Rh6CG391800

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0000268
Physical Location & Seq
Reverse (-)
57804148 .. 57809167
5020 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG391800.1

Sequence Viewer

Length: 1998 bp
ATGGCGCCGAAGAAAATAGAAGATGACAAAGCAATCAATTCTGGTGAAGCGGCCAAAAACAAGAAGGTGACGGTTGGCCGATATGCCTTCAACCGATACCTTAACATGTCTTTGTTTAGGAAAATTCAAGCTGATGAGAAAAAGGCAAAGATAGATAATAAGTTCAGAAAAGAGGTTGCTTTTCAATGGCATACATTGAACCCTAGTCAGAAGGCCGAGTATTTTGTTCCAAACTCGAATGATTCCAATGCAATTCCTAAGGTCAATAGTGATACTTTAGCAGACTCAAAATTCATGGTCACACGGTGTAGTCCGAAAAAGTTTCAAGATCTTCTTTCCAGATTTTCAGAAGATCAAATTACTGCAGCAAAGGGAATGGGATTTGGCACCTTGTTGCAATTGTCTTGCACTAGAGTACACCATGATTTTTGTGGCTTCTTGGTAGATAAGTTTGACACAGAAAATCGTTCAATTGAGTTGCATGGTAGGACAATGAGTATTAGTTCTTTGGAATTTCAACATATTATGGGTGTACCTGAAGGAGGAACAAATATAGATTCCATTGGCTCAAGTGATGACAACTCTGATATGAAGGTGCTCTGGGATTTTTTTGTTGACAAATCTGACAGCATATCAATTCCAATCCTATTTCAGAGGCTAGATGAAGCAAAAACAGCAGATGACAATTTCAAAGTCGGTTTTATTTTATTAGCATTGGGTATCTTACTTTGTCCCACTACATCAACAAGCATTCATCCGAAGTATCTTCTGCCATTGAGAGATCCGAAGAAAATAAGACATTTAAATTGGGCAAGTTATAGATTTGAATTTTTGGTGGACAGTGTGCAGTCTTTCAAGCAGAAGAAATCAAGATACATGTGCGGTTGCGTCCTCTTTTTACAAGTTTATTATTACAATATTGTTGCATATGGGAGAGCTCTTATAGATTATTCAAGGCCTCCTGTTACTGTTTGGGGGGAAAAGGAGTCATCAAAATTAATTAAGTGGATCTCAAAAAAAGGAGGTTATGAAAGTCTTGATGTTAATCTAGTTCCCAAAATTGATATTGTGAAGACACATGAGCATGAAGTGGGAGATATGTCTGCTTTGAAAAATGATATAGAATCTTTGAAGAATGCTGCTTGTAATATTGACAAATCAGTTGATGAGCTTAAAGGTGTTGTTGGTACCATTCTTCCAAATGTTGTGGGAGAGCTGAAAGGTGTTTTTGGTAGTAATACGATGACAAACGCTTTGGGGGATCTGAAAGAGGAATTTTTCAAAGCGATAAATGAACTGAAAGAGCATGAAGTGGGAGATATGTCTGCTTTGAAAAATGATATAGAATCTTTGAAGAATGCTGTTTGTAATATTGACAAATCAGTTGATGAGCTGAAAGGTGTTGTTGGTACCATTCTTCCAATAGTTCCAAATGTTTTGGGAGAGCTGAAAGGTGTTTTTGGTAGTAATACGATGACAAACGCTTTGGGGGATTTGAAAGAGGAATTTTTCAAAGCGATAAATGAACTGAAAGAGCCATATGTCAAGGAAGATCTAGTTGCTTCTTCATGTCAGATATTAAGCGAAGATGACGTTGAGCCACCAAATATCGAGGTCAAGGCTAGGGAACTTAGCACTAAAAAAACAATTATAAAGAATGAGGCCTCATCGAATGATATTAGTCCAAAGAATCTTCGACGCACTGTTGAAAGAAAGCCTGGCCATCAAATCTCAAGTCCATTTGTGCATTTAGGGAAGTTGGAAGTGATGGGGAATAAAATAGATCTTTTAACTGCAAAACTTCTGGAGGATAAGCCAAGAAAGCTGCAAGATATTGGTCCTTTCACAGGGTGTCGTGATCTTTATGATGACGACGTATATTTGATTGCGTTTGTATTTCTGGAATCAGAAGATCTAGACCTTTCCGAAATACTTGTCATCAAATTTTTCCACATTAACCCCAGAAATATCGACCTTGGTGGAAGGCCAATCACGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

665

Amino Acids

74.68

Weight (kDa)

6.19

Isoelectric Point (pI)

37.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000268)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23642 FvH4_2g09911 FvH4_2g09911 FvH4_2g09911 FvH4_3g18421 FvH4_4g05321 FvH4_6g28332 FvH4_7g31231
prunus_persica Prupe.2G063700_v2.0.a1 Prupe.5G238300_v2.0.a1 Prupe.6G153700_v2.0.a1 Prupe.7G017400_v2.0.a1 Prupe.7G070100_v2.0.a1 Prupe.7G070100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0345471 RchiOBHm_Chr1g0366901 RchiOBHm_Chr2g0162601 RchiOBHm_Chr6g0266661 RchiOBHm_Chr6g0266671
rosa_laevigata RLG00000005047 RLG00000007971 RLG00000008530 RLG00000009009 RLG00000009046 RLG00000014086 RLG00000017162 RLG00000017163 RLG00000017440 RLG00000019098 RLG00000022623 RLG00000024566 RLG00000027733 RLG00000029878 RLG00000029945 RLG00000030127 RLG00000030157 RLG00000031078 RLG00000031080 RLG00000034338 RLG00000034670
rosa_multiflora Rmu_sc0002106.1_g000007 Rmu_sc0002531.1_g000064 Rmu_sc0003433.1_g000005 Rmu_sc0004704.1_g000001 Rmu_sc0004704.1_g000002 Rmu_sc0004888.1_g000042 Rmu_sc0005599.1_g000031 Rmu_sc0006413.1_g000014 Rmu_sc0006413.1_g000018
rosa_roxburghii Rroxscaffold_1G00031940 Rroxscaffold_1G00032500 Rroxscaffold_1G00074770 Rroxscaffold_1G00074780 Rroxscaffold_1G00075150 Rroxscaffold_2G00125060 Rroxscaffold_2G00125070 Rroxscaffold_2G00125800 Rroxscaffold_2G00125820 Rroxscaffold_2G00139560 Rroxscaffold_2G00140550 Rroxscaffold_4G00314090 Rroxscaffold_6G00390050 Rroxscaffold_6G00390520 Rroxscaffold_6G00390530 Rroxscaffold_6G00428030 Rroxscaffold_7G00201570 Rroxscaffold_7G00201580 Rroxscaffold_7G00207070 Rroxscaffold_7G00207080 Rroxscaffold_7G00207240
rosa_rugosa Rorug01G0408000 Rorug01G0408100 Rorug01G0408100 Rorug01G0408200 Rorug02G0155200 Rorug02G0181500 Rorug02G0288400 Rorug03G0208600 Rorug03G0272300 Rorug06G0005500 Rorug06G0005600 Rorug06G0026300.1 Rorug06G0026400 Rorug06G0026500 Rorug06G0026600 Rorug06G0026600 Rorug06G0026600 Rorug06G0145800 Rorug07G0305200
rosa_samantha Rh1AG062100 Rh1BG131900 Rh1BG157000 Rh1CG021100 Rh1CG321600 Rh1DG188200 Rh2DG388300 Rh3AG320500 Rh3BG355400 Rh3CG352400 Rh3CG353200 Rh4AG045800 Rh4DG171700 Rh5AG196000 Rh5AG196100 Rh5CG346800 Rh6BG147600 Rh6BG147700 Rh6CG143200 Rh6CG143500 Rh6CG174600 Rh6CG391800 Rh6DG132100 Rh6DG132300 Rh6DG167100 Rh6DG167200 Rh7AG211600 Rh7BG307000 Rh7BG307300 Rh7BG398300
rosa_wichuraiana Rw0G001830 Rw0G001840 Rw0G018160 Rw0G018170 Rw3G028040 Rw5G017860 Rw5G026710 Rw6G012630 Rw6G012650 Rw6G012780 Rw6G012800 Rw7G019130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1652
Acc65I GGTACC 2 cut(s) 1187, 1409
AccB1I GGYRCC 4 cut(s) 4, 386, 1187, 1409
AciI CCGC 2 cut(s) 50, 882
AclWI GGATC 3 cut(s) 776, 1016, 1269
AcoI YGGCCR 3 cut(s) 51, 76, 1720
AcsI RAATTY 7 cut(s) 123, 290, 512, 827, 1274, 1505, 1943
AcuI CTGAAG 1 cut(s) 558
AcyI GRCGYC 1 cut(s) 5
AdeI CACNNNGTG 2 cut(s) 306, 1851
AfaI GTAC 4 cut(s) 417, 534, 1189, 1411
AfiI CCNNNNNNNGG 2 cut(s) 542, 1847
AflIII ACRYGT 2 cut(s) 105, 876
AjnI CCWGG 1 cut(s) 1717
AluBI AGCT 7 cut(s) 131, 938, 1171, 1216, 1393, 1447, 1825
AluI AGCT 7 cut(s) 131, 938, 1171, 1216, 1393, 1447, 1825
Alw21I GWGCWC 2 cut(s) 600, 940
AlwI GGATC 3 cut(s) 776, 1016, 1269
AoxI GGCC 7 cut(s) 51, 76, 213, 956, 1662, 1720, 1985
ApeKI GCWGC 3 cut(s) 365, 1139, 1825
ApoI RAATTY 7 cut(s) 123, 290, 512, 827, 1274, 1505, 1943
ArsI GACNNNNNNTTYG 8 cut(s) 1237, 1269, 1468, 1500, 1720, 1752, 1920, 1952
AseI ATTAAT 1 cut(s) 998
Asp718I GGTACC 2 cut(s) 1187, 1409
AspLEI GCGC 1 cut(s) 7
AspS9I GGNCC 1 cut(s) 1838
AsuHPI GGTGA 2 cut(s) 56, 79
AvaII GGWCC 1 cut(s) 1838
AxyI CCTNAGG 1 cut(s) 258
BalI TGGCCA 1 cut(s) 1722
BanI GGYRCC 4 cut(s) 4, 386, 1187, 1409
BanII GRGCYC 1 cut(s) 940
BbsI GAAGAC 1 cut(s) 1079
Bbv12I GWGCWC 2 cut(s) 600, 940
BbvI GCAGC 3 cut(s) 377, 1126, 1812
BccI CCATC 2 cut(s) 1731, 1762
BciT130I CCWGG 1 cut(s) 1719
BfaI CTAG 7 cut(s) 204, 411, 659, 1049, 1556, 1623, 1916
BfmI CTRYAG 1 cut(s) 363
BfoI RGCGCY 1 cut(s) 8
BglII AGATCT 4 cut(s) 328, 1552, 1783, 1912
BisI GCNGC 4 cut(s) 51, 366, 1140, 1826
BlsI GCNGC 4 cut(s) 52, 367, 1141, 1827
Bme1390I CCNGG 1 cut(s) 1719
Bme18I GGWCC 1 cut(s) 1838
BmgT120I GGNCC 1 cut(s) 1838
BmiI GGNNCC 4 cut(s) 6, 388, 1189, 1411
BmrFI CCNGG 1 cut(s) 1719
BpiI GAAGAC 1 cut(s) 1079
BpmI CTGGAG 1 cut(s) 1826
BpuEI CTTGAG 2 cut(s) 553, 1717
BsaAI YACGTR 1 cut(s) 1995
BsaBI GATNNNNATC 1 cut(s) 1044
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 1 cut(s) 1975
Bsc4I CCNNNNNNNGG 2 cut(s) 542, 1847
Bse21I CCTNAGG 1 cut(s) 258
Bse8I GATNNNNATC 1 cut(s) 1044
BseBI CCWGG 1 cut(s) 1719
BseDI CCNNGG 1 cut(s) 1975
BseGI GGATG 1 cut(s) 754
BseJI GATNNNNATC 1 cut(s) 1044
BseLI CCNNNNNNNGG 2 cut(s) 542, 1847
BseXI GCAGC 3 cut(s) 377, 1126, 1812
BsgI GTGCAG 1 cut(s) 866
BshFI GGCC 7 cut(s) 53, 78, 215, 958, 1664, 1722, 1987
BshNI GGYRCC 4 cut(s) 4, 386, 1187, 1409
BsiHKAI GWGCWC 2 cut(s) 600, 940
BslFI GGGAC 1 cut(s) 717
BslI CCNNNNNNNGG 2 cut(s) 542, 1847
BsmFI GGGAC 1 cut(s) 717
BsmI GAATGC 3 cut(s) 750, 1141, 1363
BsnI GGCC 7 cut(s) 53, 78, 215, 958, 1664, 1722, 1987
Bsp1286I GDGCHC 2 cut(s) 600, 940
Bsp143I GATC 9 cut(s) 328, 352, 781, 1008, 1261, 1552, 1783, 1858, 1912
BspACI CCGC 2 cut(s) 50, 882
BspANI GGCC 7 cut(s) 53, 78, 215, 958, 1664, 1722, 1987
BspLI GGNNCC 4 cut(s) 6, 388, 1189, 1411
BspMAI CTGCAG 1 cut(s) 367
BspPI GGATC 3 cut(s) 776, 1016, 1269
BspT107I GGYRCC 4 cut(s) 4, 386, 1187, 1409
BssECI CCNNGG 1 cut(s) 1975
BssMI GATC 9 cut(s) 328, 352, 781, 1008, 1261, 1552, 1783, 1858, 1912
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 1 cut(s) 1975
Bst2UI CCWGG 1 cut(s) 1719
Bst4CI ACNGT 5 cut(s) 73, 306, 842, 970, 1705
BstACI GRCGYC 1 cut(s) 5
BstBAI YACGTR 1 cut(s) 1995
BstDEI CTNAG 2 cut(s) 258, 1631
BstENI CCTNNNNNAGG 2 cut(s) 540, 1845
BstF5I GGATG 1 cut(s) 754
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 1 cut(s) 7
BstKTI GATC 9 cut(s) 331, 355, 784, 1011, 1264, 1555, 1786, 1861, 1915
BstMBI GATC 9 cut(s) 328, 352, 781, 1008, 1261, 1552, 1783, 1858, 1912
BstMWI GCNNNNNNNGC 2 cut(s) 674, 1822
BstNI CCWGG 1 cut(s) 1719
BstNSI RCATGY 2 cut(s) 109, 880
BstSCI CCNGG 1 cut(s) 1717
BstSFI CTRYAG 1 cut(s) 363
BstV1I GCAGC 3 cut(s) 377, 1126, 1812
BstV2I GAAGAC 1 cut(s) 1079
BstX2I RGATCY 7 cut(s) 328, 781, 1008, 1261, 1552, 1783, 1912
BstYI RGATCY 7 cut(s) 328, 781, 1008, 1261, 1552, 1783, 1912
Bsu36I CCTNAGG 1 cut(s) 258
BsuRI GGCC 7 cut(s) 53, 78, 215, 958, 1664, 1722, 1987
BtsCI GGATG 1 cut(s) 754
BtsIMutI CAGTG 2 cut(s) 847, 1701
CfoI GCGC 1 cut(s) 7
Cfr13I GGNCC 1 cut(s) 1838
CseI GACGC 2 cut(s) 877, 1707
Csp6I GTAC 4 cut(s) 416, 533, 1188, 1410
CspCI CAANNNNNGTGG 2 cut(s) 1188, 1223
CviAII CATG 9 cut(s) 106, 295, 422, 482, 877, 1079, 1085, 1307, 1569
CviQI GTAC 4 cut(s) 416, 533, 1188, 1410
DdeI CTNAG 2 cut(s) 258, 1631
DinI GGCGCC 1 cut(s) 6
DpnI GATC 9 cut(s) 330, 354, 783, 1010, 1263, 1554, 1785, 1860, 1914
DpnII GATC 9 cut(s) 328, 352, 781, 1008, 1261, 1552, 1783, 1858, 1912
DraI TTTAAA 1 cut(s) 804
DraIII CACNNNGTG 2 cut(s) 306, 1851
EaeI YGGCCR 3 cut(s) 51, 76, 1720
Ecl136II GAGCTC 1 cut(s) 938
Eco130I CCWWGG 1 cut(s) 1975
Eco147I AGGCCT 2 cut(s) 958, 1664
Eco24I GRGCYC 1 cut(s) 940
Eco47I GGWCC 1 cut(s) 1838
Eco53kI GAGCTC 1 cut(s) 938
Eco57I CTGAAG 1 cut(s) 558
Eco81I CCTNAGG 1 cut(s) 258
EcoICRI GAGCTC 1 cut(s) 938
EcoNI CCTNNNNNAGG 2 cut(s) 540, 1845
EcoRII CCWGG 1 cut(s) 1717
EcoT14I CCWWGG 1 cut(s) 1975
EcoT38I GRGCYC 1 cut(s) 940
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 1975
FaeI CATG 9 cut(s) 109, 298, 425, 485, 880, 1082, 1088, 1310, 1572
FalI AAGNNNNNCTT 2 cut(s) 318, 350
FaqI GGGAC 1 cut(s) 717
FatI CATG 9 cut(s) 105, 294, 421, 481, 876, 1078, 1084, 1306, 1568
FauNDI CATATG 2 cut(s) 928, 1540
Fnu4HI GCNGC 4 cut(s) 51, 366, 1140, 1826
FokI GGATG 1 cut(s) 741
FriOI GRGCYC 1 cut(s) 940
Fsp4HI GCNGC 4 cut(s) 51, 366, 1140, 1826
FspBI CTAG 7 cut(s) 204, 411, 659, 1049, 1556, 1623, 1916
GlaI GCGC 1 cut(s) 6
GluI GCNGC 4 cut(s) 51, 366, 1140, 1826
GsuI CTGGAG 1 cut(s) 1826
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 7 cut(s) 53, 78, 215, 958, 1664, 1722, 1987
HgaI GACGC 2 cut(s) 877, 1707
HhaI GCGC 1 cut(s) 7
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 9 cut(s) 109, 298, 425, 485, 880, 1082, 1088, 1310, 1572
Hin6I GCGC 1 cut(s) 5
HinP1I GCGC 1 cut(s) 5
HincII GTYRAC 1 cut(s) 616
HindII GTYRAC 1 cut(s) 616
HinfI GANTC 8 cut(s) 242, 284, 557, 986, 1124, 1346, 1690, 1904
HphI GGTGA 2 cut(s) 56, 79
Hpy166II GTNNAC 4 cut(s) 418, 533, 616, 838
Hpy188III TCNNGA 8 cut(s) 326, 339, 870, 1037, 1805, 1856, 1901, 1916
Hpy8I GTNNAC 4 cut(s) 418, 533, 616, 838
Hpy99I CGWCG 2 cut(s) 1701, 1877
HpyAV CCTTC 6 cut(s) 58, 97, 205, 533, 586, 1977
HpyCH4III ACNGT 5 cut(s) 73, 306, 842, 970, 1705
HpyCH4IV ACGT 3 cut(s) 1593, 1875, 1994
HpyF10VI GCNNNNNNNGC 2 cut(s) 674, 1822
HpyF3I CTNAG 2 cut(s) 258, 1631
HpySE526I ACGT 3 cut(s) 1593, 1875, 1994
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 9 cut(s) 109, 298, 425, 485, 880, 1082, 1088, 1310, 1572
HspAI GCGC 1 cut(s) 5
KasI GGCGCC 1 cut(s) 4
KpnI GGTACC 2 cut(s) 1191, 1413
Kzo9I GATC 9 cut(s) 328, 352, 781, 1008, 1261, 1552, 1783, 1858, 1912
Lsp1109I GCAGC 3 cut(s) 377, 1126, 1812
MaeI CTAG 7 cut(s) 204, 411, 659, 1049, 1556, 1623, 1916
MaeII ACGT 3 cut(s) 1593, 1875, 1994
MaeIII GTNAC 3 cut(s) 67, 298, 964
MalI GATC 9 cut(s) 330, 354, 783, 1010, 1263, 1554, 1785, 1860, 1914
MboI GATC 9 cut(s) 328, 352, 781, 1008, 1261, 1552, 1783, 1858, 1912
MfeI CAATTG 2 cut(s) 398, 471
MflI RGATCY 7 cut(s) 328, 781, 1008, 1261, 1552, 1783, 1912
MhlI GDGCHC 2 cut(s) 600, 940
MlsI TGGCCA 1 cut(s) 1722
MluNI TGGCCA 1 cut(s) 1722
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 2 cut(s) 278, 995
MmeI TCCRAC 1 cut(s) 1740
Mox20I TGGCCA 1 cut(s) 1722
MscI TGGCCA 1 cut(s) 1722
MseI TTAA 9 cut(s) 102, 803, 998, 1002, 1044, 1173, 1580, 1790, 1956
MslI CAYNNNNRTG 1 cut(s) 1083
Msp20I TGGCCA 1 cut(s) 1722
MspR9I CCNGG 1 cut(s) 1719
MunI CAATTG 2 cut(s) 398, 471
Mva1269I GAATGC 3 cut(s) 750, 1141, 1363
MvaI CCWGG 1 cut(s) 1719
MwoI GCNNNNNNNGC 2 cut(s) 674, 1822
NarI GGCGCC 1 cut(s) 5
NdeI CATATG 2 cut(s) 928, 1540
NdeII GATC 9 cut(s) 328, 352, 781, 1008, 1261, 1552, 1783, 1858, 1912
NlaIII CATG 9 cut(s) 109, 298, 425, 485, 880, 1082, 1088, 1310, 1572
NlaIV GGNNCC 4 cut(s) 6, 388, 1189, 1411
NmeAIII GCCGAG 1 cut(s) 241
NmuCI GTSAC 2 cut(s) 67, 298
NspI RCATGY 2 cut(s) 109, 880
PacI TTAATTAA 1 cut(s) 1002
PceI AGGCCT 2 cut(s) 958, 1664
PciI ACATGT 2 cut(s) 105, 876
PctI GAATGC 3 cut(s) 750, 1141, 1363
PfeI GAWTC 6 cut(s) 242, 557, 1124, 1346, 1690, 1904
PkrI GCNGC 4 cut(s) 52, 367, 1141, 1827
PleI GAGTC 2 cut(s) 278, 994
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 2 cut(s) 278, 994
Ppu21I YACGTR 1 cut(s) 1995
PscI ACATGT 2 cut(s) 105, 876
PshBI ATTAAT 1 cut(s) 998
PsiI TTATAA 1 cut(s) 1652
Psp124BI GAGCTC 1 cut(s) 940
Psp6I CCWGG 1 cut(s) 1717
PspGI CCWGG 1 cut(s) 1717
PspN4I GGNNCC 4 cut(s) 6, 388, 1189, 1411
PspPI GGNCC 1 cut(s) 1838
PstI CTGCAG 1 cut(s) 367
PsuI RGATCY 7 cut(s) 328, 781, 1008, 1261, 1552, 1783, 1912
RsaI GTAC 4 cut(s) 417, 534, 1189, 1411
RsaNI GTAC 4 cut(s) 416, 533, 1188, 1410
RseI CAYNNNNRTG 1 cut(s) 1083
SacI GAGCTC 1 cut(s) 940
SaqAI TTAA 9 cut(s) 102, 803, 998, 1002, 1044, 1173, 1580, 1790, 1956
SatI GCNGC 4 cut(s) 51, 366, 1140, 1826
Sau3AI GATC 9 cut(s) 328, 352, 781, 1008, 1261, 1552, 1783, 1858, 1912
Sau96I GGNCC 1 cut(s) 1838
SchI GAGTC 2 cut(s) 278, 995
ScrFI CCNGG 1 cut(s) 1719
SduI GDGCHC 2 cut(s) 600, 940
SfcI CTRYAG 1 cut(s) 363
SfoI GGCGCC 1 cut(s) 6
SinI GGWCC 1 cut(s) 1838
SmiI ATTTAAAT 1 cut(s) 804
SmiMI CAYNNNNRTG 1 cut(s) 1083
SmlI CTYRAG 2 cut(s) 568, 1732
SmoI CTYRAG 2 cut(s) 568, 1732
SseBI AGGCCT 2 cut(s) 958, 1664
SsiI CCGC 2 cut(s) 50, 882
SspDI GGCGCC 1 cut(s) 4
SspI AATATT 3 cut(s) 919, 1150, 1372
SspMI CTAG 7 cut(s) 204, 411, 659, 1049, 1556, 1623, 1916
SstI GAGCTC 1 cut(s) 940
StuI AGGCCT 2 cut(s) 958, 1664
StyD4I CCNGG 1 cut(s) 1717
StyI CCWWGG 1 cut(s) 1975
SwaI ATTTAAAT 1 cut(s) 804
TaaI ACNGT 5 cut(s) 73, 306, 842, 970, 1705
TaiI ACGT 3 cut(s) 1596, 1878, 1997
TaqI TCGA 5 cut(s) 236, 1611, 1670, 1696, 1971
TatI WGTACW 1 cut(s) 415
TauI GCSGC 1 cut(s) 53
TfiI GAWTC 6 cut(s) 242, 557, 1124, 1346, 1690, 1904
Tru1I TTAA 9 cut(s) 102, 803, 998, 1002, 1044, 1173, 1580, 1790, 1956
Tru9I TTAA 9 cut(s) 102, 803, 998, 1002, 1044, 1173, 1580, 1790, 1956
TscAI CASTG 2 cut(s) 847, 1708
TseFI GTSAC 2 cut(s) 67, 298
TseI GCWGC 3 cut(s) 365, 1139, 1825
Tsp45I GTSAC 2 cut(s) 67, 298
TspRI CASTG 2 cut(s) 847, 1708
VpaK11BI GGWCC 1 cut(s) 1838
VspI ATTAAT 1 cut(s) 998
XagI CCTNNNNNAGG 2 cut(s) 540, 1845
XapI RAATTY 7 cut(s) 123, 290, 512, 827, 1274, 1505, 1943
XbaI TCTAGA 1 cut(s) 1915
XceI RCATGY 2 cut(s) 109, 880
XcmI CCANNNNNNNNNTGG 1 cut(s) 428
XspI CTAG 7 cut(s) 204, 411, 659, 1049, 1556, 1623, 1916
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.