protein desumoylation
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Peptidase_C48 | PF02902 | 490 - 594 | 1.3e-08 | Ulp1 protease family, C-terminal catalytic domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 710 |
| AccB1I | GGYRCC | 3 cut(s) | 282, 710, 1877 |
| AciI | CCGC | 3 cut(s) | 405, 1096, 1443 |
| AclWI | GGATC | 4 cut(s) | 539, 792, 1499, 1512 |
| AcsI | RAATTY | 3 cut(s) | 18, 185, 1317 |
| AcuI | CTGAAG | 1 cut(s) | 348 |
| AdeI | CACNNNGTG | 1 cut(s) | 1248 |
| AfaI | GTAC | 2 cut(s) | 324, 712 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 332, 1244, 1501 |
| AflII | CTTAAG | 1 cut(s) | 1469 |
| AflIII | ACRYGT | 1 cut(s) | 399 |
| AjnI | CCWGG | 1 cut(s) | 1500 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1098, 1130 |
| AluBI | AGCT | 7 cut(s) | 26, 694, 841, 1114, 1222, 1919, 1956 |
| AluI | AGCT | 7 cut(s) | 26, 694, 841, 1114, 1222, 1919, 1956 |
| Alw21I | GWGCWC | 1 cut(s) | 1815 |
| Alw26I | GTCTC | 1 cut(s) | 592 |
| AlwI | GGATC | 4 cut(s) | 539, 792, 1499, 1512 |
| Ama87I | CYCGRG | 1 cut(s) | 358 |
| AoxI | GGCC | 3 cut(s) | 108, 1059, 1465 |
| ApeKI | GCWGC | 2 cut(s) | 838, 1222 |
| ApoI | RAATTY | 3 cut(s) | 18, 185, 1317 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 760, 792, 1117, 1149, 1637, 1669 |
| AseI | ATTAAT | 3 cut(s) | 521, 1490, 1842 |
| Asp718I | GGTACC | 1 cut(s) | 710 |
| AspS9I | GGNCC | 2 cut(s) | 1133, 1235 |
| AsuC2I | CCSGG | 1 cut(s) | 1374 |
| AsuHPI | GGTGA | 1 cut(s) | 927 |
| AvaI | CYCGRG | 1 cut(s) | 358 |
| AvaII | GGWCC | 2 cut(s) | 1133, 1235 |
| AxyI | CCTNAGG | 1 cut(s) | 153 |
| BamHI | GGATCC | 1 cut(s) | 1504 |
| BanI | GGYRCC | 3 cut(s) | 282, 710, 1877 |
| BanII | GRGCYC | 1 cut(s) | 463 |
| BbsI | GAAGAC | 1 cut(s) | 993 |
| Bbv12I | GWGCWC | 1 cut(s) | 1815 |
| BbvI | GCAGC | 2 cut(s) | 850, 1209 |
| BccI | CCATC | 4 cut(s) | 1159, 1505, 1683, 1868 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 384, 418 |
| BciT130I | CCWGG | 1 cut(s) | 1502 |
| BclI | TGATCA | 2 cut(s) | 865, 1936 |
| BcnI | CCSGG | 1 cut(s) | 1374 |
| BcoDI | GTCTC | 1 cut(s) | 592 |
| BfaI | CTAG | 6 cut(s) | 99, 572, 956, 1020, 1313, 1367 |
| BfmI | CTRYAG | 2 cut(s) | 171, 259 |
| BfrI | CTTAAG | 1 cut(s) | 1469 |
| BglII | AGATCT | 4 cut(s) | 223, 952, 1180, 1309 |
| BisI | GCNGC | 4 cut(s) | 839, 1096, 1223, 1443 |
| BlsI | GCNGC | 4 cut(s) | 840, 1097, 1224, 1444 |
| Bme1390I | CCNGG | 2 cut(s) | 1374, 1502 |
| Bme18I | GGWCC | 2 cut(s) | 1133, 1235 |
| BmeT110I | CYCGRG | 1 cut(s) | 358 |
| BmgT120I | GGNCC | 2 cut(s) | 1133, 1235 |
| BmiI | GGNNCC | 4 cut(s) | 284, 712, 1506, 1879 |
| BmrFI | CCNGG | 2 cut(s) | 1374, 1502 |
| BpiI | GAAGAC | 1 cut(s) | 993 |
| BpuMI | CCSGG | 1 cut(s) | 1374 |
| BsaAI | YACGTR | 1 cut(s) | 528 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1490, 1941 |
| BsaJI | CCNNGG | 1 cut(s) | 1373 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 332, 1244, 1501 |
| Bse1I | ACTGG | 1 cut(s) | 1532 |
| Bse21I | CCTNAGG | 1 cut(s) | 153 |
| Bse3DI | GCAATG | 2 cut(s) | 1362, 1728 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1490, 1941 |
| BseBI | CCWGG | 1 cut(s) | 1502 |
| BseDI | CCNNGG | 1 cut(s) | 1373 |
| BseGI | GGATG | 4 cut(s) | 898, 1497, 1567, 1694 |
| BseJI | GATNNNNATC | 2 cut(s) | 1490, 1941 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 332, 1244, 1501 |
| BseMI | GCAATG | 2 cut(s) | 1362, 1728 |
| BseMII | CTCAG | 3 cut(s) | 1143, 1383, 1786 |
| BseNI | ACTGG | 1 cut(s) | 1532 |
| BseXI | GCAGC | 2 cut(s) | 850, 1209 |
| BsgI | GTGCAG | 1 cut(s) | 1578 |
| BshFI | GGCC | 3 cut(s) | 110, 1061, 1467 |
| BshNI | GGYRCC | 3 cut(s) | 282, 710, 1877 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1815 |
| BsiHKCI | CYCGRG | 1 cut(s) | 358 |
| BsiSI | CCGG | 1 cut(s) | 1373 |
| BslFI | GGGAC | 1 cut(s) | 1065 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 332, 1244, 1501 |
| BsmAI | GTCTC | 1 cut(s) | 592 |
| BsmFI | GGGAC | 1 cut(s) | 1065 |
| BsnI | GGCC | 3 cut(s) | 110, 1061, 1467 |
| BsoBI | CYCGRG | 1 cut(s) | 358 |
| Bsp1286I | GDGCHC | 2 cut(s) | 463, 1815 |
| BspACI | CCGC | 3 cut(s) | 405, 1096, 1443 |
| BspANI | GGCC | 3 cut(s) | 110, 1061, 1467 |
| BspCNI | CTCAG | 3 cut(s) | 1142, 1384, 1785 |
| BspLI | GGNNCC | 4 cut(s) | 284, 712, 1506, 1879 |
| BspMAI | CTGCAG | 1 cut(s) | 263 |
| BspPI | GGATC | 4 cut(s) | 539, 792, 1499, 1512 |
| BspT107I | GGYRCC | 3 cut(s) | 282, 710, 1877 |
| BspTI | CTTAAG | 1 cut(s) | 1469 |
| BsrDI | GCAATG | 2 cut(s) | 1362, 1728 |
| BsrI | ACTGG | 1 cut(s) | 1532 |
| BssECI | CCNNGG | 1 cut(s) | 1373 |
| Bst2UI | CCWGG | 1 cut(s) | 1502 |
| Bst4CI | ACNGT | 5 cut(s) | 201, 493, 1102, 1349, 1711 |
| Bst6I | CTCTTC | 1 cut(s) | 590 |
| BstAFI | CTTAAG | 1 cut(s) | 1469 |
| BstBAI | YACGTR | 1 cut(s) | 528 |
| BstC8I | GCNNGC | 2 cut(s) | 87, 1597 |
| BstDEI | CTNAG | 4 cut(s) | 153, 1129, 1392, 1772 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 330, 1242 |
| BstF5I | GGATG | 4 cut(s) | 898, 1497, 1567, 1694 |
| BstMAI | GTCTC | 1 cut(s) | 592 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1219, 1409 |
| BstNI | CCWGG | 1 cut(s) | 1502 |
| BstNSI | RCATGY | 2 cut(s) | 89, 403 |
| BstSCI | CCNGG | 2 cut(s) | 1372, 1500 |
| BstSFI | CTRYAG | 2 cut(s) | 171, 259 |
| BstV1I | GCAGC | 2 cut(s) | 850, 1209 |
| BstV2I | GAAGAC | 1 cut(s) | 993 |
| BstX2I | RGATCY | 7 cut(s) | 223, 531, 784, 952, 1180, 1309, 1504 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1527 |
| BstYI | RGATCY | 7 cut(s) | 223, 531, 784, 952, 1180, 1309, 1504 |
| Bsu36I | CCTNAGG | 1 cut(s) | 153 |
| BsuRI | GGCC | 3 cut(s) | 110, 1061, 1467 |
| BtsCI | GGATG | 4 cut(s) | 898, 1497, 1567, 1694 |
| BtsIMutI | CAGTG | 3 cut(s) | 1098, 1525, 1659 |
| Cac8I | GCNNGC | 2 cut(s) | 87, 1597 |
| Cfr13I | GGNCC | 2 cut(s) | 1133, 1235 |
| CseI | GACGC | 1 cut(s) | 400 |
| Csp6I | GTAC | 2 cut(s) | 323, 711 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 711, 746 |
| CviAII | CATG | 9 cut(s) | 86, 190, 400, 602, 902, 969, 1768, 1830, 1946 |
| CviQI | GTAC | 2 cut(s) | 323, 711 |
| DdeI | CTNAG | 4 cut(s) | 153, 1129, 1392, 1772 |
| DraI | TTTAAA | 1 cut(s) | 805 |
| DraIII | CACNNNGTG | 1 cut(s) | 1248 |
| Eam1104I | CTCTTC | 1 cut(s) | 590 |
| EarI | CTCTTC | 1 cut(s) | 590 |
| Eco147I | AGGCCT | 1 cut(s) | 1467 |
| Eco24I | GRGCYC | 1 cut(s) | 463 |
| Eco32I | GATATC | 2 cut(s) | 589, 643 |
| Eco47I | GGWCC | 2 cut(s) | 1133, 1235 |
| Eco57I | CTGAAG | 1 cut(s) | 348 |
| Eco81I | CCTNAGG | 1 cut(s) | 153 |
| Eco88I | CYCGRG | 1 cut(s) | 358 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 330, 1242 |
| EcoRII | CCWGG | 1 cut(s) | 1500 |
| EcoRV | GATATC | 2 cut(s) | 589, 643 |
| EcoT22I | ATGCAT | 1 cut(s) | 91 |
| EcoT38I | GRGCYC | 1 cut(s) | 463 |
| FaeI | CATG | 9 cut(s) | 89, 193, 403, 605, 905, 972, 1771, 1833, 1949 |
| FaqI | GGGAC | 1 cut(s) | 1065 |
| FatI | CATG | 9 cut(s) | 85, 189, 399, 601, 901, 968, 1767, 1829, 1945 |
| FauI | CCCGC | 1 cut(s) | 398 |
| FauNDI | CATATG | 2 cut(s) | 451, 940 |
| FbaI | TGATCA | 2 cut(s) | 865, 1936 |
| Fnu4HI | GCNGC | 4 cut(s) | 839, 1096, 1223, 1443 |
| FokI | GGATG | 4 cut(s) | 905, 1484, 1574, 1701 |
| FriOI | GRGCYC | 1 cut(s) | 463 |
| Fsp4HI | GCNGC | 4 cut(s) | 839, 1096, 1223, 1443 |
| FspBI | CTAG | 6 cut(s) | 99, 572, 956, 1020, 1313, 1367 |
| GluI | GCNGC | 4 cut(s) | 839, 1096, 1223, 1443 |
| HaeIII | GGCC | 3 cut(s) | 110, 1061, 1467 |
| HapII | CCGG | 1 cut(s) | 1373 |
| HgaI | GACGC | 1 cut(s) | 400 |
| Hin1II | CATG | 9 cut(s) | 89, 193, 403, 605, 905, 972, 1771, 1833, 1949 |
| HindIII | AAGCTT | 1 cut(s) | 1112 |
| HinfI | GANTC | 8 cut(s) | 137, 179, 509, 647, 932, 1087, 1301, 1588 |
| HpaII | CCGG | 1 cut(s) | 1373 |
| HphI | GGTGA | 1 cut(s) | 927 |
| Hpy166II | GTNNAC | 1 cut(s) | 323 |
| Hpy188I | TCNGA | 9 cut(s) | 62, 105, 210, 245, 789, 975, 1306, 1393, 1775 |
| Hpy8I | GTNNAC | 1 cut(s) | 323 |
| HpyAV | CCTTC | 2 cut(s) | 100, 323 |
| HpyCH4III | ACNGT | 5 cut(s) | 201, 493, 1102, 1349, 1711 |
| HpyCH4IV | ACGT | 2 cut(s) | 527, 990 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1219, 1409 |
| HpyF3I | CTNAG | 4 cut(s) | 153, 1129, 1392, 1772 |
| HpySE526I | ACGT | 2 cut(s) | 527, 990 |
| Hsp92II | CATG | 9 cut(s) | 89, 193, 403, 605, 905, 972, 1771, 1833, 1949 |
| KpnI | GGTACC | 1 cut(s) | 714 |
| Ksp22I | TGATCA | 2 cut(s) | 865, 1936 |
| Lsp1109I | GCAGC | 2 cut(s) | 850, 1209 |
| MaeI | CTAG | 6 cut(s) | 99, 572, 956, 1020, 1313, 1367 |
| MaeII | ACGT | 2 cut(s) | 527, 990 |
| MaeIII | GTNAC | 4 cut(s) | 855, 933, 1384, 1574 |
| MfeI | CAATTG | 1 cut(s) | 294 |
| MflI | RGATCY | 7 cut(s) | 223, 531, 784, 952, 1180, 1309, 1504 |
| MhlI | GDGCHC | 2 cut(s) | 463, 1815 |
| MlyI | GAGTC | 3 cut(s) | 173, 518, 941 |
| MmeI | TCCRAC | 2 cut(s) | 258, 1137 |
| Mph1103I | ATGCAT | 1 cut(s) | 91 |
| MseI | TTAA | 9 cut(s) | 521, 804, 980, 1187, 1407, 1470, 1490, 1545, 1842 |
| MslI | CAYNNNNRTG | 3 cut(s) | 606, 873, 1766 |
| MspCI | CTTAAG | 1 cut(s) | 1469 |
| MspI | CCGG | 1 cut(s) | 1373 |
| MspR9I | CCNGG | 2 cut(s) | 1374, 1502 |
| MunI | CAATTG | 1 cut(s) | 294 |
| MvaI | CCWGG | 1 cut(s) | 1502 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1219, 1409 |
| NciI | CCSGG | 1 cut(s) | 1374 |
| NdeI | CATATG | 2 cut(s) | 451, 940 |
| NlaIII | CATG | 9 cut(s) | 89, 193, 403, 605, 905, 972, 1771, 1833, 1949 |
| NlaIV | GGNNCC | 4 cut(s) | 284, 712, 1506, 1879 |
| NmeAIII | GCCGAG | 1 cut(s) | 136 |
| NmuCI | GTSAC | 2 cut(s) | 933, 1574 |
| NsiI | ATGCAT | 1 cut(s) | 91 |
| NspI | RCATGY | 2 cut(s) | 89, 403 |
| PaeI | GCATGC | 1 cut(s) | 89 |
| PaeR7I | CTCGAG | 1 cut(s) | 358 |
| PceI | AGGCCT | 1 cut(s) | 1467 |
| PciI | ACATGT | 1 cut(s) | 399 |
| PfeI | GAWTC | 5 cut(s) | 137, 647, 1087, 1301, 1588 |
| PfoI | TCCNGGA | 1 cut(s) | 1500 |
| PkrI | GCNGC | 4 cut(s) | 840, 1097, 1224, 1444 |
| PleI | GAGTC | 3 cut(s) | 173, 517, 940 |
| PpsI | GAGTC | 3 cut(s) | 173, 517, 940 |
| Ppu21I | YACGTR | 1 cut(s) | 528 |
| PscI | ACATGT | 1 cut(s) | 399 |
| PshBI | ATTAAT | 3 cut(s) | 521, 1490, 1842 |
| Psp6I | CCWGG | 1 cut(s) | 1500 |
| PspGI | CCWGG | 1 cut(s) | 1500 |
| PspN4I | GGNNCC | 4 cut(s) | 284, 712, 1506, 1879 |
| PspPI | GGNCC | 2 cut(s) | 1133, 1235 |
| PspXI | VCTCGAGB | 1 cut(s) | 358 |
| PstI | CTGCAG | 1 cut(s) | 263 |
| PsuI | RGATCY | 7 cut(s) | 223, 531, 784, 952, 1180, 1309, 1504 |
| RsaI | GTAC | 2 cut(s) | 324, 712 |
| RsaNI | GTAC | 2 cut(s) | 323, 711 |
| RseI | CAYNNNNRTG | 3 cut(s) | 606, 873, 1766 |
| SaqAI | TTAA | 9 cut(s) | 521, 804, 980, 1187, 1407, 1470, 1490, 1545, 1842 |
| SatI | GCNGC | 4 cut(s) | 839, 1096, 1223, 1443 |
| Sau96I | GGNCC | 2 cut(s) | 1133, 1235 |
| SchI | GAGTC | 3 cut(s) | 173, 518, 941 |
| ScrFI | CCNGG | 2 cut(s) | 1374, 1502 |
| SduI | GDGCHC | 2 cut(s) | 463, 1815 |
| SfcI | CTRYAG | 2 cut(s) | 171, 259 |
| Sfr274I | CTCGAG | 1 cut(s) | 358 |
| SinI | GGWCC | 2 cut(s) | 1133, 1235 |
| SlaI | CTCGAG | 1 cut(s) | 358 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 606, 873, 1766 |
| SmlI | CTYRAG | 2 cut(s) | 358, 1469 |
| SmoI | CTYRAG | 2 cut(s) | 358, 1469 |
| SphI | GCATGC | 1 cut(s) | 89 |
| SseBI | AGGCCT | 1 cut(s) | 1467 |
| SsiI | CCGC | 3 cut(s) | 405, 1096, 1443 |
| SspI | AATATT | 2 cut(s) | 442, 673 |
| SspMI | CTAG | 6 cut(s) | 99, 572, 956, 1020, 1313, 1367 |
| StuI | AGGCCT | 1 cut(s) | 1467 |
| StyD4I | CCNGG | 2 cut(s) | 1372, 1500 |
| TaaI | ACNGT | 5 cut(s) | 201, 493, 1102, 1349, 1711 |
| TaiI | ACGT | 2 cut(s) | 530, 993 |
| TaqI | TCGA | 7 cut(s) | 220, 359, 645, 1067, 1459, 1609, 1752 |
| TauI | GCSGC | 2 cut(s) | 1098, 1445 |
| TfiI | GAWTC | 5 cut(s) | 137, 647, 1087, 1301, 1588 |
| Tru1I | TTAA | 9 cut(s) | 521, 804, 980, 1187, 1407, 1470, 1490, 1545, 1842 |
| Tru9I | TTAA | 9 cut(s) | 521, 804, 980, 1187, 1407, 1470, 1490, 1545, 1842 |
| TscAI | CASTG | 3 cut(s) | 1105, 1532, 1666 |
| TseFI | GTSAC | 2 cut(s) | 933, 1574 |
| TseI | GCWGC | 2 cut(s) | 838, 1222 |
| Tsp45I | GTSAC | 2 cut(s) | 933, 1574 |
| TspGWI | ACGGA | 1 cut(s) | 1574 |
| TspRI | CASTG | 3 cut(s) | 1105, 1532, 1666 |
| Vha464I | CTTAAG | 1 cut(s) | 1469 |
| VpaK11BI | GGWCC | 2 cut(s) | 1133, 1235 |
| VspI | ATTAAT | 3 cut(s) | 521, 1490, 1842 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 330, 1242 |
| XapI | RAATTY | 3 cut(s) | 18, 185, 1317 |
| XbaI | TCTAGA | 1 cut(s) | 1312 |
| XceI | RCATGY | 2 cut(s) | 89, 403 |
| XhoI | CTCGAG | 1 cut(s) | 358 |
| XspI | CTAG | 6 cut(s) | 99, 572, 956, 1020, 1313, 1367 |
| Zsp2I | ATGCAT | 1 cut(s) | 91 |