Rh1BG157000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0000268
Physical Location & Seq
Reverse (-)
25515884 .. 25522247
6364 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG157000.1

Sequence Viewer

Length: 1950 bp
ATGGAGAGTGGAAGTGACATGAATCATCTGCAATATAATTGTGTTAGATTTGATAGATTGTCTGCGAATGATGTTCTAGGCAAGGAGTTTAAATCTGTTGAGGAAGCAGAGATCTTTTATTTTGCTTACGCCAAGGCAATGGGGTTTGATGTTAGAAAGGATGACAAGTATGTAAGTGCAAGGACGGGGAGAGTCACAATCCGTCAATTGGTTTGTTCTGCACAAGGGAAGAGACGGGAGGAATATATGAACAACAGCAACAAGGTCCGTATGCCAAAAAAATTGACAAGGTGTAATTGTCCATGTTTGTTCAAGACTATGGCGCTAGCGAAAAAAAGAAGGGTCCGTGACAATGAAGACAGTAATGGTCGAGAAAATAAGGAAGAGAAAGTGGTTGTTGGTCGATATACCTTCAACCGATATTTGAAAACCCAAGCGGAAGAGAGAAATATCAAGATAGATAATGAGTTCAGGAAAGCAATCGCTTTGAAATGGCATACACTTGATCCCACTGAGAAGGCAAAGTTTTTTGTTCCAAGCGCGCATGCTTCAAATGCAACTCCTAAAGCCAATGAGGATTTGTCCAAACGTTCAGCAACTTTGTTAACTCGATGTAGTCCACAGAGATTTCATGATATTGTTTCCCGATTTTCGGATGATCAAATTAACGCAATAAAAGAAATGGGATTCGGCACGTTGGTGCAATTATCATGTACCAGGTTACGTCGTGATTTTTGTCGCTTATTGATCTGCCATTTTGACACTGAAGCTTGTACTATTGAGCTGCATGGTAAGACGCGAAAAATTTCTTCATCAGACTTTGAACAAATTATGTGTGTGCCAGAAGGAGGATCAAGTGTTGACCTTAGAGGCTCAATCCAAGACGATGACGTGAAACCATGGCATGATTTTTATTTTGGGACATCTGAATACATATCAATTGCAGGCCTAATTAAGAAGCTAGAAGAAGCAAAAACAGTAGATGACAACTTCAGAGTCGGCTTCATGTTATTGGCCATTGGTACCTTGCTTTGCCCCAATACTTCAATGAACATCCACTCGAAGTACCTTATACCACTAAGGGATCCGAAAAGGATAAACTCTCTAAATTGGGCGAGTTTTTCGTTCAAATTTCTTGTAGACGGAGTGCGTTCATTCAAGCAGAAAAAATCAATGTGCTTGTGTGGGTGTGTCCTATTTTTTCAGCTTTATTATTACAACAGTATTGCCCATGGGAGGACAATTATCGATTGTTCAAAGCCTGTGGTTGCTGCCTGGGAAGACGTAAAGTCATCAAAACTACTTAAATGGATCTCGAGGAAAGGCGGTCTTCAGAGTTCTGCTATTAATCTTGTTTCTAACATTGATGGTGTAATGGGAAACAAGCATGGGGTGGTAGATGCATTTTCAGTGACAGCAGATGTGGAGCTTTTGAAAAATGTTGTTAGTCGCATTGAGAAATCAGTTGAAGAACTCAAAAATATTGTTGTTGATACTGTCCCTACAAAAGTTGTGGAAGAGCTGAGGGGATTAAAAGAATTTTTGAAGTCATTAAAGGTGGGCGTCAATGATGGTGTGGAAAAGGAAGGAGAAGACATTGAACAGAAAAACGGAGACACGTTTGCAAATCAGAAACATTATCGACACATGCAGAGCCCAGATAGATCATCTTGCCAAATGCTCAGCCCCGACAATCGGCCACAATACACAGAGGCTAACGAACCCCAAGTCGGTATTAAAAACATTAAGAAAGAGATTTCATCGCCTGAACTCAGTCCAGATCCCCTTTTGGAGTACGGTGATAAAATAGAACGTCTAACCGCACAACTTTTACATGAAAAGCCGAGAAAGATACAAGATATTGGTCCTTTTAAAGGGTGTCGTGACCTTTCCAATGAAGAAGTAGATCTAATAGCTTTCATATATCTCGAAGTCTGGAATGAAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

649

Amino Acids

74.05

Weight (kDa)

8.67

Isoelectric Point (pI)

43.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 39 - 103 3.9e-10 FAR1 DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000268)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23642 FvH4_2g09911 FvH4_2g09911 FvH4_2g09911 FvH4_3g18421 FvH4_4g05321 FvH4_6g28332 FvH4_7g31231
prunus_persica Prupe.2G063700_v2.0.a1 Prupe.5G238300_v2.0.a1 Prupe.6G153700_v2.0.a1 Prupe.7G017400_v2.0.a1 Prupe.7G070100_v2.0.a1 Prupe.7G070100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0345471 RchiOBHm_Chr1g0366901 RchiOBHm_Chr2g0162601 RchiOBHm_Chr6g0266661 RchiOBHm_Chr6g0266671
rosa_laevigata RLG00000005047 RLG00000007971 RLG00000008530 RLG00000009009 RLG00000009046 RLG00000014086 RLG00000017162 RLG00000017163 RLG00000017440 RLG00000019098 RLG00000022623 RLG00000024566 RLG00000027733 RLG00000029878 RLG00000029945 RLG00000030127 RLG00000030157 RLG00000031078 RLG00000031080 RLG00000034338 RLG00000034670
rosa_multiflora Rmu_sc0002106.1_g000007 Rmu_sc0002531.1_g000064 Rmu_sc0003433.1_g000005 Rmu_sc0004704.1_g000001 Rmu_sc0004704.1_g000002 Rmu_sc0004888.1_g000042 Rmu_sc0005599.1_g000031 Rmu_sc0006413.1_g000014 Rmu_sc0006413.1_g000018
rosa_roxburghii Rroxscaffold_1G00031940 Rroxscaffold_1G00032500 Rroxscaffold_1G00074770 Rroxscaffold_1G00074780 Rroxscaffold_1G00075150 Rroxscaffold_2G00125060 Rroxscaffold_2G00125070 Rroxscaffold_2G00125800 Rroxscaffold_2G00125820 Rroxscaffold_2G00139560 Rroxscaffold_2G00140550 Rroxscaffold_4G00314090 Rroxscaffold_6G00390050 Rroxscaffold_6G00390520 Rroxscaffold_6G00390530 Rroxscaffold_6G00428030 Rroxscaffold_7G00201570 Rroxscaffold_7G00201580 Rroxscaffold_7G00207070 Rroxscaffold_7G00207080 Rroxscaffold_7G00207240
rosa_rugosa Rorug01G0408000 Rorug01G0408100 Rorug01G0408100 Rorug01G0408200 Rorug02G0155200 Rorug02G0181500 Rorug02G0288400 Rorug03G0208600 Rorug03G0272300 Rorug06G0005500 Rorug06G0005600 Rorug06G0026300.1 Rorug06G0026400 Rorug06G0026500 Rorug06G0026600 Rorug06G0026600 Rorug06G0026600 Rorug06G0145800 Rorug07G0305200
rosa_samantha Rh1AG062100 Rh1BG131900 Rh1BG157000 Rh1CG021100 Rh1CG321600 Rh1DG188200 Rh2DG388300 Rh3AG320500 Rh3BG355400 Rh3CG352400 Rh3CG353200 Rh4AG045800 Rh4DG171700 Rh5AG196000 Rh5AG196100 Rh5CG346800 Rh6BG147600 Rh6BG147700 Rh6CG143200 Rh6CG143500 Rh6CG174600 Rh6CG391800 Rh6DG132100 Rh6DG132300 Rh6DG167100 Rh6DG167200 Rh7AG211600 Rh7BG307000 Rh7BG307300 Rh7BG398300
rosa_wichuraiana Rw0G001830 Rw0G001840 Rw0G018160 Rw0G018170 Rw3G028040 Rw5G017860 Rw5G026710 Rw6G012630 Rw6G012650 Rw6G012780 Rw6G012800 Rw7G019130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1022
AccB1I GGYRCC 1 cut(s) 1022
AccI GTMKAC 1 cut(s) 1140
AccII CGCG 2 cut(s) 542, 799
AciI CCGC 3 cut(s) 437, 1326, 1821
AclI AACGTT 1 cut(s) 589
AclWI GGATC 6 cut(s) 500, 859, 1079, 1092, 1319, 1775
AcoI YGGCCR 2 cut(s) 1014, 1697
AcsI RAATTY 3 cut(s) 804, 1130, 1538
AcuI CTGAAG 3 cut(s) 786, 976, 1316
AcyI GRCGYC 1 cut(s) 1563
AfaI GTAC 5 cut(s) 715, 775, 1024, 1067, 1796
AfiI CCNNNNNNNGG 7 cut(s) 208, 652, 848, 1236, 1695, 1730, 1874
AflIII ACRYGT 1 cut(s) 1617
AhdI GACNNNNNGTC 1 cut(s) 1288
AjiI CACGTC 1 cut(s) 892
AjnI CCWGG 2 cut(s) 716, 1274
AleI CACNNNNGTG 1 cut(s) 698
AluBI AGCT 7 cut(s) 770, 784, 961, 1207, 1429, 1522, 1916
AluI AGCT 7 cut(s) 770, 784, 961, 1207, 1429, 1522, 1916
Alw26I GTCTC 2 cut(s) 226, 1608
AlwI GGATC 6 cut(s) 500, 859, 1079, 1092, 1319, 1775
Ama87I CYCGRG 1 cut(s) 1315
AoxI GGCC 3 cut(s) 946, 1014, 1697
ApeKI GCWGC 2 cut(s) 784, 1271
ApoI RAATTY 3 cut(s) 804, 1130, 1538
ArsI GACNNNNNNTTYG 2 cut(s) 1713, 1745
AseI ATTAAT 1 cut(s) 1347
Asp700I GAANNNNTTC 1 cut(s) 805
Asp718I GGTACC 1 cut(s) 1022
AspLEI GCGC 3 cut(s) 325, 542, 544
AspS9I GGNCC 3 cut(s) 265, 343, 1865
AsuHPI GGTGA 1 cut(s) 1811
AsuNHI GCTAGC 1 cut(s) 325
AvaI CYCGRG 1 cut(s) 1315
AvaII GGWCC 3 cut(s) 265, 343, 1865
BalI TGGCCA 1 cut(s) 1016
BamHI GGATCC 1 cut(s) 1084
BanI GGYRCC 1 cut(s) 1022
BanII GRGCYC 1 cut(s) 1658
BbsI GAAGAC 4 cut(s) 363, 1287, 1322, 1599
BbvCI CCTCAGC 1 cut(s) 1523
BbvI GCAGC 2 cut(s) 771, 1258
BccI CCATC 2 cut(s) 1361, 1565
BciT130I CCWGG 2 cut(s) 718, 1276
BclI TGATCA 1 cut(s) 658
BcoDI GTCTC 2 cut(s) 226, 1608
BfaI CTAG 3 cut(s) 77, 326, 962
BfoI RGCGCY 1 cut(s) 326
BglII AGATCT 2 cut(s) 111, 1906
BisI GCNGC 2 cut(s) 785, 1272
BlpI GCTNAGC 1 cut(s) 1682
BlsI GCNGC 2 cut(s) 786, 1273
Bme1390I CCNGG 2 cut(s) 718, 1276
Bme18I GGWCC 3 cut(s) 265, 343, 1865
BmeRI GACNNNNNGTC 1 cut(s) 1288
BmeT110I CYCGRG 1 cut(s) 1315
BmgBI CACGTC 1 cut(s) 892
BmgT120I GGNCC 3 cut(s) 265, 343, 1865
BmiI GGNNCC 3 cut(s) 344, 1024, 1086
BmrFI CCNGG 2 cut(s) 718, 1276
BmsI GCATC 1 cut(s) 1390
BmtI GCTAGC 1 cut(s) 329
BpiI GAAGAC 4 cut(s) 363, 1287, 1322, 1599
Bpu10I CCTNAGC 1 cut(s) 1523
Bpu1102I GCTNAGC 1 cut(s) 1682
Bsa29I ATCGAT 1 cut(s) 1248
BsaHI GRCGYC 1 cut(s) 1563
BsaJI CCNNGG 4 cut(s) 132, 899, 1231, 1275
Bsc4I CCNNNNNNNGG 7 cut(s) 208, 652, 848, 1236, 1695, 1730, 1874
Bse3DI GCAATG 1 cut(s) 144
BseBI CCWGG 2 cut(s) 718, 1276
BseCI ATCGAT 1 cut(s) 1248
BseDI CCNNGG 4 cut(s) 132, 899, 1231, 1275
BseGI GGATG 3 cut(s) 166, 661, 1053
BseLI CCNNNNNNNGG 7 cut(s) 208, 652, 848, 1236, 1695, 1730, 1874
BseMI GCAATG 1 cut(s) 144
BseMII CTCAG 4 cut(s) 504, 1514, 1696, 1786
BsePI GCGCGC 1 cut(s) 540
BseXI GCAGC 2 cut(s) 771, 1258
BsgI GTGCAG 1 cut(s) 204
Bsh1236I CGCG 2 cut(s) 542, 799
BshFI GGCC 3 cut(s) 948, 1016, 1699
BshNI GGYRCC 1 cut(s) 1022
BshVI ATCGAT 1 cut(s) 1248
BsiHKCI CYCGRG 1 cut(s) 1315
BslFI GGGAC 2 cut(s) 934, 1484
BslI CCNNNNNNNGG 7 cut(s) 208, 652, 848, 1236, 1695, 1730, 1874
BsmAI GTCTC 2 cut(s) 226, 1608
BsmBI CGTCTC 1 cut(s) 226
BsmFI GGGAC 2 cut(s) 934, 1484
BsnI GGCC 3 cut(s) 948, 1016, 1699
BsoBI CYCGRG 1 cut(s) 1315
Bsp1286I GDGCHC 1 cut(s) 1658
Bsp1720I GCTNAGC 1 cut(s) 1682
Bsp19I CCATGG 2 cut(s) 899, 1231
BspACI CCGC 3 cut(s) 437, 1326, 1821
BspANI GGCC 3 cut(s) 948, 1016, 1699
BspCNI CTCAG 4 cut(s) 505, 1515, 1695, 1785
BspDI ATCGAT 1 cut(s) 1248
BspFNI CGCG 2 cut(s) 542, 799
BspHI TCATGA 1 cut(s) 631
BspLI GGNNCC 3 cut(s) 344, 1024, 1086
BspOI GCTAGC 1 cut(s) 329
BspPI GGATC 6 cut(s) 500, 859, 1079, 1092, 1319, 1775
BspQI GCTCTTC 1 cut(s) 1512
BspT107I GGYRCC 1 cut(s) 1022
BsrDI GCAATG 1 cut(s) 144
BssECI CCNNGG 4 cut(s) 132, 899, 1231, 1275
BssHII GCGCGC 1 cut(s) 540
BssNI GRCGYC 1 cut(s) 1563
BssT1I CCWWGG 3 cut(s) 132, 899, 1231
Bst2UI CCWGG 2 cut(s) 718, 1276
Bst4CI ACNGT 5 cut(s) 362, 979, 1223, 1498, 1799
Bst6I CTCTTC 5 cut(s) 224, 378, 435, 1512, 1938
BstACI GRCGYC 1 cut(s) 1563
BstC8I GCNNGC 4 cut(s) 327, 542, 546, 946
BstDEI CTNAG 6 cut(s) 513, 866, 1079, 1523, 1682, 1772
BstDSI CCRYGG 2 cut(s) 899, 1231
BstENI CCTNNNNNAGG 1 cut(s) 1872
BstF5I GGATG 3 cut(s) 166, 661, 1053
BstFNI CGCG 2 cut(s) 542, 799
BstH2I RGCGCY 1 cut(s) 326
BstHHI GCGC 3 cut(s) 325, 542, 544
BstMAI GTCTC 2 cut(s) 226, 1608
BstMWI GCNNNNNNNGC 1 cut(s) 554
BstNI CCWGG 2 cut(s) 718, 1276
BstNSI RCATGY 2 cut(s) 548, 1651
BstSCI CCNGG 2 cut(s) 716, 1274
BstUI CGCG 2 cut(s) 542, 799
BstV1I GCAGC 2 cut(s) 771, 1258
BstV2I GAAGAC 4 cut(s) 363, 1287, 1322, 1599
BstX2I RGATCY 5 cut(s) 111, 1084, 1311, 1780, 1906
BstXI CCANNNNNNTGG 1 cut(s) 139
BstYI RGATCY 5 cut(s) 111, 1084, 1311, 1780, 1906
Bsu15I ATCGAT 1 cut(s) 1248
BsuRI GGCC 3 cut(s) 948, 1016, 1699
BsuTUI ATCGAT 1 cut(s) 1248
BtgI CCRYGG 2 cut(s) 899, 1231
BtgZI GCGATG 1 cut(s) 1746
BtrI CACGTC 1 cut(s) 892
BtsCI GGATG 3 cut(s) 166, 661, 1053
BtsIMutI CAGTG 3 cut(s) 510, 762, 1416
Cac8I GCNNGC 4 cut(s) 327, 542, 546, 946
CciI TCATGA 1 cut(s) 631
CfoI GCGC 3 cut(s) 325, 542, 544
Cfr13I GGNCC 3 cut(s) 265, 343, 1865
ClaI ATCGAT 1 cut(s) 1248
CseI GACGC 2 cut(s) 805, 1552
CsiI ACCWGGT 1 cut(s) 716
Csp6I GTAC 5 cut(s) 714, 774, 1023, 1066, 1795
CspCI CAANNNNNGTGG 4 cut(s) 1245, 1280, 1494, 1529
CviQI GTAC 5 cut(s) 714, 774, 1023, 1066, 1795
DdeI CTNAG 6 cut(s) 513, 866, 1079, 1523, 1682, 1772
DraI TTTAAA 2 cut(s) 91, 1873
DriI GACNNNNNGTC 1 cut(s) 1288
EaeI YGGCCR 2 cut(s) 1014, 1697
Eam1104I CTCTTC 5 cut(s) 224, 378, 435, 1512, 1938
Eam1105I GACNNNNNGTC 1 cut(s) 1288
EarI CTCTTC 5 cut(s) 224, 378, 435, 1512, 1938
Eco130I CCWWGG 3 cut(s) 132, 899, 1231
Eco147I AGGCCT 1 cut(s) 948
Eco24I GRGCYC 1 cut(s) 1658
Eco47I GGWCC 3 cut(s) 265, 343, 1865
Eco57I CTGAAG 3 cut(s) 786, 976, 1316
Eco88I CYCGRG 1 cut(s) 1315
EcoNI CCTNNNNNAGG 1 cut(s) 1872
EcoRII CCWGG 2 cut(s) 716, 1274
EcoT14I CCWWGG 3 cut(s) 132, 899, 1231
EcoT22I ATGCAT 1 cut(s) 1405
EcoT38I GRGCYC 1 cut(s) 1658
ErhI CCWWGG 3 cut(s) 132, 899, 1231
Esp3I CGTCTC 1 cut(s) 226
FalI AAGNNNNNCTT 2 cut(s) 1314, 1346
FaqI GGGAC 2 cut(s) 934, 1484
FbaI TGATCA 1 cut(s) 658
FblI GTMKAC 1 cut(s) 1140
Fnu4HI GCNGC 2 cut(s) 785, 1272
FokI GGATG 3 cut(s) 173, 668, 1040
FriOI GRGCYC 1 cut(s) 1658
Fsp4HI GCNGC 2 cut(s) 785, 1272
FspBI CTAG 3 cut(s) 77, 326, 962
GlaI GCGC 3 cut(s) 324, 541, 543
GluI GCNGC 2 cut(s) 785, 1272
HaeII RGCGCY 1 cut(s) 326
HaeIII GGCC 3 cut(s) 948, 1016, 1699
HgaI GACGC 2 cut(s) 805, 1552
HhaI GCGC 3 cut(s) 325, 542, 544
Hin1I GRCGYC 1 cut(s) 1563
Hin6I GCGC 3 cut(s) 323, 540, 542
HinP1I GCGC 3 cut(s) 323, 540, 542
HincII GTYRAC 2 cut(s) 606, 862
HindII GTYRAC 2 cut(s) 606, 862
HindIII AAGCTT 1 cut(s) 768
HinfI GANTC 4 cut(s) 22, 192, 687, 996
HpaI GTTAAC 1 cut(s) 606
HphI GGTGA 1 cut(s) 1811
Hpy166II GTNNAC 4 cut(s) 606, 620, 862, 1141
Hpy188I TCNGA 7 cut(s) 655, 817, 928, 995, 1089, 1335, 1632
Hpy8I GTNNAC 4 cut(s) 606, 620, 862, 1141
Hpy99I CGWCG 1 cut(s) 729
HpyAV CCTTC 5 cut(s) 333, 421, 511, 839, 1580
HpyCH4III ACNGT 5 cut(s) 362, 979, 1223, 1498, 1799
HpyCH4IV ACGT 7 cut(s) 589, 695, 724, 891, 1284, 1619, 1813
HpyF10VI GCNNNNNNNGC 1 cut(s) 554
HpyF3I CTNAG 6 cut(s) 513, 866, 1079, 1523, 1682, 1772
HpySE526I ACGT 7 cut(s) 589, 695, 724, 891, 1284, 1619, 1813
Hsp92I GRCGYC 1 cut(s) 1563
HspAI GCGC 3 cut(s) 323, 540, 542
KpnI GGTACC 1 cut(s) 1026
Ksp22I TGATCA 1 cut(s) 658
KspAI GTTAAC 1 cut(s) 606
LguI GCTCTTC 1 cut(s) 1512
LmnI GCTCC 1 cut(s) 1426
Lsp1109I GCAGC 2 cut(s) 771, 1258
LweI GCATC 1 cut(s) 1390
MabI ACCWGGT 1 cut(s) 716
MaeI CTAG 3 cut(s) 77, 326, 962
MaeII ACGT 7 cut(s) 589, 695, 724, 891, 1284, 1619, 1813
MaeIII GTNAC 6 cut(s) 14, 193, 347, 720, 1411, 1883
MfeI CAATTG 2 cut(s) 206, 939
MflI RGATCY 5 cut(s) 111, 1084, 1311, 1780, 1906
MhlI GDGCHC 1 cut(s) 1658
MlsI TGGCCA 1 cut(s) 1016
MluNI TGGCCA 1 cut(s) 1016
MlyI GAGTC 2 cut(s) 201, 1005
MnlI CCTC 9 cut(s) 94, 232, 568, 842, 863, 1230, 1311, 1518, 1705
Mox20I TGGCCA 1 cut(s) 1016
Mph1103I ATGCAT 1 cut(s) 1405
MroXI GAANNNNTTC 1 cut(s) 805
MscI TGGCCA 1 cut(s) 1016
MslI CAYNNNNRTG 1 cut(s) 698
Msp20I TGGCCA 1 cut(s) 1016
MspR9I CCNGG 2 cut(s) 718, 1276
MunI CAATTG 2 cut(s) 206, 939
MvaI CCWGG 2 cut(s) 718, 1276
MvnI CGCG 2 cut(s) 542, 799
MwoI GCNNNNNNNGC 1 cut(s) 554
NcoI CCATGG 2 cut(s) 899, 1231
NheI GCTAGC 1 cut(s) 325
NlaIV GGNNCC 3 cut(s) 344, 1024, 1086
NmeAIII GCCGAG 1 cut(s) 1869
NmuCI GTSAC 5 cut(s) 14, 193, 347, 1411, 1883
NsiI ATGCAT 1 cut(s) 1405
NspI RCATGY 2 cut(s) 548, 1651
OliI CACNNNNGTG 1 cut(s) 698
PaeI GCATGC 1 cut(s) 548
PaeR7I CTCGAG 1 cut(s) 1315
PagI TCATGA 1 cut(s) 631
PauI GCGCGC 1 cut(s) 540
PceI AGGCCT 1 cut(s) 948
PciSI GCTCTTC 1 cut(s) 1512
PdmI GAANNNNTTC 1 cut(s) 805
PfeI GAWTC 2 cut(s) 22, 687
PkrI GCNGC 2 cut(s) 786, 1273
PleI GAGTC 2 cut(s) 200, 1004
PpsI GAGTC 2 cut(s) 200, 1004
PshBI ATTAAT 1 cut(s) 1347
Psp1406I AACGTT 1 cut(s) 589
Psp6I CCWGG 2 cut(s) 716, 1274
PspGI CCWGG 2 cut(s) 716, 1274
PspN4I GGNNCC 3 cut(s) 344, 1024, 1086
PspPI GGNCC 3 cut(s) 265, 343, 1865
PsuI RGATCY 5 cut(s) 111, 1084, 1311, 1780, 1906
PteI GCGCGC 1 cut(s) 540
RsaI GTAC 5 cut(s) 715, 775, 1024, 1067, 1796
RsaNI GTAC 5 cut(s) 714, 774, 1023, 1066, 1795
RseI CAYNNNNRTG 1 cut(s) 698
SapI GCTCTTC 1 cut(s) 1512
SatI GCNGC 2 cut(s) 785, 1272
Sau96I GGNCC 3 cut(s) 265, 343, 1865
SchI GAGTC 2 cut(s) 201, 1005
ScrFI CCNGG 2 cut(s) 718, 1276
SduI GDGCHC 1 cut(s) 1658
SexAI ACCWGGT 1 cut(s) 716
SfaNI GCATC 1 cut(s) 1390
Sfr274I CTCGAG 1 cut(s) 1315
SinI GGWCC 3 cut(s) 265, 343, 1865
SlaI CTCGAG 1 cut(s) 1315
SmiMI CAYNNNNRTG 1 cut(s) 698
SmlI CTYRAG 1 cut(s) 1315
SmoI CTYRAG 1 cut(s) 1315
SphI GCATGC 1 cut(s) 548
SseBI AGGCCT 1 cut(s) 948
SsiI CCGC 3 cut(s) 437, 1326, 1821
SspI AATATT 1 cut(s) 1483
SspMI CTAG 3 cut(s) 77, 326, 962
StuI AGGCCT 1 cut(s) 948
StyD4I CCNGG 2 cut(s) 716, 1274
StyI CCWWGG 3 cut(s) 132, 899, 1231
TaaI ACNGT 5 cut(s) 362, 979, 1223, 1498, 1799
TaiI ACGT 7 cut(s) 592, 698, 727, 894, 1287, 1622, 1816
TaqI TCGA 8 cut(s) 370, 403, 610, 1061, 1248, 1316, 1642, 1929
TatI WGTACW 1 cut(s) 773
TfiI GAWTC 2 cut(s) 22, 687
TscAI CASTG 3 cut(s) 517, 769, 1416
TseFI GTSAC 5 cut(s) 14, 193, 347, 1411, 1883
TseI GCWGC 2 cut(s) 784, 1271
Tsp45I GTSAC 5 cut(s) 14, 193, 347, 1411, 1883
TspGWI ACGGA 5 cut(s) 191, 257, 335, 1158, 1626
TspRI CASTG 3 cut(s) 517, 769, 1416
VpaK11BI GGWCC 3 cut(s) 265, 343, 1865
VspI ATTAAT 1 cut(s) 1347
XagI CCTNNNNNAGG 1 cut(s) 1872
XapI RAATTY 3 cut(s) 804, 1130, 1538
XceI RCATGY 2 cut(s) 548, 1651
XhoI CTCGAG 1 cut(s) 1315
XmiI GTMKAC 1 cut(s) 1140
XmnI GAANNNNTTC 1 cut(s) 805
XspI CTAG 3 cut(s) 77, 326, 962
Zsp2I ATGCAT 1 cut(s) 1405
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.