Rorug01G0408200

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000268
Physical Location & Seq
Reverse (-)
51431497 .. 51433634
2138 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0408200.1

Sequence Viewer

Length: 1587 bp
ATGCCTATCCAACCAGAAGAAGATAGGGATGTATCAACCCTGAACCAAAACCAGAAGCCGAATCTAGTGACAACCCAAAACATGTCTGACGTTACAGCAGAAGAAGATGAAACAACAACAACAACAACCCAGAAGCCGATGCCTCTGCAAGAAGAAGAAGAAGAAGAAGAAGTAGAAGAAGAAGAAGATAGAGATGTATCGACCCAGAACCCGAATCGAGTGATAAACCAAAACCAAAACCAAAACCAAAACATGTTTGATGGAAGAGAAGAAGAAGATGAAACAATAACACCCCAGAACCCGAATCTGGAGATTCCGGAGGATATCATCACCGACATCCTGAAACGGCTGCCGGCCAAGTCTCTGGTTCGGTTCAGATGCGTGTGCAAGCCATGGGACTCTCTGCTCACGGATCCCACCTTCATCAAATCTCATCTGGAGCGAAACCGATCCTTATTCCAATCCAATCTCAAAACCAACACTCGGCTCATTCTGGCCAGGTATTGTGACACCCTTTTGTCTACCACCGACTCGGAAGCCAAGAACGTTATGCAAGCAGAGGAGCTCGACTTTCCTCTGGTTAAGAATCTGCCCTATTACGTTAAGGGTCACTGTGATGGGTTGCTATGTCTGGTTATCAACGACGGCGAAGAGGGTATGCTTGTAATTTACAACCCTTCGATCCAACAGTACAGGAAGCTACCCAGCCCTGCGGGGTTTCGAAGCACTAGGGAGGCGATTGGGATTGGTTATGATAAGACTAAACAAGATTACAAGGTTGTCAGAGTGCCATCAAACTATTGCAGGATGAAGGTCCCTGGTTACAAGCCTAAAGTTGAGGTCTTGGAACTCAAGTCCAATACTTGGAGGCAAATCCCAGATGAGGACACACCTCCTTATTTCGTCGAGCATATTTTTCAGGCTACTGAGGTGAATGGTGGGCTGTATTGGTTGGTTGAGGATCATCATACCGCTAGATGTGTGATTCTAAGGTTCGATTTGGCTGAGGAGAAGTTCAGGGTGATTGCGCCGCCTCCTGATGAGTGTTCCAGGAGCATAGCCTGGATTGGACCTTTGAAGGATTGGCTGTGCGTGGTGCACACTAGAAGGTTGAGTGATGTGCATGTTTGGGCTACAAAAGATGACATGACTTGGACAAGGATCATTACTACTTCCAAGTTTCCGAAGATTCCAGGGAGAGATCCGTTTATGGATTCGTTTCGGTATATGCCATTGTGTTACACTGAGAAAGGAGCTGTGCTGATGAGTGTCAGGGGGGAGAGGTTTCTTACCTTTGATCACAGGAACAATGTGTTTGAACATGTGGCCATCCTTGGCGCCAAGCATTGGCTGCAGGAGACTCTGTATTGCGAGAGCCTTGTTTCGCCGGGTGTTGGTGTCCACCAGACTGAGGCGGCTAGGACTTCTGGCTCCGGTGTCAATCTTCTTCCAGGTGATGACCAAGCAGAGGAGGATGATGGGGAGGCCGAAGGTAGCAGCAGCGTTCTGCGGATGATGGCTAGTTTGAAGAGGGAGCTCGCCAACTTATTGGCTTGTACCGTTGGCCTCAGGAATGCACAAGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

528

Amino Acids

60.3

Weight (kDa)

4.98

Isoelectric Point (pI)

49.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 103 - 141 1.2e-08 F-box domain
F-box-like PF12937 104 - 140 5.9e-07 F-box-like
FBA_3 PF08268 181 - 390 8.7e-20 F-box associated beta propeller domain
FBA_1 PF07734 202 - 461 7.4e-27 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000268)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23642 FvH4_2g09911 FvH4_2g09911 FvH4_2g09911 FvH4_3g18421 FvH4_4g05321 FvH4_6g28332 FvH4_7g31231
prunus_persica Prupe.2G063700_v2.0.a1 Prupe.5G238300_v2.0.a1 Prupe.6G153700_v2.0.a1 Prupe.7G017400_v2.0.a1 Prupe.7G070100_v2.0.a1 Prupe.7G070100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0345471 RchiOBHm_Chr1g0366901 RchiOBHm_Chr2g0162601 RchiOBHm_Chr6g0266661 RchiOBHm_Chr6g0266671
rosa_laevigata RLG00000005047 RLG00000007971 RLG00000008530 RLG00000009009 RLG00000009046 RLG00000014086 RLG00000017162 RLG00000017163 RLG00000017440 RLG00000019098 RLG00000022623 RLG00000024566 RLG00000027733 RLG00000029878 RLG00000029945 RLG00000030127 RLG00000030157 RLG00000031078 RLG00000031080 RLG00000034338 RLG00000034670
rosa_multiflora Rmu_sc0002106.1_g000007 Rmu_sc0002531.1_g000064 Rmu_sc0003433.1_g000005 Rmu_sc0004704.1_g000001 Rmu_sc0004704.1_g000002 Rmu_sc0004888.1_g000042 Rmu_sc0005599.1_g000031 Rmu_sc0006413.1_g000014 Rmu_sc0006413.1_g000018
rosa_roxburghii Rroxscaffold_1G00031940 Rroxscaffold_1G00032500 Rroxscaffold_1G00074770 Rroxscaffold_1G00074780 Rroxscaffold_1G00075150 Rroxscaffold_2G00125060 Rroxscaffold_2G00125070 Rroxscaffold_2G00125800 Rroxscaffold_2G00125820 Rroxscaffold_2G00139560 Rroxscaffold_2G00140550 Rroxscaffold_4G00314090 Rroxscaffold_6G00390050 Rroxscaffold_6G00390520 Rroxscaffold_6G00390530 Rroxscaffold_6G00428030 Rroxscaffold_7G00201570 Rroxscaffold_7G00201580 Rroxscaffold_7G00207070 Rroxscaffold_7G00207080 Rroxscaffold_7G00207240
rosa_rugosa Rorug01G0408000 Rorug01G0408100 Rorug01G0408100 Rorug01G0408200 Rorug02G0155200 Rorug02G0181500 Rorug02G0288400 Rorug03G0208600 Rorug03G0272300 Rorug06G0005500 Rorug06G0005600 Rorug06G0026300.1 Rorug06G0026400 Rorug06G0026500 Rorug06G0026600 Rorug06G0026600 Rorug06G0026600 Rorug06G0145800 Rorug07G0305200
rosa_samantha Rh1AG062100 Rh1BG131900 Rh1BG157000 Rh1CG021100 Rh1CG321600 Rh1DG188200 Rh2DG388300 Rh3AG320500 Rh3BG355400 Rh3CG352400 Rh3CG353200 Rh4AG045800 Rh4DG171700 Rh5AG196000 Rh5AG196100 Rh5CG346800 Rh6BG147600 Rh6BG147700 Rh6CG143200 Rh6CG143500 Rh6CG174600 Rh6CG391800 Rh6DG132100 Rh6DG132300 Rh6DG167100 Rh6DG167200 Rh7AG211600 Rh7BG307000 Rh7BG307300 Rh7BG398300
rosa_wichuraiana Rw0G001830 Rw0G001840 Rw0G018160 Rw0G018170 Rw3G028040 Rw5G017860 Rw5G026710 Rw6G012630 Rw6G012650 Rw6G012780 Rw6G012800 Rw7G019130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1337
AccB7I CCANNNNNTGG 2 cut(s) 864, 1347
AccI GTMKAC 1 cut(s) 521
AccIII TCCGGA 1 cut(s) 316
AciI CCGC 5 cut(s) 713, 972, 1031, 1415, 1510
AclI AACGTT 1 cut(s) 546
AclWI GGATC 7 cut(s) 407, 420, 444, 676, 969, 1169, 1196
AcoI YGGCCR 3 cut(s) 354, 495, 1326
AcyI GRCGYC 1 cut(s) 1338
AfaI GTAC 2 cut(s) 692, 1558
AfiI CCNNNNNNNGG 8 cut(s) 307, 483, 864, 883, 1347, 1394, 1411, 1468
AflIII ACRYGT 3 cut(s) 81, 252, 1321
AgsI TTSAA 3 cut(s) 1078, 1319, 1528
AjnI CCWGG 6 cut(s) 497, 817, 1049, 1061, 1192, 1450
AluBI AGCT 4 cut(s) 565, 700, 1256, 1537
AluI AGCT 4 cut(s) 565, 700, 1256, 1537
Alw21I GWGCWC 3 cut(s) 567, 1101, 1539
Alw26I GTCTC 2 cut(s) 366, 1352
Alw44I GTGCAC 1 cut(s) 1097
AlwI GGATC 7 cut(s) 407, 420, 444, 676, 969, 1169, 1196
Aor13HI TCCGGA 1 cut(s) 316
AoxI GGCC 5 cut(s) 354, 495, 1326, 1485, 1564
ApaLI GTGCAC 1 cut(s) 1097
ApeKI GCWGC 4 cut(s) 349, 1351, 1497, 1500
AspLEI GCGC 2 cut(s) 1030, 1340
AspS9I GGNCC 2 cut(s) 814, 1070
AsuC2I CCSGG 1 cut(s) 1389
AsuHPI GGTGA 4 cut(s) 322, 943, 1033, 1466
AsuII TTCGAA 1 cut(s) 721
AvaII GGWCC 2 cut(s) 814, 1070
AxyI CCTNAGG 1 cut(s) 1568
BaeGI GKGCMC 1 cut(s) 1101
BalI TGGCCA 2 cut(s) 497, 1328
BamHI GGATCC 1 cut(s) 412
BanI GGYRCC 1 cut(s) 1337
BanII GRGCYC 2 cut(s) 567, 1539
Bbv12I GWGCWC 3 cut(s) 567, 1101, 1539
BbvCI CCTCAGC 1 cut(s) 1005
BbvI GCAGC 4 cut(s) 336, 1338, 1509, 1512
BccI CCATC 6 cut(s) 254, 611, 799, 1337, 1472, 1510
BceAI ACGGC 2 cut(s) 362, 661
BcgI CGANNNNNNTGC 2 cut(s) 127, 161
BciT130I CCWGG 6 cut(s) 499, 819, 1051, 1063, 1194, 1452
BclI TGATCA 1 cut(s) 1297
BcnI CCSGG 1 cut(s) 1389
BcoDI GTCTC 2 cut(s) 366, 1352
BfaI CTAG 6 cut(s) 65, 729, 975, 1104, 1419, 1521
BfmI CTRYAG 1 cut(s) 1352
BfoI RGCGCY 1 cut(s) 1341
BisI GCNGC 6 cut(s) 350, 1031, 1352, 1416, 1498, 1501
BlsI GCNGC 6 cut(s) 351, 1032, 1353, 1417, 1499, 1502
Bme1390I CCNGG 7 cut(s) 499, 819, 1051, 1063, 1194, 1389, 1452
Bme18I GGWCC 2 cut(s) 814, 1070
BmgT120I GGNCC 2 cut(s) 814, 1070
BmiI GGNNCC 4 cut(s) 414, 816, 1339, 1432
BmrFI CCNGG 7 cut(s) 499, 819, 1051, 1063, 1194, 1389, 1452
BmsI GCATC 2 cut(s) 129, 368
BpmI CTGGAG 2 cut(s) 329, 458
Bpu10I CCTNAGC 1 cut(s) 1005
Bpu14I TTCGAA 1 cut(s) 721
BpuEI CTTGAG 1 cut(s) 836
BpuMI CCSGG 1 cut(s) 1389
BsaHI GRCGYC 1 cut(s) 1338
BsaJI CCNNGG 4 cut(s) 392, 817, 1193, 1333
BsaWI WCCGGW 2 cut(s) 316, 1433
BsaXI ACNNNNNCTCC 2 cut(s) 1349, 1379
Bsc4I CCNNNNNNNGG 8 cut(s) 307, 483, 864, 883, 1347, 1394, 1411, 1468
Bse118I RCCGGY 1 cut(s) 352
Bse21I CCTNAGG 1 cut(s) 1568
BseAI TCCGGA 1 cut(s) 316
BseBI CCWGG 6 cut(s) 499, 819, 1051, 1063, 1194, 1452
BseDI CCNNGG 4 cut(s) 392, 817, 1193, 1333
BseGI GGATG 6 cut(s) 34, 336, 813, 1329, 1480, 1518
BseLI CCNNNNNNNGG 8 cut(s) 307, 483, 864, 883, 1347, 1394, 1411, 1468
BseMII CTCAG 5 cut(s) 918, 996, 1236, 1401, 1582
BseRI GAGGAG 3 cut(s) 575, 1022, 1484
BseSI GKGCMC 1 cut(s) 1101
BseXI GCAGC 4 cut(s) 336, 1338, 1509, 1512
BseYI CCCAGC 1 cut(s) 704
BshFI GGCC 5 cut(s) 356, 497, 1328, 1487, 1566
BshNI GGYRCC 1 cut(s) 1337
BsiHKAI GWGCWC 3 cut(s) 567, 1101, 1539
BsiSI CCGG 4 cut(s) 317, 353, 1388, 1434
BslFI GGGAC 2 cut(s) 410, 800
BslI CCNNNNNNNGG 8 cut(s) 307, 483, 864, 883, 1347, 1394, 1411, 1468
BsmAI GTCTC 2 cut(s) 366, 1352
BsmFI GGGAC 2 cut(s) 410, 800
BsmI GAATGC 1 cut(s) 1579
BsnI GGCC 5 cut(s) 356, 497, 1328, 1487, 1566
Bsp119I TTCGAA 1 cut(s) 721
Bsp1286I GDGCHC 3 cut(s) 567, 1101, 1539
Bsp13I TCCGGA 1 cut(s) 316
Bsp143I GATC 7 cut(s) 412, 449, 681, 961, 1161, 1201, 1297
Bsp19I CCATGG 1 cut(s) 392
BspACI CCGC 5 cut(s) 713, 972, 1031, 1415, 1510
BspANI GGCC 5 cut(s) 356, 497, 1328, 1487, 1566
BspCNI CTCAG 5 cut(s) 919, 997, 1237, 1402, 1581
BspEI TCCGGA 1 cut(s) 316
BspLI GGNNCC 4 cut(s) 414, 816, 1339, 1432
BspMAI CTGCAG 1 cut(s) 1356
BspPI GGATC 7 cut(s) 407, 420, 444, 676, 969, 1169, 1196
BspT104I TTCGAA 1 cut(s) 721
BspT107I GGYRCC 1 cut(s) 1337
BsrFI RCCGGY 1 cut(s) 352
BssAI RCCGGY 1 cut(s) 352
BssECI CCNNGG 4 cut(s) 392, 817, 1193, 1333
BssMI GATC 7 cut(s) 412, 449, 681, 961, 1161, 1201, 1297
BssNI GRCGYC 1 cut(s) 1338
BssT1I CCWWGG 2 cut(s) 392, 1333
Bst2UI CCWGG 6 cut(s) 499, 819, 1051, 1063, 1194, 1452
Bst4CI ACNGT 3 cut(s) 614, 690, 1561
Bst6I CTCTTC 3 cut(s) 259, 645, 1523
BstACI GRCGYC 1 cut(s) 1338
BstAPI GCANNNNNTGC 1 cut(s) 1351
BstBI TTCGAA 1 cut(s) 721
BstC8I GCNNGC 4 cut(s) 354, 389, 555, 1539
BstDEI CTNAG 6 cut(s) 927, 989, 1005, 1245, 1410, 1568
BstDSI CCRYGG 1 cut(s) 392
BstF5I GGATG 6 cut(s) 34, 336, 813, 1329, 1480, 1518
BstH2I RGCGCY 1 cut(s) 1341
BstHHI GCGC 2 cut(s) 1030, 1340
BstKTI GATC 7 cut(s) 415, 452, 684, 964, 1164, 1204, 1300
BstMAI GTCTC 2 cut(s) 366, 1352
BstMBI GATC 7 cut(s) 412, 449, 681, 961, 1161, 1201, 1297
BstMWI GCNNNNNNNGC 1 cut(s) 1351
BstNI CCWGG 6 cut(s) 499, 819, 1051, 1063, 1194, 1452
BstNSI RCATGY 4 cut(s) 85, 256, 1127, 1325
BstSCI CCNGG 7 cut(s) 497, 817, 1049, 1061, 1192, 1387, 1450
BstSFI CTRYAG 1 cut(s) 1352
BstSLI GKGCMC 1 cut(s) 1101
BstV1I GCAGC 4 cut(s) 336, 1338, 1509, 1512
BstX2I RGATCY 2 cut(s) 412, 1201
BstXI CCANNNNNNTGG 2 cut(s) 364, 1549
BstYI RGATCY 2 cut(s) 412, 1201
Bsu36I CCTNAGG 1 cut(s) 1568
BsuRI GGCC 5 cut(s) 356, 497, 1328, 1487, 1566
BtgI CCRYGG 1 cut(s) 392
BtsCI GGATG 6 cut(s) 34, 336, 813, 1329, 1480, 1518
BtsIMutI CAGTG 2 cut(s) 610, 1242
Cac8I GCNNGC 4 cut(s) 354, 389, 555, 1539
CfoI GCGC 2 cut(s) 1030, 1340
Cfr10I RCCGGY 1 cut(s) 352
Cfr13I GGNCC 2 cut(s) 814, 1070
Csp6I GTAC 2 cut(s) 691, 1557
CviAII CATG 6 cut(s) 82, 253, 393, 1124, 1147, 1322
CviQI GTAC 2 cut(s) 691, 1557
DdeI CTNAG 6 cut(s) 927, 989, 1005, 1245, 1410, 1568
DinI GGCGCC 1 cut(s) 1339
DpnI GATC 7 cut(s) 414, 451, 683, 963, 1163, 1203, 1299
DpnII GATC 7 cut(s) 412, 449, 681, 961, 1161, 1201, 1297
EaeI YGGCCR 3 cut(s) 354, 495, 1326
Eam1104I CTCTTC 3 cut(s) 259, 645, 1523
EarI CTCTTC 3 cut(s) 259, 645, 1523
Ecl136II GAGCTC 2 cut(s) 565, 1537
Eco130I CCWWGG 2 cut(s) 392, 1333
Eco24I GRGCYC 2 cut(s) 567, 1539
Eco32I GATATC 1 cut(s) 325
Eco47I GGWCC 2 cut(s) 814, 1070
Eco53kI GAGCTC 2 cut(s) 565, 1537
Eco81I CCTNAGG 1 cut(s) 1568
EcoICRI GAGCTC 2 cut(s) 565, 1537
EcoO109I RGGNCCY 1 cut(s) 814
EcoRII CCWGG 6 cut(s) 497, 817, 1049, 1061, 1192, 1450
EcoRV GATATC 1 cut(s) 325
EcoT14I CCWWGG 2 cut(s) 392, 1333
EcoT38I GRGCYC 2 cut(s) 567, 1539
EgeI GGCGCC 1 cut(s) 1339
EheI GGCGCC 1 cut(s) 1339
ErhI CCWWGG 2 cut(s) 392, 1333
FaeI CATG 6 cut(s) 85, 256, 396, 1127, 1150, 1325
FaqI GGGAC 2 cut(s) 410, 800
FatI CATG 6 cut(s) 81, 252, 392, 1123, 1146, 1321
FauI CCCGC 1 cut(s) 706
FbaI TGATCA 1 cut(s) 1297
FblI GTMKAC 1 cut(s) 521
Fnu4HI GCNGC 6 cut(s) 350, 1031, 1352, 1416, 1498, 1501
FokI GGATG 6 cut(s) 41, 323, 820, 1316, 1487, 1525
FriOI GRGCYC 2 cut(s) 567, 1539
Fsp4HI GCNGC 6 cut(s) 350, 1031, 1352, 1416, 1498, 1501
FspBI CTAG 6 cut(s) 65, 729, 975, 1104, 1419, 1521
GlaI GCGC 2 cut(s) 1029, 1339
GluI GCNGC 6 cut(s) 350, 1031, 1352, 1416, 1498, 1501
GsaI CCCAGC 1 cut(s) 708
GsuI CTGGAG 2 cut(s) 329, 458
HaeII RGCGCY 1 cut(s) 1341
HaeIII GGCC 5 cut(s) 356, 497, 1328, 1487, 1566
HapII CCGG 4 cut(s) 317, 353, 1388, 1434
HhaI GCGC 2 cut(s) 1030, 1340
Hin1I GRCGYC 1 cut(s) 1338
Hin1II CATG 6 cut(s) 85, 256, 396, 1127, 1150, 1325
Hin6I GCGC 2 cut(s) 1028, 1338
HinP1I GCGC 2 cut(s) 1028, 1338
HpaII CCGG 4 cut(s) 317, 353, 1388, 1434
HphI GGTGA 4 cut(s) 322, 943, 1033, 1466
Hpy166II GTNNAC 3 cut(s) 522, 1099, 1402
Hpy188I TCNGA 5 cut(s) 88, 377, 535, 785, 1185
Hpy188III TCNNGA 6 cut(s) 308, 317, 340, 437, 1037, 1570
Hpy8I GTNNAC 3 cut(s) 522, 1099, 1402
Hpy99I CGWCG 2 cut(s) 647, 908
HpyAV CCTTC 6 cut(s) 430, 687, 805, 1072, 1101, 1484
HpyCH4III ACNGT 3 cut(s) 614, 690, 1561
HpyCH4IV ACGT 3 cut(s) 90, 546, 600
HpyCH4V TGCA 8 cut(s) 148, 387, 553, 804, 1099, 1123, 1354, 1577
HpyF10VI GCNNNNNNNGC 1 cut(s) 1351
HpyF3I CTNAG 6 cut(s) 927, 989, 1005, 1245, 1410, 1568
HpySE526I ACGT 3 cut(s) 90, 546, 600
Hsp92I GRCGYC 1 cut(s) 1338
Hsp92II CATG 6 cut(s) 85, 256, 396, 1127, 1150, 1325
HspAI GCGC 2 cut(s) 1028, 1338
KasI GGCGCC 1 cut(s) 1337
Kpn2I TCCGGA 1 cut(s) 316
KroI GCCGGC 1 cut(s) 352
KroNI GCCGGC 1 cut(s) 354
Ksp22I TGATCA 1 cut(s) 1297
Kzo9I GATC 7 cut(s) 412, 449, 681, 961, 1161, 1201, 1297
LmnI GCTCC 6 cut(s) 439, 562, 1053, 1253, 1436, 1534
Lsp1109I GCAGC 4 cut(s) 336, 1338, 1509, 1512
LweI GCATC 2 cut(s) 129, 368
MaeI CTAG 6 cut(s) 65, 729, 975, 1104, 1419, 1521
MaeII ACGT 3 cut(s) 90, 546, 600
MaeIII GTNAC 6 cut(s) 67, 91, 506, 608, 821, 1238
MalI GATC 7 cut(s) 414, 451, 683, 963, 1163, 1203, 1299
MboI GATC 7 cut(s) 412, 449, 681, 961, 1161, 1201, 1297
MflI RGATCY 2 cut(s) 412, 1201
MhlI GDGCHC 3 cut(s) 567, 1101, 1539
MlsI TGGCCA 2 cut(s) 497, 1328
MluCI AATT 1 cut(s) 666
MluNI TGGCCA 2 cut(s) 497, 1328
Mly113I GGCGCC 1 cut(s) 1338
MlyI GAGTC 3 cut(s) 392, 524, 1354
MmeI TCCRAC 2 cut(s) 34, 709
Mox20I TGGCCA 2 cut(s) 497, 1328
MroI TCCGGA 1 cut(s) 316
MroNI GCCGGC 1 cut(s) 352
MscI TGGCCA 2 cut(s) 497, 1328
MseI TTAA 2 cut(s) 582, 603
MslI CAYNNNNRTG 1 cut(s) 615
Msp20I TGGCCA 2 cut(s) 497, 1328
MspI CCGG 4 cut(s) 317, 353, 1388, 1434
MspR9I CCNGG 7 cut(s) 499, 819, 1051, 1063, 1194, 1389, 1452
Mva1269I GAATGC 1 cut(s) 1579
MvaI CCWGG 6 cut(s) 499, 819, 1051, 1063, 1194, 1452
MwoI GCNNNNNNNGC 1 cut(s) 1351
NaeI GCCGGC 1 cut(s) 354
NarI GGCGCC 1 cut(s) 1338
NciI CCSGG 1 cut(s) 1389
NcoI CCATGG 1 cut(s) 392
NdeII GATC 7 cut(s) 412, 449, 681, 961, 1161, 1201, 1297
NgoMIV GCCGGC 1 cut(s) 352
NlaIII CATG 6 cut(s) 85, 256, 396, 1127, 1150, 1325
NlaIV GGNNCC 4 cut(s) 414, 816, 1339, 1432
NmeAIII GCCGAG 1 cut(s) 463
NmuCI GTSAC 3 cut(s) 67, 506, 608
NspI RCATGY 4 cut(s) 85, 256, 1127, 1325
NspV TTCGAA 1 cut(s) 721
PciI ACATGT 3 cut(s) 81, 252, 1321
PctI GAATGC 1 cut(s) 1579
PdiI GCCGGC 1 cut(s) 354
PfeI GAWTC 8 cut(s) 61, 214, 304, 313, 586, 985, 1189, 1214
PflMI CCANNNNNTGG 2 cut(s) 864, 1347
PfoI TCCNGGA 1 cut(s) 1049
PkrI GCNGC 6 cut(s) 351, 1032, 1353, 1417, 1499, 1502
PleI GAGTC 3 cut(s) 392, 524, 1354
PluTI GGCGCC 1 cut(s) 1341
PpsI GAGTC 3 cut(s) 392, 524, 1354
PpuMI RGGWCCY 1 cut(s) 814
PscI ACATGT 3 cut(s) 81, 252, 1321
Psp124BI GAGCTC 2 cut(s) 567, 1539
Psp1406I AACGTT 1 cut(s) 546
Psp5II RGGWCCY 1 cut(s) 814
Psp6I CCWGG 6 cut(s) 497, 817, 1049, 1061, 1192, 1450
PspFI CCCAGC 1 cut(s) 704
PspGI CCWGG 6 cut(s) 497, 817, 1049, 1061, 1192, 1450
PspN4I GGNNCC 4 cut(s) 414, 816, 1339, 1432
PspPI GGNCC 2 cut(s) 814, 1070
PspPPI RGGWCCY 1 cut(s) 814
PstI CTGCAG 1 cut(s) 1356
PsuI RGATCY 2 cut(s) 412, 1201
RsaI GTAC 2 cut(s) 692, 1558
RsaNI GTAC 2 cut(s) 691, 1557
RseI CAYNNNNRTG 1 cut(s) 615
SacI GAGCTC 2 cut(s) 567, 1539
SaqAI TTAA 2 cut(s) 582, 603
SatI GCNGC 6 cut(s) 350, 1031, 1352, 1416, 1498, 1501
Sau3AI GATC 7 cut(s) 412, 449, 681, 961, 1161, 1201, 1297
Sau96I GGNCC 2 cut(s) 814, 1070
SchI GAGTC 3 cut(s) 392, 524, 1354
ScrFI CCNGG 7 cut(s) 499, 819, 1051, 1063, 1194, 1389, 1452
SduI GDGCHC 3 cut(s) 567, 1101, 1539
SfaNI GCATC 2 cut(s) 129, 368
SfcI CTRYAG 1 cut(s) 1352
SfoI GGCGCC 1 cut(s) 1339
SfuI TTCGAA 1 cut(s) 721
SinI GGWCC 2 cut(s) 814, 1070
SmiMI CAYNNNNRTG 1 cut(s) 615
SmlI CTYRAG 1 cut(s) 851
SmoI CTYRAG 1 cut(s) 851
Sse9I AATT 1 cut(s) 666
SsiI CCGC 5 cut(s) 713, 972, 1031, 1415, 1510
SspDI GGCGCC 1 cut(s) 1337
SspMI CTAG 6 cut(s) 65, 729, 975, 1104, 1419, 1521
SstI GAGCTC 2 cut(s) 567, 1539
StyD4I CCNGG 7 cut(s) 497, 817, 1049, 1061, 1192, 1387, 1450
StyI CCWWGG 2 cut(s) 392, 1333
TaaI ACNGT 3 cut(s) 614, 690, 1561
TaiI ACGT 3 cut(s) 93, 549, 603
TaqI TCGA 7 cut(s) 200, 217, 567, 680, 721, 906, 996
TasI AATT 1 cut(s) 666
TatI WGTACW 1 cut(s) 690
TauI GCSGC 2 cut(s) 1033, 1418
TfiI GAWTC 8 cut(s) 61, 214, 304, 313, 586, 985, 1189, 1214
Tru1I TTAA 2 cut(s) 582, 603
Tru9I TTAA 2 cut(s) 582, 603
TscAI CASTG 2 cut(s) 617, 1249
TseFI GTSAC 3 cut(s) 67, 506, 608
TseI GCWGC 4 cut(s) 349, 1351, 1497, 1500
Tsp45I GTSAC 3 cut(s) 67, 506, 608
TspDTI ATGAA 4 cut(s) 123, 294, 412, 824
TspGWI ACGGA 2 cut(s) 425, 1194
TspRI CASTG 2 cut(s) 617, 1249
Van91I CCANNNNNTGG 2 cut(s) 864, 1347
VneI GTGCAC 1 cut(s) 1097
VpaK11BI GGWCC 2 cut(s) 814, 1070
XceI RCATGY 4 cut(s) 85, 256, 1127, 1325
XmiI GTMKAC 1 cut(s) 521
XspI CTAG 6 cut(s) 65, 729, 975, 1104, 1419, 1521
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.