MULE transposase domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| MULE | PF10551 | 2 - 45 | 5.7e-09 | MULE transposase domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 666, 2606 |
| Acc65I | GGTACC | 3 cut(s) | 983, 2159, 2381 |
| AccB1I | GGYRCC | 5 cut(s) | 983, 1222, 1586, 2159, 2381 |
| AccBSI | CCGCTC | 1 cut(s) | 500 |
| AciI | CCGC | 3 cut(s) | 428, 498, 838 |
| AclWI | GGATC | 4 cut(s) | 713, 1067, 1091, 1988 |
| AcoI | YGGCCR | 3 cut(s) | 915, 1294, 1497 |
| AcsI | RAATTY | 7 cut(s) | 634, 1323, 1490, 1712, 2246, 2468, 2710 |
| AcuI | CTGAAG | 5 cut(s) | 327, 382, 492, 882, 1758 |
| AcyI | GRCGYC | 1 cut(s) | 1223 |
| AdeI | CACNNNGTG | 1 cut(s) | 1506 |
| AfaI | GTAC | 9 cut(s) | 115, 507, 650, 909, 985, 1617, 1734, 2161, 2383 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1028, 1742, 2464 |
| AflIII | ACRYGT | 1 cut(s) | 2776 |
| AhlI | ACTAGT | 1 cut(s) | 82 |
| AjiI | CACGTC | 1 cut(s) | 2779 |
| AjnI | CCWGG | 2 cut(s) | 91, 917 |
| AluBI | AGCT | 9 cut(s) | 233, 433, 470, 905, 1176, 1331, 2188, 2365, 2410 |
| AluI | AGCT | 9 cut(s) | 233, 433, 470, 905, 1176, 1331, 2188, 2365, 2410 |
| Alw21I | GWGCWC | 2 cut(s) | 692, 1800 |
| Alw26I | GTCTC | 2 cut(s) | 395, 2785 |
| Alw44I | GTGCAC | 1 cut(s) | 688 |
| AlwI | GGATC | 4 cut(s) | 713, 1067, 1091, 1988 |
| Ama87I | CYCGRG | 2 cut(s) | 723, 1768 |
| AoxI | GGCC | 7 cut(s) | 915, 1294, 1413, 1497, 1928, 2685, 2752 |
| ApaLI | GTGCAC | 1 cut(s) | 688 |
| ApeKI | GCWGC | 4 cut(s) | 352, 430, 1268, 1565 |
| ApoI | RAATTY | 7 cut(s) | 634, 1323, 1490, 1712, 2246, 2468, 2710 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 2209, 2241, 2431, 2463, 2687, 2719 |
| AseI | ATTAAT | 1 cut(s) | 1970 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 423, 480 |
| Asp718I | GGTACC | 3 cut(s) | 983, 2159, 2381 |
| AspLEI | GCGC | 2 cut(s) | 804, 1225 |
| AspS9I | GGNCC | 1 cut(s) | 2455 |
| AsuHPI | GGTGA | 6 cut(s) | 65, 283, 1073, 1274, 1297, 1961 |
| AvaI | CYCGRG | 2 cut(s) | 723, 1768 |
| AvaII | GGWCC | 1 cut(s) | 2455 |
| AxyI | CCTNAGG | 1 cut(s) | 1458 |
| BaeGI | GKGCMC | 1 cut(s) | 692 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 806, 839 |
| BalI | TGGCCA | 2 cut(s) | 917, 1499 |
| BanI | GGYRCC | 5 cut(s) | 983, 1222, 1586, 2159, 2381 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1690, 1722 |
| BbsI | GAAGAC | 3 cut(s) | 245, 2051, 2665 |
| Bbv12I | GWGCWC | 2 cut(s) | 692, 1800 |
| BbvI | GCAGC | 4 cut(s) | 364, 442, 1280, 1577 |
| BccI | CCATC | 2 cut(s) | 219, 714 |
| BceAI | ACGGC | 1 cut(s) | 2700 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 714, 748 |
| BciT130I | CCWGG | 2 cut(s) | 93, 919 |
| BclI | TGATCA | 1 cut(s) | 2593 |
| BcoDI | GTCTC | 2 cut(s) | 395, 2785 |
| BcuI | ACTAGT | 1 cut(s) | 82 |
| BfaI | CTAG | 7 cut(s) | 83, 660, 897, 1611, 1859, 2021, 2519 |
| BfmI | CTRYAG | 2 cut(s) | 873, 1563 |
| BfoI | RGCGCY | 1 cut(s) | 1226 |
| BglII | AGATCT | 2 cut(s) | 1528, 2515 |
| BisI | GCNGC | 4 cut(s) | 353, 431, 1269, 1566 |
| BlsI | GCNGC | 4 cut(s) | 354, 432, 1270, 1567 |
| Bme1390I | CCNGG | 2 cut(s) | 93, 919 |
| Bme18I | GGWCC | 1 cut(s) | 2455 |
| BmeT110I | CYCGRG | 2 cut(s) | 723, 1768 |
| BmgBI | CACGTC | 1 cut(s) | 2779 |
| BmgT120I | GGNCC | 1 cut(s) | 2455 |
| BmiI | GGNNCC | 8 cut(s) | 90, 985, 1020, 1224, 1588, 2161, 2383, 2456 |
| BmrFI | CCNGG | 2 cut(s) | 93, 919 |
| BmsI | GCATC | 2 cut(s) | 637, 771 |
| BpiI | GAAGAC | 3 cut(s) | 245, 2051, 2665 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2016 |
| BsaHI | GRCGYC | 1 cut(s) | 1223 |
| BsaJI | CCNNGG | 3 cut(s) | 882, 2682, 2742 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2642, 2672 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1028, 1742, 2464 |
| Bse21I | CCTNAGG | 1 cut(s) | 1458 |
| Bse3DI | GCAATG | 2 cut(s) | 69, 1141 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2016 |
| BseBI | CCWGG | 2 cut(s) | 93, 919 |
| BseDI | CCNNGG | 3 cut(s) | 882, 2682, 2742 |
| BseGI | GGATG | 1 cut(s) | 762 |
| BseJI | GATNNNNATC | 1 cut(s) | 2016 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1028, 1742, 2464 |
| BseMI | GCAATG | 2 cut(s) | 69, 1141 |
| BseMII | CTCAG | 3 cut(s) | 152, 535, 1021 |
| BseRI | GAGGAG | 1 cut(s) | 2591 |
| BseSI | GKGCMC | 1 cut(s) | 692 |
| BseXI | GCAGC | 4 cut(s) | 364, 442, 1280, 1577 |
| BsgI | GTGCAG | 1 cut(s) | 1591 |
| Bsh1285I | CGRYCG | 1 cut(s) | 488 |
| BshFI | GGCC | 7 cut(s) | 917, 1296, 1415, 1499, 1930, 2687, 2754 |
| BshNI | GGYRCC | 5 cut(s) | 983, 1222, 1586, 2159, 2381 |
| BsiEI | CGRYCG | 1 cut(s) | 488 |
| BsiHKAI | GWGCWC | 2 cut(s) | 692, 1800 |
| BsiHKCI | CYCGRG | 2 cut(s) | 723, 1768 |
| BslFI | GGGAC | 1 cut(s) | 2468 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1028, 1742, 2464 |
| BsmAI | GTCTC | 2 cut(s) | 395, 2785 |
| BsmBI | CGTCTC | 1 cut(s) | 2785 |
| BsmFI | GGGAC | 1 cut(s) | 2468 |
| BsmI | GAATGC | 2 cut(s) | 2113, 2335 |
| BsnI | GGCC | 7 cut(s) | 917, 1296, 1415, 1499, 1930, 2687, 2754 |
| BsoBI | CYCGRG | 2 cut(s) | 723, 1768 |
| Bsp1286I | GDGCHC | 2 cut(s) | 692, 1800 |
| Bsp1407I | TGTACA | 2 cut(s) | 113, 648 |
| BspACI | CCGC | 3 cut(s) | 428, 498, 838 |
| BspANI | GGCC | 7 cut(s) | 917, 1296, 1415, 1499, 1930, 2687, 2754 |
| BspCNI | CTCAG | 3 cut(s) | 151, 534, 1020 |
| BspLI | GGNNCC | 8 cut(s) | 90, 985, 1020, 1224, 1588, 2161, 2383, 2456 |
| BspMAI | CTGCAG | 1 cut(s) | 1567 |
| BspPI | GGATC | 4 cut(s) | 713, 1067, 1091, 1988 |
| BspT107I | GGYRCC | 5 cut(s) | 983, 1222, 1586, 2159, 2381 |
| BsrBI | CCGCTC | 1 cut(s) | 500 |
| BsrDI | GCAATG | 2 cut(s) | 69, 1141 |
| BsrGI | TGTACA | 2 cut(s) | 113, 648 |
| BssECI | CCNNGG | 3 cut(s) | 882, 2682, 2742 |
| BssNI | GRCGYC | 1 cut(s) | 1223 |
| BssT1I | CCWWGG | 2 cut(s) | 882, 2742 |
| Bst2UI | CCWGG | 2 cut(s) | 93, 919 |
| Bst4CI | ACNGT | 5 cut(s) | 53, 528, 1291, 1506, 1942 |
| Bst6I | CTCTTC | 1 cut(s) | 672 |
| BstACI | GRCGYC | 1 cut(s) | 1223 |
| BstAUI | TGTACA | 2 cut(s) | 113, 648 |
| BstC8I | GCNNGC | 6 cut(s) | 337, 341, 350, 540, 852, 1124 |
| BstDEI | CTNAG | 7 cut(s) | 7, 138, 455, 521, 826, 1007, 1458 |
| BstDSI | CCRYGG | 1 cut(s) | 2682 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2462 |
| BstF5I | GGATG | 1 cut(s) | 762 |
| BstH2I | RGCGCY | 1 cut(s) | 1226 |
| BstHHI | GCGC | 2 cut(s) | 804, 1225 |
| BstMAI | GTCTC | 2 cut(s) | 395, 2785 |
| BstMCI | CGRYCG | 1 cut(s) | 488 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 345, 349, 1874 |
| BstNI | CCWGG | 2 cut(s) | 93, 919 |
| BstNSI | RCATGY | 5 cut(s) | 190, 343, 542, 1126, 1200 |
| BstSCI | CCNGG | 2 cut(s) | 91, 917 |
| BstSFI | CTRYAG | 2 cut(s) | 873, 1563 |
| BstSLI | GKGCMC | 1 cut(s) | 692 |
| BstV1I | GCAGC | 4 cut(s) | 364, 442, 1280, 1577 |
| BstV2I | GAAGAC | 3 cut(s) | 245, 2051, 2665 |
| BstX2I | RGATCY | 5 cut(s) | 1072, 1096, 1528, 1980, 2515 |
| BstYI | RGATCY | 5 cut(s) | 1072, 1096, 1528, 1980, 2515 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1458 |
| BsuRI | GGCC | 7 cut(s) | 917, 1296, 1415, 1499, 1930, 2687, 2754 |
| BtgI | CCRYGG | 1 cut(s) | 2682 |
| BtgZI | GCGATG | 1 cut(s) | 370 |
| BtrI | CACGTC | 1 cut(s) | 2779 |
| BtsCI | GGATG | 1 cut(s) | 762 |
| BtsIMutI | CAGTG | 1 cut(s) | 406 |
| Cac8I | GCNNGC | 6 cut(s) | 337, 341, 350, 540, 852, 1124 |
| CfoI | GCGC | 2 cut(s) | 804, 1225 |
| Cfr13I | GGNCC | 1 cut(s) | 2455 |
| Csp6I | GTAC | 9 cut(s) | 114, 506, 649, 908, 984, 1616, 1733, 2160, 2382 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 382, 417, 2160, 2195, 2382, 2417 |
| CviQI | GTAC | 9 cut(s) | 114, 506, 649, 908, 984, 1616, 1733, 2160, 2382 |
| DdeI | CTNAG | 7 cut(s) | 7, 138, 455, 521, 826, 1007, 1458 |
| DinI | GGCGCC | 1 cut(s) | 1224 |
| DraI | TTTAAA | 1 cut(s) | 2325 |
| DraIII | CACNNNGTG | 1 cut(s) | 1506 |
| EaeI | YGGCCR | 3 cut(s) | 915, 1294, 1497 |
| Eam1104I | CTCTTC | 1 cut(s) | 672 |
| EarI | CTCTTC | 1 cut(s) | 672 |
| Eco130I | CCWWGG | 2 cut(s) | 882, 2742 |
| Eco147I | AGGCCT | 1 cut(s) | 1930 |
| Eco47I | GGWCC | 1 cut(s) | 2455 |
| Eco57I | CTGAAG | 5 cut(s) | 327, 382, 492, 882, 1758 |
| Eco81I | CCTNAGG | 1 cut(s) | 1458 |
| Eco88I | CYCGRG | 2 cut(s) | 723, 1768 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2462 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2455 |
| EcoRI | GAATTC | 1 cut(s) | 634 |
| EcoRII | CCWGG | 2 cut(s) | 91, 917 |
| EcoT14I | CCWWGG | 2 cut(s) | 882, 2742 |
| EcoT22I | ATGCAT | 1 cut(s) | 630 |
| EgeI | GGCGCC | 1 cut(s) | 1224 |
| EheI | GGCGCC | 1 cut(s) | 1224 |
| ErhI | CCWWGG | 2 cut(s) | 882, 2742 |
| Esp3I | CGTCTC | 1 cut(s) | 2785 |
| FaqI | GGGAC | 1 cut(s) | 2468 |
| FauNDI | CATATG | 1 cut(s) | 2503 |
| FbaI | TGATCA | 1 cut(s) | 2593 |
| Fnu4HI | GCNGC | 4 cut(s) | 353, 431, 1269, 1566 |
| FokI | GGATG | 1 cut(s) | 749 |
| Fsp4HI | GCNGC | 4 cut(s) | 353, 431, 1269, 1566 |
| FspBI | CTAG | 7 cut(s) | 83, 660, 897, 1611, 1859, 2021, 2519 |
| GlaI | GCGC | 2 cut(s) | 803, 1224 |
| GluI | GCNGC | 4 cut(s) | 353, 431, 1269, 1566 |
| HaeII | RGCGCY | 1 cut(s) | 1226 |
| HaeIII | GGCC | 7 cut(s) | 917, 1296, 1415, 1499, 1930, 2687, 2754 |
| HhaI | GCGC | 2 cut(s) | 804, 1225 |
| Hin1I | GRCGYC | 1 cut(s) | 1223 |
| Hin6I | GCGC | 2 cut(s) | 802, 1223 |
| HinP1I | GCGC | 2 cut(s) | 802, 1223 |
| HincII | GTYRAC | 1 cut(s) | 2137 |
| HindII | GTYRAC | 1 cut(s) | 2137 |
| HinfI | GANTC | 6 cut(s) | 11, 1442, 1484, 1958, 2096, 2318 |
| HphI | GGTGA | 6 cut(s) | 65, 283, 1073, 1274, 1297, 1961 |
| Hpy166II | GTNNAC | 8 cut(s) | 101, 323, 649, 690, 843, 868, 1733, 2137 |
| Hpy188III | TCNNGA | 6 cut(s) | 710, 1070, 1526, 1539, 2009, 2597 |
| Hpy8I | GTNNAC | 8 cut(s) | 101, 323, 649, 690, 843, 868, 1733, 2137 |
| Hpy99I | CGWCG | 1 cut(s) | 53 |
| HpyAV | CCTTC | 9 cut(s) | 356, 376, 752, 1276, 1405, 1733, 1786, 2674, 2744 |
| HpyCH4III | ACNGT | 5 cut(s) | 53, 528, 1291, 1506, 1942 |
| HpyCH4IV | ACGT | 4 cut(s) | 181, 656, 1394, 2778 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 345, 349, 1874 |
| HpyF3I | CTNAG | 7 cut(s) | 7, 138, 455, 521, 826, 1007, 1458 |
| HpySE526I | ACGT | 4 cut(s) | 181, 656, 1394, 2778 |
| Hsp92I | GRCGYC | 1 cut(s) | 1223 |
| HspAI | GCGC | 2 cut(s) | 802, 1223 |
| KasI | GGCGCC | 1 cut(s) | 1222 |
| KpnI | GGTACC | 3 cut(s) | 987, 2163, 2385 |
| Ksp22I | TGATCA | 1 cut(s) | 2593 |
| LmnI | GCTCC | 2 cut(s) | 1018, 1113 |
| Lsp1109I | GCAGC | 4 cut(s) | 364, 442, 1280, 1577 |
| LweI | GCATC | 2 cut(s) | 637, 771 |
| MaeI | CTAG | 7 cut(s) | 83, 660, 897, 1611, 1859, 2021, 2519 |
| MaeII | ACGT | 4 cut(s) | 181, 656, 1394, 2778 |
| MaeIII | GTNAC | 1 cut(s) | 1285 |
| MbiI | CCGCTC | 1 cut(s) | 500 |
| MfeI | CAATTG | 2 cut(s) | 1598, 1671 |
| MflI | RGATCY | 5 cut(s) | 1072, 1096, 1528, 1980, 2515 |
| MhlI | GDGCHC | 2 cut(s) | 692, 1800 |
| MlsI | TGGCCA | 2 cut(s) | 917, 1499 |
| MluNI | TGGCCA | 2 cut(s) | 917, 1499 |
| Mly113I | GGCGCC | 1 cut(s) | 1223 |
| MlyI | GAGTC | 3 cut(s) | 20, 1478, 1967 |
| MmeI | TCCRAC | 2 cut(s) | 580, 1795 |
| Mox20I | TGGCCA | 2 cut(s) | 917, 1499 |
| Mph1103I | ATGCAT | 1 cut(s) | 630 |
| MroXI | GAANNNNTTC | 2 cut(s) | 423, 480 |
| MscI | TGGCCA | 2 cut(s) | 917, 1499 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2055 |
| Msp20I | TGGCCA | 2 cut(s) | 917, 1499 |
| MspR9I | CCNGG | 2 cut(s) | 93, 919 |
| MunI | CAATTG | 2 cut(s) | 1598, 1671 |
| Mva1269I | GAATGC | 2 cut(s) | 2113, 2335 |
| MvaI | CCWGG | 2 cut(s) | 93, 919 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 345, 349, 1874 |
| NarI | GGCGCC | 1 cut(s) | 1223 |
| NdeI | CATATG | 1 cut(s) | 2503 |
| NlaIV | GGNNCC | 8 cut(s) | 90, 985, 1020, 1224, 1588, 2161, 2383, 2456 |
| NmuCI | GTSAC | 1 cut(s) | 1285 |
| NsiI | ATGCAT | 1 cut(s) | 630 |
| NspI | RCATGY | 5 cut(s) | 190, 343, 542, 1126, 1200 |
| PacI | TTAATTAA | 1 cut(s) | 1974 |
| PaeI | GCATGC | 3 cut(s) | 343, 542, 1126 |
| PaeR7I | CTCGAG | 2 cut(s) | 723, 1768 |
| PceI | AGGCCT | 1 cut(s) | 1930 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2690 |
| PctI | GAATGC | 2 cut(s) | 2113, 2335 |
| PdmI | GAANNNNTTC | 2 cut(s) | 423, 480 |
| PfeI | GAWTC | 3 cut(s) | 1442, 2096, 2318 |
| PkrI | GCNGC | 4 cut(s) | 354, 432, 1270, 1567 |
| Ple19I | CGATCG | 1 cut(s) | 488 |
| PleI | GAGTC | 3 cut(s) | 19, 1478, 1966 |
| PluTI | GGCGCC | 1 cut(s) | 1226 |
| PpsI | GAGTC | 3 cut(s) | 19, 1478, 1966 |
| PpuMI | RGGWCCY | 1 cut(s) | 2455 |
| PshBI | ATTAAT | 1 cut(s) | 1970 |
| PsiI | TTATAA | 2 cut(s) | 666, 2606 |
| Psp5II | RGGWCCY | 1 cut(s) | 2455 |
| Psp6I | CCWGG | 2 cut(s) | 91, 917 |
| PspGI | CCWGG | 2 cut(s) | 91, 917 |
| PspN4I | GGNNCC | 8 cut(s) | 90, 985, 1020, 1224, 1588, 2161, 2383, 2456 |
| PspPI | GGNCC | 1 cut(s) | 2455 |
| PspPPI | RGGWCCY | 1 cut(s) | 2455 |
| PspXI | VCTCGAGB | 2 cut(s) | 723, 1768 |
| PstI | CTGCAG | 1 cut(s) | 1567 |
| PsuI | RGATCY | 5 cut(s) | 1072, 1096, 1528, 1980, 2515 |
| PvuI | CGATCG | 1 cut(s) | 488 |
| RsaI | GTAC | 9 cut(s) | 115, 507, 650, 909, 985, 1617, 1734, 2161, 2383 |
| RsaNI | GTAC | 9 cut(s) | 114, 506, 649, 908, 984, 1616, 1733, 2160, 2382 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2055 |
| SatI | GCNGC | 4 cut(s) | 353, 431, 1269, 1566 |
| Sau96I | GGNCC | 1 cut(s) | 2455 |
| SchI | GAGTC | 3 cut(s) | 20, 1478, 1967 |
| ScrFI | CCNGG | 2 cut(s) | 93, 919 |
| SduI | GDGCHC | 2 cut(s) | 692, 1800 |
| SfaNI | GCATC | 2 cut(s) | 637, 771 |
| SfcI | CTRYAG | 2 cut(s) | 873, 1563 |
| SfoI | GGCGCC | 1 cut(s) | 1224 |
| Sfr274I | CTCGAG | 2 cut(s) | 723, 1768 |
| SinI | GGWCC | 1 cut(s) | 2455 |
| SlaI | CTCGAG | 2 cut(s) | 723, 1768 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2055 |
| SmlI | CTYRAG | 2 cut(s) | 723, 1768 |
| SmoI | CTYRAG | 2 cut(s) | 723, 1768 |
| SpeI | ACTAGT | 1 cut(s) | 82 |
| SphI | GCATGC | 3 cut(s) | 343, 542, 1126 |
| SseBI | AGGCCT | 1 cut(s) | 1930 |
| SsiI | CCGC | 3 cut(s) | 428, 498, 838 |
| SspDI | GGCGCC | 1 cut(s) | 1222 |
| SspI | AATATT | 3 cut(s) | 1421, 2122, 2344 |
| SspMI | CTAG | 7 cut(s) | 83, 660, 897, 1611, 1859, 2021, 2519 |
| StuI | AGGCCT | 1 cut(s) | 1930 |
| StyD4I | CCNGG | 2 cut(s) | 91, 917 |
| StyI | CCWWGG | 2 cut(s) | 882, 2742 |
| TaaI | ACNGT | 5 cut(s) | 53, 528, 1291, 1506, 1942 |
| TaiI | ACGT | 4 cut(s) | 184, 659, 1397, 2781 |
| TaqI | TCGA | 7 cut(s) | 484, 488, 724, 1436, 1769, 2574, 2738 |
| TaqII | GACCGA | 1 cut(s) | 62 |
| TatI | WGTACW | 3 cut(s) | 113, 505, 648 |
| TfiI | GAWTC | 3 cut(s) | 1442, 2096, 2318 |
| TscAI | CASTG | 1 cut(s) | 406 |
| TseFI | GTSAC | 1 cut(s) | 1285 |
| TseI | GCWGC | 4 cut(s) | 352, 430, 1268, 1565 |
| Tsp45I | GTSAC | 1 cut(s) | 1285 |
| TspGWI | ACGGA | 1 cut(s) | 572 |
| TspRI | CASTG | 1 cut(s) | 406 |
| VneI | GTGCAC | 1 cut(s) | 688 |
| VpaK11BI | GGWCC | 1 cut(s) | 2455 |
| VspI | ATTAAT | 1 cut(s) | 1970 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2462 |
| XapI | RAATTY | 7 cut(s) | 634, 1323, 1490, 1712, 2246, 2468, 2710 |
| XceI | RCATGY | 5 cut(s) | 190, 343, 542, 1126, 1200 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1628 |
| XhoI | CTCGAG | 2 cut(s) | 723, 1768 |
| XmnI | GAANNNNTTC | 2 cut(s) | 423, 480 |
| XspI | CTAG | 7 cut(s) | 83, 660, 897, 1611, 1859, 2021, 2519 |
| Zsp2I | ATGCAT | 1 cut(s) | 630 |