Rmu_sc0004704.1_g000002

protein FAR1-RELATED SEQUENCE

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004704.1
Physical Location & Seq
Reverse (-)
8111 .. 17306
9196 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004704.1_g000002.1.cds

Sequence Viewer

Length: 2877 bp
atgatcggagaattgtggcgtagcggcggagtgtggaaatcgaaggacgaagtgcaagtaatccgagaattcaatcacaatatccgatattataccatatgtcaaccaacctaccattcaacttgtatggactttcctgtcgctgacatcgaagccaggagaaatcaccaccaagatcgcgtcctacatatagtagtaacaacgagggcggcgaagagcttcttgggattctcgaagggtcgctttgagatcatttcactgtctggatcttatgtaactgaccaagggggaaagactggtgggctcagtatgtgtctctccaatacaaatgggaaaatcattgggggtggagttggtggaccactgaaggctgcaggcggcatggatggatcgtatgaaccttcaatatctgatattggtttggtgtcccaaagttcgataaatggaagtgactgtaatgaaatgcaatataagggagttcggtatgataagttgtctacagaagatcttaaagggcaggagtttaagactgtggaggaagctgagtccttttacaatgcttatgcgaaggccatgggttttgatgttagaagcgactataagagattaagtatgcgcataacagggagagtcacttcattgcgatcagttgaagatcatcatttagcacttgacacatctatgcagagagtgtctgttaagccttgtcatacatatgaatacattgttgatagatcaggaggttttaagaatgtcgggtttattatgaaggacttgtacaacaagttagattcaagacgtcgagaaattttacttgagggtgatgcagaagctgcacttgcatatatgagaggcaaagttgccacagactcgcatttctactgcaagtttagcatagatgaagataacaggttggcaaatatgttttggagagactctaattctctggtggattatacttgttttggagatgtcctggtgtttgatagtacctacaaaaccaatccttatgagaagccgttagtgttgtttgttggttcaaacaatcatttatcgaccacagtttttggttttgcattactcatggatgaaacgattgagacttacacatgggttttggagacctttatatcgtctatgaataacaaaaggcctgttgctgttttgactgatggggatgaagcaatgcgaagggctattgaagtggtactccctggttgtcctcatcgtctgtgtacgtggcacatagcaaagaacgcccggaggcacctgcgtaagaacagtgtcttttctgaatttagacgttgtatgtgggatgaagtcactccagatggttttgaaaaacgctggaatgctatggttaacacacatggtctccacaataaggattgggttaagatgatgtatgaaaagaggcaaatatgggcagaggcatttattagtggccatttttttgcccgtatgagaagcactcagagatgtgagggtatgaacagctatatgaagggttatctgaaaagcggtgtgaaattatttgaacttattccagcacttgatagggcattgttacggcttaggaacaaggttgtggagaggattttaacaaactttgtttatgttctcattttcgtcagaaaaatccaagcggatgagttgattgcttgcggtaagaatgtgaagaaagataatgagtttaagaaattggtggcttctaagtggcatacactcacgcctactgaaaaagccaagtacagtattccaggccctgatgtttcatctggaattacgaagaaaagtaggaatacatccaaatcctcagctaccatatccactcgatgtagtccacgccagtttcaacaagttgtttctaaattttctagggaacaaattgcagcaataactgaattgggcttcggtacattagtgcaattgtcatgcacacgagtacgccgagatttatgtcgatttttgattgataagttcaacactgaggagtgtttgattgagctgcatggtaagagtatgaaaatgagttcttcagattttaaacagattatgagtgtgcctgaaggaggaatagatgtagactttagcggctcaattgaagtccctgacatgaaaccattggttgattattatgtcggaaattctgggtatatagaaatttcagacataattgcaaagttagatggagtaaacgtagtagataatcactttggagtcagcttcattctgttggcattgggaaccttgctttgcccaaatacatcaacacatctcaatccaaagtatcttcttgcattgaagaatctgaagaatataagaagtatgaactgggcaagtttttcatttgaatttctattggaaagtgtgcggttgttcaagcaaaacaaagcaaagtacatatctggatgtgtgttgttcttccaactatattattataatgtcatcggatatggaagggcacttgttgattgtgagacgccttcaattgcagcttggggagtggagcaatcagcaaaattaattaaatggatattgcgtaaagggggtcatgaaagtccaaacattctggtttccaaagtttataattcaagtgaacagaaacatgaggcagaaaatgttgttgcccttcgagctgatgttgaatccgtgaagagtaccattatgcgtgtggaggaaaagattgatgaattgggaggtcttcttagagggatacaagaaggattgttcaaagtagtgagacaagatggtgatcaggatgtcaatataaaaaggaacgaggctaatcatcaaagaaagactgtggatctgtcagcaaatgacactattaggcaaaaccatcaagaaagtgatgatttcaaaactcaaagttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

958

Amino Acids

108.68

Weight (kDa)

8.83

Isoelectric Point (pI)

41.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000268)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23642 FvH4_2g09911 FvH4_2g09911 FvH4_2g09911 FvH4_3g18421 FvH4_4g05321 FvH4_6g28332 FvH4_7g31231
prunus_persica Prupe.2G063700_v2.0.a1 Prupe.5G238300_v2.0.a1 Prupe.6G153700_v2.0.a1 Prupe.7G017400_v2.0.a1 Prupe.7G070100_v2.0.a1 Prupe.7G070100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0345471 RchiOBHm_Chr1g0366901 RchiOBHm_Chr2g0162601 RchiOBHm_Chr6g0266661 RchiOBHm_Chr6g0266671
rosa_laevigata RLG00000005047 RLG00000007971 RLG00000008530 RLG00000009009 RLG00000009046 RLG00000014086 RLG00000017162 RLG00000017163 RLG00000017440 RLG00000019098 RLG00000022623 RLG00000024566 RLG00000027733 RLG00000029878 RLG00000029945 RLG00000030127 RLG00000030157 RLG00000031078 RLG00000031080 RLG00000034338 RLG00000034670
rosa_multiflora Rmu_sc0002106.1_g000007 Rmu_sc0002531.1_g000064 Rmu_sc0003433.1_g000005 Rmu_sc0004704.1_g000001 Rmu_sc0004704.1_g000002 Rmu_sc0004888.1_g000042 Rmu_sc0005599.1_g000031 Rmu_sc0006413.1_g000014 Rmu_sc0006413.1_g000018
rosa_roxburghii Rroxscaffold_1G00031940 Rroxscaffold_1G00032500 Rroxscaffold_1G00074770 Rroxscaffold_1G00074780 Rroxscaffold_1G00075150 Rroxscaffold_2G00125060 Rroxscaffold_2G00125070 Rroxscaffold_2G00125800 Rroxscaffold_2G00125820 Rroxscaffold_2G00139560 Rroxscaffold_2G00140550 Rroxscaffold_4G00314090 Rroxscaffold_6G00390050 Rroxscaffold_6G00390520 Rroxscaffold_6G00390530 Rroxscaffold_6G00428030 Rroxscaffold_7G00201570 Rroxscaffold_7G00201580 Rroxscaffold_7G00207070 Rroxscaffold_7G00207080 Rroxscaffold_7G00207240
rosa_rugosa Rorug01G0408000 Rorug01G0408100 Rorug01G0408100 Rorug01G0408200 Rorug02G0155200 Rorug02G0181500 Rorug02G0288400 Rorug03G0208600 Rorug03G0272300 Rorug06G0005500 Rorug06G0005600 Rorug06G0026300.1 Rorug06G0026400 Rorug06G0026500 Rorug06G0026600 Rorug06G0026600 Rorug06G0026600 Rorug06G0145800 Rorug07G0305200
rosa_samantha Rh1AG062100 Rh1BG131900 Rh1BG157000 Rh1CG021100 Rh1CG321600 Rh1DG188200 Rh2DG388300 Rh3AG320500 Rh3BG355400 Rh3CG352400 Rh3CG353200 Rh4AG045800 Rh4DG171700 Rh5AG196000 Rh5AG196100 Rh5CG346800 Rh6BG147600 Rh6BG147700 Rh6CG143200 Rh6CG143500 Rh6CG174600 Rh6CG391800 Rh6DG132100 Rh6DG132300 Rh6DG167100 Rh6DG167200 Rh7AG211600 Rh7BG307000 Rh7BG307300 Rh7BG398300
rosa_wichuraiana Rw0G001830 Rw0G001840 Rw0G018160 Rw0G018170 Rw3G028040 Rw5G017860 Rw5G026710 Rw6G012630 Rw6G012650 Rw6G012780 Rw6G012800 Rw7G019130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2442, 2589
AarI CACCTGC 1 cut(s) 1278
AasI GACNNNNNNGTC 1 cut(s) 137
AatII GACGTC 1 cut(s) 802
Acc16I TGCGCA 1 cut(s) 617
Acc36I ACCTGC 1 cut(s) 1278
AccB1I GGYRCC 1 cut(s) 1266
AccI GTMKAC 2 cut(s) 497, 2085
AccII CGCG 1 cut(s) 180
AciI CCGC 9 cut(s) 24, 27, 209, 378, 1521, 1646, 1665, 2094, 2374
AclWI GGATC 3 cut(s) 274, 397, 2817
AcoI YGGCCR 1 cut(s) 1444
AcsI RAATTY 7 cut(s) 68, 807, 1295, 1871, 2146, 2163, 2354
AcuI CTGAAG 4 cut(s) 386, 2022, 2088, 2333
AcyI GRCGYC 2 cut(s) 799, 2483
AfaI GTAC 9 cut(s) 779, 991, 1209, 1237, 1751, 1918, 1947, 2402, 2662
AfiI CCNNNNNNNGG 2 cut(s) 1384, 2072
AjnI CCWGG 4 cut(s) 155, 975, 1213, 1759
AjuI GAANNNNNNNTTGG 4 cut(s) 100, 132, 206, 238
AluBI AGCT 9 cut(s) 219, 542, 833, 1497, 1820, 2008, 2226, 2498, 2639
AluI AGCT 9 cut(s) 219, 542, 833, 1497, 1820, 2008, 2226, 2498, 2639
Alw26I GTCTC 7 cut(s) 320, 927, 1094, 1115, 1379, 2474, 2737
AlwI GGATC 3 cut(s) 274, 397, 2817
AlwNI CAGNNNCTG 2 cut(s) 833, 1766
AoxI GGCC 4 cut(s) 570, 1151, 1444, 1762
ApeKI GCWGC 5 cut(s) 371, 833, 1892, 2008, 2495
ApoI RAATTY 7 cut(s) 68, 807, 1295, 1871, 2146, 2163, 2354
AseI ATTAAT 1 cut(s) 2525
Asp700I GAANNNNTTC 2 cut(s) 218, 1542
AspLEI GCGC 1 cut(s) 618
AspS9I GGNCC 2 cut(s) 359, 1763
AsuC2I CCSGG 1 cut(s) 1261
AsuHPI GGTGA 3 cut(s) 158, 833, 2765
AvaII GGWCC 1 cut(s) 359
BaeGI GKGCMC 1 cut(s) 2467
BaeI ACNNNNGTAYC 2 cut(s) 1908, 1941
BalI TGGCCA 1 cut(s) 1446
BanI GGYRCC 1 cut(s) 1266
BanII GRGCYC 1 cut(s) 306
BarI GAAGNNNNNNTAC 2 cut(s) 761, 793
BauI CACGAG 1 cut(s) 1941
BbsI GAAGAC 1 cut(s) 2696
BbvCI CCTCAGC 1 cut(s) 1816
BbvI GCAGC 5 cut(s) 358, 820, 1904, 1995, 2507
BccI CCATC 6 cut(s) 380, 1166, 1325, 2183, 2744, 2850
BceAI ACGGC 2 cut(s) 1003, 1586
BciT130I CCWGG 4 cut(s) 157, 977, 1215, 1761
BciVI GTATCC 1 cut(s) 2709
BclI TGATCA 1 cut(s) 2755
BcnI CCSGG 1 cut(s) 1261
BcoDI GTCTC 7 cut(s) 320, 927, 1094, 1115, 1379, 2474, 2737
BfaI CTAG 1 cut(s) 1878
BfmI CTRYAG 2 cut(s) 372, 498
BfuAI ACCTGC 1 cut(s) 1278
BfuI GTATCC 1 cut(s) 2709
BglII AGATCT 1 cut(s) 505
BisI GCNGC 9 cut(s) 25, 210, 372, 379, 834, 1893, 2009, 2095, 2496
BlsI GCNGC 9 cut(s) 26, 211, 373, 380, 835, 1894, 2010, 2096, 2497
Bme1390I CCNGG 5 cut(s) 157, 977, 1215, 1261, 1761
Bme18I GGWCC 1 cut(s) 359
BmgT120I GGNCC 2 cut(s) 359, 1763
BmiI GGNNCC 2 cut(s) 1268, 2248
BmrFI CCNGG 5 cut(s) 157, 977, 1215, 1261, 1761
BmrI ACTGGG 1 cut(s) 2344
BmsI GCATC 1 cut(s) 814
BmuI ACTGGG 1 cut(s) 2344
BpiI GAAGAC 1 cut(s) 2696
BplI GAGNNNNNCTC 2 cut(s) 1456, 1488
BpmI CTGGAG 1 cut(s) 1311
Bpu10I CCTNAGC 2 cut(s) 1574, 1816
BpuEI CTTGAG 1 cut(s) 836
BpuMI CCSGG 1 cut(s) 1261
BsaAI YACGTR 1 cut(s) 1239
BsaBI GATNNNNATC 1 cut(s) 2754
BsaHI GRCGYC 2 cut(s) 799, 2483
BsaI GGTCTC 2 cut(s) 1115, 1379
BsaJI CCNNGG 3 cut(s) 283, 573, 1213
BsaXI ACNNNNNCTCC 4 cut(s) 1359, 1389, 2184, 2214
Bsc4I CCNNNNNNNGG 2 cut(s) 1384, 2072
Bse1I ACTGG 3 cut(s) 301, 1849, 2339
Bse3DI GCAATG 2 cut(s) 638, 1191
Bse8I GATNNNNATC 1 cut(s) 2754
BseBI CCWGG 4 cut(s) 157, 977, 1215, 1761
BseDI CCNNGG 3 cut(s) 283, 573, 1213
BseGI GGATG 8 cut(s) 391, 1093, 1183, 1321, 1654, 1805, 2417, 2767
BseJI GATNNNNATC 1 cut(s) 2754
BseLI CCNNNNNNNGG 2 cut(s) 1384, 2072
BseMI GCAATG 2 cut(s) 638, 1191
BseMII CTCAG 5 cut(s) 319, 534, 1487, 1830, 1980
BseNI ACTGG 3 cut(s) 301, 1849, 2339
BseRI GAGGAG 1 cut(s) 2006
BseSI GKGCMC 1 cut(s) 2467
BseXI GCAGC 5 cut(s) 358, 820, 1904, 1995, 2507
BsgI GTGCAG 1 cut(s) 819
Bsh1236I CGCG 1 cut(s) 180
BshFI GGCC 4 cut(s) 572, 1153, 1446, 1764
BshNI GGYRCC 1 cut(s) 1266
BsiSI CCGG 1 cut(s) 1261
BslFI GGGAC 2 cut(s) 412, 2093
BslI CCNNNNNNNGG 2 cut(s) 1384, 2072
BsmAI GTCTC 7 cut(s) 320, 927, 1094, 1115, 1379, 2474, 2737
BsmBI CGTCTC 1 cut(s) 2474
BsmFI GGGAC 2 cut(s) 412, 2093
BsmI GAATGC 1 cut(s) 1357
BsnI GGCC 4 cut(s) 572, 1153, 1446, 1764
Bso31I GGTCTC 2 cut(s) 1115, 1379
Bsp1286I GDGCHC 2 cut(s) 306, 2467
Bsp1407I TGTACA 1 cut(s) 777
Bsp19I CCATGG 1 cut(s) 573
BspACI CCGC 9 cut(s) 24, 27, 209, 378, 1521, 1646, 1665, 2094, 2374
BspANI GGCC 4 cut(s) 572, 1153, 1446, 1764
BspCNI CTCAG 5 cut(s) 318, 535, 1486, 1829, 1981
BspFNI CGCG 1 cut(s) 180
BspHI TCATGA 1 cut(s) 2554
BspLI GGNNCC 2 cut(s) 1268, 2248
BspMAI CTGCAG 1 cut(s) 376
BspMI ACCTGC 1 cut(s) 1278
BspPI GGATC 3 cut(s) 274, 397, 2817
BspQI GCTCTTC 1 cut(s) 209
BspT107I GGYRCC 1 cut(s) 1266
BspTNI GGTCTC 2 cut(s) 1115, 1379
BsrDI GCAATG 2 cut(s) 638, 1191
BsrGI TGTACA 1 cut(s) 777
BsrI ACTGG 3 cut(s) 301, 1849, 2339
BssECI CCNNGG 3 cut(s) 283, 573, 1213
BssNI GRCGYC 2 cut(s) 799, 2483
BssSI CACGAG 1 cut(s) 1941
BssT1I CCWWGG 2 cut(s) 283, 573
Bst2BI CACGAG 1 cut(s) 1941
Bst2UI CCWGG 4 cut(s) 157, 977, 1215, 1761
Bst4CI ACNGT 7 cut(s) 261, 455, 532, 1063, 1283, 1754, 2806
Bst6I CTCTTC 2 cut(s) 209, 2651
BstACI GRCGYC 2 cut(s) 799, 2483
BstAPI GCANNNNNTGC 1 cut(s) 833
BstAUI TGTACA 1 cut(s) 777
BstBAI YACGTR 1 cut(s) 1239
BstC8I GCNNGC 2 cut(s) 376, 1663
BstDEI CTNAG 8 cut(s) 305, 543, 1473, 1574, 1713, 1816, 1989, 2708
BstDSI CCRYGG 1 cut(s) 573
BstENI CCTNNNNNAGG 1 cut(s) 2070
BstF5I GGATG 8 cut(s) 391, 1093, 1183, 1321, 1654, 1805, 2417, 2767
BstFNI CGCG 1 cut(s) 180
BstHHI GCGC 1 cut(s) 618
BstMAI GTCTC 7 cut(s) 320, 927, 1094, 1115, 1379, 2474, 2737
BstMWI GCNNNNNNNGC 5 cut(s) 833, 839, 891, 1256, 2636
BstNI CCWGG 4 cut(s) 157, 977, 1215, 1761
BstSCI CCNGG 5 cut(s) 155, 975, 1213, 1259, 1759
BstSFI CTRYAG 2 cut(s) 372, 498
BstSLI GKGCMC 1 cut(s) 2467
BstUI CGCG 1 cut(s) 180
BstV1I GCAGC 5 cut(s) 358, 820, 1904, 1995, 2507
BstV2I GAAGAC 1 cut(s) 2696
BstX2I RGATCY 3 cut(s) 266, 505, 2809
BstYI RGATCY 3 cut(s) 266, 505, 2809
BsuI GTATCC 1 cut(s) 2709
BsuRI GGCC 4 cut(s) 572, 1153, 1446, 1764
BtgI CCRYGG 1 cut(s) 573
BtsCI GGATG 8 cut(s) 391, 1093, 1183, 1321, 1654, 1805, 2417, 2767
BtsIMutI CAGTG 4 cut(s) 257, 362, 1288, 1986
BveI ACCTGC 1 cut(s) 1278
Cac8I GCNNGC 2 cut(s) 376, 1663
CaiI CAGNNNCTG 2 cut(s) 833, 1766
CciI TCATGA 1 cut(s) 2554
CfoI GCGC 1 cut(s) 618
Cfr13I GGNCC 2 cut(s) 359, 1763
CseI GACGC 2 cut(s) 169, 2491
Csp6I GTAC 9 cut(s) 778, 990, 1208, 1236, 1750, 1917, 1946, 2401, 2661
CspCI CAANNNNNGTGG 2 cut(s) 1048, 1083
CviQI GTAC 9 cut(s) 778, 990, 1208, 1236, 1750, 1917, 1946, 2401, 2661
DdeI CTNAG 8 cut(s) 305, 543, 1473, 1574, 1713, 1816, 1989, 2708
DraI TTTAAA 1 cut(s) 2047
DrdI GACNNNNNNGTC 1 cut(s) 137
DseDI GACNNNNNNGTC 1 cut(s) 137
EaeI YGGCCR 1 cut(s) 1444
Eam1104I CTCTTC 2 cut(s) 209, 2651
EarI CTCTTC 2 cut(s) 209, 2651
EciI GGCGGA 1 cut(s) 42
Eco130I CCWWGG 2 cut(s) 283, 573
Eco147I AGGCCT 1 cut(s) 1153
Eco24I GRGCYC 1 cut(s) 306
Eco31I GGTCTC 2 cut(s) 1115, 1379
Eco47I GGWCC 1 cut(s) 359
Eco57I CTGAAG 4 cut(s) 386, 2022, 2088, 2333
EcoNI CCTNNNNNAGG 1 cut(s) 2070
EcoO109I RGGNCCY 1 cut(s) 1763
EcoRI GAATTC 1 cut(s) 68
EcoRII CCWGG 4 cut(s) 155, 975, 1213, 1759
EcoT14I CCWWGG 2 cut(s) 283, 573
EcoT38I GRGCYC 1 cut(s) 306
ErhI CCWWGG 2 cut(s) 283, 573
Esp3I CGTCTC 1 cut(s) 2474
FalI AAGNNNNNCTT 6 cut(s) 206, 238, 227, 259, 822, 854
FaqI GGGAC 2 cut(s) 412, 2093
FauNDI CATATG 2 cut(s) 98, 715
FbaI TGATCA 1 cut(s) 2755
FblI GTMKAC 2 cut(s) 497, 2085
Fnu4HI GCNGC 9 cut(s) 25, 210, 372, 379, 834, 1893, 2009, 2095, 2496
FokI GGATG 8 cut(s) 398, 1100, 1190, 1328, 1661, 1792, 2424, 2774
FriOI GRGCYC 1 cut(s) 306
Fsp4HI GCNGC 9 cut(s) 25, 210, 372, 379, 834, 1893, 2009, 2095, 2496
FspAI RTGCGCAY 1 cut(s) 617
FspBI CTAG 1 cut(s) 1878
FspI TGCGCA 1 cut(s) 617
GlaI GCGC 1 cut(s) 617
GluI GCNGC 9 cut(s) 25, 210, 372, 379, 834, 1893, 2009, 2095, 2496
GsuI CTGGAG 1 cut(s) 1311
HaeIII GGCC 4 cut(s) 572, 1153, 1446, 1764
HapII CCGG 1 cut(s) 1261
HgaI GACGC 2 cut(s) 169, 2491
HhaI GCGC 1 cut(s) 618
Hin1I GRCGYC 2 cut(s) 799, 2483
Hin6I GCGC 1 cut(s) 616
HinP1I GCGC 1 cut(s) 616
HincII GTYRAC 2 cut(s) 104, 1363
HindII GTYRAC 2 cut(s) 104, 1363
HinfI GANTC 9 cut(s) 228, 545, 630, 791, 869, 935, 2220, 2308, 2648
HpaI GTTAAC 1 cut(s) 1363
HpaII CCGG 1 cut(s) 1261
HphI GGTGA 3 cut(s) 158, 833, 2765
Hpy166II GTNNAC 9 cut(s) 104, 359, 498, 1236, 1363, 1844, 2086, 2197, 2600
Hpy8I GTNNAC 9 cut(s) 104, 359, 498, 1236, 1363, 1844, 2086, 2197, 2600
Hpy99I CGWCG 1 cut(s) 804
HpyCH4III ACNGT 7 cut(s) 261, 455, 532, 1063, 1283, 1754, 2806
HpyCH4IV ACGT 4 cut(s) 799, 1238, 1303, 2199
HpyF10VI GCNNNNNNNGC 5 cut(s) 833, 839, 891, 1256, 2636
HpyF3I CTNAG 8 cut(s) 305, 543, 1473, 1574, 1713, 1816, 1989, 2708
HpySE526I ACGT 4 cut(s) 799, 1238, 1303, 2199
Hsp92I GRCGYC 2 cut(s) 799, 2483
HspAI GCGC 1 cut(s) 616
Ksp22I TGATCA 1 cut(s) 2755
KspAI GTTAAC 1 cut(s) 1363
LguI GCTCTTC 1 cut(s) 209
LmnI GCTCC 1 cut(s) 2509
Lsp1109I GCAGC 5 cut(s) 358, 820, 1904, 1995, 2507
LweI GCATC 1 cut(s) 814
MaeI CTAG 1 cut(s) 1878
MaeII ACGT 4 cut(s) 799, 1238, 1303, 2199
MaeIII GTNAC 6 cut(s) 196, 274, 449, 631, 1321, 1566
MfeI CAATTG 3 cut(s) 1928, 2100, 2490
MflI RGATCY 3 cut(s) 266, 505, 2809
MhlI GDGCHC 2 cut(s) 306, 2467
MlsI TGGCCA 1 cut(s) 1446
MluNI TGGCCA 1 cut(s) 1446
MlyI GAGTC 5 cut(s) 554, 639, 863, 929, 2229
MmeI TCCRAC 2 cut(s) 2122, 2452
Mox20I TGGCCA 1 cut(s) 1446
MroXI GAANNNNTTC 2 cut(s) 218, 1542
MscI TGGCCA 1 cut(s) 1446
MslI CAYNNNNRTG 2 cut(s) 680, 714
Msp20I TGGCCA 1 cut(s) 1446
MspI CCGG 1 cut(s) 1261
MspR9I CCNGG 5 cut(s) 157, 977, 1215, 1261, 1761
MunI CAATTG 3 cut(s) 1928, 2100, 2490
Mva1269I GAATGC 1 cut(s) 1357
MvaI CCWGG 4 cut(s) 157, 977, 1215, 1761
MvnI CGCG 1 cut(s) 180
MwoI GCNNNNNNNGC 5 cut(s) 833, 839, 891, 1256, 2636
NciI CCSGG 1 cut(s) 1261
NcoI CCATGG 1 cut(s) 573
NdeI CATATG 2 cut(s) 98, 715
NlaIV GGNNCC 2 cut(s) 1268, 2248
NmeAIII GCCGAG 1 cut(s) 1976
NmuCI GTSAC 3 cut(s) 449, 631, 1321
NsbI TGCGCA 1 cut(s) 617
PacI TTAATTAA 1 cut(s) 2529
PagI TCATGA 1 cut(s) 2554
PaqCI CACCTGC 1 cut(s) 1278
PceI AGGCCT 1 cut(s) 1153
PciSI GCTCTTC 1 cut(s) 209
PcsI WCGNNNNNNNCGW 3 cut(s) 147, 209, 1948
PctI GAATGC 1 cut(s) 1357
PdmI GAANNNNTTC 2 cut(s) 218, 1542
PfeI GAWTC 4 cut(s) 228, 791, 2308, 2648
PkrI GCNGC 9 cut(s) 26, 211, 373, 380, 835, 1894, 2010, 2096, 2497
PleI GAGTC 5 cut(s) 553, 638, 863, 929, 2228
PpsI GAGTC 5 cut(s) 553, 638, 863, 929, 2228
Ppu21I YACGTR 1 cut(s) 1239
PshBI ATTAAT 1 cut(s) 2525
PsiI TTATAA 2 cut(s) 2442, 2589
Psp6I CCWGG 4 cut(s) 155, 975, 1213, 1759
PspGI CCWGG 4 cut(s) 155, 975, 1213, 1759
PspN4I GGNNCC 2 cut(s) 1268, 2248
PspPI GGNCC 2 cut(s) 359, 1763
PstI CTGCAG 1 cut(s) 376
PstNI CAGNNNCTG 2 cut(s) 833, 1766
PsuI RGATCY 3 cut(s) 266, 505, 2809
RsaI GTAC 9 cut(s) 779, 991, 1209, 1237, 1751, 1918, 1947, 2402, 2662
RsaNI GTAC 9 cut(s) 778, 990, 1208, 1236, 1750, 1917, 1946, 2401, 2661
RseI CAYNNNNRTG 2 cut(s) 680, 714
SapI GCTCTTC 1 cut(s) 209
SatI GCNGC 9 cut(s) 25, 210, 372, 379, 834, 1893, 2009, 2095, 2496
Sau96I GGNCC 2 cut(s) 359, 1763
SchI GAGTC 5 cut(s) 554, 639, 863, 929, 2229
ScrFI CCNGG 5 cut(s) 157, 977, 1215, 1261, 1761
SduI GDGCHC 2 cut(s) 306, 2467
SfaNI GCATC 1 cut(s) 814
SfcI CTRYAG 2 cut(s) 372, 498
SinI GGWCC 1 cut(s) 359
SmiMI CAYNNNNRTG 2 cut(s) 680, 714
SmlI CTYRAG 1 cut(s) 815
SmoI CTYRAG 1 cut(s) 815
SseBI AGGCCT 1 cut(s) 1153
SsiI CCGC 9 cut(s) 24, 27, 209, 378, 1521, 1646, 1665, 2094, 2374
SspMI CTAG 1 cut(s) 1878
StuI AGGCCT 1 cut(s) 1153
StyD4I CCNGG 5 cut(s) 155, 975, 1213, 1259, 1759
StyI CCWWGG 2 cut(s) 283, 573
TaaI ACNGT 7 cut(s) 261, 455, 532, 1063, 1283, 1754, 2806
TaiI ACGT 4 cut(s) 802, 1241, 1306, 2202
TaqI TCGA 9 cut(s) 41, 150, 233, 437, 802, 1055, 1834, 1963, 2635
TatI WGTACW 3 cut(s) 777, 1749, 2400
TauI GCSGC 4 cut(s) 27, 212, 381, 2097
TfiI GAWTC 4 cut(s) 228, 791, 2308, 2648
TscAI CASTG 4 cut(s) 264, 369, 1288, 1993
TseFI GTSAC 3 cut(s) 449, 631, 1321
TseI GCWGC 5 cut(s) 371, 833, 1892, 2008, 2495
Tsp45I GTSAC 3 cut(s) 449, 631, 1321
TspGWI ACGGA 1 cut(s) 2641
TspRI CASTG 4 cut(s) 264, 369, 1288, 1993
VpaK11BI GGWCC 1 cut(s) 359
VspI ATTAAT 1 cut(s) 2525
XagI CCTNNNNNAGG 1 cut(s) 2070
XapI RAATTY 7 cut(s) 68, 807, 1295, 1871, 2146, 2163, 2354
XcmI CCANNNNNNNNNTGG 1 cut(s) 2671
XmiI GTMKAC 2 cut(s) 497, 2085
XmnI GAANNNNTTC 2 cut(s) 218, 1542
XspI CTAG 1 cut(s) 1878
ZraI GACGTC 1 cut(s) 800
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.