RLG00000014086

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000268
Physical Location & Seq
Reverse (-)
46868523 .. 46877476
8954 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014086

Sequence Viewer

Length: 2664 bp
ATGTTCAAAACCATCGATATCCAAGTGTCATCATATCCAACGGTGAGAAAGAAGAAAAAGGGTTTGGTTACAAATGGCTGGATTGATCGTAGAGGAGCATTGGAGGTTGACATGGATGAGTTGATGAATATCGGTGGCCTCAAGGACAGAGGAAAAAGACCTAGGAAGTACATTGAGAAGAAACAACCTGGCAAACTCAGTTTTTTTAATTTTTTGACAATTAAATCTCAAGAGATGAAGGAGAAAAACATTAAGGTGGATGTTATGGTTAGGAGACGGCTGGCTAATATATGGAGGTCTATGAAACCTGAAGAGAAGGCAAAGTATGCTGGGTCATATCCATGTGTTAAAGTTGGTTGTAGGGAATTCAAACATGATTTTTGTGGATTGAAACCTATAATCACCCAATGTCGTCCAGATGTTTTTAAAGATGTCGTTTCAACATTTTCTGATGAAAGAAAAGCTGCAGTAGAAGAAATGGGTTTTGGGTTACTATTGCAGCTTCGCTGTGACCAATTGCAGTGCGCCTTGTGTGGTTGGTTGGTTGATAGATTTGATCCTGTTGCATCTTCAATTGAGGTACATGGTAAGACATTCAACCTTAAAGCATCTGACTTTGAGAATATAATGGGGGTCAAAGATGGAGGACATGATGTTGAGCTAAGTGACTCAGAGGATAACAACATACACGGACTAAAGATTATCCGTTGTGGAAAAGATAGAAGTCAAATAAGTATGAGAGAAATAGCTAAGAGGTTGAGACAGACAAATATCGTCGATGACACCTTTAGAGTTGGGTTCGTGTTATTTTTGCTGGGCACCTTGCTCTGTCCTTCTTCAATTATATTGGCTTCAAAGTACCTGCAACCATTAAGGGAAACCCGTGATATAAAACTCAAAAATTGGGCGACATTCTCATTCAAATATCTAGTTGAAGGTGTTAGTTCCTTTAAGAATAGAAAACGATCCTGTGTGATCAATGGATGTGTACTATTCTTGCAGCTCTTTTATTTTGATCTCATTGTTCAGGGAAGAATGTTTGTAAATAGGTCGTTAGCACCCATTGTTGCATGGGGAGATAAGGAGGCAAATGAATTAATTAAGTGGATCAGGACTCACAAAGGGGGTTTTGAAAGTGTGGACATTACTGTTGTTTCTGACCGAACAGCCTTGATCAGCAAGGAAGATGAGGCGGCCCTGAAGAATGGTCTTGGGAGTGTACACATAAAGGTTACTGCAAATGAACGGATGCAGCGACAGACAAATGATGAAATGAAAGTGGCTGAATTGGAAGCTAAACTTGACAGTGAGATGAGCAAAATTGAATGCCTTACTTACTGGCAAGTCTTTCAAGCTACTAACATTTTGGCTACCAGATTTGACCTGCTGAGCGTGTTTCTTCCCATGTCCCAGGAAAGGAAGAAGGATTATGTTTTATATCTGTTAGAGCATGGCACCCATGGCTTGCTGGACTCTCCAGTCTTGGAAACTCGATACACAGCGCGCAGATCACAAACATTTGGAGGGGATTACTTGCTGAAATACTGGAAATTTTCATTTATATGCGGTTCAGTTGGGCTCCAGTGTGAGCACCTGCAGCTTGGTTTGTGTGGTTGGTTGATTGATAGATTTGATCCCAGCAAGTCTTCCATTGAGGTACATGGCAAGAGATTCAATCTTGGTCCTACCGACTTTGAGAACATAATGGGGGTCAATGATGGAGGACATGATGTTGAAATCCGTGGCTCAAAGGCTGACATACAAGAATTAAAGGATATCCACTTTGGCAACAGATATCGAATATGCAATATGAGTGAAATAGCTGAGAAGTTGAAAGAGACGAATAATGTAGATGACACCTTTAGAGTTGGGTTTGTTCTATTTGCATTGGCCACCTTTCTTTGTCCATCTAGTTCAGGTGATTTGACAGCAAAGTATCTGCATCCACTAAGGGACATCAATGGTATAAAATTCAAAAATTGGGCGACTTTTTCATTCAGTTTTCTTGTTGAAAGCCTTAGTACATTTAAGAAGAAAAATACAACTTCTATCGGTGGGTGTGTACTATTCTTGAAGCTGTTTTACTTTGATCTCGTCGTTCATGGAAGAACATTTGTAAATAGATCATTGACACCTATTGTTGCATGGGGGGAAAAGGAGGAAACAAAGTTAGTGGAGTGGATCGGACAAAATGGGGGGTTTAATAGTTTGGACATTGCTATTGCTTATGATCATATAGCCTCAATCCCAATCAGTGCTGATGAAGATGAGGTGGTGGCTGTGAGGAATGATCACACAGAGGTTGCAACAGTTGAACCACAGTCACAACAAAAGACAAATGACATTACTCTTGTTTACAAGCGTAGAGCCTCTGCTAGTTTTGAGAACAGTGTGGTGGCCTTAAGGAATGATCTCGCAATGTTACACAAAAAGGTTACCAAATTTAAACGAGCACTACGGCAAAAGAAAAATGATGATAAGGCAGCTGAACTGGAAGTTAAACTTGGTAGTGAGATGAGCAAGATTGAAGGCCTTACTTATTGGCAGGGAAAAAAGAAAAAGAAAGACAGACACTTTGCGAAACTCTTGCCATTGATCAAGAGTCATATTGATTTTTGCCAACCAGAAGGATTCAAATCTCTAGCCAAGTCATTTGGGACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

888

Amino Acids

101.03

Weight (kDa)

9.13

Isoelectric Point (pI)

37.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000268)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23642 FvH4_2g09911 FvH4_2g09911 FvH4_2g09911 FvH4_3g18421 FvH4_4g05321 FvH4_6g28332 FvH4_7g31231
prunus_persica Prupe.2G063700_v2.0.a1 Prupe.5G238300_v2.0.a1 Prupe.6G153700_v2.0.a1 Prupe.7G017400_v2.0.a1 Prupe.7G070100_v2.0.a1 Prupe.7G070100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0345471 RchiOBHm_Chr1g0366901 RchiOBHm_Chr2g0162601 RchiOBHm_Chr6g0266661 RchiOBHm_Chr6g0266671
rosa_laevigata RLG00000005047 RLG00000007971 RLG00000008530 RLG00000009009 RLG00000009046 RLG00000014086 RLG00000017162 RLG00000017163 RLG00000017440 RLG00000019098 RLG00000022623 RLG00000024566 RLG00000027733 RLG00000029878 RLG00000029945 RLG00000030127 RLG00000030157 RLG00000031078 RLG00000031080 RLG00000034338 RLG00000034670
rosa_multiflora Rmu_sc0002106.1_g000007 Rmu_sc0002531.1_g000064 Rmu_sc0003433.1_g000005 Rmu_sc0004704.1_g000001 Rmu_sc0004704.1_g000002 Rmu_sc0004888.1_g000042 Rmu_sc0005599.1_g000031 Rmu_sc0006413.1_g000014 Rmu_sc0006413.1_g000018
rosa_roxburghii Rroxscaffold_1G00031940 Rroxscaffold_1G00032500 Rroxscaffold_1G00074770 Rroxscaffold_1G00074780 Rroxscaffold_1G00075150 Rroxscaffold_2G00125060 Rroxscaffold_2G00125070 Rroxscaffold_2G00125800 Rroxscaffold_2G00125820 Rroxscaffold_2G00139560 Rroxscaffold_2G00140550 Rroxscaffold_4G00314090 Rroxscaffold_6G00390050 Rroxscaffold_6G00390520 Rroxscaffold_6G00390530 Rroxscaffold_6G00428030 Rroxscaffold_7G00201570 Rroxscaffold_7G00201580 Rroxscaffold_7G00207070 Rroxscaffold_7G00207080 Rroxscaffold_7G00207240
rosa_rugosa Rorug01G0408000 Rorug01G0408100 Rorug01G0408100 Rorug01G0408200 Rorug02G0155200 Rorug02G0181500 Rorug02G0288400 Rorug03G0208600 Rorug03G0272300 Rorug06G0005500 Rorug06G0005600 Rorug06G0026300.1 Rorug06G0026400 Rorug06G0026500 Rorug06G0026600 Rorug06G0026600 Rorug06G0026600 Rorug06G0145800 Rorug07G0305200
rosa_samantha Rh1AG062100 Rh1BG131900 Rh1BG157000 Rh1CG021100 Rh1CG321600 Rh1DG188200 Rh2DG388300 Rh3AG320500 Rh3BG355400 Rh3CG352400 Rh3CG353200 Rh4AG045800 Rh4DG171700 Rh5AG196000 Rh5AG196100 Rh5CG346800 Rh6BG147600 Rh6BG147700 Rh6CG143200 Rh6CG143500 Rh6CG174600 Rh6CG391800 Rh6DG132100 Rh6DG132300 Rh6DG167100 Rh6DG167200 Rh7AG211600 Rh7BG307000 Rh7BG307300 Rh7BG398300
rosa_wichuraiana Rw0G001830 Rw0G001840 Rw0G018160 Rw0G018170 Rw3G028040 Rw5G017860 Rw5G026710 Rw6G012630 Rw6G012650 Rw6G012780 Rw6G012800 Rw7G019130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1602
AasI GACNNNNNNGTC 1 cut(s) 1478
Acc36I ACCTGC 3 cut(s) 870, 1392, 1602
AccB1I GGYRCC 2 cut(s) 818, 1454
AccII CGCG 1 cut(s) 1504
AciI CCGC 2 cut(s) 1193, 1566
AclWI GGATC 5 cut(s) 551, 960, 1115, 1628, 2189
AcoI YGGCCR 1 cut(s) 1890
AcsI RAATTY 4 cut(s) 365, 1550, 1970, 2441
AcuI CTGAAG 2 cut(s) 330, 1220
AfaI GTAC 8 cut(s) 170, 582, 860, 990, 1221, 1659, 2023, 2064
AfiI CCNNNNNNNGG 1 cut(s) 1416
AflII CTTAAG 1 cut(s) 2401
AjnI CCWGG 2 cut(s) 187, 1410
AjuI GAANNNNNNNTTGG 6 cut(s) 47, 79, 468, 500, 2487, 2519
Alw21I GWGCWC 2 cut(s) 1593, 2455
Alw26I GTCTC 3 cut(s) 268, 754, 1832
AlwI GGATC 5 cut(s) 551, 960, 1115, 1628, 2189
AoxI GGCC 5 cut(s) 136, 1194, 1890, 2397, 2530
ApeKI GCWGC 6 cut(s) 464, 499, 1000, 1252, 1597, 2483
ApoI RAATTY 4 cut(s) 365, 1550, 1970, 2441
ArsI GACNNNNNNTTYG 2 cut(s) 2558, 2590
AseI ATTAAT 1 cut(s) 1097
AspA2I CCTAGG 1 cut(s) 161
AspLEI GCGC 3 cut(s) 527, 1504, 1506
AspS9I GGNCC 2 cut(s) 1195, 1682
AsuHPI GGTGA 3 cut(s) 55, 394, 1931
AvaII GGWCC 1 cut(s) 1682
AvrII CCTAGG 1 cut(s) 161
BaeGI GKGCMC 1 cut(s) 821
BalI TGGCCA 1 cut(s) 1892
BanI GGYRCC 2 cut(s) 818, 1454
BanII GRGCYC 1 cut(s) 1581
BarI GAAGNNNNNNTAC 2 cut(s) 2066, 2098
BbsI GAAGAC 1 cut(s) 1638
Bbv12I GWGCWC 2 cut(s) 1593, 2455
BbvI GCAGC 6 cut(s) 451, 511, 1012, 1264, 1609, 2495
BccI CCATC 4 cut(s) 20, 635, 1712, 1915
BceAI ACGGC 2 cut(s) 293, 2474
BcgI CGANNNNNNTGC 2 cut(s) 2569, 2603
BciT130I CCWGG 2 cut(s) 189, 1412
BclI TGATCA 5 cut(s) 975, 1173, 2230, 2290, 2595
BcoDI GTCTC 3 cut(s) 268, 754, 1832
BfaI CTAG 5 cut(s) 162, 929, 1911, 2376, 2642
BfmI CTRYAG 2 cut(s) 465, 1595
BfrI CTTAAG 1 cut(s) 2401
BfuAI ACCTGC 3 cut(s) 870, 1392, 1602
BisI GCNGC 7 cut(s) 465, 500, 1001, 1194, 1253, 1598, 2484
BlnI CCTAGG 1 cut(s) 161
BlpI GCTNAGC 1 cut(s) 1388
BlsI GCNGC 7 cut(s) 466, 501, 1002, 1195, 1254, 1599, 2485
Bme1390I CCNGG 2 cut(s) 189, 1412
Bme18I GGWCC 1 cut(s) 1682
BmgT120I GGNCC 2 cut(s) 1195, 1682
BmiI GGNNCC 3 cut(s) 820, 1456, 1580
BmrFI CCNGG 2 cut(s) 189, 1412
BmsI GCATC 4 cut(s) 575, 617, 1239, 1951
BpiI GAAGAC 1 cut(s) 1638
BpmI CTGGAG 2 cut(s) 1461, 1565
Bpu1102I GCTNAGC 1 cut(s) 1388
BpuEI CTTGAG 2 cut(s) 125, 213
Bsa29I ATCGAT 1 cut(s) 15
BsaBI GATNNNNATC 2 cut(s) 128, 2635
BsaJI CCNNGG 4 cut(s) 161, 1410, 1459, 1741
Bsc4I CCNNNNNNNGG 1 cut(s) 1416
Bse1I ACTGG 5 cut(s) 1343, 1478, 1550, 1582, 2496
Bse3DI GCAATG 2 cut(s) 2214, 2424
Bse8I GATNNNNATC 2 cut(s) 128, 2635
BseBI CCWGG 2 cut(s) 189, 1412
BseCI ATCGAT 1 cut(s) 15
BseDI CCNNGG 4 cut(s) 161, 1410, 1459, 1741
BseGI GGATG 5 cut(s) 121, 265, 989, 1254, 1942
BseJI GATNNNNATC 2 cut(s) 128, 2635
BseLI CCNNNNNNNGG 1 cut(s) 1416
BseMI GCAATG 2 cut(s) 2214, 2424
BseMII CTCAG 4 cut(s) 211, 684, 1379, 1815
BseNI ACTGG 5 cut(s) 1343, 1478, 1550, 1582, 2496
BsePI GCGCGC 1 cut(s) 1502
BseRI GAGGAG 1 cut(s) 108
BseSI GKGCMC 1 cut(s) 821
BseXI GCAGC 6 cut(s) 451, 511, 1012, 1264, 1609, 2495
BseYI CCCAGC 3 cut(s) 329, 814, 1637
Bsh1236I CGCG 1 cut(s) 1504
BshFI GGCC 5 cut(s) 138, 1196, 1892, 2399, 2532
BshNI GGYRCC 2 cut(s) 818, 1454
BshVI ATCGAT 1 cut(s) 15
BsiHKAI GWGCWC 2 cut(s) 1593, 2455
BslFI GGGAC 2 cut(s) 1393, 1967
BslI CCNNNNNNNGG 1 cut(s) 1416
BsmAI GTCTC 3 cut(s) 268, 754, 1832
BsmBI CGTCTC 2 cut(s) 268, 1832
BsmFI GGGAC 2 cut(s) 1393, 1967
BsmI GAATGC 1 cut(s) 1331
BsnI GGCC 5 cut(s) 138, 1196, 1892, 2399, 2532
Bsp1286I GDGCHC 4 cut(s) 821, 1581, 1593, 2455
Bsp1407I TGTACA 1 cut(s) 1219
Bsp1720I GCTNAGC 1 cut(s) 1388
Bsp19I CCATGG 1 cut(s) 1459
BspACI CCGC 2 cut(s) 1193, 1566
BspANI GGCC 5 cut(s) 138, 1196, 1892, 2399, 2532
BspCNI CTCAG 4 cut(s) 210, 683, 1380, 1816
BspDI ATCGAT 1 cut(s) 15
BspFNI CGCG 1 cut(s) 1504
BspLI GGNNCC 3 cut(s) 820, 1456, 1580
BspMAI CTGCAG 2 cut(s) 469, 1599
BspMI ACCTGC 3 cut(s) 870, 1392, 1602
BspPI GGATC 5 cut(s) 551, 960, 1115, 1628, 2189
BspT107I GGYRCC 2 cut(s) 818, 1454
BspTI CTTAAG 1 cut(s) 2401
BsrDI GCAATG 2 cut(s) 2214, 2424
BsrGI TGTACA 1 cut(s) 1219
BsrI ACTGG 5 cut(s) 1343, 1478, 1550, 1582, 2496
BssECI CCNNGG 4 cut(s) 161, 1410, 1459, 1741
BssHII GCGCGC 1 cut(s) 1502
BssT1I CCWWGG 2 cut(s) 161, 1459
Bst2UI CCWGG 2 cut(s) 189, 1412
Bst4CI ACNGT 6 cut(s) 43, 1150, 1307, 2311, 2322, 2390
Bst6I CTCTTC 1 cut(s) 306
BstAFI CTTAAG 1 cut(s) 2401
BstAPI GCANNNNNTGC 1 cut(s) 326
BstAUI TGTACA 1 cut(s) 1219
BstC8I GCNNGC 3 cut(s) 282, 1466, 1504
BstDEI CTNAG 8 cut(s) 197, 662, 670, 750, 1388, 1824, 1949, 2018
BstDSI CCRYGG 2 cut(s) 1459, 1741
BstEII GGTNACC 1 cut(s) 2434
BstF5I GGATG 5 cut(s) 121, 265, 989, 1254, 1942
BstFNI CGCG 1 cut(s) 1504
BstHHI GCGC 3 cut(s) 527, 1504, 1506
BstMAI GTCTC 3 cut(s) 268, 754, 1832
BstMWI GCNNNNNNNGC 3 cut(s) 326, 1461, 1597
BstNI CCWGG 2 cut(s) 189, 1412
BstPI GGTNACC 1 cut(s) 2434
BstSCI CCNGG 2 cut(s) 187, 1410
BstSFI CTRYAG 2 cut(s) 465, 1595
BstSLI GKGCMC 1 cut(s) 821
BstUI CGCG 1 cut(s) 1504
BstV1I GCAGC 6 cut(s) 451, 511, 1012, 1264, 1609, 2495
BstV2I GAAGAC 1 cut(s) 1638
Bsu15I ATCGAT 1 cut(s) 15
BsuRI GGCC 5 cut(s) 138, 1196, 1892, 2399, 2532
BsuTUI ATCGAT 1 cut(s) 15
BtgI CCRYGG 2 cut(s) 1459, 1741
BtsCI GGATG 5 cut(s) 121, 265, 989, 1254, 1942
BtsI GCAGTG 1 cut(s) 527
BtsIMutI CAGTG 5 cut(s) 527, 1312, 1589, 2260, 2395
BveI ACCTGC 3 cut(s) 870, 1392, 1602
Cac8I GCNNGC 3 cut(s) 282, 1466, 1504
CfoI GCGC 3 cut(s) 527, 1504, 1506
Cfr13I GGNCC 2 cut(s) 1195, 1682
ClaI ATCGAT 1 cut(s) 15
Csp6I GTAC 8 cut(s) 169, 581, 859, 989, 1220, 1658, 2022, 2063
CspCI CAANNNNNGTGG 2 cut(s) 2154, 2189
CviQI GTAC 8 cut(s) 169, 581, 859, 989, 1220, 1658, 2022, 2063
DdeI CTNAG 8 cut(s) 197, 662, 670, 750, 1388, 1824, 1949, 2018
DraI TTTAAA 2 cut(s) 427, 2446
DrdI GACNNNNNNGTC 1 cut(s) 1478
DseDI GACNNNNNNGTC 1 cut(s) 1478
EaeI YGGCCR 1 cut(s) 1890
Eam1104I CTCTTC 1 cut(s) 306
EarI CTCTTC 1 cut(s) 306
Eco130I CCWWGG 2 cut(s) 161, 1459
Eco147I AGGCCT 1 cut(s) 2532
Eco24I GRGCYC 1 cut(s) 1581
Eco32I GATATC 3 cut(s) 19, 1777, 1796
Eco47I GGWCC 1 cut(s) 1682
Eco57I CTGAAG 2 cut(s) 330, 1220
Eco91I GGTNACC 1 cut(s) 2434
EcoO65I GGTNACC 1 cut(s) 2434
EcoRI GAATTC 1 cut(s) 365
EcoRII CCWGG 2 cut(s) 187, 1410
EcoRV GATATC 3 cut(s) 19, 1777, 1796
EcoT14I CCWWGG 2 cut(s) 161, 1459
EcoT38I GRGCYC 1 cut(s) 1581
ErhI CCWWGG 2 cut(s) 161, 1459
Esp3I CGTCTC 2 cut(s) 268, 1832
FalI AAGNNNNNCTT 4 cut(s) 1284, 1316, 2487, 2519
FaqI GGGAC 2 cut(s) 1393, 1967
FbaI TGATCA 5 cut(s) 975, 1173, 2230, 2290, 2595
Fnu4HI GCNGC 7 cut(s) 465, 500, 1001, 1194, 1253, 1598, 2484
FokI GGATG 5 cut(s) 128, 272, 996, 1261, 1929
FriOI GRGCYC 1 cut(s) 1581
Fsp4HI GCNGC 7 cut(s) 465, 500, 1001, 1194, 1253, 1598, 2484
FspBI CTAG 5 cut(s) 162, 929, 1911, 2376, 2642
GlaI GCGC 3 cut(s) 526, 1503, 1505
GluI GCNGC 7 cut(s) 465, 500, 1001, 1194, 1253, 1598, 2484
GsaI CCCAGC 3 cut(s) 333, 818, 1641
GsuI CTGGAG 2 cut(s) 1461, 1565
HaeIII GGCC 5 cut(s) 138, 1196, 1892, 2399, 2532
HhaI GCGC 3 cut(s) 527, 1504, 1506
Hin6I GCGC 3 cut(s) 525, 1502, 1504
HinP1I GCGC 3 cut(s) 525, 1502, 1504
HincII GTYRAC 1 cut(s) 109
HindII GTYRAC 1 cut(s) 109
HinfI GANTC 6 cut(s) 668, 1114, 1472, 1671, 2602, 2631
HphI GGTGA 3 cut(s) 55, 394, 1931
Hpy166II GTNNAC 7 cut(s) 109, 989, 1141, 1220, 1222, 2063, 2356
Hpy188I TCNGA 5 cut(s) 451, 613, 673, 1159, 2186
Hpy188III TCNNGA 5 cut(s) 230, 416, 1111, 2071, 2599
Hpy8I GTNNAC 7 cut(s) 109, 989, 1141, 1220, 1222, 2063, 2356
Hpy99I CGWCG 2 cut(s) 779, 2099
HpyAV CCTTC 7 cut(s) 232, 310, 843, 929, 1417, 2522, 2621
HpyCH4III ACNGT 6 cut(s) 43, 1150, 1307, 2311, 2322, 2390
HpyF10VI GCNNNNNNNGC 3 cut(s) 326, 1461, 1597
HpyF3I CTNAG 8 cut(s) 197, 662, 670, 750, 1388, 1824, 1949, 2018
HspAI GCGC 3 cut(s) 525, 1502, 1504
Ksp22I TGATCA 5 cut(s) 975, 1173, 2230, 2290, 2595
LmnI GCTCC 2 cut(s) 95, 1584
Lsp1109I GCAGC 6 cut(s) 451, 511, 1012, 1264, 1609, 2495
LweI GCATC 4 cut(s) 575, 617, 1239, 1951
MaeI CTAG 5 cut(s) 162, 929, 1911, 2376, 2642
MaeIII GTNAC 8 cut(s) 67, 489, 509, 665, 1231, 2322, 2421, 2434
MfeI CAATTG 2 cut(s) 515, 573
MhlI GDGCHC 4 cut(s) 821, 1581, 1593, 2455
MlsI TGGCCA 1 cut(s) 1892
MluNI TGGCCA 1 cut(s) 1892
MlyI GAGTC 4 cut(s) 662, 1108, 1466, 2611
MmeI TCCRAC 1 cut(s) 62
Mox20I TGGCCA 1 cut(s) 1892
MscI TGGCCA 1 cut(s) 1892
MslI CAYNNNNRTG 3 cut(s) 254, 340, 1561
Msp20I TGGCCA 1 cut(s) 1892
MspA1I CMGCKG 1 cut(s) 2486
MspCI CTTAAG 1 cut(s) 2401
MspR9I CCNGG 2 cut(s) 189, 1412
MunI CAATTG 2 cut(s) 515, 573
Mva1269I GAATGC 1 cut(s) 1331
MvaI CCWGG 2 cut(s) 189, 1412
MvnI CGCG 1 cut(s) 1504
MwoI GCNNNNNNNGC 3 cut(s) 326, 1461, 1597
NcoI CCATGG 1 cut(s) 1459
NlaIV GGNNCC 3 cut(s) 820, 1456, 1580
NmuCI GTSAC 3 cut(s) 509, 665, 2322
PacI TTAATTAA 1 cut(s) 1101
PaqCI CACCTGC 1 cut(s) 1602
PauI GCGCGC 1 cut(s) 1502
PceI AGGCCT 1 cut(s) 2532
PcsI WCGNNNNNNNCGW 1 cut(s) 1252
PctI GAATGC 1 cut(s) 1331
PfeI GAWTC 2 cut(s) 1671, 2631
PkrI GCNGC 7 cut(s) 466, 501, 1002, 1195, 1254, 1599, 2485
PleI GAGTC 4 cut(s) 662, 1108, 1466, 2610
PpsI GAGTC 4 cut(s) 662, 1108, 1466, 2610
PshBI ATTAAT 1 cut(s) 1097
Psp6I CCWGG 2 cut(s) 187, 1410
PspEI GGTNACC 1 cut(s) 2434
PspFI CCCAGC 3 cut(s) 329, 814, 1637
PspGI CCWGG 2 cut(s) 187, 1410
PspN4I GGNNCC 3 cut(s) 820, 1456, 1580
PspPI GGNCC 2 cut(s) 1195, 1682
PstI CTGCAG 2 cut(s) 469, 1599
PteI GCGCGC 1 cut(s) 1502
PvuII CAGCTG 1 cut(s) 2486
RsaI GTAC 8 cut(s) 170, 582, 860, 990, 1221, 1659, 2023, 2064
RsaNI GTAC 8 cut(s) 169, 581, 859, 989, 1220, 1658, 2022, 2063
RseI CAYNNNNRTG 3 cut(s) 254, 340, 1561
SatI GCNGC 7 cut(s) 465, 500, 1001, 1194, 1253, 1598, 2484
Sau96I GGNCC 2 cut(s) 1195, 1682
SchI GAGTC 4 cut(s) 662, 1108, 1466, 2611
ScrFI CCNGG 2 cut(s) 189, 1412
SduI GDGCHC 4 cut(s) 821, 1581, 1593, 2455
SfaNI GCATC 4 cut(s) 575, 617, 1239, 1951
SfcI CTRYAG 2 cut(s) 465, 1595
SinI GGWCC 1 cut(s) 1682
SmiMI CAYNNNNRTG 3 cut(s) 254, 340, 1561
SmlI CTYRAG 3 cut(s) 140, 228, 2401
SmoI CTYRAG 3 cut(s) 140, 228, 2401
SseBI AGGCCT 1 cut(s) 2532
SsiI CCGC 2 cut(s) 1193, 1566
SspMI CTAG 5 cut(s) 162, 929, 1911, 2376, 2642
StuI AGGCCT 1 cut(s) 2532
StyD4I CCNGG 2 cut(s) 187, 1410
StyI CCWWGG 2 cut(s) 161, 1459
TaaI ACNGT 6 cut(s) 43, 1150, 1307, 2311, 2322, 2390
TaqI TCGA 4 cut(s) 15, 777, 1492, 1798
TaqII GACCGA 1 cut(s) 1176
TatI WGTACW 5 cut(s) 168, 988, 1219, 2021, 2062
TauI GCSGC 1 cut(s) 1196
TfiI GAWTC 2 cut(s) 1671, 2631
TscAI CASTG 5 cut(s) 527, 1312, 1589, 2260, 2395
TseFI GTSAC 3 cut(s) 509, 665, 2322
TseI GCWGC 6 cut(s) 464, 499, 1000, 1252, 1597, 2483
Tsp45I GTSAC 3 cut(s) 509, 665, 2322
TspGWI ACGGA 4 cut(s) 695, 705, 1261, 1730
TspRI CASTG 5 cut(s) 527, 1312, 1589, 2260, 2395
Vha464I CTTAAG 1 cut(s) 2401
VpaK11BI GGWCC 1 cut(s) 1682
VspI ATTAAT 1 cut(s) 1097
XapI RAATTY 4 cut(s) 365, 1550, 1970, 2441
XmaJI CCTAGG 1 cut(s) 161
XspI CTAG 5 cut(s) 162, 929, 1911, 2376, 2642
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.