Ulp1 protease family, C-terminal catalytic domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 344 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 298, 488 |
| AgsI | TTSAA | 7 cut(s) | 44, 100, 136, 158, 223, 277, 429 |
| AluBI | AGCT | 5 cut(s) | 30, 52, 93, 386, 423 |
| AluI | AGCT | 5 cut(s) | 30, 52, 93, 386, 423 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 56, 88 |
| AseI | ATTAAT | 1 cut(s) | 309 |
| AsuHPI | GGTGA | 1 cut(s) | 313 |
| BanI | GGYRCC | 1 cut(s) | 344 |
| BauI | CACGAG | 1 cut(s) | 483 |
| BccI | CCATC | 2 cut(s) | 102, 335 |
| BclI | TGATCA | 1 cut(s) | 403 |
| BmiI | GGNNCC | 1 cut(s) | 346 |
| BsaBI | GATNNNNATC | 1 cut(s) | 408 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 298, 488 |
| Bse1I | ACTGG | 1 cut(s) | 394 |
| Bse8I | GATNNNNATC | 1 cut(s) | 408 |
| BseGI | GGATG | 2 cut(s) | 113, 276 |
| BseJI | GATNNNNATC | 1 cut(s) | 408 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 298, 488 |
| BseMII | CTCAG | 1 cut(s) | 205 |
| BseNI | ACTGG | 1 cut(s) | 394 |
| BsgI | GTGCAG | 1 cut(s) | 458 |
| BshNI | GGYRCC | 1 cut(s) | 344 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 298, 488 |
| Bsp143I | GATC | 2 cut(s) | 357, 403 |
| BspCNI | CTCAG | 1 cut(s) | 204 |
| BspLI | GGNNCC | 1 cut(s) | 346 |
| BspT107I | GGYRCC | 1 cut(s) | 344 |
| BsrI | ACTGG | 1 cut(s) | 394 |
| BssMI | GATC | 2 cut(s) | 357, 403 |
| BssSI | CACGAG | 1 cut(s) | 483 |
| Bst2BI | CACGAG | 1 cut(s) | 483 |
| Bst4CI | ACNGT | 2 cut(s) | 10, 130 |
| BstDEI | CTNAG | 2 cut(s) | 26, 191 |
| BstF5I | GGATG | 2 cut(s) | 113, 276 |
| BstKTI | GATC | 2 cut(s) | 360, 406 |
| BstMBI | GATC | 2 cut(s) | 357, 403 |
| BtsCI | GGATG | 2 cut(s) | 113, 276 |
| BtsIMutI | CAGTG | 1 cut(s) | 78 |
| CviAII | CATG | 3 cut(s) | 187, 297, 413 |
| CviJI | RGCY | 6 cut(s) | 30, 52, 93, 317, 386, 423 |
| CviKI_1 | RGCY | 6 cut(s) | 30, 52, 93, 317, 386, 423 |
| DdeI | CTNAG | 2 cut(s) | 26, 191 |
| DpnI | GATC | 2 cut(s) | 359, 405 |
| DpnII | GATC | 2 cut(s) | 357, 403 |
| FaeI | CATG | 3 cut(s) | 190, 300, 416 |
| FaiI | YATR | 5 cut(s) | 188, 200, 210, 298, 414 |
| FatI | CATG | 3 cut(s) | 186, 296, 412 |
| FbaI | TGATCA | 1 cut(s) | 403 |
| FokI | GGATG | 2 cut(s) | 120, 283 |
| Hin1II | CATG | 3 cut(s) | 190, 300, 416 |
| HinfI | GANTC | 1 cut(s) | 236 |
| HphI | GGTGA | 1 cut(s) | 313 |
| Hpy188I | TCNGA | 1 cut(s) | 194 |
| Hpy188III | TCNNGA | 3 cut(s) | 100, 361, 507 |
| Hpy99I | CGWCG | 1 cut(s) | 252 |
| HpyCH4III | ACNGT | 2 cut(s) | 10, 130 |
| HpyCH4V | TGCA | 3 cut(s) | 16, 256, 439 |
| HpyF3I | CTNAG | 2 cut(s) | 26, 191 |
| Hsp92II | CATG | 3 cut(s) | 190, 300, 416 |
| Ksp22I | TGATCA | 1 cut(s) | 403 |
| Kzo9I | GATC | 2 cut(s) | 357, 403 |
| LpnPI | CCDG | 1 cut(s) | 375 |
| MalI | GATC | 2 cut(s) | 359, 405 |
| MboI | GATC | 2 cut(s) | 357, 403 |
| MboII | GAAGA | 1 cut(s) | 383 |
| MluCI | AATT | 2 cut(s) | 306, 375 |
| MnlI | CCTC | 3 cut(s) | 307, 460, 492 |
| MseI | TTAA | 1 cut(s) | 309 |
| NdeII | GATC | 2 cut(s) | 357, 403 |
| NlaIII | CATG | 3 cut(s) | 190, 300, 416 |
| NlaIV | GGNNCC | 1 cut(s) | 346 |
| PfeI | GAWTC | 1 cut(s) | 236 |
| PshBI | ATTAAT | 1 cut(s) | 309 |
| PspN4I | GGNNCC | 1 cut(s) | 346 |
| SaqAI | TTAA | 1 cut(s) | 309 |
| Sau3AI | GATC | 2 cut(s) | 357, 403 |
| SetI | ASST | 6 cut(s) | 32, 54, 95, 388, 425, 452 |
| Sse9I | AATT | 2 cut(s) | 306, 375 |
| SspI | AATATT | 1 cut(s) | 72 |
| TaaI | ACNGT | 2 cut(s) | 10, 130 |
| TaqI | TCGA | 2 cut(s) | 171, 508 |
| TasI | AATT | 2 cut(s) | 306, 375 |
| TfiI | GAWTC | 1 cut(s) | 236 |
| Tru1I | TTAA | 1 cut(s) | 309 |
| Tru9I | TTAA | 1 cut(s) | 309 |
| TscAI | CASTG | 1 cut(s) | 85 |
| TspDTI | ATGAA | 4 cut(s) | 111, 175, 342, 396 |
| TspGWI | ACGGA | 1 cut(s) | 207 |
| TspRI | CASTG | 1 cut(s) | 85 |
| VspI | ATTAAT | 1 cut(s) | 309 |