Rw5G017860

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000268
Physical Location & Seq
Reverse (-)
22867850 .. 22871717
3868 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G017860.1

Sequence Viewer

Length: 1848 bp
ATGGCGCCGAAGAAAATAAAAGACGACAAAGCAATCAATTCTGGTGAAGCGGCCAAAAACAAGAAGGTGACGGTTGGCCGATATGCGCTCAACCGATACCTGAAAATTCAAGCTGATGAGAAAAAGGCAAAGATAGATAATAAGTGTGCGGTCTTTCAAGCAGAAGAAATCAAGATACATGTGCGGTTGCGTCCTCTTTTTACACTTTATTATTACAATATTGTTGCATATGGGAGAGCTCTTATAGATTATTCAAGGCCTCCTATTACTGTTTGGGGTGAAAAGGAGTCATCAAAATTAATTAAGTGGATCTCAAAAAAAGGAGGTTATGAAAGTCTTGATGTTAATCTAGTTCCCAAAATTGATATTGTGAAGACACATGAGCATGAAGTGGGAGATATGTATGCTTTGAAAAATGATGTAGAATCTTTGAAGAATGCTGTTTGTAATATTGACAAATCAGTTGACGAGCTGAAAGGTGTTGTTGGTACCATTCTTCCAAATGTTGTGGGAGAGCTAAAAGGTGTTTTTGGTAGTAATACGATGACAAACGCTTTGGGGGATTTGAAAGAGGAATTTTTCAAAGTGATAAATGAACTGAAAGAGCATGAAGTGGGAGATATGTCTACTTTGAAAAATGATATAGAATCTTTAAAGAATGTTGTTTGTAATATTGACAAATCAGTTGATGAGCTGAAAGGTGTTGTTGGTACCATTCTTCCAAATGTTGTGGGAGAGCTGAAAGGTGTTTTTGGTAGTAATACGATGACAAACGCTTTGGGGGACCTGAAAGAGGAATTTTTCAAAGCGATAAATGAACTGAAAGAGCCATATGTCAAGGAAGATCTAGTTGCTTCTTCATGTCAGATATTAAGCGAAGATGACATTGAGCCACCAAATATCGAGGTCAAGGCTAGGGAACCTAGCACCAAAAAAACAATTATAAAGAAGGGGGCCTCATCGAATGATATTAGTCCAAAGAATCTTCGACGCACTGTTGAAAGAAAGCCTGGCCATCAAATCTCAAGTCCATTTGTGCATTTAGGGAAGTTGGAAGTGATGGGGAATAAAATAGATCTTTTAACTACAAAACTTATGGAGGATAAGCCAAGAAAGCTGCAAGATATTAGTCCTTTCACAGGGTGTCGTGATCTTTATGATGACGACGTATATTTGATCGCGTTTGTATTTCTGGAATCAGAAGATCTAGATTTCAGAATTTTTCAAACTGATTATGAACATCTTGACCGTTCGGCAATGAAATGCCTAGAGCCAGGATGGAGTACATTGAGTTTGAGTAGAGCAATTACGGCAGCCAAGAAAGGAGGTAATGATTTGTTAGAATTTGCTGCCACGGCACCAAAGAGATTTGCCTCTATATTACAATATCGAAAAGGCCTTAAGAATGGAGAAAAGATATTTATCCCCATCCTGGATCCAGATACTACCTCAAAACACTGGTTCTTCATTGTGATTAAATTAGCGAGAACAGATGTAGATATATGGGACACTTACCCGAACCCTGCGCGCACTATGGCTCGAAATGATCTTGTTTATTATGTGTTAGATTCCGTAAATTGTCGTGTGCAACTTGCCCTTTGGATGTTGAAGCACCCAAAGAACCAAGCATGGGTGAAAATTAATGAGGCTTTAGATAATGAAAACAAAAATGATGGTGCCAAGAACAAGATCAAGACAATAGAAGAAATTGACGAAGCTACTGGAAATAGTGTTGATCAACATCATGGCAAGAGCTGTTCACAAGTCGTGCAGAGAAAAACCTCAACACTACAAGCATGGGGTCGTGGTCGCCCTCGTGGTGCAAAGAATAAAAACTCTCGAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

615

Amino Acids

69.28

Weight (kDa)

8.78

Isoelectric Point (pI)

29.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000268)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23642 FvH4_2g09911 FvH4_2g09911 FvH4_2g09911 FvH4_3g18421 FvH4_4g05321 FvH4_6g28332 FvH4_7g31231
prunus_persica Prupe.2G063700_v2.0.a1 Prupe.5G238300_v2.0.a1 Prupe.6G153700_v2.0.a1 Prupe.7G017400_v2.0.a1 Prupe.7G070100_v2.0.a1 Prupe.7G070100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0345471 RchiOBHm_Chr1g0366901 RchiOBHm_Chr2g0162601 RchiOBHm_Chr6g0266661 RchiOBHm_Chr6g0266671
rosa_laevigata RLG00000005047 RLG00000007971 RLG00000008530 RLG00000009009 RLG00000009046 RLG00000014086 RLG00000017162 RLG00000017163 RLG00000017440 RLG00000019098 RLG00000022623 RLG00000024566 RLG00000027733 RLG00000029878 RLG00000029945 RLG00000030127 RLG00000030157 RLG00000031078 RLG00000031080 RLG00000034338 RLG00000034670
rosa_multiflora Rmu_sc0002106.1_g000007 Rmu_sc0002531.1_g000064 Rmu_sc0003433.1_g000005 Rmu_sc0004704.1_g000001 Rmu_sc0004704.1_g000002 Rmu_sc0004888.1_g000042 Rmu_sc0005599.1_g000031 Rmu_sc0006413.1_g000014 Rmu_sc0006413.1_g000018
rosa_roxburghii Rroxscaffold_1G00031940 Rroxscaffold_1G00032500 Rroxscaffold_1G00074770 Rroxscaffold_1G00074780 Rroxscaffold_1G00075150 Rroxscaffold_2G00125060 Rroxscaffold_2G00125070 Rroxscaffold_2G00125800 Rroxscaffold_2G00125820 Rroxscaffold_2G00139560 Rroxscaffold_2G00140550 Rroxscaffold_4G00314090 Rroxscaffold_6G00390050 Rroxscaffold_6G00390520 Rroxscaffold_6G00390530 Rroxscaffold_6G00428030 Rroxscaffold_7G00201570 Rroxscaffold_7G00201580 Rroxscaffold_7G00207070 Rroxscaffold_7G00207080 Rroxscaffold_7G00207240
rosa_rugosa Rorug01G0408000 Rorug01G0408100 Rorug01G0408100 Rorug01G0408200 Rorug02G0155200 Rorug02G0181500 Rorug02G0288400 Rorug03G0208600 Rorug03G0272300 Rorug06G0005500 Rorug06G0005600 Rorug06G0026300.1 Rorug06G0026400 Rorug06G0026500 Rorug06G0026600 Rorug06G0026600 Rorug06G0026600 Rorug06G0145800 Rorug07G0305200
rosa_samantha Rh1AG062100 Rh1BG131900 Rh1BG157000 Rh1CG021100 Rh1CG321600 Rh1DG188200 Rh2DG388300 Rh3AG320500 Rh3BG355400 Rh3CG352400 Rh3CG353200 Rh4AG045800 Rh4DG171700 Rh5AG196000 Rh5AG196100 Rh5CG346800 Rh6BG147600 Rh6BG147700 Rh6CG143200 Rh6CG143500 Rh6CG174600 Rh6CG391800 Rh6DG132100 Rh6DG132300 Rh6DG167100 Rh6DG167200 Rh7AG211600 Rh7BG307000 Rh7BG307300 Rh7BG398300
rosa_wichuraiana Rw0G001830 Rw0G001840 Rw0G018160 Rw0G018170 Rw3G028040 Rw5G017860 Rw5G026710 Rw6G012630 Rw6G012650 Rw6G012780 Rw6G012800 Rw7G019130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 944
Acc65I GGTACC 2 cut(s) 488, 710
AccB1I GGYRCC 5 cut(s) 4, 488, 710, 1357, 1676
AccI GTMKAC 1 cut(s) 626
AccII CGCG 2 cut(s) 1181, 1528
AciI CCGC 3 cut(s) 50, 149, 184
AclWI GGATC 3 cut(s) 317, 1430, 1443
AcoI YGGCCR 3 cut(s) 51, 76, 1012
AcsI RAATTY 5 cut(s) 105, 575, 797, 1218, 1343
AcyI GRCGYC 1 cut(s) 5
AdeI CACNNNGTG 1 cut(s) 1143
AfaI GTAC 3 cut(s) 490, 712, 1285
AfiI CCNNNNNNNGG 4 cut(s) 793, 1139, 1432, 1630
AflII CTTAAG 1 cut(s) 1400
AflIII ACRYGT 1 cut(s) 178
AjnI CCWGG 3 cut(s) 1009, 1273, 1431
AluBI AGCT 9 cut(s) 113, 239, 472, 517, 694, 739, 1117, 1718, 1755
AluI AGCT 9 cut(s) 113, 239, 472, 517, 694, 739, 1117, 1718, 1755
Alw21I GWGCWC 1 cut(s) 241
AlwI GGATC 3 cut(s) 317, 1430, 1443
AoxI GGCC 6 cut(s) 51, 76, 257, 954, 1012, 1396
ApeKI GCWGC 3 cut(s) 1117, 1313, 1349
ApoI RAATTY 5 cut(s) 105, 575, 797, 1218, 1343
ArsI GACNNNNNNTTYG 6 cut(s) 538, 570, 760, 792, 1012, 1044
AseI ATTAAT 2 cut(s) 299, 1641
Asp718I GGTACC 2 cut(s) 488, 710
AspLEI GCGC 4 cut(s) 7, 88, 1528, 1530
AspS9I GGNCC 2 cut(s) 784, 954
AsuHPI GGTGA 4 cut(s) 56, 79, 290, 1645
AvaII GGWCC 1 cut(s) 784
BalI TGGCCA 1 cut(s) 1014
BamHI GGATCC 1 cut(s) 1435
BanI GGYRCC 5 cut(s) 4, 488, 710, 1357, 1676
BanII GRGCYC 1 cut(s) 241
BauI CACGAG 1 cut(s) 1815
BbsI GAAGAC 1 cut(s) 380
Bbv12I GWGCWC 1 cut(s) 241
BbvI GCAGC 3 cut(s) 1104, 1325, 1336
BccI CCATC 5 cut(s) 1023, 1054, 1272, 1436, 1667
BceAI ACGGC 2 cut(s) 1326, 1371
BciT130I CCWGG 3 cut(s) 1011, 1275, 1433
BclI TGATCA 1 cut(s) 1735
BfaI CTAG 6 cut(s) 350, 848, 915, 924, 1208, 1268
BfoI RGCGCY 1 cut(s) 8
BfrI CTTAAG 1 cut(s) 1400
BglII AGATCT 3 cut(s) 844, 1075, 1204
BisI GCNGC 4 cut(s) 51, 1118, 1314, 1350
BlsI GCNGC 4 cut(s) 52, 1119, 1315, 1351
Bme1390I CCNGG 3 cut(s) 1011, 1275, 1433
Bme18I GGWCC 1 cut(s) 784
BmgT120I GGNCC 2 cut(s) 784, 954
BmiI GGNNCC 9 cut(s) 6, 490, 712, 785, 921, 955, 1359, 1437, 1678
BmrFI CCNGG 3 cut(s) 1011, 1275, 1433
BpiI GAAGAC 1 cut(s) 380
BpuEI CTTGAG 1 cut(s) 1009
BsaBI GATNNNNATC 3 cut(s) 345, 1421, 1740
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 1 cut(s) 1353
Bsc4I CCNNNNNNNGG 4 cut(s) 793, 1139, 1432, 1630
Bse1I ACTGG 2 cut(s) 1463, 1726
Bse3DI GCAATG 1 cut(s) 1263
Bse8I GATNNNNATC 3 cut(s) 345, 1421, 1740
BseBI CCWGG 3 cut(s) 1011, 1275, 1433
BseDI CCNNGG 1 cut(s) 1353
BseGI GGATG 3 cut(s) 1283, 1428, 1608
BseJI GATNNNNATC 3 cut(s) 345, 1421, 1740
BseLI CCNNNNNNNGG 4 cut(s) 793, 1139, 1432, 1630
BseMI GCAATG 1 cut(s) 1263
BseNI ACTGG 2 cut(s) 1463, 1726
BsePI GCGCGC 1 cut(s) 1526
BseXI GCAGC 3 cut(s) 1104, 1325, 1336
BsgI GTGCAG 1 cut(s) 1790
Bsh1236I CGCG 2 cut(s) 1181, 1528
BshFI GGCC 6 cut(s) 53, 78, 259, 956, 1014, 1398
BshNI GGYRCC 5 cut(s) 4, 488, 710, 1357, 1676
BsiHKAI GWGCWC 1 cut(s) 241
BslFI GGGAC 2 cut(s) 797, 1520
BslI CCNNNNNNNGG 4 cut(s) 793, 1139, 1432, 1630
BsmFI GGGAC 2 cut(s) 797, 1520
BsmI GAATGC 1 cut(s) 442
BsnI GGCC 6 cut(s) 53, 78, 259, 956, 1014, 1398
Bsp1286I GDGCHC 1 cut(s) 241
BspACI CCGC 3 cut(s) 50, 149, 184
BspANI GGCC 6 cut(s) 53, 78, 259, 956, 1014, 1398
BspFNI CGCG 2 cut(s) 1181, 1528
BspLI GGNNCC 9 cut(s) 6, 490, 712, 785, 921, 955, 1359, 1437, 1678
BspPI GGATC 3 cut(s) 317, 1430, 1443
BspT107I GGYRCC 5 cut(s) 4, 488, 710, 1357, 1676
BspTI CTTAAG 1 cut(s) 1400
BsrDI GCAATG 1 cut(s) 1263
BsrI ACTGG 2 cut(s) 1463, 1726
BssECI CCNNGG 1 cut(s) 1353
BssHII GCGCGC 1 cut(s) 1526
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 1815
Bst2BI CACGAG 1 cut(s) 1815
Bst2UI CCWGG 3 cut(s) 1011, 1275, 1433
Bst4CI ACNGT 4 cut(s) 73, 271, 997, 1250
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 1400
BstC8I GCNNGC 1 cut(s) 1528
BstDSI CCRYGG 1 cut(s) 1353
BstENI CCTNNNNNAGG 2 cut(s) 791, 1137
BstF5I GGATG 3 cut(s) 1283, 1428, 1608
BstFNI CGCG 2 cut(s) 1181, 1528
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 4 cut(s) 7, 88, 1528, 1530
BstMWI GCNNNNNNNGC 3 cut(s) 1114, 1310, 1355
BstNI CCWGG 3 cut(s) 1011, 1275, 1433
BstNSI RCATGY 1 cut(s) 182
BstSCI CCNGG 3 cut(s) 1009, 1273, 1431
BstUI CGCG 2 cut(s) 1181, 1528
BstV1I GCAGC 3 cut(s) 1104, 1325, 1336
BstV2I GAAGAC 1 cut(s) 380
BstX2I RGATCY 5 cut(s) 309, 844, 1075, 1204, 1435
BstYI RGATCY 5 cut(s) 309, 844, 1075, 1204, 1435
BsuRI GGCC 6 cut(s) 53, 78, 259, 956, 1014, 1398
BtgI CCRYGG 1 cut(s) 1353
BtsCI GGATG 3 cut(s) 1283, 1428, 1608
BtsIMutI CAGTG 2 cut(s) 993, 1456
Cac8I GCNNGC 1 cut(s) 1528
CfoI GCGC 4 cut(s) 7, 88, 1528, 1530
Cfr13I GGNCC 2 cut(s) 784, 954
CseI GACGC 2 cut(s) 179, 999
Csp6I GTAC 3 cut(s) 489, 711, 1284
CspCI CAANNNNNGTGG 4 cut(s) 489, 524, 711, 746
CviAII CATG 8 cut(s) 179, 380, 386, 608, 861, 1629, 1745, 1797
CviQI GTAC 3 cut(s) 489, 711, 1284
DinI GGCGCC 1 cut(s) 6
DraI TTTAAA 1 cut(s) 654
DraIII CACNNNGTG 1 cut(s) 1143
EaeI YGGCCR 3 cut(s) 51, 76, 1012
Ecl136II GAGCTC 1 cut(s) 239
Eco147I AGGCCT 2 cut(s) 259, 1398
Eco24I GRGCYC 1 cut(s) 241
Eco47I GGWCC 1 cut(s) 784
Eco53kI GAGCTC 1 cut(s) 239
EcoICRI GAGCTC 1 cut(s) 239
EcoNI CCTNNNNNAGG 2 cut(s) 791, 1137
EcoO109I RGGNCCY 2 cut(s) 784, 954
EcoRII CCWGG 3 cut(s) 1009, 1273, 1431
EcoT38I GRGCYC 1 cut(s) 241
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
FaeI CATG 8 cut(s) 182, 383, 389, 611, 864, 1632, 1748, 1800
FaqI GGGAC 2 cut(s) 797, 1520
FatI CATG 8 cut(s) 178, 379, 385, 607, 860, 1628, 1744, 1796
FauNDI CATATG 2 cut(s) 229, 832
FbaI TGATCA 1 cut(s) 1735
FblI GTMKAC 1 cut(s) 626
Fnu4HI GCNGC 4 cut(s) 51, 1118, 1314, 1350
FokI GGATG 3 cut(s) 1290, 1415, 1615
FriOI GRGCYC 1 cut(s) 241
Fsp4HI GCNGC 4 cut(s) 51, 1118, 1314, 1350
FspBI CTAG 6 cut(s) 350, 848, 915, 924, 1208, 1268
GlaI GCGC 4 cut(s) 6, 87, 1527, 1529
GluI GCNGC 4 cut(s) 51, 1118, 1314, 1350
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 6 cut(s) 53, 78, 259, 956, 1014, 1398
HgaI GACGC 2 cut(s) 179, 999
HhaI GCGC 4 cut(s) 7, 88, 1528, 1530
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 8 cut(s) 182, 383, 389, 611, 864, 1632, 1748, 1800
Hin6I GCGC 4 cut(s) 5, 86, 1526, 1528
HinP1I GCGC 4 cut(s) 5, 86, 1526, 1528
HincII GTYRAC 1 cut(s) 466
HindII GTYRAC 1 cut(s) 466
HinfI GANTC 6 cut(s) 287, 425, 647, 982, 1196, 1568
HphI GGTGA 4 cut(s) 56, 79, 290, 1645
Hpy166II GTNNAC 3 cut(s) 466, 627, 1760
Hpy188I TCNGA 3 cut(s) 867, 1201, 1217
Hpy188III TCNNGA 9 cut(s) 172, 338, 1148, 1193, 1208, 1244, 1439, 1693, 1839
Hpy8I GTNNAC 3 cut(s) 466, 627, 1760
Hpy99I CGWCG 2 cut(s) 993, 1169
HpyAV CCTTC 2 cut(s) 58, 943
HpyCH4III ACNGT 4 cut(s) 73, 271, 997, 1250
HpyCH4IV ACGT 1 cut(s) 1167
HpyCH4V TGCA 6 cut(s) 227, 1039, 1120, 1588, 1771, 1823
HpyF10VI GCNNNNNNNGC 3 cut(s) 1114, 1310, 1355
HpySE526I ACGT 1 cut(s) 1167
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 8 cut(s) 182, 383, 389, 611, 864, 1632, 1748, 1800
HspAI GCGC 4 cut(s) 5, 86, 1526, 1528
KasI GGCGCC 1 cut(s) 4
KpnI GGTACC 2 cut(s) 492, 714
Ksp22I TGATCA 1 cut(s) 1735
Lsp1109I GCAGC 3 cut(s) 1104, 1325, 1336
MaeI CTAG 6 cut(s) 350, 848, 915, 924, 1208, 1268
MaeII ACGT 1 cut(s) 1167
MaeIII GTNAC 1 cut(s) 67
MflI RGATCY 5 cut(s) 309, 844, 1075, 1204, 1435
MhlI GDGCHC 1 cut(s) 241
MlsI TGGCCA 1 cut(s) 1014
MluNI TGGCCA 1 cut(s) 1014
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 1 cut(s) 296
MmeI TCCRAC 1 cut(s) 1032
Mox20I TGGCCA 1 cut(s) 1014
MscI TGGCCA 1 cut(s) 1014
MseI TTAA 9 cut(s) 299, 303, 345, 653, 872, 1082, 1401, 1476, 1641
MslI CAYNNNNRTG 1 cut(s) 384
Msp20I TGGCCA 1 cut(s) 1014
MspCI CTTAAG 1 cut(s) 1400
MspR9I CCNGG 3 cut(s) 1011, 1275, 1433
Mva1269I GAATGC 1 cut(s) 442
MvaI CCWGG 3 cut(s) 1011, 1275, 1433
MvnI CGCG 2 cut(s) 1181, 1528
MwoI GCNNNNNNNGC 3 cut(s) 1114, 1310, 1355
NarI GGCGCC 1 cut(s) 5
NdeI CATATG 2 cut(s) 229, 832
NlaIII CATG 8 cut(s) 182, 383, 389, 611, 864, 1632, 1748, 1800
NlaIV GGNNCC 9 cut(s) 6, 490, 712, 785, 921, 955, 1359, 1437, 1678
NmuCI GTSAC 1 cut(s) 67
NspI RCATGY 1 cut(s) 182
PacI TTAATTAA 1 cut(s) 303
PauI GCGCGC 1 cut(s) 1526
PceI AGGCCT 2 cut(s) 259, 1398
PciI ACATGT 1 cut(s) 178
PctI GAATGC 1 cut(s) 442
PfeI GAWTC 5 cut(s) 425, 647, 982, 1196, 1568
PfoI TCCNGGA 1 cut(s) 1431
PkrI GCNGC 4 cut(s) 52, 1119, 1315, 1351
PleI GAGTC 1 cut(s) 295
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 1 cut(s) 295
PpuMI RGGWCCY 1 cut(s) 784
PscI ACATGT 1 cut(s) 178
PshBI ATTAAT 2 cut(s) 299, 1641
PsiI TTATAA 1 cut(s) 944
Psp124BI GAGCTC 1 cut(s) 241
Psp5II RGGWCCY 1 cut(s) 784
Psp6I CCWGG 3 cut(s) 1009, 1273, 1431
PspGI CCWGG 3 cut(s) 1009, 1273, 1431
PspN4I GGNNCC 9 cut(s) 6, 490, 712, 785, 921, 955, 1359, 1437, 1678
PspPI GGNCC 2 cut(s) 784, 954
PspPPI RGGWCCY 1 cut(s) 784
PsuI RGATCY 5 cut(s) 309, 844, 1075, 1204, 1435
PteI GCGCGC 1 cut(s) 1526
RsaI GTAC 3 cut(s) 490, 712, 1285
RsaNI GTAC 3 cut(s) 489, 711, 1284
RseI CAYNNNNRTG 1 cut(s) 384
SacI GAGCTC 1 cut(s) 241
SaqAI TTAA 9 cut(s) 299, 303, 345, 653, 872, 1082, 1401, 1476, 1641
SatI GCNGC 4 cut(s) 51, 1118, 1314, 1350
Sau96I GGNCC 2 cut(s) 784, 954
SchI GAGTC 1 cut(s) 296
ScrFI CCNGG 3 cut(s) 1011, 1275, 1433
SduI GDGCHC 1 cut(s) 241
SfoI GGCGCC 1 cut(s) 6
SinI GGWCC 1 cut(s) 784
SmiMI CAYNNNNRTG 1 cut(s) 384
SmlI CTYRAG 2 cut(s) 1024, 1400
SmoI CTYRAG 2 cut(s) 1024, 1400
SseBI AGGCCT 2 cut(s) 259, 1398
SsiI CCGC 3 cut(s) 50, 149, 184
SspDI GGCGCC 1 cut(s) 4
SspI AATATT 3 cut(s) 220, 451, 673
SspMI CTAG 6 cut(s) 350, 848, 915, 924, 1208, 1268
SstI GAGCTC 1 cut(s) 241
StuI AGGCCT 2 cut(s) 259, 1398
StyD4I CCNGG 3 cut(s) 1009, 1273, 1431
TaaI ACNGT 4 cut(s) 73, 271, 997, 1250
TaiI ACGT 1 cut(s) 1170
TaqI TCGA 6 cut(s) 903, 962, 988, 1390, 1540, 1840
TatI WGTACW 1 cut(s) 1283
TauI GCSGC 1 cut(s) 53
TfiI GAWTC 5 cut(s) 425, 647, 982, 1196, 1568
Tru1I TTAA 9 cut(s) 299, 303, 345, 653, 872, 1082, 1401, 1476, 1641
Tru9I TTAA 9 cut(s) 299, 303, 345, 653, 872, 1082, 1401, 1476, 1641
TscAI CASTG 2 cut(s) 1000, 1463
TseFI GTSAC 1 cut(s) 67
TseI GCWGC 3 cut(s) 1117, 1313, 1349
Tsp45I GTSAC 1 cut(s) 67
TspGWI ACGGA 1 cut(s) 1561
TspRI CASTG 2 cut(s) 1000, 1463
Vha464I CTTAAG 1 cut(s) 1400
VpaK11BI GGWCC 1 cut(s) 784
VspI ATTAAT 2 cut(s) 299, 1641
XagI CCTNNNNNAGG 2 cut(s) 791, 1137
XapI RAATTY 5 cut(s) 105, 575, 797, 1218, 1343
XbaI TCTAGA 1 cut(s) 1207
XceI RCATGY 1 cut(s) 182
XmiI GTMKAC 1 cut(s) 626
XspI CTAG 6 cut(s) 350, 848, 915, 924, 1208, 1268
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.