39.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000268)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23642 FvH4_2g09911 FvH4_2g09911 FvH4_2g09911 FvH4_3g18421 FvH4_4g05321 FvH4_6g28332 FvH4_7g31231
prunus_persica Prupe.2G063700_v2.0.a1 Prupe.5G238300_v2.0.a1 Prupe.6G153700_v2.0.a1 Prupe.7G017400_v2.0.a1 Prupe.7G070100_v2.0.a1 Prupe.7G070100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0345471 RchiOBHm_Chr1g0366901 RchiOBHm_Chr2g0162601 RchiOBHm_Chr6g0266661 RchiOBHm_Chr6g0266671
rosa_laevigata RLG00000005047 RLG00000007971 RLG00000008530 RLG00000009009 RLG00000009046 RLG00000014086 RLG00000017162 RLG00000017163 RLG00000017440 RLG00000019098 RLG00000022623 RLG00000024566 RLG00000027733 RLG00000029878 RLG00000029945 RLG00000030127 RLG00000030157 RLG00000031078 RLG00000031080 RLG00000034338 RLG00000034670
rosa_multiflora Rmu_sc0002106.1_g000007 Rmu_sc0002531.1_g000064 Rmu_sc0003433.1_g000005 Rmu_sc0004704.1_g000001 Rmu_sc0004704.1_g000002 Rmu_sc0004888.1_g000042 Rmu_sc0005599.1_g000031 Rmu_sc0006413.1_g000014 Rmu_sc0006413.1_g000018
rosa_roxburghii Rroxscaffold_1G00031940 Rroxscaffold_1G00032500 Rroxscaffold_1G00074770 Rroxscaffold_1G00074780 Rroxscaffold_1G00075150 Rroxscaffold_2G00125060 Rroxscaffold_2G00125070 Rroxscaffold_2G00125800 Rroxscaffold_2G00125820 Rroxscaffold_2G00139560 Rroxscaffold_2G00140550 Rroxscaffold_4G00314090 Rroxscaffold_6G00390050 Rroxscaffold_6G00390520 Rroxscaffold_6G00390530 Rroxscaffold_6G00428030 Rroxscaffold_7G00201570 Rroxscaffold_7G00201580 Rroxscaffold_7G00207070 Rroxscaffold_7G00207080 Rroxscaffold_7G00207240
rosa_rugosa Rorug01G0408000 Rorug01G0408100 Rorug01G0408100 Rorug01G0408200 Rorug02G0155200 Rorug02G0181500 Rorug02G0288400 Rorug03G0208600 Rorug03G0272300 Rorug06G0005500 Rorug06G0005600 Rorug06G0026300.1 Rorug06G0026400 Rorug06G0026500 Rorug06G0026600 Rorug06G0026600 Rorug06G0026600 Rorug06G0145800 Rorug07G0305200
rosa_samantha Rh1AG062100 Rh1BG131900 Rh1BG157000 Rh1CG021100 Rh1CG321600 Rh1DG188200 Rh2DG388300 Rh3AG320500 Rh3BG355400 Rh3CG352400 Rh3CG353200 Rh4AG045800 Rh4DG171700 Rh5AG196000 Rh5AG196100 Rh5CG346800 Rh6BG147600 Rh6BG147700 Rh6CG143200 Rh6CG143500 Rh6CG174600 Rh6CG391800 Rh6DG132100 Rh6DG132300 Rh6DG167100 Rh6DG167200 Rh7AG211600 Rh7BG307000 Rh7BG307300 Rh7BG398300
rosa_wichuraiana Rw0G001830 Rw0G001840 Rw0G018160 Rw0G018170 Rw3G028040 Rw5G017860 Rw5G026710 Rw6G012630 Rw6G012650 Rw6G012780 Rw6G012800 Rw7G019130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1403
Acc65I GGTACC 3 cut(s) 338, 635, 1169
AccB1I GGYRCC 4 cut(s) 338, 635, 1169, 2195
AccIII TCCGGA 1 cut(s) 63
AciI CCGC 4 cut(s) 27, 111, 193, 864
AclWI GGATC 3 cut(s) 998, 1769, 1782
AcoI YGGCCR 3 cut(s) 270, 546, 1471
AcsI RAATTY 4 cut(s) 539, 761, 1256, 1677
AcuI CTGAAG 2 cut(s) 237, 807
AdeI CACNNNGTG 2 cut(s) 555, 1602
AfaI GTAC 5 cut(s) 340, 637, 666, 783, 1171
AfiI CCNNNNNNNGG 8 cut(s) 48, 126, 383, 791, 1252, 1598, 1771, 2149
AflIII ACRYGT 1 cut(s) 858
AjnI CCWGG 4 cut(s) 272, 1468, 1732, 1770
AloI GAACNNNNNNTCC 2 cut(s) 23, 55
AluBI AGCT 9 cut(s) 81, 260, 920, 1153, 1198, 1576, 1944, 2237, 2274
AluI AGCT 9 cut(s) 81, 260, 920, 1153, 1198, 1576, 1944, 2237, 2274
Alw21I GWGCWC 1 cut(s) 922
AlwI GGATC 3 cut(s) 998, 1769, 1782
Ama87I CYCGRG 1 cut(s) 817
Aor13HI TCCGGA 1 cut(s) 63
AoxI GGCC 7 cut(s) 117, 270, 462, 546, 938, 1413, 1471
ApeKI GCWGC 2 cut(s) 614, 1576
ApoI RAATTY 4 cut(s) 539, 761, 1256, 1677
ArsI GACNNNNNNTTYG 6 cut(s) 1219, 1251, 1471, 1503, 1907, 1939
AseI ATTAAT 2 cut(s) 980, 2160
Asp718I GGTACC 3 cut(s) 338, 635, 1169
AspLEI GCGC 1 cut(s) 159
AspS9I GGNCC 3 cut(s) 117, 1243, 1589
AsuC2I CCSGG 1 cut(s) 43
AsuHPI GGTGA 4 cut(s) 114, 971, 1469, 2164
AvaI CYCGRG 1 cut(s) 817
AvaII GGWCC 2 cut(s) 1243, 1589
AxyI CCTNAGG 1 cut(s) 507
BaeGI GKGCMC 1 cut(s) 237
BaeI ACNNNNGTAYC 2 cut(s) 161, 194
BalI TGGCCA 3 cut(s) 272, 548, 1473
BamHI GGATCC 1 cut(s) 1774
BanI GGYRCC 4 cut(s) 338, 635, 1169, 2195
BanII GRGCYC 1 cut(s) 922
BarI GAAGNNNNNNTAC 2 cut(s) 739, 771
BauI CACGAG 1 cut(s) 2334
BbsI GAAGAC 1 cut(s) 1061
Bbv12I GWGCWC 1 cut(s) 922
BbvI GCAGC 2 cut(s) 626, 1563
BccI CCATC 5 cut(s) 1482, 1513, 1775, 1953, 2186
BcgI CGANNNNNNTGC 2 cut(s) 36, 70
BciT130I CCWGG 4 cut(s) 274, 1470, 1734, 1772
BciVI GTATCC 1 cut(s) 60
BclI TGATCA 1 cut(s) 2254
BcnI CCSGG 1 cut(s) 43
BfaI CTAG 8 cut(s) 252, 660, 1031, 1307, 1374, 1383, 1667, 1727
BfmI CTRYAG 1 cut(s) 612
BfuI GTATCC 1 cut(s) 60
BglII AGATCT 4 cut(s) 577, 1303, 1534, 1663
BisI GCNGC 2 cut(s) 615, 1577
BlsI GCNGC 2 cut(s) 616, 1578
Bme1390I CCNGG 5 cut(s) 43, 274, 1470, 1734, 1772
Bme18I GGWCC 2 cut(s) 1243, 1589
BmeT110I CYCGRG 1 cut(s) 817
BmgT120I GGNCC 3 cut(s) 117, 1243, 1589
BmiI GGNNCC 8 cut(s) 340, 375, 637, 1171, 1244, 1380, 1776, 2197
BmrFI CCNGG 5 cut(s) 43, 274, 1470, 1734, 1772
BmsI GCATC 2 cut(s) 22, 91
BpiI GAAGAC 1 cut(s) 1061
BpuEI CTTGAG 1 cut(s) 1468
BpuMI CCSGG 1 cut(s) 43
Bsa29I ATCGAT 1 cut(s) 715
BsaBI GATNNNNATC 3 cut(s) 1026, 1760, 2259
BsaJI CCNNGG 4 cut(s) 71, 125, 237, 1733
BsaWI WCCGGW 1 cut(s) 63
Bsc4I CCNNNNNNNGG 8 cut(s) 48, 126, 383, 791, 1252, 1598, 1771, 2149
Bse1I ACTGG 3 cut(s) 1459, 1802, 2245
Bse21I CCTNAGG 1 cut(s) 507
Bse3DI GCAATG 1 cut(s) 1722
Bse8I GATNNNNATC 3 cut(s) 1026, 1760, 2259
BseAI TCCGGA 1 cut(s) 63
BseBI CCWGG 4 cut(s) 274, 1470, 1734, 1772
BseCI ATCGAT 1 cut(s) 715
BseDI CCNNGG 4 cut(s) 71, 125, 237, 1733
BseGI GGATG 3 cut(s) 1767, 1964, 2127
BseJI GATNNNNATC 3 cut(s) 1026, 1760, 2259
BseLI CCNNNNNNNGG 8 cut(s) 48, 126, 383, 791, 1252, 1598, 1771, 2149
BseMI GCAATG 1 cut(s) 1722
BseMII CTCAG 2 cut(s) 376, 2056
BseNI ACTGG 3 cut(s) 1459, 1802, 2245
BseSI GKGCMC 1 cut(s) 237
BseXI GCAGC 2 cut(s) 626, 1563
BsgI GTGCAG 2 cut(s) 1848, 2309
BshFI GGCC 7 cut(s) 119, 272, 464, 548, 940, 1415, 1473
BshNI GGYRCC 4 cut(s) 338, 635, 1169, 2195
BshVI ATCGAT 1 cut(s) 715
BsiHKAI GWGCWC 1 cut(s) 922
BsiHKCI CYCGRG 1 cut(s) 817
BsiSI CCGG 2 cut(s) 43, 64
BslFI GGGAC 3 cut(s) 1256, 1752, 1859
BslI CCNNNNNNNGG 8 cut(s) 48, 126, 383, 791, 1252, 1598, 1771, 2149
BsmFI GGGAC 3 cut(s) 1256, 1752, 1859
BsmI GAATGC 1 cut(s) 1123
BsnI GGCC 7 cut(s) 119, 272, 464, 548, 940, 1415, 1473
BsoBI CYCGRG 1 cut(s) 817
Bsp1286I GDGCHC 2 cut(s) 237, 922
Bsp13I TCCGGA 1 cut(s) 63
Bsp19I CCATGG 1 cut(s) 125
BspACI CCGC 4 cut(s) 27, 111, 193, 864
BspANI GGCC 7 cut(s) 119, 272, 464, 548, 940, 1415, 1473
BspCNI CTCAG 2 cut(s) 375, 2055
BspDI ATCGAT 1 cut(s) 715
BspEI TCCGGA 1 cut(s) 63
BspLI GGNNCC 8 cut(s) 340, 375, 637, 1171, 1244, 1380, 1776, 2197
BspMAI CTGCAG 1 cut(s) 616
BspPI GGATC 3 cut(s) 998, 1769, 1782
BspT107I GGYRCC 4 cut(s) 338, 635, 1169, 2195
BsrDI GCAATG 1 cut(s) 1722
BsrI ACTGG 3 cut(s) 1459, 1802, 2245
BssECI CCNNGG 4 cut(s) 71, 125, 237, 1733
BssSI CACGAG 1 cut(s) 2334
BssT1I CCWWGG 2 cut(s) 125, 237
Bst2BI CACGAG 1 cut(s) 2334
Bst2UI CCWGG 4 cut(s) 274, 1470, 1734, 1772
Bst4CI ACNGT 7 cut(s) 72, 232, 555, 742, 952, 1709, 1981
BstC8I GCNNGC 2 cut(s) 207, 1867
BstDEI CTNAG 4 cut(s) 181, 362, 507, 2042
BstDSI CCRYGG 2 cut(s) 71, 125
BstENI CCTNNNNNAGG 2 cut(s) 1250, 1596
BstF5I GGATG 3 cut(s) 1767, 1964, 2127
BstHHI GCGC 1 cut(s) 159
BstMWI GCNNNNNNNGC 1 cut(s) 1573
BstNI CCWGG 4 cut(s) 274, 1470, 1734, 1772
BstNSI RCATGY 1 cut(s) 862
BstSCI CCNGG 5 cut(s) 41, 272, 1468, 1732, 1770
BstSFI CTRYAG 1 cut(s) 612
BstSLI GKGCMC 1 cut(s) 237
BstV1I GCAGC 2 cut(s) 626, 1563
BstV2I GAAGAC 1 cut(s) 1061
BstX2I RGATCY 6 cut(s) 577, 990, 1303, 1534, 1663, 1774
BstXI CCANNNNNNTGG 1 cut(s) 1797
BstYI RGATCY 6 cut(s) 577, 990, 1303, 1534, 1663, 1774
Bsu15I ATCGAT 1 cut(s) 715
Bsu36I CCTNAGG 1 cut(s) 507
BsuI GTATCC 1 cut(s) 60
BsuRI GGCC 7 cut(s) 119, 272, 464, 548, 940, 1415, 1473
BsuTUI ATCGAT 1 cut(s) 715
BtgI CCRYGG 2 cut(s) 71, 125
BtsCI GGATG 3 cut(s) 1767, 1964, 2127
BtsIMutI CAGTG 5 cut(s) 237, 747, 1452, 1795, 1929
Cac8I GCNNGC 2 cut(s) 207, 1867
CfoI GCGC 1 cut(s) 159
Cfr13I GGNCC 3 cut(s) 117, 1243, 1589
ClaI ATCGAT 1 cut(s) 715
CseI GACGC 2 cut(s) 859, 1458
Csp6I GTAC 5 cut(s) 339, 636, 665, 782, 1170
CspCI CAANNNNNGTGG 2 cut(s) 1170, 1205
CviQI GTAC 5 cut(s) 339, 636, 665, 782, 1170
DdeI CTNAG 4 cut(s) 181, 362, 507, 2042
DraIII CACNNNGTG 2 cut(s) 555, 1602
EaeI YGGCCR 3 cut(s) 270, 546, 1471
Ecl136II GAGCTC 1 cut(s) 920
Eco130I CCWWGG 2 cut(s) 125, 237
Eco147I AGGCCT 2 cut(s) 940, 1415
Eco24I GRGCYC 1 cut(s) 922
Eco47I GGWCC 2 cut(s) 1243, 1589
Eco53kI GAGCTC 1 cut(s) 920
Eco57I CTGAAG 2 cut(s) 237, 807
Eco81I CCTNAGG 1 cut(s) 507
Eco88I CYCGRG 1 cut(s) 817
EcoICRI GAGCTC 1 cut(s) 920
EcoNI CCTNNNNNAGG 2 cut(s) 1250, 1596
EcoO109I RGGNCCY 1 cut(s) 1243
EcoRII CCWGG 4 cut(s) 272, 1468, 1732, 1770
EcoT14I CCWWGG 2 cut(s) 125, 237
EcoT38I GRGCYC 1 cut(s) 922
ErhI CCWWGG 2 cut(s) 125, 237
FaqI GGGAC 3 cut(s) 1256, 1752, 1859
FauI CCCGC 1 cut(s) 20
FauNDI CATATG 2 cut(s) 910, 1291
FbaI TGATCA 1 cut(s) 2254
Fnu4HI GCNGC 2 cut(s) 615, 1577
FokI GGATG 3 cut(s) 1754, 1971, 2134
FriOI GRGCYC 1 cut(s) 922
Fsp4HI GCNGC 2 cut(s) 615, 1577
FspBI CTAG 8 cut(s) 252, 660, 1031, 1307, 1374, 1383, 1667, 1727
GlaI GCGC 1 cut(s) 158
GluI GCNGC 2 cut(s) 615, 1577
HaeIII GGCC 7 cut(s) 119, 272, 464, 548, 940, 1415, 1473
HapII CCGG 2 cut(s) 43, 64
HgaI GACGC 2 cut(s) 859, 1458
HhaI GCGC 1 cut(s) 159
Hin6I GCGC 1 cut(s) 157
HinP1I GCGC 1 cut(s) 157
HincII GTYRAC 1 cut(s) 1147
HindII GTYRAC 1 cut(s) 1147
HinfI GANTC 6 cut(s) 491, 533, 968, 1441, 1655, 2087
HpaII CCGG 2 cut(s) 43, 64
HphI GGTGA 4 cut(s) 114, 971, 1469, 2164
Hpy166II GTNNAC 6 cut(s) 198, 223, 667, 782, 1147, 2279
Hpy8I GTNNAC 6 cut(s) 198, 223, 667, 782, 1147, 2279
Hpy99I CGWCG 4 cut(s) 51, 1452, 1628, 2103
HpyAV CCTTC 2 cut(s) 454, 782
HpyCH4III ACNGT 7 cut(s) 72, 232, 555, 742, 952, 1709, 1981
HpyCH4IV ACGT 4 cut(s) 33, 443, 1344, 1626
HpyF10VI GCNNNNNNNGC 1 cut(s) 1573
HpyF3I CTNAG 4 cut(s) 181, 362, 507, 2042
HpySE526I ACGT 4 cut(s) 33, 443, 1344, 1626
HspAI GCGC 1 cut(s) 157
Kpn2I TCCGGA 1 cut(s) 63
KpnI GGTACC 3 cut(s) 342, 639, 1173
Ksp22I TGATCA 1 cut(s) 2254
LmnI GCTCC 2 cut(s) 373, 1378
Lsp1109I GCAGC 2 cut(s) 626, 1563
LweI GCATC 2 cut(s) 22, 91
MaeI CTAG 8 cut(s) 252, 660, 1031, 1307, 1374, 1383, 1667, 1727
MaeII ACGT 4 cut(s) 33, 443, 1344, 1626
MaeIII GTNAC 1 cut(s) 1744
MfeI CAATTG 2 cut(s) 647, 720
MflI RGATCY 6 cut(s) 577, 990, 1303, 1534, 1663, 1774
MhlI GDGCHC 2 cut(s) 237, 922
MlsI TGGCCA 3 cut(s) 272, 548, 1473
MluNI TGGCCA 3 cut(s) 272, 548, 1473
MlyI GAGTC 2 cut(s) 527, 977
MmeI TCCRAC 1 cut(s) 1491
Mox20I TGGCCA 3 cut(s) 272, 548, 1473
MroI TCCGGA 1 cut(s) 63
MscI TGGCCA 3 cut(s) 272, 548, 1473
MslI CAYNNNNRTG 2 cut(s) 1065, 2036
Msp20I TGGCCA 3 cut(s) 272, 548, 1473
MspI CCGG 2 cut(s) 43, 64
MspR9I CCNGG 5 cut(s) 43, 274, 1470, 1734, 1772
MunI CAATTG 2 cut(s) 647, 720
Mva1269I GAATGC 1 cut(s) 1123
MvaI CCWGG 4 cut(s) 274, 1470, 1734, 1772
MwoI GCNNNNNNNGC 1 cut(s) 1573
NciI CCSGG 1 cut(s) 43
NcoI CCATGG 1 cut(s) 125
NdeI CATATG 2 cut(s) 910, 1291
NlaIV GGNNCC 8 cut(s) 340, 375, 637, 1171, 1244, 1380, 1776, 2197
NspI RCATGY 1 cut(s) 862
PacI TTAATTAA 1 cut(s) 984
PaeR7I CTCGAG 1 cut(s) 817
PceI AGGCCT 2 cut(s) 940, 1415
PciI ACATGT 1 cut(s) 858
PctI GAATGC 1 cut(s) 1123
PfeI GAWTC 4 cut(s) 491, 1441, 1655, 2087
PfoI TCCNGGA 1 cut(s) 1770
PkrI GCNGC 2 cut(s) 616, 1578
PleI GAGTC 2 cut(s) 527, 976
PpsI GAGTC 2 cut(s) 527, 976
PpuMI RGGWCCY 1 cut(s) 1243
PscI ACATGT 1 cut(s) 858
PshBI ATTAAT 2 cut(s) 980, 2160
PsiI TTATAA 1 cut(s) 1403
Psp124BI GAGCTC 1 cut(s) 922
Psp5II RGGWCCY 1 cut(s) 1243
Psp6I CCWGG 4 cut(s) 272, 1468, 1732, 1770
PspGI CCWGG 4 cut(s) 272, 1468, 1732, 1770
PspN4I GGNNCC 8 cut(s) 340, 375, 637, 1171, 1244, 1380, 1776, 2197
PspPI GGNCC 3 cut(s) 117, 1243, 1589
PspPPI RGGWCCY 1 cut(s) 1243
PspXI VCTCGAGB 1 cut(s) 817
PstI CTGCAG 1 cut(s) 616
PsuI RGATCY 6 cut(s) 577, 990, 1303, 1534, 1663, 1774
RsaI GTAC 5 cut(s) 340, 637, 666, 783, 1171
RsaNI GTAC 5 cut(s) 339, 636, 665, 782, 1170
RseI CAYNNNNRTG 2 cut(s) 1065, 2036
SacI GAGCTC 1 cut(s) 922
SatI GCNGC 2 cut(s) 615, 1577
Sau96I GGNCC 3 cut(s) 117, 1243, 1589
SchI GAGTC 2 cut(s) 527, 977
ScrFI CCNGG 5 cut(s) 43, 274, 1470, 1734, 1772
SduI GDGCHC 2 cut(s) 237, 922
SfaNI GCATC 2 cut(s) 22, 91
SfcI CTRYAG 1 cut(s) 612
Sfr274I CTCGAG 1 cut(s) 817
SinI GGWCC 2 cut(s) 1243, 1589
SlaI CTCGAG 1 cut(s) 817
SmiMI CAYNNNNRTG 2 cut(s) 1065, 2036
SmlI CTYRAG 2 cut(s) 817, 1483
SmoI CTYRAG 2 cut(s) 817, 1483
SseBI AGGCCT 2 cut(s) 940, 1415
SsiI CCGC 4 cut(s) 27, 111, 193, 864
SspI AATATT 5 cut(s) 470, 901, 1109, 1132, 1923
SspMI CTAG 8 cut(s) 252, 660, 1031, 1307, 1374, 1383, 1667, 1727
SstI GAGCTC 1 cut(s) 922
StuI AGGCCT 2 cut(s) 940, 1415
StyD4I CCNGG 5 cut(s) 41, 272, 1468, 1732, 1770
StyI CCWWGG 2 cut(s) 125, 237
TaaI ACNGT 7 cut(s) 72, 232, 555, 742, 952, 1709, 1981
TaiI ACGT 4 cut(s) 36, 446, 1347, 1629
TaqI TCGA 8 cut(s) 485, 715, 818, 1362, 1421, 1447, 1879, 2359
TatI WGTACW 1 cut(s) 664
TfiI GAWTC 4 cut(s) 491, 1441, 1655, 2087
TscAI CASTG 5 cut(s) 237, 747, 1459, 1802, 1936
TseI GCWGC 2 cut(s) 614, 1576
TspGWI ACGGA 2 cut(s) 64, 2080
TspRI CASTG 5 cut(s) 237, 747, 1459, 1802, 1936
VpaK11BI GGWCC 2 cut(s) 1243, 1589
VspI ATTAAT 2 cut(s) 980, 2160
XagI CCTNNNNNAGG 2 cut(s) 1250, 1596
XapI RAATTY 4 cut(s) 539, 761, 1256, 1677
XbaI TCTAGA 1 cut(s) 1666
XceI RCATGY 1 cut(s) 862
XcmI CCANNNNNNNNNTGG 1 cut(s) 677
XhoI CTCGAG 1 cut(s) 817
XspI CTAG 8 cut(s) 252, 660, 1031, 1307, 1374, 1383, 1667, 1727
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.