RLG00000029945

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000268
Physical Location & Seq
Reverse (-)
51870568 .. 51911751
41184 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029945

Sequence Viewer

Length: 1644 bp
ATGTATTTCGTCATTTTCCTGACAACTGTTATGAGTAACTATGGCGCCAGCGAAAAAAAAAAGGTCCGTGACAATGAAGACAATATTAATGGTCAAGAAAATAAGGAAGAGAAAGTGGTTGTTGGTCGATATACCTTCAACAGATATTTGAAAATCCAAGCGGAAGAGAGAAATATCAAAATAGATAATGAGTTCAGGAAAGCAATCGCTTTGAAATGGCATACACTTGATCCAACTGAGAAGGCGAAGATTTTTGTTCCAAGCGCGCATGCTTCTAATGCAACTCCTAAAGCCAGTGAGGATTTCTCGAAATGCTCAGCAACTTTATTTCATGATATTGTTTCCCGATTTTCGGAAGATCAAATTAACCCAATAAAAGAAATGGATTTCGGCACGTTGGTGCAATTATCATGTACCACGTTACGTGGTGATTTTTGTCGCTTATTGATCGACAATTTTGACACTGAAGCTTGTACTATTGCGTTGCATGGAGGATCAAGTGTCGACTTTACGGGCTCAATCGAAGACGATGACATGACAACTTCAAAGTCAGGCTTCATGTTATTGGCCCTTCGTACCTTGCTTTGCCCCCATACTTCAATAAACATCCACTCGAAGTACCTTATACGACTAAGGGATCCGAAAAATATAAACTCTCTAATTTGGTCGTTTATTGTTAATTTCACAAGAAAAAAAAGTAGCTTATGTTCAATGAGTCATTGCAGAAGTAGCTTATGTTTGGTGAGTCATTGTGATGCTTTGTCAGAATTTGGTAGCACTGCACAAAAGAGGTTTGCACCCATATTCGGAGAAGCTAAACTTATGGATTTTGACATGATTTTCATCCCCATCTTAGATGAGGGTACTGAACCGAGGCATTGGTTCCTTATGGTAGTAAACATTCCAAGCACCGAAGTAGAGATATGGGACACTTATCCTAGTACACACACTGAGGCTCGAACTAATCTCATTCATCATTTGATCGCCGATGGCAGTGACAGACTATTGATGGTGGAGTCGGACTCCACGACGGATCGAAGGAACTTGAGGAGTGAACGGAGGTTTCAGACGACGCAGACCAGATTGCCGATGGCGGTGGCCACTGAGTCTGATTCGGATTCCGGCGAGGGCTTAGAGTACGTCATCCATATCATGTTCCCAAACAACATAATGGCTTTGACTGTGGCATTGACGTACATGATCAAATTCATGCTGGATTATGAGAATACATGTCAAATTGGGGCTAAGTTTGATTCTGTAAATGAGTGCGTGCAACTAGCCCTTAGGTTGTTGAAGCACCCAAACAACCTAGCACTCAGCGAAATTGAGAAAGTCCGCTTTGCTGCGACTGGGATCGGACGACGGAACCGAGCTGCCGTGAACCTCAGAAGTGGAAAGAAGCGCGAACCAGTAATAGACGGCGGCTTCCTCCTCTTGTACGCTGACTCCACCAATGTCCCCCAACTTCCGATTCACCTCATACTCCGACGACTCCAATTTCCGGAGGCCCCAAACTCGTTCGCCAACAACGAAACCAGCTCCAATGTGGTCGGGTTGGAGTTCACCGGCCACGAAACCCACTCAAATGTCACCGGGCCCAATCCTTCGCCGGAGAGAGAGAGAGAGAGAGAGAGAGAGGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

548

Amino Acids

61.93

Weight (kDa)

6.13

Isoelectric Point (pI)

49.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C48 PF02902 270 - 375 1.7e-07 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000268)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23642 FvH4_2g09911 FvH4_2g09911 FvH4_2g09911 FvH4_3g18421 FvH4_4g05321 FvH4_6g28332 FvH4_7g31231
prunus_persica Prupe.2G063700_v2.0.a1 Prupe.5G238300_v2.0.a1 Prupe.6G153700_v2.0.a1 Prupe.7G017400_v2.0.a1 Prupe.7G070100_v2.0.a1 Prupe.7G070100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0345471 RchiOBHm_Chr1g0366901 RchiOBHm_Chr2g0162601 RchiOBHm_Chr6g0266661 RchiOBHm_Chr6g0266671
rosa_laevigata RLG00000005047 RLG00000007971 RLG00000008530 RLG00000009009 RLG00000009046 RLG00000014086 RLG00000017162 RLG00000017163 RLG00000017440 RLG00000019098 RLG00000022623 RLG00000024566 RLG00000027733 RLG00000029878 RLG00000029945 RLG00000030127 RLG00000030157 RLG00000031078 RLG00000031080 RLG00000034338 RLG00000034670
rosa_multiflora Rmu_sc0002106.1_g000007 Rmu_sc0002531.1_g000064 Rmu_sc0003433.1_g000005 Rmu_sc0004704.1_g000001 Rmu_sc0004704.1_g000002 Rmu_sc0004888.1_g000042 Rmu_sc0005599.1_g000031 Rmu_sc0006413.1_g000014 Rmu_sc0006413.1_g000018
rosa_roxburghii Rroxscaffold_1G00031940 Rroxscaffold_1G00032500 Rroxscaffold_1G00074770 Rroxscaffold_1G00074780 Rroxscaffold_1G00075150 Rroxscaffold_2G00125060 Rroxscaffold_2G00125070 Rroxscaffold_2G00125800 Rroxscaffold_2G00125820 Rroxscaffold_2G00139560 Rroxscaffold_2G00140550 Rroxscaffold_4G00314090 Rroxscaffold_6G00390050 Rroxscaffold_6G00390520 Rroxscaffold_6G00390530 Rroxscaffold_6G00428030 Rroxscaffold_7G00201570 Rroxscaffold_7G00201580 Rroxscaffold_7G00207070 Rroxscaffold_7G00207080 Rroxscaffold_7G00207240
rosa_rugosa Rorug01G0408000 Rorug01G0408100 Rorug01G0408100 Rorug01G0408200 Rorug02G0155200 Rorug02G0181500 Rorug02G0288400 Rorug03G0208600 Rorug03G0272300 Rorug06G0005500 Rorug06G0005600 Rorug06G0026300.1 Rorug06G0026400 Rorug06G0026500 Rorug06G0026600 Rorug06G0026600 Rorug06G0026600 Rorug06G0145800 Rorug07G0305200
rosa_samantha Rh1AG062100 Rh1BG131900 Rh1BG157000 Rh1CG021100 Rh1CG321600 Rh1DG188200 Rh2DG388300 Rh3AG320500 Rh3BG355400 Rh3CG352400 Rh3CG353200 Rh4AG045800 Rh4DG171700 Rh5AG196000 Rh5AG196100 Rh5CG346800 Rh6BG147600 Rh6BG147700 Rh6CG143200 Rh6CG143500 Rh6CG174600 Rh6CG391800 Rh6DG132100 Rh6DG132300 Rh6DG167100 Rh6DG167200 Rh7AG211600 Rh7BG307000 Rh7BG307300 Rh7BG398300
rosa_wichuraiana Rw0G001830 Rw0G001840 Rw0G018160 Rw0G018170 Rw3G028040 Rw5G017860 Rw5G026710 Rw6G012630 Rw6G012650 Rw6G012780 Rw6G012800 Rw7G019130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 44
AccI GTMKAC 1 cut(s) 504
AccII CGCG 2 cut(s) 266, 1404
AccIII TCCGGA 1 cut(s) 1501
AciI CCGC 4 cut(s) 161, 1094, 1336, 1422
AclWI GGATC 6 cut(s) 224, 502, 632, 645, 1041, 1361
AcoI YGGCCR 2 cut(s) 1098, 1567
AcsI RAATTY 2 cut(s) 767, 1205
AcuI CTGAAG 1 cut(s) 486
AcyI GRCGYC 1 cut(s) 45
AfaI GTAC 9 cut(s) 415, 475, 577, 620, 865, 943, 1139, 1196, 1439
AfiI CCNNNNNNNGG 3 cut(s) 352, 806, 1501
AflIII ACRYGT 1 cut(s) 1229
AgsI TTSAA 7 cut(s) 139, 151, 214, 546, 600, 711, 1294
AjuI GAANNNNNNNTTGG 2 cut(s) 1455, 1487
AleI CACNNNNGTG 1 cut(s) 398
AluBI AGCT 6 cut(s) 470, 702, 732, 815, 1373, 1539
AluI AGCT 6 cut(s) 470, 702, 732, 815, 1373, 1539
AlwI GGATC 6 cut(s) 224, 502, 632, 645, 1041, 1361
Aor13HI TCCGGA 1 cut(s) 1501
AoxI GGCC 5 cut(s) 567, 1098, 1506, 1567, 1595
ApaI GGGCCC 1 cut(s) 1599
ApeKI GCWGC 2 cut(s) 1343, 1373
ApoI RAATTY 2 cut(s) 767, 1205
AseI ATTAAT 1 cut(s) 87
AspLEI GCGC 4 cut(s) 47, 266, 268, 1404
AspS9I GGNCC 5 cut(s) 64, 568, 1507, 1595, 1596
AsuC2I CCSGG 1 cut(s) 1594
AsuHPI GGTGA 5 cut(s) 440, 754, 1466, 1555, 1582
AvaII GGWCC 1 cut(s) 64
AxyI CCTNAGG 1 cut(s) 1283
BaeGI GKGCMC 1 cut(s) 1599
BalI TGGCCA 1 cut(s) 1100
BamHI GGATCC 1 cut(s) 637
BanI GGYRCC 1 cut(s) 44
BanII GRGCYC 2 cut(s) 518, 1599
BbsI GAAGAC 2 cut(s) 84, 531
BbvI GCAGC 2 cut(s) 1330, 1360
BccI CCATC 4 cut(s) 857, 983, 1003, 1084
BceAI ACGGC 2 cut(s) 1361, 1435
BclI TGATCA 1 cut(s) 1200
BcnI CCSGG 1 cut(s) 1594
BfaI CTAG 3 cut(s) 939, 1277, 1310
BfoI RGCGCY 1 cut(s) 48
BisI GCNGC 3 cut(s) 1344, 1374, 1423
BlpI GCTNAGC 1 cut(s) 316
BlsI GCNGC 3 cut(s) 1345, 1375, 1424
Bme1390I CCNGG 1 cut(s) 1594
Bme18I GGWCC 1 cut(s) 64
BmgT120I GGNCC 5 cut(s) 64, 568, 1507, 1595, 1596
BmiI GGNNCC 6 cut(s) 46, 639, 884, 1367, 1509, 1597
BmrFI CCNGG 1 cut(s) 1594
BmrI ACTGGG 1 cut(s) 1359
BmsI GCATC 1 cut(s) 745
BmuI ACTGGG 1 cut(s) 1359
BpiI GAAGAC 2 cut(s) 84, 531
BplI GAGNNNNNCTC 4 cut(s) 290, 322, 1007, 1039
Bpu1102I GCTNAGC 1 cut(s) 316
BpuEI CTTGAG 1 cut(s) 1066
BpuMI CCSGG 1 cut(s) 1594
BsaAI YACGTR 1 cut(s) 425
BsaBI GATNNNNATC 1 cut(s) 842
BsaHI GRCGYC 1 cut(s) 45
BsaJI CCNNGG 1 cut(s) 872
BsaWI WCCGGW 1 cut(s) 1501
BsaXI ACNNNNNCTCC 2 cut(s) 1430, 1460
Bsc4I CCNNNNNNNGG 3 cut(s) 352, 806, 1501
Bse118I RCCGGY 1 cut(s) 1565
Bse1I ACTGG 3 cut(s) 294, 1354, 1409
Bse21I CCTNAGG 1 cut(s) 1283
Bse3DI GCAATG 1 cut(s) 718
Bse8I GATNNNNATC 1 cut(s) 842
BseAI TCCGGA 1 cut(s) 1501
BseDI CCNNGG 1 cut(s) 872
BseGI GGATG 3 cut(s) 606, 843, 1143
BseJI GATNNNNATC 1 cut(s) 842
BseLI CCNNNNNNNGG 3 cut(s) 352, 806, 1501
BseMI GCAATG 1 cut(s) 718
BseMII CTCAG 6 cut(s) 228, 330, 942, 1095, 1330, 1399
BseNI ACTGG 3 cut(s) 294, 1354, 1409
BsePI GCGCGC 1 cut(s) 264
BseRI GAGGAG 2 cut(s) 1063, 1421
BseSI GKGCMC 1 cut(s) 1599
BseXI GCAGC 2 cut(s) 1330, 1360
BsgI GTGCAG 1 cut(s) 765
Bsh1236I CGCG 2 cut(s) 266, 1404
BshFI GGCC 5 cut(s) 569, 1100, 1508, 1569, 1597
BshNI GGYRCC 1 cut(s) 44
BsiSI CCGG 5 cut(s) 1122, 1502, 1566, 1593, 1610
BslFI GGGAC 2 cut(s) 941, 1442
BslI CCNNNNNNNGG 3 cut(s) 352, 806, 1501
BsmFI GGGAC 2 cut(s) 941, 1442
BsnI GGCC 5 cut(s) 569, 1100, 1508, 1569, 1597
Bsp120I GGGCCC 1 cut(s) 1595
Bsp1286I GDGCHC 2 cut(s) 518, 1599
Bsp13I TCCGGA 1 cut(s) 1501
Bsp143I GATC 9 cut(s) 229, 358, 447, 494, 637, 981, 1033, 1200, 1353
Bsp1720I GCTNAGC 1 cut(s) 316
BspACI CCGC 4 cut(s) 161, 1094, 1336, 1422
BspANI GGCC 5 cut(s) 569, 1100, 1508, 1569, 1597
BspCNI CTCAG 6 cut(s) 229, 329, 943, 1096, 1329, 1398
BspEI TCCGGA 1 cut(s) 1501
BspFNI CGCG 2 cut(s) 266, 1404
BspHI TCATGA 1 cut(s) 331
BspLI GGNNCC 6 cut(s) 46, 639, 884, 1367, 1509, 1597
BspPI GGATC 6 cut(s) 224, 502, 632, 645, 1041, 1361
BspT107I GGYRCC 1 cut(s) 44
BsrDI GCAATG 1 cut(s) 718
BsrFI RCCGGY 1 cut(s) 1565
BsrI ACTGG 3 cut(s) 294, 1354, 1409
BssAI RCCGGY 1 cut(s) 1565
BssECI CCNNGG 1 cut(s) 872
BssHII GCGCGC 1 cut(s) 264
BssMI GATC 9 cut(s) 229, 358, 447, 494, 637, 981, 1033, 1200, 1353
BssNI GRCGYC 1 cut(s) 45
Bst4CI ACNGT 2 cut(s) 28, 1183
Bst6I CTCTTC 2 cut(s) 102, 159
BstACI GRCGYC 1 cut(s) 45
BstBAI YACGTR 1 cut(s) 425
BstC8I GCNNGC 4 cut(s) 49, 266, 270, 1271
BstF5I GGATG 3 cut(s) 606, 843, 1143
BstFNI CGCG 2 cut(s) 266, 1404
BstH2I RGCGCY 1 cut(s) 48
BstHHI GCGC 4 cut(s) 47, 266, 268, 1404
BstKTI GATC 9 cut(s) 232, 361, 450, 497, 640, 984, 1036, 1203, 1356
BstMBI GATC 9 cut(s) 229, 358, 447, 494, 637, 981, 1033, 1200, 1353
BstMWI GCNNNNNNNGC 2 cut(s) 278, 729
BstNSI RCATGY 2 cut(s) 272, 1233
BstSCI CCNGG 1 cut(s) 1592
BstSLI GKGCMC 1 cut(s) 1599
BstUI CGCG 2 cut(s) 266, 1404
BstV1I GCAGC 2 cut(s) 1330, 1360
BstV2I GAAGAC 2 cut(s) 84, 531
BstX2I RGATCY 1 cut(s) 637
BstYI RGATCY 1 cut(s) 637
Bsu36I CCTNAGG 1 cut(s) 1283
BsuRI GGCC 5 cut(s) 569, 1100, 1508, 1569, 1597
BtsCI GGATG 3 cut(s) 606, 843, 1143
BtsI GCAGTG 2 cut(s) 777, 1000
BtsIMutI CAGTG 6 cut(s) 301, 462, 777, 948, 1000, 1101
Cac8I GCNNGC 4 cut(s) 49, 266, 270, 1271
CciI TCATGA 1 cut(s) 331
CfoI GCGC 4 cut(s) 47, 266, 268, 1404
Cfr10I RCCGGY 1 cut(s) 1565
Cfr13I GGNCC 5 cut(s) 64, 568, 1507, 1595, 1596
CseI GACGC 1 cut(s) 1081
Csp6I GTAC 9 cut(s) 414, 474, 576, 619, 864, 942, 1138, 1195, 1438
CviQI GTAC 9 cut(s) 414, 474, 576, 619, 864, 942, 1138, 1195, 1438
DinI GGCGCC 1 cut(s) 46
DpnI GATC 9 cut(s) 231, 360, 449, 496, 639, 983, 1035, 1202, 1355
DpnII GATC 9 cut(s) 229, 358, 447, 494, 637, 981, 1033, 1200, 1353
EaeI YGGCCR 2 cut(s) 1098, 1567
Eam1104I CTCTTC 2 cut(s) 102, 159
EarI CTCTTC 2 cut(s) 102, 159
Eco24I GRGCYC 2 cut(s) 518, 1599
Eco47I GGWCC 1 cut(s) 64
Eco57I CTGAAG 1 cut(s) 486
Eco81I CCTNAGG 1 cut(s) 1283
EcoO109I RGGNCCY 1 cut(s) 1507
EcoT38I GRGCYC 2 cut(s) 518, 1599
EgeI GGCGCC 1 cut(s) 46
EheI GGCGCC 1 cut(s) 46
FalI AAGNNNNNCTT 4 cut(s) 539, 571, 804, 836
FaqI GGGAC 2 cut(s) 941, 1442
FbaI TGATCA 1 cut(s) 1200
FblI GTMKAC 1 cut(s) 504
Fnu4HI GCNGC 3 cut(s) 1344, 1374, 1423
FokI GGATG 3 cut(s) 593, 830, 1130
FriOI GRGCYC 2 cut(s) 518, 1599
Fsp4HI GCNGC 3 cut(s) 1344, 1374, 1423
FspBI CTAG 3 cut(s) 939, 1277, 1310
GlaI GCGC 4 cut(s) 46, 265, 267, 1403
GluI GCNGC 3 cut(s) 1344, 1374, 1423
HaeII RGCGCY 1 cut(s) 48
HaeIII GGCC 5 cut(s) 569, 1100, 1508, 1569, 1597
HapII CCGG 5 cut(s) 1122, 1502, 1566, 1593, 1610
HgaI GACGC 1 cut(s) 1081
HhaI GCGC 4 cut(s) 47, 266, 268, 1404
Hin1I GRCGYC 1 cut(s) 45
Hin6I GCGC 4 cut(s) 45, 264, 266, 1402
HinP1I GCGC 4 cut(s) 45, 264, 266, 1402
HincII GTYRAC 1 cut(s) 505
HindII GTYRAC 1 cut(s) 505
HindIII AAGCTT 1 cut(s) 468
HpaII CCGG 5 cut(s) 1122, 1502, 1566, 1593, 1610
HphI GGTGA 5 cut(s) 440, 754, 1466, 1555, 1582
Hpy166II GTNNAC 6 cut(s) 505, 898, 944, 1055, 1381, 1563
Hpy188III TCNNGA 7 cut(s) 19, 95, 196, 307, 332, 345, 1502
Hpy8I GTNNAC 6 cut(s) 505, 898, 944, 1055, 1381, 1563
Hpy99I CGWCG 4 cut(s) 1033, 1075, 1365, 1491
HpyAV CCTTC 5 cut(s) 145, 235, 581, 1032, 1614
HpyCH4III ACNGT 2 cut(s) 28, 1183
HpyCH4IV ACGT 5 cut(s) 395, 419, 424, 1140, 1193
HpyCH4V TGCA 7 cut(s) 281, 403, 487, 723, 782, 797, 1273
HpyF10VI GCNNNNNNNGC 2 cut(s) 278, 729
HpySE526I ACGT 5 cut(s) 395, 419, 424, 1140, 1193
Hsp92I GRCGYC 1 cut(s) 45
HspAI GCGC 4 cut(s) 45, 264, 266, 1402
KasI GGCGCC 1 cut(s) 44
Kpn2I TCCGGA 1 cut(s) 1501
Ksp22I TGATCA 1 cut(s) 1200
Kzo9I GATC 9 cut(s) 229, 358, 447, 494, 637, 981, 1033, 1200, 1353
LmnI GCTCC 1 cut(s) 1544
Lsp1109I GCAGC 2 cut(s) 1330, 1360
LweI GCATC 1 cut(s) 745
MaeI CTAG 3 cut(s) 939, 1277, 1310
MaeII ACGT 5 cut(s) 395, 419, 424, 1140, 1193
MaeIII GTNAC 5 cut(s) 35, 68, 420, 995, 1588
MalI GATC 9 cut(s) 231, 360, 449, 496, 639, 983, 1035, 1202, 1355
MboI GATC 9 cut(s) 229, 358, 447, 494, 637, 981, 1033, 1200, 1353
MboII GAAGA 6 cut(s) 89, 119, 176, 259, 368, 536
MflI RGATCY 1 cut(s) 637
MhlI GDGCHC 2 cut(s) 518, 1599
MlsI TGGCCA 1 cut(s) 1100
MluNI TGGCCA 1 cut(s) 1100
Mly113I GGCGCC 1 cut(s) 45
MlyI GAGTC 7 cut(s) 724, 754, 1016, 1025, 1115, 1439, 1485
MmeI TCCRAC 4 cut(s) 257, 999, 1510, 1536
Mox20I TGGCCA 1 cut(s) 1100
MroI TCCGGA 1 cut(s) 1501
MscI TGGCCA 1 cut(s) 1100
MseI TTAA 3 cut(s) 87, 366, 678
MslI CAYNNNNRTG 3 cut(s) 398, 753, 1584
Msp20I TGGCCA 1 cut(s) 1100
MspI CCGG 5 cut(s) 1122, 1502, 1566, 1593, 1610
MspR9I CCNGG 1 cut(s) 1594
MvnI CGCG 2 cut(s) 266, 1404
MwoI GCNNNNNNNGC 2 cut(s) 278, 729
NarI GGCGCC 1 cut(s) 45
NciI CCSGG 1 cut(s) 1594
NdeII GATC 9 cut(s) 229, 358, 447, 494, 637, 981, 1033, 1200, 1353
NlaIV GGNNCC 6 cut(s) 46, 639, 884, 1367, 1509, 1597
NmuCI GTSAC 3 cut(s) 68, 995, 1588
NspI RCATGY 2 cut(s) 272, 1233
OliI CACNNNNGTG 1 cut(s) 398
PaeI GCATGC 1 cut(s) 272
PagI TCATGA 1 cut(s) 331
PauI GCGCGC 1 cut(s) 264
PciI ACATGT 1 cut(s) 1229
PcsI WCGNNNNNNNCGW 3 cut(s) 1025, 1366, 1527
PfeI GAWTC 4 cut(s) 1112, 1118, 1253, 1471
PkrI GCNGC 3 cut(s) 1345, 1375, 1424
PleI GAGTC 7 cut(s) 723, 753, 1016, 1024, 1114, 1439, 1485
PluTI GGCGCC 1 cut(s) 48
PpsI GAGTC 7 cut(s) 723, 753, 1016, 1024, 1114, 1439, 1485
Ppu21I YACGTR 1 cut(s) 425
PscI ACATGT 1 cut(s) 1229
PshBI ATTAAT 1 cut(s) 87
PspN4I GGNNCC 6 cut(s) 46, 639, 884, 1367, 1509, 1597
PspOMI GGGCCC 1 cut(s) 1595
PspPI GGNCC 5 cut(s) 64, 568, 1507, 1595, 1596
PsrI GAACNNNNNNTAC 2 cut(s) 691, 723
PsuI RGATCY 1 cut(s) 637
PteI GCGCGC 1 cut(s) 264
RsaI GTAC 9 cut(s) 415, 475, 577, 620, 865, 943, 1139, 1196, 1439
RsaNI GTAC 9 cut(s) 414, 474, 576, 619, 864, 942, 1138, 1195, 1438
RseI CAYNNNNRTG 3 cut(s) 398, 753, 1584
SalI GTCGAC 1 cut(s) 503
SaqAI TTAA 3 cut(s) 87, 366, 678
SatI GCNGC 3 cut(s) 1344, 1374, 1423
Sau3AI GATC 9 cut(s) 229, 358, 447, 494, 637, 981, 1033, 1200, 1353
Sau96I GGNCC 5 cut(s) 64, 568, 1507, 1595, 1596
SchI GAGTC 7 cut(s) 724, 754, 1016, 1025, 1115, 1439, 1485
ScrFI CCNGG 1 cut(s) 1594
SduI GDGCHC 2 cut(s) 518, 1599
SfaNI GCATC 1 cut(s) 745
SfoI GGCGCC 1 cut(s) 46
SinI GGWCC 1 cut(s) 64
SmiMI CAYNNNNRTG 3 cut(s) 398, 753, 1584
SmlI CTYRAG 1 cut(s) 1045
SmoI CTYRAG 1 cut(s) 1045
SphI GCATGC 1 cut(s) 272
SsiI CCGC 4 cut(s) 161, 1094, 1336, 1422
SspDI GGCGCC 1 cut(s) 44
SspI AATATT 1 cut(s) 85
SspMI CTAG 3 cut(s) 939, 1277, 1310
StyD4I CCNGG 1 cut(s) 1592
TaaI ACNGT 2 cut(s) 28, 1183
TaiI ACGT 5 cut(s) 398, 422, 427, 1143, 1196
TaqI TCGA 8 cut(s) 127, 308, 450, 504, 522, 614, 958, 1036
TatI WGTACW 2 cut(s) 473, 941
TauI GCSGC 1 cut(s) 1425
TfiI GAWTC 4 cut(s) 1112, 1118, 1253, 1471
Tru1I TTAA 3 cut(s) 87, 366, 678
Tru9I TTAA 3 cut(s) 87, 366, 678
TscAI CASTG 6 cut(s) 301, 469, 784, 955, 1000, 1108
TseFI GTSAC 3 cut(s) 68, 995, 1588
TseI GCWGC 2 cut(s) 1343, 1373
Tsp45I GTSAC 3 cut(s) 68, 995, 1588
TspDTI ATGAA 6 cut(s) 90, 320, 547, 832, 962, 1198
TspGWI ACGGA 4 cut(s) 56, 1046, 1072, 1378
TspRI CASTG 6 cut(s) 301, 469, 784, 955, 1000, 1108
VpaK11BI GGWCC 1 cut(s) 64
VspI ATTAAT 1 cut(s) 87
XapI RAATTY 2 cut(s) 767, 1205
XceI RCATGY 2 cut(s) 272, 1233
XcmI CCANNNNNNNNNTGG 2 cut(s) 1087, 1543
XmiI GTMKAC 1 cut(s) 504
XspI CTAG 3 cut(s) 939, 1277, 1310
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.